Sed0026890 (gene) Chayote v1

Overview


Name	Sed0026890
Type	gene
Organism	Sechium edule (Chayote v1)
Description	ATP-dependent Clp protease proteolytic subunit
Location	LG04: 8158020 .. 8162676 (-)
RNA-Seq Expression	Sed0026890
Synteny	Sed0026890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAACTTTCCCGAATTTGTTATTTTACGCATTTCTCGCCCAACCAAATCCCCAAAACTCATCGTCTCAAAGCACAGAGCAGTGGTAAATCCATGGAGCTTCTTTCACGCTGTTCTTCTCTTCTTCCTCACGCATCCCCTCTCGGCCTTCCAAATTCTCATGGAAAACCTTCAAATTTCTACCCAAAGCTCAAATCCAGCCTCTCCTTTCCTTCCTCTTCTTCGCCAGTCCTCAAATCTGCCAGAACCCTAGCTCCGCCGCGCTCCGTCGTCATGTCCGCTCCTCAGACGCCGGATTCCGCCCGGAGAGGCGCCGAGACGGACGCCATGGGGCTGCTTCTCCGGGAGAGGATCGTCTTCTTGGGGACCAGCATTGATGACTTTGTGGCCGATGCCATTATGAGCCAGCTCCTGCTCTTGGATGCTCAGGATTCTACTAAGGATATCAGGCTCTTCATCAACTCCACCGGCGGCTCTCTCAGGTATACTACCACTGATTCTTTTTTTTGGTACTTGATTGAATTTATATGCATACTTTGCTTAATTTTCATGTGAAATGAGTTTGTTTGGTTTCTTTAGCATTGTTAATGTAAAACTCACAGTTCTCTGTAGAAGAGGTCTAGTTTTATTCACCTGCATCACAAACATTTAATCTACTACTGGGTTTATCAGTTATGGGGATGAGCGAGTCAGGTTACTGGAAATATTTGGGCCCCGTTTGGTAACCATTTTGTTTTTTGTTTTTTGTTTATGAAATTTAAGCTTATTTCTATTCAAATTTACTACCATGTGCTCCATCTTTTCTATAATGTATTCATCTTTCCTTAAGAAAGTAAGAGAATCCTAACCAAATTTAAAAAACATAAACAATTTTTTGGAAGCTACTATTTTTTGTTTACAAATTTTGGTTTTGTTTATTAAAATATAAGTAAGATGTAGATATTCAAATAAGGAAAAATGTATAGTAAGATAATTGTTGTAGGCTTAAATTTCATAAACAAAAAAGGAAAAACAAAATGGTTATCAAATGGGGCCTTAGGATTTGTTACAGTTTACTCAAATTCATATTGAAAATTATTTTTAACTTGGAGCAATACTCGTGTAGTATAAAGTGTGCTATCATAGAAATGGTTCTTTTAGGTCAGCGGGTGTGACTATTCTCATGAAACATAAGGCCGGACTGCATGATATTTGAATGTAAAGGAAACCCAATTATTTACTAGATAGGTGGCTACTATGAATTGAATCCTTAAACCTCTTACCTCCTCAACACCCTCTTTGACCTACCGATGAAATTTTTAAAATTAGGAATGCTTCTGAATGATGAAAGTTATATAGCATTCAACATTTAAATTGTTTATAATTTGAAAGAACTGATTGTTGAGTGTTAATCTTCCTTGTTAGTTGCTACATAGAACTAGGCCGGTTTTCTTATTTCCTTGGGTGGCTTGGGAGTTGGAAATGTGAGAACTAAAAGCTGGATGTGCTGTGTTCACGTTCTTGTGTGAAAAGCACGCCCTTAGAAGAGGCTTATTCAAGTGTCAAAATGGGATTGGTAACCTCTGGAGAAACTTTGGTCCTAGAATTGACATTGCTAAACTAGAGATTTCTCCAAACACTGTGTCATTCTTCTAGAATGGCAATGGTCGGAGAAATAAATTTTGGGCAAACGTCTTGCTTGATCCTTCTAGTCTAAGCCTGATTTTCCTAAAAATAAATATACTCCTTTTCAAATGCTGAATGTTTTTTTAAAGAGGTTTTGGGAATGAGTCAGTCTAAACTTGAGAACCAGAAAAAGAGTAAACACTTGTAATTTGATTCAAAAGATGAACTCTTTCATGGCTTTATCTTTTTCTTTTTGCCCTGCTTATCTAACGAAGAAACCTTGGGCCACCTTTAATCTATTTAGCAATGCAATATGTTGCATAAACGACCAATTTTCCAAATCAGTATCCTTTGGGAAAGGGCTAACCCTTCTCATAATAGCATGGGCAGATCGGATTTTTTTCCAACAATTAACGATCCAGGTTTCTTGTTCTTTCCCTGTGACATTCTCAGTTGCAGGGCAGATGATAAAGCGTAGAGGTAGTGGAGGTTTGAAGATACCAAACTTTGCCTAATTACTGAAGTATGGTAGTGATGCCTCAATTGTCCATCTTCCTTTTTCCTTTGTGGTATCTTTTGAATGACTTGCTAGGAGTCGTGAAAAAAATTTGAGAAGTAGAAGTGTGATAGAATTTCTATGAAGGGATATATTAGTAATTAGTTAGTGAATTTATTAGGGATTTTGGTTATAAATAGAGGGTGTGGGGAGTAATGTAGGCATTATTTAGTGGTGAACTGAGGTTTGAGAATGATCTCAAAAGAGATGATCCAAGTATCTTGAACACTTGGTTATCTTGTAATTTCGTCGTTACTTGTATATCACGTGTTATGGGTTCTATCATAATCCAAACCCAGTCTTCCAGTTATCTACCAAACAGATTCCTTTTCAGCCCGATATCCCAAGTTTGGGTGTCTTCTTTTCCTTTCTAGCAATCGCTCTCTACCTCACCTTTTGTACTAGCAATGCGGAGTAGATAAATATATTATGAAATATCTGGCTTAAAGGTGGAACTAAATCGGTTATCTTTCTAGATTGTAATTCTAAGCCCATTTTCCATTGTGTAAAGCACAACCGCACTTAGCTAGATCAGGCCAGGGGCAGAAGGCAGAATAGATTACATGGTTTTATTTGTTTTCTGACTCCCAGGACTTATTTTAGAAATGGGTGTGTCATCGTTATAAGCATACGAATTCTTGTGCTGTGAATCCATTATGGAATCTATCATTTTTCTTGCTATGAATTGGCGCACAGGATCTTTCATGAGAAGGAGTCTCTCTTTTGGATGGTTTTAGATAAAGTAACATATTTGGTGGCTTATTGGCTCAAAAACTCTTCTATGTTCTCTGATTATGACTTTTTTACCCTCCTTTATAATTGGAGAGGCCTTTTGTAATTGTATGATGTATTGCCTTTATGGCTTAATTTCATATATCAATGAAATCGTTTCTTATCCCAAAAAAAAAAAAAAAGAATTGGTGCACAGTGTCACTCCTTTTAAGGATTGTAGCCTTTCTTCTCTTATTTTGCATTGGAGTGATTTTTTATAATCATTATTAATAGGTCTTCTTTTCTAACTCTTCGTTCATCCATAAAAATTCCGTTTCCTATAAAAAAAATGAGCAAAACTTGAGTACTTACCAACAAGTACCCAAAGGTGCTTACCCCATCACATTGTGGGGCTTAAAAACAGCCACATTGCACACTTAAAAAAAAGTTGGAAAGAGAAAAATTAAAAAGAAAAAAAAGTAAGGTGGCAAATTTGTACCTCATATGAGTGGGTAAGCATCTTTGGGCACTTGTTGGTAAGTACCCAAGTTTTGCTCTTCTATCATACCAACTCTCTTGTTATTATTTATTTTTTGAAACAAGGGTAACTATGCCCGCCCCTAAGCCAGGCATCGGAGACATCGAAGGAGTCATGTCACAAGTGAGTCTCGAACCCGGGATCTTGAGAGAAGCATACTCTCAAAATCCAAATTTTCAAACACTGCACTACCCTTTGGGGATTCTTGTTATTATTTATTTGAAGCTGGAAGTACAGATTTGATAGGTTTTCGATACATATATATACACGTATTTCTATTTTCTGCTCATCTTTCTTCTGTCTTGGAAATTTAGGATAGGAGGACGTCCAATTTCAATGAGTGGCACCTGATCTTATCTATTTATGCACTGCACTCATTAGCATTTTCACATTGGTCAACTTTAGCCGCTATTTGGTGATTGGTTGCATTACATTAACCCTGACTATTTCCTTCTATTGATGTTGTTTTGAGTAGTGCTACAATGGCTATCTACGATGTCGTACAGCTCGTGAGGGCTGATGTCTCCACTATTGCACTAGGAATCGCGGCCTCAACTGCTTCCATAATCCTCGGCGGTGGAACTAAAGGGAAGCGTCTCGCAATGCCTAATGCACGTATTATGGTACATCAACCCCTTGGAGGGGCAAGTGGGCAAGCAATAGATGTGGAAATTCAAGCTCGTGAAATCATGCATAACAAGAACAACATAACAAGAATCATCTCCGAATTCACTGGCCATCCATTTGAAAAAGTCCAGAAAGATATTGATAGGGATCGTTATATGTCGCCCATGGAGGCTGTAGAATATGGATTGATTGATGGGGTGATCGACAAAGACAGCATTATACCTCTCGCGCCAGTGCCAGAAAGAGTGAAGGCAAGTTTAAATTATGAAGAAATTATTAAAGATCCAAGGAAATTCTTGACACCAGATATCCCCGACGACGAGATTTACTAGTTTCGAGCATTTCGGCAGACCATTTTCTAGGCTTTTGATTGATTTGATTCACATGTAGTAGAATCTTGTGTAAGCAAAGTCATGGTAAGTGGAACTCACAAATATGCTGGAACTTGATGTCCTCAGCTTTAGAGTAACAACTTTGAGCAAAATGTTTTGAACCCTTTTGTCTATTACAATTACAAATTAGCATTCGGAGTAAAAAAAACAAATGGCATTGAATAATCTTTTGTATTGGGCAGTGCTTTGTCTGATCAGAAACTCAAATGTACAGGCACTGCTTTGCTGCC

