Sed0026870 (gene) Chayote v1

Overview


Name	Sed0026870
Type	gene
Organism	Sechium edule (Chayote v1)
Description	LysM domain-containing protein
Location	LG08: 39419744 .. 39424522 (+)
RNA-Seq Expression	Sed0026870
Synteny	Sed0026870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAAATAAAACTTGCTAAGTTTTTCGATTTTAGTCGGTTCCTATTTAGACTTGTATAAAGCTCCATTCTTCTATCGTTCTTTAATGAAGTAAACAAACTATTTTTTTTAAGGATTAATCTTTTTAATAGGTAAAATTAAATTATTTCACGCAGATAAGGCCAAAGTAGAGGGTGTTTTTTTTTACTATTCCATTTTCCAATAAGATAGGAGAGAATTTATTATTATTTGAAAAAAAAAAAGTTAGCAACAATGGTGGGAGTTCCCCTCACCGACAACTTTAATTTCGACATATCGACAGATTGTCGTCTAGTGTGGCGATTCATCATATTACATAAAATTTTCAACCCCTTCACTTTATTTGATGAATTTAAAAAATACATTTAAAACGTGAATTATTGATTTTTTATTTTTTGGTTAATTCAAAGGAAAATAGTTATATTAACTTATTATTATTATTTTTAATTCGACCTTATTGAGATTTGAACTCTAATCTCTTAATTATAGTTTATCCCACTAAGACGGCTCCTTTCAACAAGATAATTAACTTAAGTTAACAATAATTAACATACCATATAGAATTTCCGTTGAAATTATATAAAAAAAAATGTAGTGAACTTAATATTGAAATAAATATAACGTTAAAGAGAATCAAAGTTGTAAAGATTGCTTCATTTGATCGACCGAGCTCGTGATTTTAAGAATGAAGAACAGTATTGGGTAATGGGTACTTCAAATTTACAGCTTCGAATTGAGAATCCAATCATTCTCTCCCACTTTCGTTTGCTTTTATTTGATCCTAAAATATTCTTCATCGAGTGGTTGGTGAAGGTTTGTTTCGATCCTAAGATCAGATCCTTCCTCTTTTCCTCGTCGCAATTTCAACTCAAGAACGAGTGATTCGAAGAAGAAGAAGTTCGAGTAAATGTCTCCGTTGAACAGTTCTTCAAGTGGAGGTAGTGGAAATGGAGGATCGAATTACATTGAGCATCAAATTTCCAGAATGGATACTCTCGCCGGTATTGCGATTAAGTATGGAGTTGAGGTAATCTTTCATTTTCCTTTTCTTTCATCGATTTTTTGTTCTTTCTTCTGTCGGTGTGATTCTTTGATTGTAATCGTTGATTTAGTTCGATTTTGTGAGGTCTGGAAATCTGTGTTTGAACTTTGAGTTCGTTGTTATCGCCGAATAGGAATGGAATTGAATCGCGTCTTGATCTTCCAAAAGTGTTTTTAAATTCCGAGTTGAAGGTGATTTCAGCACGTCTTGTTGTAGAAATATTGATCAATTGCGATATTTGCGTATATATATTGTGAAATTAATGGTTCAATTGCGAGGATTTAATTGAATCACTGCTGTTTAACTTCTTTAGGAAACACATAAGGCTAATATTAGGGCGAATTGTTTTGTGTTTTTTGTATTTCCAATCCGTGAGCTGTGTTTCTCTGCTAGGCGTAATTCAACAATGATCTGTTTCCCTAAATAGATATCTTCAGCTCTGAACTTCATCGGTTTGGAGCCGACTTTTGGTTCGGTTGCGTTTGGCTAAGGTGCAAAGATGATCAAGTTGAACAGTAGAAAGTTCGTATTAGATTGTATTGTTTTCTGAGAATCTTGTTAACTAAAATGCCAGATTGTTAGGATGAATAGAACACTTTTTTTTTCTTTTTTCCATTCTATCTTGCTTGCTGAATTAAGAAGAGTAGAGCTCTAATGACATTTTGTACAACCTTGTAACCTCGTAGCCATGAGGTTACAGGTTCGAATCCTCCTTCCCCCAATATTGTCATATAAAAAAAAAACAAATCTTGCTTGCTGAATTCCCTCATATTCTTTTAAATTGGTAATGTGACTTTACTCTTCATTTTATAAAATTCTAGTTTGGTAATTAGTAAGGTCATACTGAACAATTAACATCCACAGGGTTGATCTTAGACAACCATTATGGGTTGGTCTATAGTCAAGAGGGCTTTGGAAAACCAAAAAGTCTTGGATTCAATCCAAGATGACCACTTACCTAGGAATTAATTTCCTACTAGATTCCTTAACAACCAAATGTTGCAGGGTCAAGGGATTTGTCCAGTGAAAACAGTCGAGATTCTCGCAAGTTGGCCTGAACAATCACGATTAACATCCTACAGGTCTTGGGGAGCTTAGAGGTGATGAGTTTAGTCCATGGTGACCCTTACCTAGGAATTAATTTCTTATGGATTTTCTTTATATCAAAATGTTGTAGGGTCAGACGGCATGTCCTGTGACATTAGTGAAGCCGAGTGTAAGTTGGCCCGAACAGTCACGTTTATAAAAAAAAAATAGCCGAGGTGCACCTAAGCTGGTTGATCTTAAGACTCATCATTCGATTCATTCTATTTGTTGTGATTTAATAGTGCTTTTCCCATCCTAATGCTCTTGACTTCATTACTCACTGATGCCCTAAAATAAATAGGTGGCTGACATCAAGAGGTTGAATGGGTTGGCAGCAGACCTTCAATTGTTTGCTTTGAAGAAAGTGAGAATTCCTCTACCAGGAAGACACCCTCCATCACCCAGCCTGTCTGATGCCTCTTCTGTTACAGGGTATTCCTTGCTGTAAATTTCTACAAGAATTTATATCTTTATGTGATTAAGCTATATCTGGTTACCTATATTTTTTTTGGCATACTTCACGTGCTAAAGTTTGACTTTGTAAAGTCAATTGTTGCGCCCGCGCTCTTAAAATTTAGTATATGCAAATTTTGAGGCTGGGGTGGGTAATGGGAATCTTGAAAATCTCGTTGTTTCATAGTTTTAAGAATCAAGGAACAACCCATGTGCTTAGTTTATTTCAAGTTATTGAGTTGTTTTATATGGTTATGGCACTGTCTGGGTCGCCCTAACAACTTAAGTTGTGGTGAATATCTTTATTATTTGAAATTTGAATGCTGTGAAGGCTAAGGTAGTTATAAATTATAACATTTGACACCAAATACCTTTCTAACTGAAATTTGCATCATAAACATCTGATATGATCCCTATTAAGGGTATACTAGTAATTAGAAAGGCAATTTGTTAGGGCATTTGACTATAAATAGAGGTAGTGGGTAAGTATAGACTGATAGAGGCAAACAATATTTTGGTATATGGTTTAAGGCTTAAGAGAGTGTTCTCCAAGTAGAAGTACCTTAAACTTGGGTTTATCCAATAATTTCAGTTATTTTCATATCAATACAATTTGGATTCTATCAACATCCTATGCAGCATGTTATCTTTGGAATTGGGATCATTGCCAATTTCTTGAAGATTTCAACTGACTTGCCTTGATTTTGTTTGAAAATTCTCTTGATGGATTGGTTCTATTTGGTCCGGAAGTAGTAACTTGGTTGATTATGTGTTTGTTGTATAAGAAACTTATAATCGTTCAACTTTGTATGGATATTGTAATTTTATCGATTCGATTCAGATTATTTTACTGAAGTTATATCATTCATCATGCATAATCTGAGCCCCAACCCCCCGGTCCTGTCCTTTTTTCTCACTCATATACTCTGCACTCTTGAGATCGTATATTCTACTGCCCAGGTTTATCTAATAATAGATTTTGCCAAATTTATTGCAGAAGTGGATCTGTAAATGAAGAAACTCTACATTTAGGCCAACCTACTAACATGCTAAACTCTTTGCAATCATTGAGATTAAAATCACCTAACAAGGAAGCCTCCCCTGCCATGAGCACGCTACAAAAATACTATGGTCTAAACTCACGAACAGTCGAAAGCGCATCTGAAGGTGTGGAGATGGCATTGTACAGAACTGAAAATTCAAATTGCATTGACGATGGGGTGTTTCCTAGAACCTCGGTGCTTTCTACACCACCTCCAAACATCCAGAAAAACTCGAAGATCAAGAAATATGCCGGTAGTTTTTGGACCGAGAACGACTCGATAACTGAACATCTATTACTTGCAGGATCTGGGGATGGAGAGAGTGAGAAATCCGATGAGAAGTTGGTTCGCCGGCGTCAAAAGGCAGAAAATGGGGCTGTCACCCCAGAGAGATTGCTGAAGGGAGAAAATAGTGGTGGAAGCTTTTTTTCTGTTTCAAATGGAAAGAGTTTAGCCATGAGGCTAAAGTCAGCTAGCAGATCAATGCTGTTATCAGATTCAGATCCAGTGGGGATAAATTCCATTCCAGTAGGATTAGGAGATGCTATCATTACTGATGGTATTTCTGAAGTTCATAAATCATTAAGTACATCAAATCTGAGAGACCAAGAAAGCAGCAATTCAGCATCTGTGTGGTCAACTACAAGGTGGAGTTTGAAGCCGGACTTGCAAGTTCTCTCGACCGCTGCAATCACGAAACCACTCTTTGATGGTTTGCCAAATCCAATCACAGGCCGGAGGAACAAAGCTGCCCTTGATTAACCATGTTCATAACTTCGTTCATATTCGCAACTGCTCGATTCTTTTGGCGTGGGCTGGAAATTCTTTTGCAAGTGTTATTACAGGAATGTATAGGTAGGGATGCGAAATAAGAGAAAGATCAATTGTCCAAGGAAGTTAACATAAGTAAATACTACACCAAGATATTTTTTGTCAAAGATTGAGCGTCTGGTATGAGGCAATGCCTACTATGGGGATCATATGTTGAGCCTGAAGCTACATTTTGATAAACATACTTCATCTGTATTTAAGATTATTTGTTGTCATTACCTTAGTATGAAAATATATCTAGAACTCATTATCTTGTAGACCTTAATCTGGATGAGTGATTTCCCTTTCATAATTCAGCTCACATGCAC

