Sed0026895 (gene) Chayote v1

Overview


Name	Sed0026895
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
Location	LG05: 40211007 .. 40215263 (-)
RNA-Seq Expression	Sed0026895
Synteny	Sed0026895

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTGTTATGATTCTTCGAATGGTAACCGTTAGATTAAAGTATGATGAATTCCAAACAAAACCCACATTAATTCCAGTCCTACTTTCCAATCTCCATTGAATTTTATCTCCATGGACGAAAACTGAGAGAACCCATCGAACAGAAACTCTCCATTTCCATTTTCATGGTAAAAAAGAAGGTTACTTTTCAAACTGGCTACAACAAAATGTCTGGCCTATCAAATTTCTACCTTCTAACTTACAACTCCCTCCAAGCTTTTGGCTGGTATTTTTTCCTTTTAGTGTTTCATTTTTCTTCTTGTCTTTCTGTTGCTTTTCTTCATTATGGAGCTTTGTTGTTGGCATTGGCAGGGCGATTTCTCTTTATAGACTTCTAGCCAATTTTGCAGCCACCAAATCTATGAGTGGTGCTTATTCTTCTGCAGGAGAACTTATCTGTAAGTGTCTGCACCTCTGTTTGGTTTCTTGTAAAAGTTGTGGAATCTAATAGCAAATGTGGAAAATTTTGGGTTGGAAACCTTCTAGGTTGACTTAGTGGTGAAATAAGAGTTTATAAGTTAAATGCATAGTAGCCACTTACATATAAATTAATTTCTTAAAAATTATTTTGCAAACTAAAGGTAGGGTAAGAAGGTTGTCCGTGAAAATAGTTGAGATGCATACAAGACGGCCCAGATACTAAAAAAAACAAAAAAGAATGTGGGTTGAAACTCAATAATAATGTAGGCTGAATTTGATGAGAGAAGTACTTATATATGTTCTTTTTCTTTTAAGGTTTTGTGCAAACTGTTGCATTCTTGGAAATCATTCATGGAGCTGCTGGTAATTTAAATGAACTTTGATGTTGTTGTGTAGCTTGTTTGATATCTAAGTTTGATAAAGGTTGTGGTTTTTCCCTTTAAATGTCAGGTCTGGTGCCAACTGGAGTGTTGCTTCCTCTAATGCAATGGGGTGGGAGGGTTCATTTTCTGGTTGCAGTTGTTCGTCAACTTCAGGAGGTTCTCTCTTTCTCATTTTGTTGCATTCTTTTTGCTACATAGATGCAGTTTCTTGTTTGATATTTTCCAGAGAACTGTAAGAAATAGTGGAATAATTGTGCACTCAATTCTCTGTTATTAATGAACGCGTAGATATATAAACGCATTAGTGCTCTACTATGTCTTGTAAGAATAGTCGAGCTGCAAGTAAGTTGATTGGACACGGATGAATATTTTTTCTAAAAAATTCTCCACTGAGTTTCTGACTAATAATCAGCCATAACTATCATAACTAATACAAGTACTTAATAATTCCTTCTTTTTGTTTGACAGGTTCAACAGTTGCCTTCTGTTTTCATCACTTTCCTGGCTTGGAGCTTATCTGAGGTATGTTCTTTTATTTTTCCTTTAAATTTTGGTATGTTTGGCTTGCTGATCATTTCTATTGGTTTAGATTAATAAACAAAGAAAATTGGGTAATAAACAATCATACTTTTTTTAAAACAAATATTTGAGAACAAAATCATTATCAAAGGATGTTGATTTTAGATTTTGTTGTTTGTGATAGACTAGTAGCCAAAGTACCCAGTGATAAGATCCAAAATCTATATTGATATCAAATGATAAGAAGAAAACAAGATAAGCCAAGTTTTAATAAGAACTTGGAACCTGAGAATACTCTCTTGAGCCTACTAAGACTTCATTCGATATTTTTGGAAGACCCCTCCCTTCCTCAACCACTCTATTTATAACAAAATATCATAACAAACTCCCTATTATTTGCTAGTACCCTTCTAGTATCTCTAATTTCCCTCTACTGGCATTCCTATCACCAAGCTAGTCTATAGACAGATGGGTTTGGTAGGGCTGGGCTAGTGAGCAAGATAATTGTAACTTGGTATAAATATCAGAGATTTGACCTTGCTCTACTGAAATGTAGATAAAGTACATATTGATTAAACCTTAATGCAAGAGGTCATTTAAGACACTTTAAACTCTTCATGGTGTTGGTTGATTTCTTTTATGATAAAGTTAACTTATTGTTCAGGACTTAAACCTATGTCTTCTTAATGCAACCTATCTATCTGAAAAGAGAAAGGAAGAAAGAAAAAAAAATTTAATTGCAGACTCAAAGTAAAATGATATTTTGTACTTAACTATTTCCTTTTCTCTCTTTTCTGCTTATTTCTATTGGTTTATCCGGAGATTTATCTTTCTTCAAAGTGCAATTCCTTTCTCTTATGTTCTTTCCCACCTTTCAGATATTTTTCATCTTTATATGTTTTCTTTTTTCCTTTTTCACTTGGCTTTCTGGATTTTTACTATGATGAAATGAATTCAGGTTATCAGATATTCACATCATGCTTTGAATTGCTTGGGATTTTGCCCATTTTGGCTTACATATCTTAGGTACTTAACAAATATTCTTCTAAAGAAAACTACAATTATTCAAAATGAGAAAATTACTTAATATTTAAATTTGTGTTATTGTTTCTTACAGGTACACTGCATTCATAGTTCTCTATCCTATTGGAGTGACAATTGGTGAAAGTGAGTACACAATATCCAAATAATCTTGATTTCAACAATTTGACATATCTCAAGGGAGTCTTTAGTTCACAGGTCGGGTTTGTATAGTCTAGAGTTGTGGAGTTGAGCTCTGTGTCTTAACTTAGAGTTTTGATTGATAATGTTTTCGTTCCTACGTTTCTATTTTTCATTTTTAAGATACATGCTCGTTTGATAATAATTTAAATTTAAGAATTTGCAATACGAAACAGGAAATGAAAACAGTATCAAATGAGGCCCTATTTTTCTATATCCTACCCACCATATAAACTCAATCTTCTAAATATACTATATACACTCTCAAACCATATATATTTTATAACTGAGAATCAGATCTTTGCCTCACTATATCAGAAGGCGCGTGCGCGCATCCCAGGCCCTTAAACCATATATTTTTAATAATCACAAGCCTAAGAACCAAATATATGGTATACATAAACCTTGGTTCAAGAATTTATTCCTCTACACAATCTAAAGGCGAAGGCCAGTATGCTAACTTATGCAAAATGAACTATGCTTATTGAAACTGTGAGTTAACCATCCTTTCTTCCCTTTACCAATGTTATATTTTTACTTATTATAAAGCATTTGTGCAGTGTGGCTCATGTACCAAGCAATTCCATTTATGATAAAAGAGAACCTATATGCTGTTGCCTTTGCTTACTTTCCCTTGAGCTATTACAATACCATCAGGGTATGTTCAAACACTTGAGGAATTTTTTTTACCTGAAAGTGAGACCACTCCATATGTAATGATATCGACATGCTTATCTTCGAATCGAAATTTTTTTTTCAGGTTCTGCTTCTTGTCTACCCATTATTGTTCTTGAAACTATACCTGCATCTGTTCAAGCAAAGGAAGTCAAAATTGGGCAAGCAGCACAAGAAGAAGAGAAACTGAAGGTTGGGCCAAACTGGTATAATCTCCAGTAAACAATTTATTATCAAAAGTTTGAATAATTTAGAATGTTGTTAACGATCATGCTGAGGTTCTATTGATTTGTTTGATTTGATAGGTGTTTAATCTCATCAATTAACCTAAACCTTAAGTTCATAGTTATGATTAATTTAATGATATCAGTACTTTTAGACTCCTCTCACTTATGGGCTTGAAAATTTTGCATTATTAATCGGGGAGGAAAGACATTACACGGCTCGAAAACAAAACCTCCTACACTATGATATCATGTTAAATCTAATCAACCCAAAAGTTTTAGTGGGAGTGGATTGCGATAAATTTAATCTTATGTCAATACCTTAACAATAGCATTACAAAATATATTTGGTCCTTCACAAGATGGGGAATTTGATTCAATGGCATCAAGTGCTAGTCAATCTGCAGATAAACAAAGGAAAAAGGTTATAATGTTTTGGGTTCAATGACTCTGTTACATAATAAAATGCTTTTTTTGTTCAGACAAGATTATAATCTTCTCTCTTCCATCTACAGATACCAGAAAATCACAATCTAGAATGTTTTTTCCAGTGACCAGAATTAAGGTGAGAAAAGGCAGAGAAGTGTAAATTTATGAGCCATTCATGGTGACACTTAACTATGTTTCTATTTGTTGATTTTTCCACATTAAATTGACATCTGTTTCTAGATTCTACCAATCACCCACCAACAAGAACACTTTCTAATTAAACCATGATTGAAAGTGTAAGACTATGAGCCATTAAGAAGGCTTTTGGAAAACTAATCGGTAATGTGC