mRNA sequence

AAAACTTTCCCGAATTTGTTATTTTACGCATTTCTCGCCCAACCAAATCCCCAAAACTCATCGTCTCAAAGCACAGAGCAGTGGTAAATCCATGGAGCTTCTTTCACGCTGTTCTTCTCTTCTTCCTCACGCATCCCCTCTCGGCCTTCCAAATTCTCATGGAAAACCTTCAAATTTCTACCCAAAGCTCAAATCCAGCCTCTCCTTTCCTTCCTCTTCTTCGCCAGTCCTCAAATCTGCCAGAACCCTAGCTCCGCCGCGCTCCGTCGTCATGTCCGCTCCTCAGACGCCGGATTCCGCCCGGAGAGGCGCCGAGACGGACGCCATGGGGCTGCTTCTCCGGGAGAGGATCGTCTTCTTGGGGACCAGCATTGATGACTTTGTGGCCGATGCCATTATGAGCCAGCTCCTGCTCTTGGATGCTCAGGATTCTACTAAGGATATCAGGCTCTTCATCAACTCCACCGGCGGCTCTCTCAGTGCTACAATGGCTATCTACGATGTCGTACAGCTCGTGAGGGCTGATGTCTCCACTATTGCACTAGGAATCGCGGCCTCAACTGCTTCCATAATCCTCGGCGGTGGAACTAAAGGGAAGCGTCTCGCAATGCCTAATGCACGTATTATGGTACATCAACCCCTTGGAGGGGCAAGTGGGCAAGCAATAGATGTGGAAATTCAAGCTCGTGAAATCATGCATAACAAGAACAACATAACAAGAATCATCTCCGAATTCACTGGCCATCCATTTGAAAAAGTCCAGAAAGATATTGATAGGGATCGTTATATGTCGCCCATGGAGGCTGTAGAATATGGATTGATTGATGGGGTGATCGACAAAGACAGCATTATACCTCTCGCGCCAGTGCCAGAAAGAGTGAAGGCAAGTTTAAATTATGAAGAAATTATTAAAGATCCAAGGAAATTCTTGACACCAGATATCCCCGACGACGAGATTTACTAGTTTCGAGCATTTCGGCAGACCATTTTCTAGGCTTTTGATTGATTTGATTCACATGTAGTAGAATCTTGTGTAAGCAAAGTCATGGTAAGTGGAACTCACAAATATGCTGGAACTTGATGTCCTCAGCTTTAGAGTAACAACTTTGAGCAAAATGTTTTGAACCCTTTTGTCTATTACAATTACAAATTAGCATTCGGAGTAAAAAAAACAAATGGCATTGAATAATCTTTTGTATTGGGCAGTGCTTTGTCTGATCAGAAACTCAAATGTACAGGCACTGCTTTGCTGCC

Coding sequence (CDS)