mRNA sequence

TGAAATAAAACTTGCTAAGTTTTTCGATTTTAGTCGGTTCCTATTTAGACTTGTATAAAGCTCCATTCTTCTATCGTTCTTTAATGAAGTAAACAAACTATTTTTTTTAAGGATTAATCTTTTTAATAGGTAAAATTAAATTATTTCACGCAGATAAGGCCAAAGTAGAGGGTGTTTTTTTTTACTATTCCATTTTCCAATAAGATAGGAGAGAATTTATTATTATTTGAAAAAAAAAAAGTTAGCAACAATGGTGGGAGTTCCCCTCACCGACAACTTTAATTTCGACATATCGACAGATTGTCGTCTAGTGTGGCGATTCATCATATTACATAAAATTTTCAACCCCTTCACTTTATTTGATGAATTTAAAAAATACATTTAAAACGTGAATTATTGATTTTTTATTTTTTGGTTAATTCAAAGGAAAATAGTTATATTAACTTATTATTATTATTTTTAATTCGACCTTATTGAGATTTGAACTCTAATCTCTTAATTATAGTTTATCCCACTAAGACGGCTCCTTTCAACAAGATAATTAACTTAAGTTAACAATAATTAACATACCATATAGAATTTCCGTTGAAATTATATAAAAAAAAATGTAGTGAACTTAATATTGAAATAAATATAACGTTAAAGAGAATCAAAGTTGTAAAGATTGCTTCATTTGATCGACCGAGCTCGTGATTTTAAGAATGAAGAACAGTATTGGGTAATGGGTACTTCAAATTTACAGCTTCGAATTGAGAATCCAATCATTCTCTCCCACTTTCGTTTGCTTTTATTTGATCCTAAAATATTCTTCATCGAGTGGTTGGTGAAGGTTTGTTTCGATCCTAAGATCAGATCCTTCCTCTTTTCCTCGTCGCAATTTCAACTCAAGAACGAGTGATTCGAAGAAGAAGAAGTTCGAGTAAATGTCTCCGTTGAACAGTTCTTCAAGTGGAGGTAGTGGAAATGGAGGATCGAATTACATTGAGCATCAAATTTCCAGAATGGATACTCTCGCCGGTATTGCGATTAAGTATGGAGTTGAGGTGGCTGACATCAAGAGGTTGAATGGGTTGGCAGCAGACCTTCAATTGTTTGCTTTGAAGAAAGTGAGAATTCCTCTACCAGGAAGACACCCTCCATCACCCAGCCTGTCTGATGCCTCTTCTGTTACAGGAAGTGGATCTGTAAATGAAGAAACTCTACATTTAGGCCAACCTACTAACATGCTAAACTCTTTGCAATCATTGAGATTAAAATCACCTAACAAGGAAGCCTCCCCTGCCATGAGCACGCTACAAAAATACTATGGTCTAAACTCACGAACAGTCGAAAGCGCATCTGAAGGTGTGGAGATGGCATTGTACAGAACTGAAAATTCAAATTGCATTGACGATGGGGTGTTTCCTAGAACCTCGGTGCTTTCTACACCACCTCCAAACATCCAGAAAAACTCGAAGATCAAGAAATATGCCGGTAGTTTTTGGACCGAGAACGACTCGATAACTGAACATCTATTACTTGCAGGATCTGGGGATGGAGAGAGTGAGAAATCCGATGAGAAGTTGGTTCGCCGGCGTCAAAAGGCAGAAAATGGGGCTGTCACCCCAGAGAGATTGCTGAAGGGAGAAAATAGTGGTGGAAGCTTTTTTTCTGTTTCAAATGGAAAGAGTTTAGCCATGAGGCTAAAGTCAGCTAGCAGATCAATGCTGTTATCAGATTCAGATCCAGTGGGGATAAATTCCATTCCAGTAGGATTAGGAGATGCTATCATTACTGATGGTATTTCTGAAGTTCATAAATCATTAAGTACATCAAATCTGAGAGACCAAGAAAGCAGCAATTCAGCATCTGTGTGGTCAACTACAAGGTGGAGTTTGAAGCCGGACTTGCAAGTTCTCTCGACCGCTGCAATCACGAAACCACTCTTTGATGGTTTGCCAAATCCAATCACAGGCCGGAGGAACAAAGCTGCCCTTGATTAACCATGTTCATAACTTCGTTCATATTCGCAACTGCTCGATTCTTTTGGCGTGGGCTGGAAATTCTTTTGCAAGTGTTATTACAGGAATGTATAGGTAGGGATGCGAAATAAGAGAAAGATCAATTGTCCAAGGAAGTTAACATAAGTAAATACTACACCAAGATATTTTTTGTCAAAGATTGAGCGTCTGGTATGAGGCAATGCCTACTATGGGGATCATATGTTGAGCCTGAAGCTACATTTTGATAAACATACTTCATCTGTATTTAAGATTATTTGTTGTCATTACCTTAGTATGAAAATATATCTAGAACTCATTATCTTGTAGACCTTAATCTGGATGAGTGATTTCCCTTTCATAATTCAGCTCACATGCAC