mRNA sequence

CCTGTTATGATTCTTCGAATGGTAACCGTTAGATTAAAGTATGATGAATTCCAAACAAAACCCACATTAATTCCAGTCCTACTTTCCAATCTCCATTGAATTTTATCTCCATGGACGAAAACTGAGAGAACCCATCGAACAGAAACTCTCCATTTCCATTTTCATGGTAAAAAAGAAGGTTACTTTTCAAACTGGCTACAACAAAATGTCTGGCCTATCAAATTTCTACCTTCTAACTTACAACTCCCTCCAAGCTTTTGGCTGGGCGATTTCTCTTTATAGACTTCTAGCCAATTTTGCAGCCACCAAATCTATGAGTGGTGCTTATTCTTCTGCAGGAGAACTTATCTGTTTTGTGCAAACTGTTGCATTCTTGGAAATCATTCATGGAGCTGCTGGTCTGGTGCCAACTGGAGTGTTGCTTCCTCTAATGCAATGGGGTGGGAGGGTTCATTTTCTGGTTGCAGTTGTTCGTCAACTTCAGGAGGTTCAACAGTTGCCTTCTGTTTTCATCACTTTCCTGGCTTGGAGCTTATCTGAGGTTATCAGATATTCACATCATGCTTTGAATTGCTTGGGATTTTGCCCATTTTGGCTTACATATCTTAGGTACACTGCATTCATAGTTCTCTATCCTATTGGAGTGACAATTGGTGAAATGTGGCTCATGTACCAAGCAATTCCATTTATGATAAAAGAGAACCTATATGCTGTTGCCTTTGCTTACTTTCCCTTGAGCTATTACAATACCATCAGGGTTCTGCTTCTTGTCTACCCATTATTGTTCTTGAAACTATACCTGCATCTGTTCAAGCAAAGGAAGTCAAAATTGGGCAAGCAGCACAAGAAGAAGAGAAACTGAAGATACCAGAAAATCACAATCTAGAATGTTTTTTCCAGTGACCAGAATTAAGGTGAGAAAAGGCAGAGAAGTGTAAATTTATGAGCCATTCATGGTGACACTTAACTATGTTTCTATTTGTTGATTTTTCCACATTAAATTGACATCTGTTTCTAGATTCTACCAATCACCCACCAACAAGAACACTTTCTAATTAAACCATGATTGAAAGTGTAAGACTATGAGCCATTAAGAAGGCTTTTGGAAAACTAATCGGTAATGTGC

Coding sequence (CDS)

ATGGTAAAAAAGAAGGTTACTTTTCAAACTGGCTACAACAAAATGTCTGGCCTATCAAATTTCTACCTTCTAACTTACAACTCCCTCCAAGCTTTTGGCTGGGCGATTTCTCTTTATAGACTTCTAGCCAATTTTGCAGCCACCAAATCTATGAGTGGTGCTTATTCTTCTGCAGGAGAACTTATCTGTTTTGTGCAAACTGTTGCATTCTTGGAAATCATTCATGGAGCTGCTGGTCTGGTGCCAACTGGAGTGTTGCTTCCTCTAATGCAATGGGGTGGGAGGGTTCATTTTCTGGTTGCAGTTGTTCGTCAACTTCAGGAGGTTCAACAGTTGCCTTCTGTTTTCATCACTTTCCTGGCTTGGAGCTTATCTGAGGTTATCAGATATTCACATCATGCTTTGAATTGCTTGGGATTTTGCCCATTTTGGCTTACATATCTTAGGTACACTGCATTCATAGTTCTCTATCCTATTGGAGTGACAATTGGTGAAATGTGGCTCATGTACCAAGCAATTCCATTTATGATAAAAGAGAACCTATATGCTGTTGCCTTTGCTTACTTTCCCTTGAGCTATTACAATACCATCAGGGTTCTGCTTCTTGTCTACCCATTATTGTTCTTGAAACTATACCTGCATCTGTTCAAGCAAAGGAAGTCAAAATTGGGCAAGCAGCACAAGAAGAAGAGAAACTGA

Protein sequence

MVKKKVTFQTGYNKMSGLSNFYLLTYNSLQAFGWAISLYRLLANFAATKSMSGAYSSAGELICFVQTVAFLEIIHGAAGLVPTGVLLPLMQWGGRVHFLVAVVRQLQEVQQLPSVFITFLAWSLSEVIRYSHHALNCLGFCPFWLTYLRYTAFIVLYPIGVTIGEMWLMYQAIPFMIKENLYAVAFAYFPLSYYNTIRVLLLVYPLLFLKLYLHLFKQRKSKLGKQHKKKRN