ATGGAGCTTCTTTCACGCTGTTCTTCTCTTCTTCCTCACGCATCCCCTCTCGGCCTTCCAAATTCTCATGGAAAACCTTCAAATTTCTACCCAAAGCTCAAATCCAGCCTCTCCTTTCCTTCCTCTTCTTCGCCAGTCCTCAAATCTGCCAGAACCCTAGCTCCGCCGCGCTCCGTCGTCATGTCCGCTCCTCAGACGCCGGATTCCGCCCGGAGAGGCGCCGAGACGGACGCCATGGGGCTGCTTCTCCGGGAGAGGATCGTCTTCTTGGGGACCAGCATTGATGACTTTGTGGCCGATGCCATTATGAGCCAGCTCCTGCTCTTGGATGCTCAGGATTCTACTAAGGATATCAGGCTCTTCATCAACTCCACCGGCGGCTCTCTCAGTGCTACAATGGCTATCTACGATGTCGTACAGCTCGTGAGGGCTGATGTCTCCACTATTGCACTAGGAATCGCGGCCTCAACTGCTTCCATAATCCTCGGCGGTGGAACTAAAGGGAAGCGTCTCGCAATGCCTAATGCACGTATTATGGTACATCAACCCCTTGGAGGGGCAAGTGGGCAAGCAATAGATGTGGAAATTCAAGCTCGTGAAATCATGCATAACAAGAACAACATAACAAGAATCATCTCCGAATTCACTGGCCATCCATTTGAAAAAGTCCAGAAAGATATTGATAGGGATCGTTATATGTCGCCCATGGAGGCTGTAGAATATGGATTGATTGATGGGGTGATCGACAAAGACAGCATTATACCTCTCGCGCCAGTGCCAGAAAGAGTGAAGGCAAGTTTAAATTATGAAGAAATTATTAAAGATCCAAGGAAATTCTTGACACCAGATATCCCCGACGACGAGATTTACTAG

Protein sequence

MELLSRCSSLLPHASPLGLPNSHGKPSNFYPKLKSSLSFPSSSSPVLKSARTLAPPRSVVMSAPQTPDSARRGAETDAMGLLLRERIVFLGTSIDDFVADAIMSQLLLLDAQDSTKDIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPMEAVEYGLIDGVIDKDSIIPLAPVPERVKASLNYEEIIKDPRKFLTPDIPDDEIY

Homology

[Close]

BLAST of Sed0026890 vs. NCBI nr
Match: XP_022145352.1 (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Momordica charantia])

HSP 1 Score: 500.7 bits (1288), Expect = 8.2e-138
Identity = 264/294 (89.80%), Postives = 275/294 (93.54%), Query Frame = 0


Query: 1   MELLSRCSSLLPHASPLGLPNSHGKPSNFYPKLKSSLSFPSSSS----PVLKSARTLAPP 60
           MELLSRCS+L+PHAS L LPNSH KPSNFYPKLKSSLSFPS+ S      LK +RTLA P
Sbjct: 1   MELLSRCSTLIPHASSLSLPNSHPKPSNFYPKLKSSLSFPSACSVLKATALKPSRTLASP 60

Query: 61  RSVVMSAPQTPDSARRGAETDAMGLLLRERIVFLGTSIDDFVADAIMSQLLLLDAQDSTK 120
            SV+M+APQTPD ARRGAETDAMGLLLRERIVFLG SIDDFVADAI+SQLLLLDAQDSTK
Sbjct: 61  CSVLMTAPQTPDVARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120

Query: 121 DIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180
           DIRLFINS GGSLSATMAIYDVVQLVRADVSTI LGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 121 DIRLFINSPGGSLSATMAIYDVVQLVRADVSTIGLGIAASTASIILGGGTKGKRLAMPNA 180

Query: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPM 240
           RIMVHQPLGGASGQAIDVEIQAREIMHNKNN+TRIISEFTGHPF+KVQKDIDRDRYMSP+
Sbjct: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPI 240

Query: 241 EAVEYGLIDGVIDKDSIIPLAPVPERVKASLNYEEIIKDPRKFLTPDIPDDEIY 291
           EAVEYGLIDGVIDKDSIIPL PVPERVKASLNYEEI KDPRKFLTPD+PDDEIY
Sbjct: 241 EAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 294

[Close]

BLAST of Sed0026890 vs. NCBI nr
Match: XP_038876611.1 (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Benincasa hispida])

HSP 1 Score: 499.6 bits (1285), Expect = 1.8e-137
Identity = 263/294 (89.46%), Postives = 276/294 (93.88%), Query Frame = 0


Query: 1   MELLSRCSSLLPHASPLGLPNSHGKPSNFYPKLKSSLSFPSSSSPVL----KSARTLAPP 60
           MELLSRCS+LLPHAS +GLP SHGKPSNF PKLKS+LSFPS+SS +     K +RT APP
Sbjct: 1   MELLSRCSTLLPHASSIGLPTSHGKPSNFLPKLKSTLSFPSASSVLKTTAPKPSRTPAPP 60

Query: 61  RSVVMSAPQTPDSARRGAETDAMGLLLRERIVFLGTSIDDFVADAIMSQLLLLDAQDSTK 120
            SV+M+APQTPD+ARRGAETDAMGLLLRERIVFLG SIDDFVADAI+SQLLLLDAQDSTK
Sbjct: 61  CSVLMTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120

Query: 121 DIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180
           DIRLFINS GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 121 DIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180

Query: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPM 240
           RIMVHQPLGGASGQAIDVEIQAREIMHNKNN+TRIISEFTGHPFEKVQKDIDRDRYMSP+
Sbjct: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 240

Query: 241 EAVEYGLIDGVIDKDSIIPLAPVPERVKASLNYEEIIKDPRKFLTPDIPDDEIY 291
           EAVEYGLIDGVIDKDSIIPL PVPERVKASLNYEEI KDP KFL PD+PDDEIY
Sbjct: 241 EAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPTKFLNPDVPDDEIY 294

[Close]

BLAST of Sed0026890 vs. NCBI nr
Match: XP_008448589.1 (PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucumis melo])

HSP 1 Score: 498.0 bits (1281), Expect = 5.3e-137
Identity = 262/294 (89.12%), Postives = 278/294 (94.56%), Query Frame = 0


Query: 1   MELLSRCSSLLPHASPLGLPNSHGKPSNFYPKLKSSLSFPSSSS----PVLKSARTLAPP 60
           MELLSRCS+L+P AS LGLPNSHGKPSNF+PKLKS+LSFPS+SS      LK +RTL PP
Sbjct: 1   MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP 60

Query: 61  RSVVMSAPQTPDSARRGAETDAMGLLLRERIVFLGTSIDDFVADAIMSQLLLLDAQDSTK 120
            S VM+APQTPD++RRGAETDAMGLLLRERIVFLG SIDDFVADAI+SQLLLLDAQDSTK
Sbjct: 61  CS-VMTAPQTPDASRRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120