Coding sequence (CDS)

ATGTCTCCGTTGAACAGTTCTTCAAGTGGAGGTAGTGGAAATGGAGGATCGAATTACATTGAGCATCAAATTTCCAGAATGGATACTCTCGCCGGTATTGCGATTAAGTATGGAGTTGAGGTGGCTGACATCAAGAGGTTGAATGGGTTGGCAGCAGACCTTCAATTGTTTGCTTTGAAGAAAGTGAGAATTCCTCTACCAGGAAGACACCCTCCATCACCCAGCCTGTCTGATGCCTCTTCTGTTACAGGAAGTGGATCTGTAAATGAAGAAACTCTACATTTAGGCCAACCTACTAACATGCTAAACTCTTTGCAATCATTGAGATTAAAATCACCTAACAAGGAAGCCTCCCCTGCCATGAGCACGCTACAAAAATACTATGGTCTAAACTCACGAACAGTCGAAAGCGCATCTGAAGGTGTGGAGATGGCATTGTACAGAACTGAAAATTCAAATTGCATTGACGATGGGGTGTTTCCTAGAACCTCGGTGCTTTCTACACCACCTCCAAACATCCAGAAAAACTCGAAGATCAAGAAATATGCCGGTAGTTTTTGGACCGAGAACGACTCGATAACTGAACATCTATTACTTGCAGGATCTGGGGATGGAGAGAGTGAGAAATCCGATGAGAAGTTGGTTCGCCGGCGTCAAAAGGCAGAAAATGGGGCTGTCACCCCAGAGAGATTGCTGAAGGGAGAAAATAGTGGTGGAAGCTTTTTTTCTGTTTCAAATGGAAAGAGTTTAGCCATGAGGCTAAAGTCAGCTAGCAGATCAATGCTGTTATCAGATTCAGATCCAGTGGGGATAAATTCCATTCCAGTAGGATTAGGAGATGCTATCATTACTGATGGTATTTCTGAAGTTCATAAATCATTAAGTACATCAAATCTGAGAGACCAAGAAAGCAGCAATTCAGCATCTGTGTGGTCAACTACAAGGTGGAGTTTGAAGCCGGACTTGCAAGTTCTCTCGACCGCTGCAATCACGAAACCACTCTTTGATGGTTTGCCAAATCCAATCACAGGCCGGAGGAACAAAGCTGCCCTTGATTAA

Protein sequence

MSPLNSSSSGGSGNGGSNYIEHQISRMDTLAGIAIKYGVEVADIKRLNGLAADLQLFALKKVRIPLPGRHPPSPSLSDASSVTGSGSVNEETLHLGQPTNMLNSLQSLRLKSPNKEASPAMSTLQKYYGLNSRTVESASEGVEMALYRTENSNCIDDGVFPRTSVLSTPPPNIQKNSKIKKYAGSFWTENDSITEHLLLAGSGDGESEKSDEKLVRRRQKAENGAVTPERLLKGENSGGSFFSVSNGKSLAMRLKSASRSMLLSDSDPVGINSIPVGLGDAIITDGISEVHKSLSTSNLRDQESSNSASVWSTTRWSLKPDLQVLSTAAITKPLFDGLPNPITGRRNKAALD

Homology

[Close]

BLAST of Sed0026870 vs. NCBI nr
Match: KAG6572989.1 (LysM and putative peptidoglycan-binding domain-containing protein 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 572.0 bits (1473), Expect = 3.5e-159
Identity = 305/355 (85.92%), Postives = 325/355 (91.55%), Query Frame = 0


Query: 1   MSPLNSSSSGGSGNGGSNYIEHQISRMDTLAGIAIKYGVEVADIKRLNGLAADLQLFALK 60
           MSP NSSSSG SG+GG NYIEHQIS+MDTLAGIAIKYGVEVADI+RLNGLAADLQ+FALK
Sbjct: 1   MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60

Query: 61  KVRIPLPGRHPPSPSLSDASSVTGSGSVNEETLHLGQPTNMLNSLQSLRLKSPNKEASPA 120
           K+RIPLPGRHPPSPSLSDAS+VTGSGSVNEE LHLGQPT+MLNSLQS RLKSPN +ASPA
Sbjct: 61  KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSLQSSRLKSPNPKASPA 120

Query: 121 MSTLQKYYGLNSRTVESASEGVEMALYRTENSNCIDDGVFPRTSVLSTPPPNIQKNSKIK 180
           MSTLQKYYGL SRTVESA EG+EMALYRTENSN +DDG+FP+TS LSTPP NI  +SK +
Sbjct: 121 MSTLQKYYGLVSRTVESAPEGMEMALYRTENSNFVDDGLFPKTSELSTPPSNI--HSKTR 180

Query: 181 KYAGSFWTENDSITEHLLLAGSGDGESEKSDEKLVRRRQKAENGAVTPERLLKGENSGGS 240
           KYAGSFW ENDSITEHLL    GDGE+EKSDEKLVRRRQKAENG  TPER  KGENSGGS
Sbjct: 181 KYAGSFWPENDSITEHLLCTEPGDGENEKSDEKLVRRRQKAENGVGTPERSSKGENSGGS 240