Homology

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BLAST of Sed0026895 vs. NCBI nr
Match: XP_038900764.1 (very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 [Benincasa hispida])

HSP 1 Score: 378.6 bits (971), Expect = 3.8e-101
Identity = 191/218 (87.61%), Postives = 200/218 (91.74%), Query Frame = 0


Query: 15  MSGLSNFYLLTYNSLQAFGWAISLYRLLANFAATKSMSGAYSSAGELICFVQTVAFLEII 74
           MS LSNFYLLTYNSLQA GW +SLYRL+ NFAATKS SGAYSS GEL+CF+Q  AFLEII
Sbjct: 1   MSRLSNFYLLTYNSLQALGWMVSLYRLVGNFAATKSTSGAYSSTGELVCFLQAAAFLEII 60

Query: 75  HGAAGLVPTGVLLPLMQWGGRVHFLVAVVRQLQEVQQLPSVFITFLAWSLSEVIRYSHHA 134
           HGA GLVPTGVLLPLMQWGGRVHF+VAVVRQL E+QQLPSVFITFLAWSLSEVIRYSHHA
Sbjct: 61  HGAVGLVPTGVLLPLMQWGGRVHFVVAVVRQLDEIQQLPSVFITFLAWSLSEVIRYSHHA 120

Query: 135 LNCLGFCPFWLTYLRYTAFIVLYPIGVTIGEMWLMYQAIPFMIKENLYAVAFAYFPLSYY 194
            NCLG CPFWLTYLRYTAFIVLYP GVTIGEMWLMYQAIPFM+K+NLYA  FAY P SYY
Sbjct: 121 FNCLGVCPFWLTYLRYTAFIVLYPTGVTIGEMWLMYQAIPFMVKKNLYADVFAYLPFSYY 180

Query: 195 NTIRVLLLVYPLLFLKLYLHLFKQRKSKLGKQHKKKRN 233
           N IRVLLLVYPLLFLKLYLHLFKQR+SKLGKQHKKKRN
Sbjct: 181 NFIRVLLLVYPLLFLKLYLHLFKQRRSKLGKQHKKKRN 218

[Close]

BLAST of Sed0026895 vs. NCBI nr
Match: XP_022947850.1 (very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 isoform X2 [Cucurbita moschata] >KAG6605485.1 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 376.7 bits (966), Expect = 1.4e-100
Identity = 195/218 (89.45%), Postives = 199/218 (91.28%), Query Frame = 0


Query: 15  MSGLSNFYLLTYNSLQAFGWAISLYRLLANFAATKSMSGAYSSAGELICFVQTVAFLEII 74
           MS LSNFYLLTYNSLQAFGW ISLYRLL +F ATKS SGAYSSAGELICF+QT AFLEII
Sbjct: 1   MSRLSNFYLLTYNSLQAFGWTISLYRLLDSFVATKSTSGAYSSAGELICFLQTAAFLEII 60

Query: 75  HGAAGLVPTGVLLPLMQWGGRVHFLVAVVRQLQEVQQLPSVFITFLAWSLSEVIRYSHHA 134
           HGA GLVPTGVLLPLMQWGGRVHFLVAVVRQL EVQQLPSVFITFLAWSLSEVIRYSHHA
Sbjct: 61  HGAIGLVPTGVLLPLMQWGGRVHFLVAVVRQLHEVQQLPSVFITFLAWSLSEVIRYSHHA 120

Query: 135 LNCLGFCPFWLTYLRYTAFIVLYPIGVTIGEMWLMYQAIPFMIKENLYAVAFAYFPLSYY 194
           LNCLG   FWLTYLRYTAFI+LYPIGVTIGEMWLMYQAIPFMIK NLYA AF Y P SYY
Sbjct: 121 LNCLGVSLFWLTYLRYTAFIILYPIGVTIGEMWLMYQAIPFMIKNNLYADAFGYLPFSYY 180

Query: 195 NTIRVLLLVYPLLFLKLYLHLFKQRKSKLGKQHKKKRN 233
           N I+VLL VYPL FLKLYLHLFKQRKSKLGKQHKKKRN
Sbjct: 181 NAIKVLLFVYPLFFLKLYLHLFKQRKSKLGKQHKKKRN 218

[Close]

BLAST of Sed0026895 vs. NCBI nr
Match: XP_023007027.1 (very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 isoform X2 [Cucurbita maxima])

HSP 1 Score: 375.6 bits (963), Expect = 3.2e-100
Identity = 194/218 (88.99%), Postives = 199/218 (91.28%), Query Frame = 0


Query: 15  MSGLSNFYLLTYNSLQAFGWAISLYRLLANFAATKSMSGAYSSAGELICFVQTVAFLEII 74
           MS LSNFYLLTYNS+QAFGW ISLYRLL NF ATKS SGAYSS GELICF+QT AFLEII
Sbjct: 1   MSRLSNFYLLTYNSVQAFGWTISLYRLLDNFVATKSTSGAYSSVGELICFLQTAAFLEII 60

Query: 75  HGAAGLVPTGVLLPLMQWGGRVHFLVAVVRQLQEVQQLPSVFITFLAWSLSEVIRYSHHA 134
           HGA GLVPTGVLLPLMQWGGRVHFLVAVVRQL EVQQLPSVFITFLAWSLSEVIRYSHHA
Sbjct: 61  HGAIGLVPTGVLLPLMQWGGRVHFLVAVVRQLHEVQQLPSVFITFLAWSLSEVIRYSHHA 120

Query: 135 LNCLGFCPFWLTYLRYTAFIVLYPIGVTIGEMWLMYQAIPFMIKENLYAVAFAYFPLSYY 194
           LNCLG   FWLTYLRYTAFI+LYPIGVTIGEMWLMYQAIPFMIK NLYA AF+Y P SYY
Sbjct: 121 LNCLGVGLFWLTYLRYTAFIILYPIGVTIGEMWLMYQAIPFMIKNNLYADAFSYLPFSYY 180

Query: 195 NTIRVLLLVYPLLFLKLYLHLFKQRKSKLGKQHKKKRN 233
           N I+VLL VYPL FLKLYLHLFKQRKSKLGKQHKKKRN
Sbjct: 181 NAIKVLLFVYPLFFLKLYLHLFKQRKSKLGKQHKKKRN 218

[Close]

BLAST of Sed0026895 vs. NCBI nr
Match: XP_022148455.1 (very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 [Momordica charantia])

HSP 1 Score: 374.4 bits (960), Expect = 7.1e-100
Identity = 191/218 (87.61%), Postives = 200/218 (91.74%), Query Frame = 0


Query: 15  MSGLSNFYLLTYNSLQAFGWAISLYRLLANFAATKSMSGAYSSAGELICFVQTVAFLEII 74
           MS LSN YLLTYNSLQAFGW ISLYRL+ +FAATKS  GAYSS GELICF+QT AFLEII
Sbjct: 1   MSRLSNSYLLTYNSLQAFGWTISLYRLVGSFAATKSTIGAYSSVGELICFLQTAAFLEII 60