Query: 121 DIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180
           DIRLFINS GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 121 DIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180

Query: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPM 240
           RIMVHQPLGGASGQAIDVEIQAREIMHNKNN+TRIISEFTGHPFEKVQKDIDRDRYMSP+
Sbjct: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 240

Query: 241 EAVEYGLIDGVIDKDSIIPLAPVPERVKASLNYEEIIKDPRKFLTPDIPDDEIY 291
           EAVEYGLIDGVID+DSIIPL PVPERVKA+LNYEE+ KDPRKFLTPD+PDDEIY
Sbjct: 241 EAVEYGLIDGVIDRDSIIPLVPVPERVKATLNYEEMSKDPRKFLTPDVPDDEIY 293

[Close]

BLAST of Sed0026890 vs. NCBI nr
Match: KAG7015794.1 (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 496.9 bits (1278), Expect = 1.2e-136
Identity = 263/294 (89.46%), Postives = 276/294 (93.88%), Query Frame = 0


Query: 1   MELLSRCSSLLPHASPLGLPNSHGKPSNFYPKLKSSLSFPSSSS----PVLKSARTLAPP 60
           MELLSRCS+L+PHAS LGL NSHGKPSNFYPKLKSSLSFPS+SS       K +RTLAP 
Sbjct: 1   MELLSRCSTLIPHASSLGLLNSHGKPSNFYPKLKSSLSFPSASSVLKTTARKPSRTLAPS 60

Query: 61  RSVVMSAPQTPDSARRGAETDAMGLLLRERIVFLGTSIDDFVADAIMSQLLLLDAQDSTK 120
            SV M+ PQTPD+A+RGAETDAMGLLLRERIVFLG SIDDFVADAI+SQLLLLDAQDSTK
Sbjct: 61  CSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120

Query: 121 DIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180
           DIRLFINS+GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 121 DIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180

Query: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPM 240
           RIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSP+
Sbjct: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPI 240

Query: 241 EAVEYGLIDGVIDKDSIIPLAPVPERVKASLNYEEIIKDPRKFLTPDIPDDEIY 291
           EAVEYGLIDGVIDKDSIIPL PVPERVKASLNY EI KDP+KFL+PD+PDDEIY
Sbjct: 241 EAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFLSPDVPDDEIY 294

[Close]

BLAST of Sed0026890 vs. NCBI nr
Match: XP_022923515.1 (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 493.8 bits (1270), Expect = 1.0e-135
Identity = 262/294 (89.12%), Postives = 275/294 (93.54%), Query Frame = 0


Query: 1   MELLSRCSSLLPHASPLGLPNSHGKPSNFYPKLKSSLSFPSSSS----PVLKSARTLAPP 60
           MELLSRCS+L+PHAS LGL NSHGKPSNFYPKLKSSLSFPS+SS       K +RTLA  
Sbjct: 48  MELLSRCSTLIPHASSLGLLNSHGKPSNFYPKLKSSLSFPSASSVLKTTARKPSRTLATS 107

Query: 61  RSVVMSAPQTPDSARRGAETDAMGLLLRERIVFLGTSIDDFVADAIMSQLLLLDAQDSTK 120
            SV M+ PQTPD+A+RGAETDAMGLLLRERIVFLG SIDDFVADAI+SQLLLLDAQDSTK
Sbjct: 108 CSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 167

Query: 121 DIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180
           DIRLFINS+GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 168 DIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 227

Query: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPM 240
           RIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSP+
Sbjct: 228 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPI 287

Query: 241 EAVEYGLIDGVIDKDSIIPLAPVPERVKASLNYEEIIKDPRKFLTPDIPDDEIY 291
           EAVEYGLIDGVIDKDSIIPL PVPERVKASLNY EI KDP+KFL+PD+PDDEIY
Sbjct: 288 EAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFLSPDVPDDEIY 341

[Close]

BLAST of Sed0026890 vs. ExPASy Swiss-Prot
Match: Q94B60 (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPP4 PE=1 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 1.7e-101
Identity = 205/282 (72.70%), Postives = 225/282 (79.79%), Query Frame = 0


Query: 25  KPSNFYPKLKSSLSFPSSSSP-----VLKSARTLAPPRSVVMSAP-----------QTPD 84
           KPS    +L SS S  SSS P      LK  + ++PP      +P           QT +
Sbjct: 11  KPSLVSSRLNSSSSASSSSFPKPNNLYLKPTKLISPPLRTTSPSPLRFANASIEMSQTQE 70

Query: 85  SARRGAETDAMGLLLRERIVFLGTSIDDFVADAIMSQLLLLDAQDSTKDIRLFINSTGGS 144
           SA RGAE+D MGLLLRERIVFLG+SIDDFVADAIMSQLLLLDA+D  KDI+LFINS GGS
Sbjct: 71  SAIRGAESDVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINSPGGS 130

Query: 145 LSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGAS 204
           LSATMAIYDVVQLVRADVSTIALGIAASTASIILG GTKGKR AMPN RIM+HQPLGGAS
Sbjct: 131 LSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPNTRIMIHQPLGGAS 190

Query: 205 GQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPMEAVEYGLIDGVI 264
           GQAIDVEIQA+E+MHNKNN+T II+  T   FE+V KDIDRDRYMSP+EAVEYGLIDGVI
Sbjct: 191 GQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRDRYMSPIEAVEYGLIDGVI 250

Query: 265 DKDSIIPLAPVPERVKASLNYEEIIKDPRKFLTPDIPDDEIY 291
           D DSIIPL PVP+RVK  +NYEEI KDP KFLTP+IPDDEIY
Sbjct: 251 DGDSIIPLEPVPDRVKPRVNYEEISKDPMKFLTPEIPDDEIY 292

[Close]

BLAST of Sed0026890 vs. ExPASy Swiss-Prot
Match: Q3ANI8 (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain CC9605) OX=110662 GN=clpP1 PE=3 SV=2)

HSP 1 Score: 213.4 bits (542), Expect = 3.4e-54
Identity = 107/195 (54.87%), Postives = 144/195 (73.85%), Query Frame = 0


Query: 56  PRSVVMSAPQTPDSARRGAET-DAMGLLLRERIVFLGTSIDDFVADAIMSQLLLLDAQDS 115
           P S     P   + + RG    D    LLRERI+FLGT +DD VADA+++Q+L L+A+D 
Sbjct: 2   PVSAPGPLPTVVEQSGRGDRAFDIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDP 61