Query: 241 FFSVSNGKSLAMRLKSASRSMLLSDSDPVGINSIPVGLGDAIITDGISEVHKSLSTSNLR 300
           FFS SNGKSLAMRLKS SRSMLLSDSDPV INSIPVGLGDAIITDGISEVHKSLSTSNLR
Sbjct: 241 FFSGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNLR 300

Query: 301 DQE---SSNSASVWSTTRWSLKPDLQVLSTAAITKPLFDGLPNPITGRRNKAALD 353
           DQ+   SS+SASVW+TTRWSLKPDLQ LS+A+ITKPLFDGLPNPITGRRNKAALD
Sbjct: 301 DQDSSGSSSSASVWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD 353

[Close]

BLAST of Sed0026870 vs. NCBI nr
Match: KAG7012173.1 (hypothetical protein SDJN02_24925 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 568.2 bits (1463), Expect = 5.1e-158
Identity = 305/357 (85.43%), Postives = 323/357 (90.48%), Query Frame = 0


Query: 1   MSPLNSSSSGGSGNGGSNYIEHQISRMDTLAGIAIKYGVEVADIKRLNGLAADLQLFALK 60
           MSP NSSSSG SG+GG NYIEHQIS+MDTLAGIAIKYGVEVADI+RLNGLAADLQ+FALK
Sbjct: 1   MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60

Query: 61  KVRIPLPGRHPPSPSLSDASSVTGSGSVNEETLHLGQPTNMLNSLQSLRLKSPNKEASPA 120
           K+RIPLPGRHPPSPSLSDAS+VTGSGSVNEE LHLGQPT+MLNSLQS RLKSPN  ASPA
Sbjct: 61  KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSLQSSRLKSPNPNASPA 120

Query: 121 MSTLQKYYGLNSRTVESASEGVEMALYRTENSNCIDDGVFPRTSVLSTPPPNIQKNSKIK 180
           MSTLQKYYGL SRTVESA EG+EMALYRTENSN IDDG+FP+TS LSTPP NI  +SK +
Sbjct: 121 MSTLQKYYGLVSRTVESAPEGMEMALYRTENSNFIDDGLFPKTSELSTPPSNI--HSKTR 180

Query: 181 KYAGSFWTENDSITEHLLLAGSGDGESEKSDEKLVRRRQKAENGAVTPERLLKGENSGGS 240
           KYAGSFW ENDSITEHLL    GDGE+EKSDEKLVRRRQKAENG  T ER  KGENSGGS
Sbjct: 181 KYAGSFWPENDSITEHLLCTEPGDGENEKSDEKLVRRRQKAENGVGTQERSSKGENSGGS 240

Query: 241 FFSVSNGKSLAMRLKSASRSMLLSDSDPVGINSIPVGLGDAIITDGISEVHKSLSTSNLR 300
           FFS SNGKSLAMRLKS SRSMLLSDSDPV INSIPVGLGDAIITDGISEVHKSLSTSNLR
Sbjct: 241 FFSGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNLR 300

Query: 301 DQE-----SSNSASVWSTTRWSLKPDLQVLSTAAITKPLFDGLPNPITGRRNKAALD 353
           DQ+     SS+SASVW+TTRWSLKPDLQ LS+A+ITKPLFDGLPNPITGRRNKAALD
Sbjct: 301 DQDSSSSSSSSSASVWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD 355

[Close]

BLAST of Sed0026870 vs. NCBI nr
Match: XP_022994944.1 (uncharacterized protein LOC111490532 [Cucurbita maxima])

HSP 1 Score: 565.8 bits (1457), Expect = 2.5e-157
Identity = 302/354 (85.31%), Postives = 323/354 (91.24%), Query Frame = 0


Query: 1   MSPLNSSSSGGSGNGGSNYIEHQISRMDTLAGIAIKYGVEVADIKRLNGLAADLQLFALK 60
           MSP NSSSSG SG+GG NYIEHQIS+MDTLAGIAIKYGVEVADI+RLNGLAADLQ+FALK
Sbjct: 1   MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60

Query: 61  KVRIPLPGRHPPSPSLSDASSVTGSGSVNEETLHLGQPTNMLNSLQSLRLKSPNKEASPA 120
           K+RIPLPGRHPPSPSLSDAS+VTGSGSVNEE LHLGQPT+MLNSLQS RLKSPN +ASPA
Sbjct: 61  KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSLQSSRLKSPNPKASPA 120

Query: 121 MSTLQKYYGLNSRTVESASEGVEMALYRTENSNCIDDGVFPRTSVLSTPPPNIQKNSKIK 180
           MSTLQKYYGL SRTVE+A +G+EMALY+TENSN IDDG+FP+TS LSTPP NI  +SK +
Sbjct: 121 MSTLQKYYGLVSRTVENAPKGMEMALYKTENSNFIDDGLFPKTSELSTPPSNI--HSKTR 180