Query: 75  HGAAGLVPTGVLLPLMQWGGRVHFLVAVVRQLQEVQQLPSVFITFLAWSLSEVIRYSHHA 134
           HGA GLVPTGVLLPLMQWGGRVHFL+AVVR+L EVQ LP VFITF+AWSLSEVIRYSHHA
Sbjct: 61  HGAVGLVPTGVLLPLMQWGGRVHFLIAVVRRLAEVQHLPYVFITFMAWSLSEVIRYSHHA 120

Query: 135 LNCLGFCPFWLTYLRYTAFIVLYPIGVTIGEMWLMYQAIPFMIKENLYAVAFAYFPLSYY 194
           LNCLG CPFWLTYLRYTAFIVLYPIGVTIGEMWLMYQAIPFMIK+NLYA  FAY PLSYY
Sbjct: 121 LNCLGVCPFWLTYLRYTAFIVLYPIGVTIGEMWLMYQAIPFMIKKNLYADVFAYLPLSYY 180

Query: 195 NTIRVLLLVYPLLFLKLYLHLFKQRKSKLGKQHKKKRN 233
           NTIRVLLLVYP  FLKLYLHLFKQR+SKLGKQH+KKRN
Sbjct: 181 NTIRVLLLVYPFFFLKLYLHLFKQRRSKLGKQHQKKRN 218

[Close]

BLAST of Sed0026895 vs. NCBI nr
Match: XP_008448368.1 (PREDICTED: very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 isoform X1 [Cucumis melo] >KAA0061952.1 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 isoform X1 [Cucumis melo var. makuwa] >TYK23978.1 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 373.6 bits (958), Expect = 1.2e-99
Identity = 189/218 (86.70%), Postives = 200/218 (91.74%), Query Frame = 0


Query: 15  MSGLSNFYLLTYNSLQAFGWAISLYRLLANFAATKSMSGAYSSAGELICFVQTVAFLEII 74
           MS LSN YLLTYNSLQ FGW +SLYRL+ +F ATKS SGAYSS GEL+CF+QT AFLE+I
Sbjct: 1   MSRLSNLYLLTYNSLQGFGWMVSLYRLVGDFVATKSTSGAYSSTGELVCFLQTAAFLEVI 60

Query: 75  HGAAGLVPTGVLLPLMQWGGRVHFLVAVVRQLQEVQQLPSVFITFLAWSLSEVIRYSHHA 134
           HGA GLVPTGVLLPLMQWGGRVHF+VAVVRQL E+QQLPSVFITFLAWSLSEVIRY HHA
Sbjct: 61  HGAVGLVPTGVLLPLMQWGGRVHFVVAVVRQLDEIQQLPSVFITFLAWSLSEVIRYFHHA 120

Query: 135 LNCLGFCPFWLTYLRYTAFIVLYPIGVTIGEMWLMYQAIPFMIKENLYAVAFAYFPLSYY 194
           LNCLG CPFWLTYLRYTAFIVLYPIGVTIGEMWLMYQAIPFMIK+NLYA  F Y PLSYY
Sbjct: 121 LNCLGVCPFWLTYLRYTAFIVLYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYY 180

Query: 195 NTIRVLLLVYPLLFLKLYLHLFKQRKSKLGKQHKKKRN 233
           N IRVLLLVYPLLFLKLYL+LFKQR+SKLGKQHKKKRN
Sbjct: 181 NFIRVLLLVYPLLFLKLYLYLFKQRRSKLGKQHKKKRN 218

[Close]

BLAST of Sed0026895 vs. ExPASy Swiss-Prot
Match: Q2KIP8 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 OS=Bos taurus OX=9913 GN=HACD2 PE=2 SV=2)

HSP 1 Score: 124.4 bits (311), Expect = 1.7e-27
Identity = 79/217 (36.41%), Postives = 126/217 (58.06%), Query Frame = 0


Query: 18  LSNFYLLTYNSLQAFGWAISLYRLLANFAATKSMSGAYSSAGELICFVQTVAFLEIIHGA 77
           L+  YL+ YN +   GW +    L+  + A  S    Y S  + + F QT A LEI+H A
Sbjct: 37  LTTAYLVIYNVVMTAGWLVIAVGLVRAYLAKGSYHSLYYSIEKPLKFFQTGALLEILHCA 96

Query: 78  AGLVPTGVLLPLMQWGGRVHFLVAVVRQLQEVQQLPSVFITFLAWSLSEVIRYSHHALNC 137
            G+VP+ V+L  +Q   RV  + AV   ++EVQ   SV +  +AW+++E+IRYS +  + 
Sbjct: 97  IGIVPSSVVLTSIQVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFSL 156

Query: 138 LGFCPFWLTYLRYTAFIVLYPIGVTIGEMWLMYQAIPFMIKENLYAVAFA---YFPLSYY 197
           L   P+ + + RYT FIVLYP+GV+ GE+  +Y A+PF+ +  LY+++      F   YY
Sbjct: 157 LNHLPYLIKWARYTLFIVLYPMGVS-GELLTIYAALPFVRQAGLYSISLPNKYNFSFDYY 216

Query: 198 NTIRVLLLVYPLLFLKLYLHLFKQRKSKLG--KQHKK 230
             + ++++ Y  LF +LY H+  QR+  L   ++HKK
Sbjct: 217 AFLILIMISYIPLFPQLYFHMIHQRRKILSHTEEHKK 252

[Close]

BLAST of Sed0026895 vs. ExPASy Swiss-Prot
Match: Q6Y1H2 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 OS=Homo sapiens OX=9606 GN=HACD2 PE=1 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 3.7e-27
Identity = 81/228 (35.53%), Postives = 129/228 (56.58%), Query Frame = 0


Query: 10  TGYNKMSG---LSNFYLLTYNSLQAFGWAISLYRLLANFAATKSMSGAYSSAGELICFVQ 69
           +G  K  G   L+  YL+ YN +   GW +    L+  + A  S    Y S  + + F Q
Sbjct: 26  SGTRKKKGPGPLATAYLVIYNVVMTAGWLVIAVGLVRAYLAKGSYHSLYYSIEKPLKFFQ 85

Query: 70  TVAFLEIIHGAAGLVPTGVLLPLMQWGGRVHFLVAVVRQLQEVQQLPSVFITFLAWSLSE 129
           T A LEI+H A G+VP+ V+L   Q   RV  + AV   ++EVQ   SV +  +AW+++E
Sbjct: 86  TGALLEILHCAIGIVPSSVVLTSFQVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITE 145