Query: 116 TKDIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMP 175
            KDI+++INS GGS++A +AIYD +Q V  DV TI  G+AAS  + +L GGTKGKRLA+P
Sbjct: 62  EKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALP 121

Query: 176 NARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMS 235
           NARIM+HQPLGGA GQA+D+EIQA+EI++ K  +  +++E TG P +K+ +D DRD ++S
Sbjct: 122 NARIMIHQPLGGAQGQAVDIEIQAKEILYLKETLNGLMAEHTGQPLDKISEDTDRDYFLS 181

Query: 236 PMEAVEYGLIDGVID 250
           P EAVEYGLID V+D
Sbjct: 182 PAEAVEYGLIDRVVD 196

[Close]

BLAST of Sed0026890 vs. ExPASy Swiss-Prot
Match: Q3B0U1 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain CC9902) OX=316279 GN=clpP2 PE=3 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 7.7e-54
Identity = 106/195 (54.36%), Postives = 143/195 (73.33%), Query Frame = 0


Query: 56  PRSVVMSAPQTPDSARRGAET-DAMGLLLRERIVFLGTSIDDFVADAIMSQLLLLDAQDS 115
           P S     P   + + RG    D    LLRERI+FLGT +DD VADA+++Q+L L+A+D 
Sbjct: 2   PISAPGPLPTVVEQSGRGDRAFDIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDP 61

Query: 116 TKDIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMP 175
            KDI++++NS GGS++A +AIYD +Q V  DV TI  G+AAS  + +L GGTKGKRLA+P
Sbjct: 62  EKDIQIYVNSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALP 121

Query: 176 NARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMS 235
           NARIM+HQPLGGA GQA+D+EIQA+EI+  K  +  +++E TG P +K+ +D DRD ++S
Sbjct: 122 NARIMIHQPLGGAQGQAVDIEIQAKEILFLKETLNGLLAEHTGQPLDKISEDTDRDYFLS 181

Query: 236 PMEAVEYGLIDGVID 250
           P EAVEYGLID V+D
Sbjct: 182 PAEAVEYGLIDRVVD 196

[Close]

BLAST of Sed0026890 vs. ExPASy Swiss-Prot
Match: Q7V992 (ATP-dependent Clp protease proteolytic subunit 1 OS=Prochlorococcus marinus (strain MIT 9313) OX=74547 GN=clpP1 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 3.8e-53
Identity = 104/187 (55.61%), Postives = 140/187 (74.87%), Query Frame = 0


Query: 64  PQTPDSARRGAET-DAMGLLLRERIVFLGTSIDDFVADAIMSQLLLLDAQDSTKDIRLFI 123
           P   + + RG    D    LLRERI+FLGT +DD VADA+++Q+L L+A+D  KDI+++I
Sbjct: 27  PTVVEQSGRGERAFDIYSRLLRERIIFLGTGVDDQVADALVAQMLFLEAEDPEKDIQIYI 86

Query: 124 NSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQ 183
           NS GGS++A +AIYD +Q V  DV TI  G+AAS  + +L GGTKGKRLA+PNARIM+HQ
Sbjct: 87  NSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLCGGTKGKRLALPNARIMIHQ 146

Query: 184 PLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPMEAVEYG 243
           PLGGA GQA+D+EIQA+EI+  K  +  +++E TG P  K+ +D DRD ++SP +AVEYG
Sbjct: 147 PLGGAQGQAVDIEIQAKEILFLKETLNGLLAEHTGQPLNKIAEDTDRDHFLSPAKAVEYG 206

Query: 244 LIDGVID 250
           LID V+D
Sbjct: 207 LIDRVVD 213

[Close]

BLAST of Sed0026890 vs. ExPASy Swiss-Prot
Match: O34125 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=clpP2 PE=3 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 5.0e-53
Identity = 104/191 (54.45%), Postives = 144/191 (75.39%), Query Frame = 0


Query: 64  PQTPDSARRGAET-DAMGLLLRERIVFLGTSIDDFVADAIMSQLLLLDAQDSTKDIRLFI 123
           P   + + RG    D    LLRERIVFLGT +DD VAD+I++QLL L+A+D  KDI+L+I
Sbjct: 39  PTVVEQSGRGERAFDIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYI 98

Query: 124 NSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQ 183
           NS GGS++A MAIYD +Q V  DV+TI  G+AAS  + +L GG +GKR+A+P+ARIM+HQ
Sbjct: 99  NSPGGSVTAGMAIYDTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSARIMIHQ 158

Query: 184 PLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPMEAVEYG 243
           PLGGA GQA+D+EIQAREI+++K+ +  ++++ TG P EK++ D DRD +MSP EA  YG
Sbjct: 159 PLGGAQGQAVDIEIQAREILYHKSTLNDLLAQHTGQPLEKIEVDTDRDFFMSPEEAKAYG 218

Query: 244 LIDGVIDKDSI 254
           LID V+ + ++
Sbjct: 219 LIDQVLTRPTM 229

[Close]

BLAST of Sed0026890 vs. ExPASy TrEMBL
Match: A0A6J1CWB9 (ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN=LOC111014827 PE=3 SV=1)

HSP 1 Score: 500.7 bits (1288), Expect = 4.0e-138
Identity = 264/294 (89.80%), Postives = 275/294 (93.54%), Query Frame = 0


Query: 1   MELLSRCSSLLPHASPLGLPNSHGKPSNFYPKLKSSLSFPSSSS----PVLKSARTLAPP 60
           MELLSRCS+L+PHAS L LPNSH KPSNFYPKLKSSLSFPS+ S      LK +RTLA P
Sbjct: 1   MELLSRCSTLIPHASSLSLPNSHPKPSNFYPKLKSSLSFPSACSVLKATALKPSRTLASP 60

Query: 61  RSVVMSAPQTPDSARRGAETDAMGLLLRERIVFLGTSIDDFVADAIMSQLLLLDAQDSTK 120
            SV+M+APQTPD ARRGAETDAMGLLLRERIVFLG SIDDFVADAI+SQLLLLDAQDSTK
Sbjct: 61  CSVLMTAPQTPDVARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120

Query: 121 DIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180
           DIRLFINS GGSLSATMAIYDVVQLVRADVSTI LGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 121 DIRLFINSPGGSLSATMAIYDVVQLVRADVSTIGLGIAASTASIILGGGTKGKRLAMPNA 180

Query: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPM 240
           RIMVHQPLGGASGQAIDVEIQAREIMHNKNN+TRIISEFTGHPF+KVQKDIDRDRYMSP+
Sbjct: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPI 240

Query: 241 EAVEYGLIDGVIDKDSIIPLAPVPERVKASLNYEEIIKDPRKFLTPDIPDDEIY 291
           EAVEYGLIDGVIDKDSIIPL PVPERVKASLNYEEI KDPRKFLTPD+PDDEIY
Sbjct: 241 EAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 294