Query: 181 KYAGSFWTENDSITEHLLLAGSGDGESEKSDEKLVRRRQKAENGAVTPERLLKGENSGGS 240
           KYAGS W ENDSITEHLL    GDGESEKSDEKLVRRRQKAENG   PER  KGENSGGS
Sbjct: 181 KYAGSIWPENDSITEHLLCTEPGDGESEKSDEKLVRRRQKAENGVGAPERSSKGENSGGS 240

Query: 241 FFSVSNGKSLAMRLKSASRSMLLSDSDPVGINSIPVGLGDAIITDGISEVHKSLSTSNLR 300
           FFS SNGKSLAMRLKS SRSMLLSDSDPV INSIPVGLGDAIITDGISEVHKSLSTSNLR
Sbjct: 241 FFSGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNLR 300

Query: 301 DQE--SSNSASVWSTTRWSLKPDLQVLSTAAITKPLFDGLPNPITGRRNKAALD 353
           DQ+  SS+SASVW+TTRWSLKPDLQ LS+A+ITKPLFDGLPNPITGRRNKAALD
Sbjct: 301 DQDSSSSSSASVWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD 352

[Close]

BLAST of Sed0026870 vs. NCBI nr
Match: XP_023542393.1 (uncharacterized protein LOC111802312 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 564.3 bits (1453), Expect = 7.3e-157
Identity = 302/355 (85.07%), Postives = 322/355 (90.70%), Query Frame = 0


Query: 1   MSPLNSSSSGGSGNGGSNYIEHQISRMDTLAGIAIKYGVEVADIKRLNGLAADLQLFALK 60
           MSP NSSSSG SG+GG NYIEHQIS+MDTLAGIAIKYGVEVADI+RLNGLAADLQ+FALK
Sbjct: 1   MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60

Query: 61  KVRIPLPGRHPPSPSLSDASSVTGSGSVNEETLHLGQPTNMLNSLQSLRLKSPNKEASPA 120
           K+RIPLPGRHPPSPSLSDAS+VTGSGSVNEE LHLGQPT+MLNSLQS RLKSPN +ASPA
Sbjct: 61  KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSLQSSRLKSPNPKASPA 120

Query: 121 MSTLQKYYGLNSRTVESASEGVEMALYRTENSNCIDDGVFPRTSVLSTPPPNIQKNSKIK 180
           MSTLQKYYGL SRTVE A EG+EMALY+TENSN IDDG+FP+TS LSTPP NI  +SK +
Sbjct: 121 MSTLQKYYGLVSRTVEKAPEGMEMALYKTENSNFIDDGLFPKTSELSTPPSNI--HSKTR 180

Query: 181 KYAGSFWTENDSITEHLLLAGSGDGESEKSDEKLVRRRQKAENGAVTPERLLKGENSGGS 240
           KYAGSFW ENDSITEHLL    GDGE+EKSDEKLVRRRQKAENG    ER  KGENSGGS
Sbjct: 181 KYAGSFWPENDSITEHLLCTEPGDGENEKSDEKLVRRRQKAENGVGISERSSKGENSGGS 240

Query: 241 FFSVSNGKSLAMRLKSASRSMLLSDSDPVGINSIPVGLGDAIITDGISEVHKSLSTSNLR 300
           FFS SNGKSLAMRLKS SRSMLLSDSDPV INSIPVGLGDAIITDGISEVHKSLSTSNLR
Sbjct: 241 FFSGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNLR 300

Query: 301 DQE---SSNSASVWSTTRWSLKPDLQVLSTAAITKPLFDGLPNPITGRRNKAALD 353
           DQ+   SS+SASVW+TTRWSLKPDLQ LS+A+ITKPLFDGLPNPITGRRNKAALD
Sbjct: 301 DQDSSSSSSSASVWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD 353

[Close]

BLAST of Sed0026870 vs. NCBI nr
Match: XP_022954511.1 (uncharacterized protein LOC111456756 [Cucurbita moschata])

HSP 1 Score: 559.7 bits (1441), Expect = 1.8e-155
Identity = 299/354 (84.46%), Postives = 321/354 (90.68%), Query Frame = 0


Query: 1   MSPLNSSSSGGSGNGGSNYIEHQISRMDTLAGIAIKYGVEVADIKRLNGLAADLQLFALK 60
           MSP NSSSSG SG+GG NYIEHQIS+MDTLAGIAIKYGVEVADI+RLNGLAADLQ+FALK
Sbjct: 1   MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60

Query: 61  KVRIPLPGRHPPSPSLSDASSVTGSGSVNEETLHLGQPTNMLNSLQSLRLKSPNKEASPA 120
           K+RIPLPGRHPPSPSLSDAS+VTGSGSVNEE LHLGQPT+MLNS  S RLKSPN +ASPA
Sbjct: 61  KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSSPSSRLKSPNPKASPA 120

Query: 121 MSTLQKYYGLNSRTVESASEGVEMALYRTENSNCIDDGVFPRTSVLSTPPPNIQKNSKIK 180
           MSTLQKYYGL SRTVE+A EG+EMALYRTE+SN IDDG+FP+TS LSTPP NI  +SK +
Sbjct: 121 MSTLQKYYGLVSRTVENAPEGMEMALYRTEDSNFIDDGLFPKTSELSTPPSNI--HSKTR 180