Query: 130 VIRYSHHALNCLGFCPFWLTYLRYTAFIVLYPIGVTIGEMWLMYQAIPFMIKENLYAVAF 189
           +IRYS +  + L   P+ + + RYT FIVLYP+GV+ GE+  +Y A+PF+ +  LY+++ 
Sbjct: 146 IIRYSFYTFSLLNHLPYLIKWARYTLFIVLYPMGVS-GELLTIYAALPFVRQAGLYSISL 205

Query: 190 A---YFPLSYYNTIRVLLLVYPLLFLKLYLHLFKQRKSKLG--KQHKK 230
                F   YY  + ++++ Y  +F +LY H+  QR+  L   ++HKK
Sbjct: 206 PNKYNFSFDYYAFLILIMISYIPIFPQLYFHMIHQRRKILSHTEEHKK 252

[Close]

BLAST of Sed0026895 vs. ExPASy Swiss-Prot
Match: Q5RBK3 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 OS=Pongo abelii OX=9601 GN=HACD2 PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 3.7e-27
Identity = 81/228 (35.53%), Postives = 129/228 (56.58%), Query Frame = 0


Query: 10  TGYNKMSG---LSNFYLLTYNSLQAFGWAISLYRLLANFAATKSMSGAYSSAGELICFVQ 69
           +G  K  G   L+  YL+ YN +   GW +    L+  + A  S    Y S  + + F Q
Sbjct: 27  SGTRKKKGPGPLATAYLVIYNVVMTAGWLVIAVGLVRAYLAKGSYHSLYYSIEKPLKFFQ 86

Query: 70  TVAFLEIIHGAAGLVPTGVLLPLMQWGGRVHFLVAVVRQLQEVQQLPSVFITFLAWSLSE 129
           T A LEI+H A G+VP+ V+L   Q   RV  + AV   ++EVQ   SV +  +AW+++E
Sbjct: 87  TGALLEILHCAIGIVPSSVVLTSFQVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITE 146

Query: 130 VIRYSHHALNCLGFCPFWLTYLRYTAFIVLYPIGVTIGEMWLMYQAIPFMIKENLYAVAF 189
           +IRYS +  + L   P+ + + RYT FIVLYP+GV+ GE+  +Y A+PF+ +  LY+++ 
Sbjct: 147 IIRYSFYTFSLLNHLPYLIKWARYTLFIVLYPMGVS-GELLTIYAALPFVRQAGLYSISL 206

Query: 190 A---YFPLSYYNTIRVLLLVYPLLFLKLYLHLFKQRKSKLG--KQHKK 230
                F   YY  + ++++ Y  +F +LY H+  QR+  L   ++HKK
Sbjct: 207 PNKYNFSFDYYAFLILIMISYIPIFPQLYFHMIHQRRKILSHTEEHKK 253

[Close]

BLAST of Sed0026895 vs. ExPASy Swiss-Prot
Match: Q9D3B1 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 OS=Mus musculus OX=10090 GN=Hacd2 PE=1 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 8.3e-27
Identity = 81/228 (35.53%), Postives = 128/228 (56.14%), Query Frame = 0


Query: 10  TGYNKMSG---LSNFYLLTYNSLQAFGWAISLYRLLANFAATKSMSGAYSSAGELICFVQ 69
           +G  K  G   ++  YL+ YN +   GW +    L+  + A  S    Y S    + F Q
Sbjct: 26  SGARKKKGPGPVATAYLVIYNVVMTAGWLVIAVGLVRAYLAKGSYHSLYYSIERPLKFFQ 85

Query: 70  TVAFLEIIHGAAGLVPTGVLLPLMQWGGRVHFLVAVVRQLQEVQQLPSVFITFLAWSLSE 129
           T A LEI+H A G+VP+ V+L   Q   RV  + AV   ++EVQ   SV +  +AW+++E
Sbjct: 86  TGALLEILHCAIGIVPSSVVLTSFQVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITE 145

Query: 130 VIRYSHHALNCLGFCPFWLTYLRYTAFIVLYPIGVTIGEMWLMYQAIPFMIKENLYAVAF 189
           +IRYS +  + L   P+ + + RYT FIVLYP+GVT GE+  +Y A+PF+ +  LY+++ 
Sbjct: 146 IIRYSFYTFSLLNHLPYIIKWARYTLFIVLYPMGVT-GELLTIYAALPFVRQAGLYSISL 205

Query: 190 A---YFPLSYYNTIRVLLLVYPLLFLKLYLHLFKQRKSKLG--KQHKK 230
                F   Y+  + ++++ Y  LF +LY H+  QR+  L   ++HKK
Sbjct: 206 PNKYNFSFDYHAFLILIMISYIPLFPQLYFHMIHQRRKVLSHTEEHKK 252

[Close]

BLAST of Sed0026895 vs. ExPASy Swiss-Prot
Match: Q9N1R5 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 1 OS=Ovis aries OX=9940 GN=HACD1 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 3.6e-22
Identity = 63/209 (30.14%), Postives = 111/209 (53.11%), Query Frame = 0


Query: 18  LSNFYLLTYNSLQAFGWAISLYRLLANFAATKSMSGAYSSAGELICFVQTVAFLEIIHGA 77
           L+  +L  YN     GW +    ++  +    +  G Y S  + + F QT A LEI+H  
Sbjct: 71  LATIWLTFYNIAMTAGWLVLAIAMVRFYMEKGTHKGLYKSIQKTLKFFQTFALLEIVHCL 130

Query: 78  AGLVPTGVLLPLMQWGGRVHFLVAVVRQLQEVQQLPSVFITFLAWSLSEVIRYSHHALNC 137
            G+VPT VL+  +Q   R+  +  V   ++ +Q   SV +  +AW+++E+ RYS +  + 
Sbjct: 131 IGIVPTSVLVAGVQVSSRIFMVWLVTHSIKPIQNEESVVLFLVAWTVTEITRYSFYTFSL 190

Query: 138 LGFCPFWLTYLRYTAFIVLYPIGVTIGEMWLMYQAIPFMIKENLYAVAFA---YFPLSYY 197
           L   P+++ + RY  FI+LYP+GV  GE+  +Y A+P++ K  ++++           YY
Sbjct: 191 LDHLPYFIKWARYNFFIILYPVGVA-GELLTIYAALPYVKKTGMFSIRLPNKYNVSFDYY 250

Query: 198 NTIRVLLLVYPLLFLKLYLHLFKQRKSKL 224
             + + +  Y  LF +LY H+ +QR+  L
Sbjct: 251 YFLLITMASYIPLFPQLYFHMLRQRRKVL 278

[Close]

BLAST of Sed0026895 vs. ExPASy TrEMBL
Match: A0A6J1G819 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Cucurbita moschata OX=3662 GN=LOC111451609 PE=3 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 6.9e-101
Identity = 195/218 (89.45%), Postives = 199/218 (91.28%), Query Frame = 0