[Close]

BLAST of Sed0026890 vs. ExPASy TrEMBL
Match: A0A1S3BJF4 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103490719 PE=3 SV=1)

HSP 1 Score: 498.0 bits (1281), Expect = 2.6e-137
Identity = 262/294 (89.12%), Postives = 278/294 (94.56%), Query Frame = 0


Query: 1   MELLSRCSSLLPHASPLGLPNSHGKPSNFYPKLKSSLSFPSSSS----PVLKSARTLAPP 60
           MELLSRCS+L+P AS LGLPNSHGKPSNF+PKLKS+LSFPS+SS      LK +RTL PP
Sbjct: 1   MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP 60

Query: 61  RSVVMSAPQTPDSARRGAETDAMGLLLRERIVFLGTSIDDFVADAIMSQLLLLDAQDSTK 120
            S VM+APQTPD++RRGAETDAMGLLLRERIVFLG SIDDFVADAI+SQLLLLDAQDSTK
Sbjct: 61  CS-VMTAPQTPDASRRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120

Query: 121 DIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180
           DIRLFINS GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 121 DIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180

Query: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPM 240
           RIMVHQPLGGASGQAIDVEIQAREIMHNKNN+TRIISEFTGHPFEKVQKDIDRDRYMSP+
Sbjct: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 240

Query: 241 EAVEYGLIDGVIDKDSIIPLAPVPERVKASLNYEEIIKDPRKFLTPDIPDDEIY 291
           EAVEYGLIDGVID+DSIIPL PVPERVKA+LNYEE+ KDPRKFLTPD+PDDEIY
Sbjct: 241 EAVEYGLIDGVIDRDSIIPLVPVPERVKATLNYEEMSKDPRKFLTPDVPDDEIY 293

[Close]

BLAST of Sed0026890 vs. ExPASy TrEMBL
Match: A0A6J1EC18 (ATP-dependent Clp protease proteolytic subunit OS=Cucurbita moschata OX=3662 GN=LOC111431188 PE=3 SV=1)

HSP 1 Score: 493.8 bits (1270), Expect = 4.9e-136
Identity = 262/294 (89.12%), Postives = 275/294 (93.54%), Query Frame = 0


Query: 1   MELLSRCSSLLPHASPLGLPNSHGKPSNFYPKLKSSLSFPSSSS----PVLKSARTLAPP 60
           MELLSRCS+L+PHAS LGL NSHGKPSNFYPKLKSSLSFPS+SS       K +RTLA  
Sbjct: 48  MELLSRCSTLIPHASSLGLLNSHGKPSNFYPKLKSSLSFPSASSVLKTTARKPSRTLATS 107

Query: 61  RSVVMSAPQTPDSARRGAETDAMGLLLRERIVFLGTSIDDFVADAIMSQLLLLDAQDSTK 120
            SV M+ PQTPD+A+RGAETDAMGLLLRERIVFLG SIDDFVADAI+SQLLLLDAQDSTK
Sbjct: 108 CSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 167

Query: 121 DIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180
           DIRLFINS+GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 168 DIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 227

Query: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPM 240
           RIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSP+
Sbjct: 228 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPI 287

Query: 241 EAVEYGLIDGVIDKDSIIPLAPVPERVKASLNYEEIIKDPRKFLTPDIPDDEIY 291
           EAVEYGLIDGVIDKDSIIPL PVPERVKASLNY EI KDP+KFL+PD+PDDEIY
Sbjct: 288 EAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFLSPDVPDDEIY 341

[Close]

BLAST of Sed0026890 vs. ExPASy TrEMBL
Match: A0A6J1HNH6 (ATP-dependent Clp protease proteolytic subunit OS=Cucurbita maxima OX=3661 GN=LOC111465249 PE=3 SV=1)

HSP 1 Score: 491.1 bits (1263), Expect = 3.2e-135
Identity = 259/294 (88.10%), Postives = 273/294 (92.86%), Query Frame = 0


Query: 1   MELLSRCSSLLPHASPLGLPNSHGKPSNFYPKLKSSLSFPSSSS----PVLKSARTLAPP 60
           MELLSRCS+L+PHAS LGL NSHGKPSNFYPKLKS LSFPS+SS       K +RTLA  
Sbjct: 1   MELLSRCSTLIPHASSLGLLNSHGKPSNFYPKLKSGLSFPSASSVLKTTARKPSRTLATS 60

Query: 61  RSVVMSAPQTPDSARRGAETDAMGLLLRERIVFLGTSIDDFVADAIMSQLLLLDAQDSTK 120
            SV M+ PQTPD+A+RGAETDAMGLLLRERIVFLG SIDDFVADAI+SQLLLLDAQDSTK
Sbjct: 61  SSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120

Query: 121 DIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180
           DIRLFINS+GGSLSATMAIYDV+QLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 121 DIRLFINSSGGSLSATMAIYDVIQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180

Query: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPM 240
           RIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSP+
Sbjct: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPI 240

Query: 241 EAVEYGLIDGVIDKDSIIPLAPVPERVKASLNYEEIIKDPRKFLTPDIPDDEIY 291
           EAVEYGLIDGVIDKDSIIPL PVPERVKASLNY EI KDP+KF +PD+PDDEIY
Sbjct: 241 EAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFFSPDVPDDEIY 294

[Close]

BLAST of Sed0026890 vs. ExPASy TrEMBL
Match: A0A6J1FAG6 (ATP-dependent Clp protease proteolytic subunit OS=Cucurbita moschata OX=3662 GN=LOC111443555 PE=3 SV=1)

HSP 1 Score: 482.6 bits (1241), Expect = 1.1e-132
Identity = 255/294 (86.73%), Postives = 270/294 (91.84%), Query Frame = 0


Query: 1   MELLSRCSSLLPHASPLGLPNSHGKPSNFYPKLKSSLSFPSSSS----PVLKSARTLAPP 60
           MELLSRCS+L+PHAS L LPNSHGK S FYPK KSSLSFPSSSS      LK +RTLAPP
Sbjct: 1   MELLSRCSTLVPHASTLSLPNSHGKSSVFYPKRKSSLSFPSSSSVLKATALKPSRTLAPP 60

Query: 61  RSVVMSAPQTPDSARRGAETDAMGLLLRERIVFLGTSIDDFVADAIMSQLLLLDAQDSTK 120
            SV+M+ PQTPDSAR GAETDAMGLLLRERIVFLG +IDDFVADAI+SQLLLLDAQDSTK
Sbjct: 61  CSVLMTTPQTPDSARTGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDSTK 120