Query: 181 KYAGSFWTENDSITEHLLLAGSGDGESEKSDEKLVRRRQKAENGAVTPERLLKGENSGGS 240
           KYAGSFW EN+SITEHLL    GDGE+EKSDEKLVRRRQKAENG  TPER  KGENS G 
Sbjct: 181 KYAGSFWPENESITEHLLCTEPGDGENEKSDEKLVRRRQKAENGVGTPERSSKGENSSGG 240

Query: 241 FFSVSNGKSLAMRLKSASRSMLLSDSDPVGINSIPVGLGDAIITDGISEVHKSLSTSNLR 300
           FFS SNGKSLAMRLKS SRSMLLSDSDPV INSIPVGLGDAIITDGISEVHKSLSTSNLR
Sbjct: 241 FFSGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNLR 300

Query: 301 DQE--SSNSASVWSTTRWSLKPDLQVLSTAAITKPLFDGLPNPITGRRNKAALD 353
           DQ+  SS+SASVW+TTRWSLKPDLQ LS+A+ITKPLFDGLPNPITGRRNKAALD
Sbjct: 301 DQDSSSSSSASVWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD 352

[Close]

BLAST of Sed0026870 vs. ExPASy Swiss-Prot
Match: Q6P606 (LysM and putative peptidoglycan-binding domain-containing protein 4 OS=Danio rerio OX=7955 GN=lysmd4 PE=2 SV=2)

HSP 1 Score: 53.1 bits (126), Expect = 7.2e-06
Identity = 45/151 (29.80%), Postives = 73/151 (48.34%), Query Frame = 0


Query: 5   NSSSSGGSGNGGSNYIEHQISRMDTLAGIAIKYGVEVADIKRLNGLAADLQLFALKKVRI 64
           +SSS    G G    +E  IS  D L+ +A++YG +VADIKR+N L  +  ++ALK ++I
Sbjct: 55  DSSSKEKEGVGEMLLLERDISHEDNLSKLALQYGCKVADIKRVNNLFQEQDMYALKSIKI 114

Query: 65  PLPGR------------------HPPSPSLSDASSVTGSGSVNEETLHLGQPTNMLNSLQ 124
           P+                     H  +PS S  +SV+G   V E T +L +  N +  L 
Sbjct: 115 PVRKHGLLTEAISELRTPQQRPSHDAAPSNSAMASVSGRPQVQEYTNYLKEVDNDIERL- 174

Query: 125 SLRLKSPNKEASPAMSTLQKYYGLNSRTVES 138
            ++     +E   A S + + +G  S+ + S
Sbjct: 175 -IQNTDNVEEVFSASSRVSRGWGWRSQRLRS 203

[Close]

BLAST of Sed0026870 vs. ExPASy Swiss-Prot
Match: Q3B7I8 (LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Xenopus tropicalis OX=8364 GN=lysmd2 PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 1.0e-04
Identity = 24/48 (50.00%), Postives = 32/48 (66.67%), Query Frame = 0


Query: 19  YIEHQISRMDTLAGIAIKYGVEVADIKRLNGLAADLQLFALKKVRIPL 67
           YIEH++S  DTL GIA+KYGV +  IKR N L +   +F  K + IP+
Sbjct: 60  YIEHRLSPSDTLQGIALKYGVTMEQIKRANKLFSTDCIFLRKSLNIPV 107

[Close]

BLAST of Sed0026870 vs. ExPASy Swiss-Prot
Match: A0JNI1 (LysM and putative peptidoglycan-binding domain-containing protein 1 OS=Bos taurus OX=9913 GN=LYSMD1 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 2.3e-04
Identity = 22/47 (46.81%), Postives = 32/47 (68.09%), Query Frame = 0


Query: 20 IEHQISRMDTLAGIAIKYGVEVADIKRLNGLAADLQLFALKKVRIPL 67
          +EHQ++  DTLAG+A+KYGV +  IKR N L  +  +F  K + IP+
Sbjct: 40 LEHQLAPGDTLAGLALKYGVTMEQIKRANRLYTNDSIFLKKTLHIPI 86

[Close]

BLAST of Sed0026870 vs. ExPASy Swiss-Prot
Match: Q99LE3 (LysM and putative peptidoglycan-binding domain-containing protein 3 OS=Mus musculus OX=10090 GN=Lysmd3 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 2.3e-04
Identity = 30/83 (36.14%), Postives = 41/83 (49.40%), Query Frame = 0


Query: 24  ISRMDTLAGIAIKYGVEVADIKRLNGLAADLQLFALKKVRI-------------PLPGRH 83
           I   DTL  +A++Y   VADIKR+N L +D   FAL+ ++I             PL GRH
Sbjct: 69  IQEGDTLNAVALQYCCTVADIKRVNNLISDQDFFALRSIKIPVKRFSSLTETLHPLKGRH 128

Query: 84  ----PPSPSLSDASSVTGSGSVN 90
               PP P   +   V   GS++
Sbjct: 129 ILHPPPVPYFQEQDIVPADGSLS 151

[Close]

BLAST of Sed0026870 vs. ExPASy Swiss-Prot
Match: Q6DCC7 (LysM and putative peptidoglycan-binding domain-containing protein 4 OS=Xenopus laevis OX=8355 GN=lysmd4 PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 4.0e-04
Identity = 20/47 (42.55%), Postives = 33/47 (70.21%), Query Frame = 0