Query: 15  MSGLSNFYLLTYNSLQAFGWAISLYRLLANFAATKSMSGAYSSAGELICFVQTVAFLEII 74
           MS LSNFYLLTYNSLQAFGW ISLYRLL +F ATKS SGAYSSAGELICF+QT AFLEII
Sbjct: 1   MSRLSNFYLLTYNSLQAFGWTISLYRLLDSFVATKSTSGAYSSAGELICFLQTAAFLEII 60

Query: 75  HGAAGLVPTGVLLPLMQWGGRVHFLVAVVRQLQEVQQLPSVFITFLAWSLSEVIRYSHHA 134
           HGA GLVPTGVLLPLMQWGGRVHFLVAVVRQL EVQQLPSVFITFLAWSLSEVIRYSHHA
Sbjct: 61  HGAIGLVPTGVLLPLMQWGGRVHFLVAVVRQLHEVQQLPSVFITFLAWSLSEVIRYSHHA 120

Query: 135 LNCLGFCPFWLTYLRYTAFIVLYPIGVTIGEMWLMYQAIPFMIKENLYAVAFAYFPLSYY 194
           LNCLG   FWLTYLRYTAFI+LYPIGVTIGEMWLMYQAIPFMIK NLYA AF Y P SYY
Sbjct: 121 LNCLGVSLFWLTYLRYTAFIILYPIGVTIGEMWLMYQAIPFMIKNNLYADAFGYLPFSYY 180

Query: 195 NTIRVLLLVYPLLFLKLYLHLFKQRKSKLGKQHKKKRN 233
           N I+VLL VYPL FLKLYLHLFKQRKSKLGKQHKKKRN
Sbjct: 181 NAIKVLLFVYPLFFLKLYLHLFKQRKSKLGKQHKKKRN 218

[Close]

BLAST of Sed0026895 vs. ExPASy TrEMBL
Match: A0A6J1KXE0 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Cucurbita maxima OX=3661 GN=LOC111499642 PE=3 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 1.5e-100
Identity = 194/218 (88.99%), Postives = 199/218 (91.28%), Query Frame = 0


Query: 15  MSGLSNFYLLTYNSLQAFGWAISLYRLLANFAATKSMSGAYSSAGELICFVQTVAFLEII 74
           MS LSNFYLLTYNS+QAFGW ISLYRLL NF ATKS SGAYSS GELICF+QT AFLEII
Sbjct: 1   MSRLSNFYLLTYNSVQAFGWTISLYRLLDNFVATKSTSGAYSSVGELICFLQTAAFLEII 60

Query: 75  HGAAGLVPTGVLLPLMQWGGRVHFLVAVVRQLQEVQQLPSVFITFLAWSLSEVIRYSHHA 134
           HGA GLVPTGVLLPLMQWGGRVHFLVAVVRQL EVQQLPSVFITFLAWSLSEVIRYSHHA
Sbjct: 61  HGAIGLVPTGVLLPLMQWGGRVHFLVAVVRQLHEVQQLPSVFITFLAWSLSEVIRYSHHA 120

Query: 135 LNCLGFCPFWLTYLRYTAFIVLYPIGVTIGEMWLMYQAIPFMIKENLYAVAFAYFPLSYY 194
           LNCLG   FWLTYLRYTAFI+LYPIGVTIGEMWLMYQAIPFMIK NLYA AF+Y P SYY
Sbjct: 121 LNCLGVGLFWLTYLRYTAFIILYPIGVTIGEMWLMYQAIPFMIKNNLYADAFSYLPFSYY 180

Query: 195 NTIRVLLLVYPLLFLKLYLHLFKQRKSKLGKQHKKKRN 233
           N I+VLL VYPL FLKLYLHLFKQRKSKLGKQHKKKRN
Sbjct: 181 NAIKVLLFVYPLFFLKLYLHLFKQRKSKLGKQHKKKRN 218

[Close]

BLAST of Sed0026895 vs. ExPASy TrEMBL
Match: A0A6J1D2Y7 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Momordica charantia OX=3673 GN=LOC111017094 PE=3 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 3.4e-100
Identity = 191/218 (87.61%), Postives = 200/218 (91.74%), Query Frame = 0


Query: 15  MSGLSNFYLLTYNSLQAFGWAISLYRLLANFAATKSMSGAYSSAGELICFVQTVAFLEII 74
           MS LSN YLLTYNSLQAFGW ISLYRL+ +FAATKS  GAYSS GELICF+QT AFLEII
Sbjct: 1   MSRLSNSYLLTYNSLQAFGWTISLYRLVGSFAATKSTIGAYSSVGELICFLQTAAFLEII 60

Query: 75  HGAAGLVPTGVLLPLMQWGGRVHFLVAVVRQLQEVQQLPSVFITFLAWSLSEVIRYSHHA 134
           HGA GLVPTGVLLPLMQWGGRVHFL+AVVR+L EVQ LP VFITF+AWSLSEVIRYSHHA
Sbjct: 61  HGAVGLVPTGVLLPLMQWGGRVHFLIAVVRRLAEVQHLPYVFITFMAWSLSEVIRYSHHA 120

Query: 135 LNCLGFCPFWLTYLRYTAFIVLYPIGVTIGEMWLMYQAIPFMIKENLYAVAFAYFPLSYY 194
           LNCLG CPFWLTYLRYTAFIVLYPIGVTIGEMWLMYQAIPFMIK+NLYA  FAY PLSYY
Sbjct: 121 LNCLGVCPFWLTYLRYTAFIVLYPIGVTIGEMWLMYQAIPFMIKKNLYADVFAYLPLSYY 180

Query: 195 NTIRVLLLVYPLLFLKLYLHLFKQRKSKLGKQHKKKRN 233
           NTIRVLLLVYP  FLKLYLHLFKQR+SKLGKQH+KKRN
Sbjct: 181 NTIRVLLLVYPFFFLKLYLHLFKQRRSKLGKQHQKKRN 218

[Close]

BLAST of Sed0026895 vs. ExPASy TrEMBL
Match: A0A5D3DKD0 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G00410 PE=3 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 5.9e-100
Identity = 189/218 (86.70%), Postives = 200/218 (91.74%), Query Frame = 0


Query: 15  MSGLSNFYLLTYNSLQAFGWAISLYRLLANFAATKSMSGAYSSAGELICFVQTVAFLEII 74
           MS LSN YLLTYNSLQ FGW +SLYRL+ +F ATKS SGAYSS GEL+CF+QT AFLE+I
Sbjct: 1   MSRLSNLYLLTYNSLQGFGWMVSLYRLVGDFVATKSTSGAYSSTGELVCFLQTAAFLEVI 60

Query: 75  HGAAGLVPTGVLLPLMQWGGRVHFLVAVVRQLQEVQQLPSVFITFLAWSLSEVIRYSHHA 134
           HGA GLVPTGVLLPLMQWGGRVHF+VAVVRQL E+QQLPSVFITFLAWSLSEVIRY HHA
Sbjct: 61  HGAVGLVPTGVLLPLMQWGGRVHFVVAVVRQLDEIQQLPSVFITFLAWSLSEVIRYFHHA 120