Query: 121 DIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180
           DIRLFINS+GGSLSATMAI DV+QLVRADVSTIALGIAASTASIILGGGTKGKR AMPNA
Sbjct: 121 DIRLFINSSGGSLSATMAIIDVLQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNA 180

Query: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPM 240
           RIMVHQPLGG SGQAIDVEIQAREIMHNKNNI RIIS +TGHPFEKVQKDIDRDRYMSP+
Sbjct: 181 RIMVHQPLGGTSGQAIDVEIQAREIMHNKNNIIRIISNYTGHPFEKVQKDIDRDRYMSPI 240

Query: 241 EAVEYGLIDGVIDKDSIIPLAPVPERVKASLNYEEIIKDPRKFLTPDIPDDEIY 291
           EAVEYGLIDGVIDKD+IIPL  +PERVKA+LNYEEI KDPRKFLTPD+PDDEIY
Sbjct: 241 EAVEYGLIDGVIDKDTIIPLMQLPERVKATLNYEEISKDPRKFLTPDVPDDEIY 294

[Close]

BLAST of Sed0026890 vs. TAIR 10
Match: AT5G45390.1 (CLP protease P4 )

HSP 1 Score: 370.5 bits (950), Expect = 1.2e-102
Identity = 205/282 (72.70%), Postives = 225/282 (79.79%), Query Frame = 0


Query: 25  KPSNFYPKLKSSLSFPSSSSP-----VLKSARTLAPPRSVVMSAP-----------QTPD 84
           KPS    +L SS S  SSS P      LK  + ++PP      +P           QT +
Sbjct: 11  KPSLVSSRLNSSSSASSSSFPKPNNLYLKPTKLISPPLRTTSPSPLRFANASIEMSQTQE 70

Query: 85  SARRGAETDAMGLLLRERIVFLGTSIDDFVADAIMSQLLLLDAQDSTKDIRLFINSTGGS 144
           SA RGAE+D MGLLLRERIVFLG+SIDDFVADAIMSQLLLLDA+D  KDI+LFINS GGS
Sbjct: 71  SAIRGAESDVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINSPGGS 130

Query: 145 LSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGAS 204
           LSATMAIYDVVQLVRADVSTIALGIAASTASIILG GTKGKR AMPN RIM+HQPLGGAS
Sbjct: 131 LSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPNTRIMIHQPLGGAS 190

Query: 205 GQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPMEAVEYGLIDGVI 264
           GQAIDVEIQA+E+MHNKNN+T II+  T   FE+V KDIDRDRYMSP+EAVEYGLIDGVI
Sbjct: 191 GQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRDRYMSPIEAVEYGLIDGVI 250

Query: 265 DKDSIIPLAPVPERVKASLNYEEIIKDPRKFLTPDIPDDEIY 291
           D DSIIPL PVP+RVK  +NYEEI KDP KFLTP+IPDDEIY
Sbjct: 251 DGDSIIPLEPVPDRVKPRVNYEEISKDPMKFLTPEIPDDEIY 292

[Close]

BLAST of Sed0026890 vs. TAIR 10
Match: AT1G66670.1 (CLP protease proteolytic subunit 3 )

HSP 1 Score: 197.6 bits (501), Expect = 1.4e-50
Identity = 114/256 (44.53%), Postives = 160/256 (62.50%), Query Frame = 0


Query: 14  ASPLGLPNSHGKPSNF------YPKLKSSLSFPSSSSPVLKSARTLAPPRSV----VMSA 73
           ++P+ L N  GK  NF       PK        SS S      +TL+    V    + S 
Sbjct: 13  SNPICLLNP-GKNLNFPIRNHRIPKTSKPFCVRSSMSLSKPPRQTLSSNWDVSSFSIDSV 72

Query: 74  PQTPDSARRGAETDAMGLLLRERIVFLGTSIDDFVADAIMSQLLLLDAQDSTKDIRLFIN 133
            Q+P       E D   +LLR+RIVFLG+ +DD  AD ++SQLLLLDA+DS +DI LFIN
Sbjct: 73  AQSPSRLPSFEELDTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFIN 132

Query: 134 STGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQP 193
           S GGS++A M IYD ++  +ADVST+ LG+AAS  + +L  G+KGKR  MPN+++M+HQP
Sbjct: 133 SPGGSITAGMGIYDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQP 192

Query: 194 LGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPMEAVEYGL 253
           LG A G+A ++ I+ RE+M++K  + +I S  TG P  +++ D DRD +++P EA EYGL
Sbjct: 193 LGTAGGKATEMSIRIREMMYHKIKLNKIFSRITGKPESEIESDTDRDNFLNPWEAKEYGL 252

Query: 254 IDGVIDKDSIIPLAPV 260
           ID VID      +AP+
Sbjct: 253 IDAVIDDGKPGLIAPI 267

[Close]

BLAST of Sed0026890 vs. TAIR 10
Match: AT1G02560.1 (nuclear encoded CLP protease 5 )

HSP 1 Score: 178.7 bits (452), Expect = 6.7e-45
Identity = 87/167 (52.10%), Postives = 124/167 (74.25%), Query Frame = 0


Query: 82  LLRERIVFLGTSIDDFVADAIMSQLLLLDAQDSTKDIRLFINSTGGSLSATMAIYDVVQL 141
           L + RI+  G ++DD +A+ I++QLL LDA D TKDI +++NS GGS++A MAI+D ++ 
Sbjct: 119 LFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMRH 178

Query: 142 VRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREI 201
           +R DVST+ +G+AAS  + +L  GTKGKR ++PN+RIM+HQPLGGA G   D++IQA E+
Sbjct: 179 IRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEM 238

Query: 202 MHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPMEAVEYGLIDGVI 249
           +H+K N+   ++  TG   EK+ +D DRD +MS  EA EYGLIDGVI
Sbjct: 239 LHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVI 285

[Close]

BLAST of Sed0026890 vs. TAIR 10
Match: AT1G11750.1 (CLP protease proteolytic subunit 6 )

HSP 1 Score: 157.5 bits (397), Expect = 1.6e-38
Identity = 90/230 (39.13%), Postives = 132/230 (57.39%), Query Frame = 0


Query: 27  SNFYPKLKSSLSFPSSSSPVLKSARTLAPPRSVVMSA-----PQTPDSARRGAETDAMGL 86
           S +   LK+ LS   S SP+    +    PR  V+ A     P  P     G   D   +
Sbjct: 44  SPYGDSLKAGLSSNVSGSPIKIDNKA---PRFGVIEAKKGNPPVMPSVMTPGGPLDLSSV 103