Query: 135 LNCLGFCPFWLTYLRYTAFIVLYPIGVTIGEMWLMYQAIPFMIKENLYAVAFAYFPLSYY 194
           LNCLG CPFWLTYLRYTAFIVLYPIGVTIGEMWLMYQAIPFMIK+NLYA  F Y PLSYY
Sbjct: 121 LNCLGVCPFWLTYLRYTAFIVLYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYY 180

Query: 195 NTIRVLLLVYPLLFLKLYLHLFKQRKSKLGKQHKKKRN 233
           N IRVLLLVYPLLFLKLYL+LFKQR+SKLGKQHKKKRN
Sbjct: 181 NFIRVLLLVYPLLFLKLYLYLFKQRRSKLGKQHKKKRN 218

[Close]

BLAST of Sed0026895 vs. ExPASy TrEMBL
Match: A0A1S3BJI8 (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Cucumis melo OX=3656 GN=LOC103490580 PE=3 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 5.9e-100
Identity = 189/218 (86.70%), Postives = 200/218 (91.74%), Query Frame = 0


Query: 15  MSGLSNFYLLTYNSLQAFGWAISLYRLLANFAATKSMSGAYSSAGELICFVQTVAFLEII 74
           MS LSN YLLTYNSLQ FGW +SLYRL+ +F ATKS SGAYSS GEL+CF+QT AFLE+I
Sbjct: 1   MSRLSNLYLLTYNSLQGFGWMVSLYRLVGDFVATKSTSGAYSSTGELVCFLQTAAFLEVI 60

Query: 75  HGAAGLVPTGVLLPLMQWGGRVHFLVAVVRQLQEVQQLPSVFITFLAWSLSEVIRYSHHA 134
           HGA GLVPTGVLLPLMQWGGRVHF+VAVVRQL E+QQLPSVFITFLAWSLSEVIRY HHA
Sbjct: 61  HGAVGLVPTGVLLPLMQWGGRVHFVVAVVRQLDEIQQLPSVFITFLAWSLSEVIRYFHHA 120

Query: 135 LNCLGFCPFWLTYLRYTAFIVLYPIGVTIGEMWLMYQAIPFMIKENLYAVAFAYFPLSYY 194
           LNCLG CPFWLTYLRYTAFIVLYPIGVTIGEMWLMYQAIPFMIK+NLYA  F Y PLSYY
Sbjct: 121 LNCLGVCPFWLTYLRYTAFIVLYPIGVTIGEMWLMYQAIPFMIKKNLYADVFDYLPLSYY 180

Query: 195 NTIRVLLLVYPLLFLKLYLHLFKQRKSKLGKQHKKKRN 233
           N IRVLLLVYPLLFLKLYL+LFKQR+SKLGKQHKKKRN
Sbjct: 181 NFIRVLLLVYPLLFLKLYLYLFKQRRSKLGKQHKKKRN 218

[Close]

BLAST of Sed0026895 vs. TAIR 10
Match: AT5G59770.1 (Protein-tyrosine phosphatase-like, PTPLA )

HSP 1 Score: 218.8 bits (556), Expect = 4.6e-57
Identity = 111/194 (57.22%), Postives = 147/194 (75.77%), Query Frame = 0


Query: 35  AISLYRLLANFAATKSMSGAYSSAGELICFVQTVAFLEIIHGAAGLVPTGVLLPLMQWGG 94
           AISL  +L +F + K++  AY+SAG LI   QT A LE++HGA G+VP+G L PLMQW G
Sbjct: 72  AISLLIILNSFLSNKTIISAYASAGFLISLFQTAAILEVLHGAIGIVPSGFLSPLMQWSG 131

Query: 95  RVHFLVAVVRQLQEVQQLPSVFITFLAWSLSEVIRYSHHALNCLGFCPFWLTYLRYTAFI 154
           R HF++A+V Q++EVQ  P + IT +AW + E+IRY H+A  CLG CP+WLTYLRYT FI
Sbjct: 132 RTHFILAIVGQIKEVQDSPWLSITLVAWCIGEMIRYPHYAFTCLGRCPYWLTYLRYTGFI 191

Query: 155 VLYPIGVTIGEMWLMYQAIPFMIKENLYAVAFAYFPLSYYNTIRVLLLVYPLLFLKLYLH 214
           V+YP G+ +GE+ +MY+A+P++ + NLYA  F+ FP SYY+ +  +LLVYP L+LKLYL 
Sbjct: 192 VIYPTGL-VGELLIMYKALPYVKERNLYANFFSVFPFSYYDFLWAVLLVYPFLWLKLYLQ 251

Query: 215 LFKQRKSKLGKQHK 229
           LFKQRKSKLGK  K
Sbjct: 252 LFKQRKSKLGKSKK 264

[Close]

BLAST of Sed0026895 vs. TAIR 10
Match: AT5G10480.1 (Protein-tyrosine phosphatase-like, PTPLA )

HSP 1 Score: 89.0 bits (219), Expect = 5.6e-18
Identity = 68/219 (31.05%), Postives = 108/219 (49.32%), Query Frame = 0


Query: 15  MSGLSNFYLLTYNSLQAFGWAISLYRLLANFAATKSMSGAYSSAGELICFVQTVAFLEII 74
           +S +   YL  YN +   GWA  LY  +     T      Y +  + +   QT A LEI+
Sbjct: 5   LSVVRRVYLTLYNWIVFAGWAQVLYLAITTLKET-GYENVYDAIEKPLQLAQTAAVLEIL 64

Query: 75  HGAAGLVPTGVLLPLMQWGGRVHFLVAVVRQLQEVQQLPSVFITFLAWSLSEVIRYSHHA 134
           HG  GLV + V   L Q G R+     ++    EV+    V    ++WS++E+IRYS   
Sbjct: 65  HGLVGLVRSPVSATLPQIGSRLFLTWGILYSFPEVRSHFLVTSLVISWSITEIIRYSFFG 124

Query: 135 L-NCLGFCPFWLTYLRYTAFIVLYPIGVTIGEMWLMYQAIPFMIKENLYAVA---FAYFP 194
               LGF P W  +LRY++F++LYP G+T  E+ L+Y A+P +    +Y+V       F 
Sbjct: 125 FKEALGFAPSWHLWLRYSSFLLLYPTGIT-SEVGLIYLALPHIKTSEMYSVRMPNILNFS 184

Query: 195 LSYYNTIRVLLLVYPLLFLKLYLHLFKQRKSKLGKQHKK 230
             ++    ++L +Y      +Y ++  QRK  L K  ++
Sbjct: 185 FDFFYATILVLAIYVPGSPHMYRYMLGQRKRALSKSKRE 221

[Close]

BLAST of Sed0026895 vs. TAIR 10
Match: AT5G10480.3 (Protein-tyrosine phosphatase-like, PTPLA )