Query: 87  LLRERIVFLGTSIDDFVADAIMSQLLLLDAQDSTKDIRLFINSTGGSLSATMAIYDVVQL 146
           L R RI+F+G  I+  VA  ++SQL+ L + D   DI +++N  GGS  + +AIYD +  
Sbjct: 104 LFRNRIIFIGQPINAQVAQRVISQLVTLASIDDKSDILMYLNCPGGSTYSVLAIYDCMSW 163

Query: 147 VRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREI 206
           ++  V T+A G+AAS  +++L GG KG R AMPN R+M+HQP  G  G   DV  Q  E 
Sbjct: 164 IKPKVGTVAFGVAASQGALLLAGGEKGMRYAMPNTRVMIHQPQTGCGGHVEDVRRQVNEA 223

Query: 207 MHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPMEAVEYGLIDGVIDKD 252
           +  +  I R+ + FTG P EKVQ+  +RDR++S  EA+E+GLIDG+++ +
Sbjct: 224 IEARQKIDRMYAAFTGQPLEKVQQYTERDRFLSASEALEFGLIDGLLETE 270

[Close]

BLAST of Sed0026890 vs. TAIR 10
Match: AT1G11750.2 (CLP protease proteolytic subunit 6 )

HSP 1 Score: 154.5 bits (389), Expect = 1.3e-37
Identity = 89/234 (38.03%), Postives = 131/234 (55.98%), Query Frame = 0


Query: 21  NSHGKPSNFYPKLKSSLSFPSSSSPVLKSART---LAPPRSVVMSAPQTPDSARRGAETD 80
           N  G P     K  SSL  P  +  +LKS+          +   + P  P     G   D
Sbjct: 57  NVSGSPIKIDNKAPSSLPLPILN--ILKSSTVYFIFGVIEAKKGNPPVMPSVMTPGGPLD 116

Query: 81  AMGLLLRERIVFLGTSIDDFVADAIMSQLLLLDAQDSTKDIRLFINSTGGSLSATMAIYD 140
              +L R RI+F+G  I+  VA  ++SQL+ L + D   DI +++N  GGS  + +AIYD
Sbjct: 117 LSSVLFRNRIIFIGQPINAQVAQRVISQLVTLASIDDKSDILMYLNCPGGSTYSVLAIYD 176

Query: 141 VVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQ 200
            +  ++  V T+A G+AAS  +++L GG KG R AMPN R+M+HQP  G  G   DV  Q
Sbjct: 177 CMSWIKPKVGTVAFGVAASQGALLLAGGEKGMRYAMPNTRVMIHQPQTGCGGHVEDVRRQ 236

Query: 201 AREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPMEAVEYGLIDGVIDKD 252
             E +  +  I R+ + FTG P EKVQ+  +RDR++S  EA+E+GLIDG+++ +
Sbjct: 237 VNEAIEARQKIDRMYAAFTGQPLEKVQQYTERDRFLSASEALEFGLIDGLLETE 288

The following BLAST results are available for this feature:

BLAST of Sed0026890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145352.1	8.2e-138	89.80	ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Momordica chara...	[more]
XP_038876611.1	1.8e-137	89.46	ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Benincasa hispi...	[more]
XP_008448589.1	5.3e-137	89.12	PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucu...	[more]
KAG7015794.1	1.2e-136	89.46	ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucurbita argyr...	[more]
XP_022923515.1	1.0e-135	89.12	ATP-dependent Clp protease proteolytic subunit 4, chloroplastic-like [Cucurbita ...	[more]

BLAST of Sed0026890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94B60	1.7e-101	72.70	ATP-dependent Clp protease proteolytic subunit 4, chloroplastic OS=Arabidopsis t...	[more]
Q3ANI8	3.4e-54	54.87	ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain CC...	[more]
Q3B0U1	7.7e-54	54.36	ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain CC...	[more]
Q7V992	3.8e-53	55.61	ATP-dependent Clp protease proteolytic subunit 1 OS=Prochlorococcus marinus (str...	[more]
O34125	5.0e-53	54.45	ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus elongatus (str...	[more]

BLAST of Sed0026890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CWB9	4.0e-138	89.80	ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN...	[more]
A0A1S3BJF4	2.6e-137	89.12	ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1EC18	4.9e-136	89.12	ATP-dependent Clp protease proteolytic subunit OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1HNH6	3.2e-135	88.10	ATP-dependent Clp protease proteolytic subunit OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1FAG6	1.1e-132	86.73	ATP-dependent Clp protease proteolytic subunit OS=Cucurbita moschata OX=3662 GN=...	[more]

BLAST of Sed0026890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G45390.1	1.2e-102	72.70	CLP protease P4	[more]
AT1G66670.1	1.4e-50	44.53	CLP protease proteolytic subunit 3	[more]
AT1G02560.1	6.7e-45	52.10	nuclear encoded CLP protease 5	[more]
AT1G11750.1	1.6e-38	39.13	CLP protease proteolytic subunit 6	[more]
AT1G11750.2	1.3e-37	38.03	CLP protease proteolytic subunit 6	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 286..290
None	No IPR available	GENE3D	3.90.226.10		coord: 56..253 e-value: 1.4E-69 score: 235.8
None	No IPR available	PANTHER	PTHR10381:SF24	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 4, CHLOROPLASTIC	coord: 59..287
IPR001907	ATP-dependent Clp protease proteolytic subunit	PRINTS	PR00127	CLPPROTEASEP	coord: 77..92 score: 47.34 coord: 117..137 score: 55.0 coord: 226..245 score: 56.75 coord: 148..165 score: 50.56 coord: 169..188 score: 57.75
IPR001907	ATP-dependent Clp protease proteolytic subunit	HAMAP	MF_00444	ClpP	coord: 62..251 score: 36.845181
IPR001907	ATP-dependent Clp protease proteolytic subunit	CDD	cd07017	S14_ClpP_2	coord: 77..247 e-value: 7.55141E-97 score: 280.482
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PFAM	PF00574	CLP_protease	coord: 76..250 e-value: 6.8E-72 score: 241.2
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PANTHER	PTHR10381	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT	coord: 59..287
IPR033135	ClpP, histidine active site	PROSITE	PS00382	CLP_PROTEASE_HIS	coord: 170..183
IPR029045	ClpP/crotonase-like domain superfamily	SUPERFAMILY	52096	ClpP/crotonase	coord: 76..253

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0026890.1	Sed0026890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006515	protein quality control for misfolded or incompletely synthesized proteins
biological_process	GO:0006508	proteolysis
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009368	endopeptidase Clp complex
cellular_component	GO:0009526	plastid envelope
molecular_function	GO:0051117	ATPase binding
molecular_function	GO:0004176	ATP-dependent peptidase activity
molecular_function	GO:0004252	serine-type endopeptidase activity