HSP 1 Score: 81.3 bits (199), Expect = 1.2e-15
Identity = 68/228 (29.82%), Postives = 108/228 (47.37%), Query Frame = 0


Query: 15  MSGLSNFYLLTYNSLQAFGWAISLYRLLANFAATKSMSGAYSSAGELICFVQTVAFLEII 74
           +S +   YL  YN +   GWA  LY  +     T      Y +  + +   QT A LEI+
Sbjct: 5   LSVVRRVYLTLYNWIVFAGWAQVLYLAITTLKET-GYENVYDAIEKPLQLAQTAAVLEIL 64

Query: 75  HGAAGLVPTGVLLPLMQWGGRVHFLVAVVRQLQEVQQLPSVFITFLAWSLS--------- 134
           HG  GLV + V   L Q G R+     ++    EV+    V    ++WS++         
Sbjct: 65  HGLVGLVRSPVSATLPQIGSRLFLTWGILYSFPEVRSHFLVTSLVISWSITEFPITTWIV 124

Query: 135 EVIRYSHHAL-NCLGFCPFWLTYLRYTAFIVLYPIGVTIGEMWLMYQAIPFMIKENLYAV 194
           E+IRYS       LGF P W  +LRY++F++LYP G+T  E+ L+Y A+P +    +Y+V
Sbjct: 125 EIIRYSFFGFKEALGFAPSWHLWLRYSSFLLLYPTGIT-SEVGLIYLALPHIKTSEMYSV 184

Query: 195 A---FAYFPLSYYNTIRVLLLVYPLLFLKLYLHLFKQRKSKLGKQHKK 230
                  F   ++    ++L +Y      +Y ++  QRK  L K  ++
Sbjct: 185 RMPNILNFSFDFFYATILVLAIYVPGSPHMYRYMLGQRKRALSKSKRE 230

[Close]

BLAST of Sed0026895 vs. TAIR 10
Match: AT5G10480.2 (Protein-tyrosine phosphatase-like, PTPLA )

HSP 1 Score: 79.3 bits (194), Expect = 4.4e-15
Identity = 57/179 (31.84%), Postives = 93/179 (51.96%), Query Frame = 0


Query: 55  YSSAGELICFVQTVAFLEIIHGAAGLVPTGVLLPLMQWGGRVHFLVAVVRQLQEVQQLPS 114
           Y +  + +   QT A LEI+HG  GLV + V   L Q G R+     ++    EV+    
Sbjct: 19  YDAIEKPLQLAQTAAVLEILHGLVGLVRSPVSATLPQIGSRLFLTWGILYSFPEVRSHFL 78

Query: 115 VFITFLAWSLSEVIRYSHHAL-NCLGFCPFWLTYLRYTAFIVLYPIGVTIGEMWLMYQAI 174
           V    ++WS++E+IRYS       LGF P W  +LRY++F++LYP G+T  E+ L+Y A+
Sbjct: 79  VTSLVISWSITEIIRYSFFGFKEALGFAPSWHLWLRYSSFLLLYPTGIT-SEVGLIYLAL 138

Query: 175 PFMIKENLYAVA---FAYFPLSYYNTIRVLLLVYPLLFLKLYLHLFKQRKSKLGKQHKK 230
           P +    +Y+V       F   ++    ++L +Y      +Y ++  QRK  L K  ++
Sbjct: 139 PHIKTSEMYSVRMPNILNFSFDFFYATILVLAIYVPGSPHMYRYMLGQRKRALSKSKRE 196

The following BLAST results are available for this feature:

BLAST of Sed0026895 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900764.1	3.8e-101	87.61	very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 [Benincasa hispida]	[more]
XP_022947850.1	1.4e-100	89.45	very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 isoform X2 [Cucurbita mosch...	[more]
XP_023007027.1	3.2e-100	88.99	very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 isoform X2 [Cucurbita maxim...	[more]
XP_022148455.1	7.1e-100	87.61	very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 [Momordica charantia]	[more]
XP_008448368.1	1.2e-99	86.70	PREDICTED: very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 isoform X1 [Cucu...	[more]

BLAST of Sed0026895 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2KIP8	1.7e-27	36.41	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 OS=Bos taurus OX=9913 GN=HA...	[more]
Q6Y1H2	3.7e-27	35.53	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 OS=Homo sapiens OX=9606 GN=...	[more]
Q5RBK3	3.7e-27	35.53	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 OS=Pongo abelii OX=9601 GN=...	[more]
Q9D3B1	8.3e-27	35.53	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 OS=Mus musculus OX=10090 GN...	[more]
Q9N1R5	3.6e-22	30.14	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 1 OS=Ovis aries OX=9940 GN=HA...	[more]

BLAST of Sed0026895 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G819	6.9e-101	89.45	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Cucurbita moschata OX=3662...	[more]
A0A6J1KXE0	1.5e-100	88.99	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1D2Y7	3.4e-100	87.61	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Momordica charantia OX=367...	[more]
A0A5D3DKD0	5.9e-100	86.70	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Cucumis melo var. makuwa O...	[more]
A0A1S3BJI8	5.9e-100	86.70	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase OS=Cucumis melo OX=3656 GN=LO...	[more]

BLAST of Sed0026895 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59770.1	4.6e-57	57.22	Protein-tyrosine phosphatase-like, PTPLA	[more]
AT5G10480.1	5.6e-18	31.05	Protein-tyrosine phosphatase-like, PTPLA	[more]
AT5G10480.3	1.2e-15	29.82	Protein-tyrosine phosphatase-like, PTPLA	[more]
AT5G10480.2	4.4e-15	31.84	Protein-tyrosine phosphatase-like, PTPLA	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007482	Protein-tyrosine phosphatase-like, PTPLA	PFAM	PF04387	PTPLA	coord: 66..225 e-value: 1.1E-44 score: 152.0
IPR007482	Protein-tyrosine phosphatase-like, PTPLA	PANTHER	PTHR11035	PTPLA DOMAIN PROTEIN	coord: 18..229
None	No IPR available	PANTHER	PTHR11035:SF35	VERY-LONG-CHAIN (3R)-3-HYDROXYACYL-COA DEHYDRATASE	coord: 18..229

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0026895.1	Sed0026895.1	mRNA
Sed0026895.2	Sed0026895.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030497	fatty acid elongation
biological_process	GO:0030148	sphingolipid biosynthetic process
biological_process	GO:0042761	very long-chain fatty acid biosynthetic process
cellular_component	GO:0030176	integral component of endoplasmic reticulum membrane
molecular_function	GO:0018812	3-hydroxyacyl-CoA dehydratase activity
molecular_function	GO:0102343	3-hydroxy-arachidoyl-CoA dehydratase activity
molecular_function	GO:0102344	3-hydroxy-behenoyl-CoA dehydratase activity
molecular_function	GO:0102345	3-hydroxy-lignoceroyl-CoA dehydratase activity
molecular_function	GO:0102158	very-long-chain 3-hydroxyacyl-CoA dehydratase activity