Query: 20  IEHQISRMDTLAGIAIKYGVEVADIKRLNGLAADLQLFALKKVRIPL 67
           +E  I+  D L  +A++YG +V+DIKR+N L  D  ++ALK ++IP+
Sbjct: 71  LERAITEDDNLNKLALQYGCKVSDIKRVNNLITDQDIYALKTIKIPV 117

[Close]

BLAST of Sed0026870 vs. ExPASy TrEMBL
Match: A0A6J1K4A2 (uncharacterized protein LOC111490532 OS=Cucurbita maxima OX=3661 GN=LOC111490532 PE=4 SV=1)

HSP 1 Score: 565.8 bits (1457), Expect = 1.2e-157
Identity = 302/354 (85.31%), Postives = 323/354 (91.24%), Query Frame = 0


Query: 1   MSPLNSSSSGGSGNGGSNYIEHQISRMDTLAGIAIKYGVEVADIKRLNGLAADLQLFALK 60
           MSP NSSSSG SG+GG NYIEHQIS+MDTLAGIAIKYGVEVADI+RLNGLAADLQ+FALK
Sbjct: 1   MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60

Query: 61  KVRIPLPGRHPPSPSLSDASSVTGSGSVNEETLHLGQPTNMLNSLQSLRLKSPNKEASPA 120
           K+RIPLPGRHPPSPSLSDAS+VTGSGSVNEE LHLGQPT+MLNSLQS RLKSPN +ASPA
Sbjct: 61  KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSLQSSRLKSPNPKASPA 120

Query: 121 MSTLQKYYGLNSRTVESASEGVEMALYRTENSNCIDDGVFPRTSVLSTPPPNIQKNSKIK 180
           MSTLQKYYGL SRTVE+A +G+EMALY+TENSN IDDG+FP+TS LSTPP NI  +SK +
Sbjct: 121 MSTLQKYYGLVSRTVENAPKGMEMALYKTENSNFIDDGLFPKTSELSTPPSNI--HSKTR 180

Query: 181 KYAGSFWTENDSITEHLLLAGSGDGESEKSDEKLVRRRQKAENGAVTPERLLKGENSGGS 240
           KYAGS W ENDSITEHLL    GDGESEKSDEKLVRRRQKAENG   PER  KGENSGGS
Sbjct: 181 KYAGSIWPENDSITEHLLCTEPGDGESEKSDEKLVRRRQKAENGVGAPERSSKGENSGGS 240

Query: 241 FFSVSNGKSLAMRLKSASRSMLLSDSDPVGINSIPVGLGDAIITDGISEVHKSLSTSNLR 300
           FFS SNGKSLAMRLKS SRSMLLSDSDPV INSIPVGLGDAIITDGISEVHKSLSTSNLR
Sbjct: 241 FFSGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNLR 300

Query: 301 DQE--SSNSASVWSTTRWSLKPDLQVLSTAAITKPLFDGLPNPITGRRNKAALD 353
           DQ+  SS+SASVW+TTRWSLKPDLQ LS+A+ITKPLFDGLPNPITGRRNKAALD
Sbjct: 301 DQDSSSSSSASVWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD 352

[Close]

BLAST of Sed0026870 vs. ExPASy TrEMBL
Match: A0A6J1GR40 (uncharacterized protein LOC111456756 OS=Cucurbita moschata OX=3662 GN=LOC111456756 PE=4 SV=1)

HSP 1 Score: 559.7 bits (1441), Expect = 8.8e-156
Identity = 299/354 (84.46%), Postives = 321/354 (90.68%), Query Frame = 0


Query: 1   MSPLNSSSSGGSGNGGSNYIEHQISRMDTLAGIAIKYGVEVADIKRLNGLAADLQLFALK 60
           MSP NSSSSG SG+GG NYIEHQIS+MDTLAGIAIKYGVEVADI+RLNGLAADLQ+FALK
Sbjct: 1   MSPSNSSSSGVSGHGGPNYIEHQISKMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60

Query: 61  KVRIPLPGRHPPSPSLSDASSVTGSGSVNEETLHLGQPTNMLNSLQSLRLKSPNKEASPA 120
           K+RIPLPGRHPPSPSLSDAS+VTGSGSVNEE LHLGQPT+MLNS  S RLKSPN +ASPA
Sbjct: 61  KLRIPLPGRHPPSPSLSDASTVTGSGSVNEEPLHLGQPTDMLNSSPSSRLKSPNPKASPA 120

Query: 121 MSTLQKYYGLNSRTVESASEGVEMALYRTENSNCIDDGVFPRTSVLSTPPPNIQKNSKIK 180
           MSTLQKYYGL SRTVE+A EG+EMALYRTE+SN IDDG+FP+TS LSTPP NI  +SK +
Sbjct: 121 MSTLQKYYGLVSRTVENAPEGMEMALYRTEDSNFIDDGLFPKTSELSTPPSNI--HSKTR 180

Query: 181 KYAGSFWTENDSITEHLLLAGSGDGESEKSDEKLVRRRQKAENGAVTPERLLKGENSGGS 240
           KYAGSFW EN+SITEHLL    GDGE+EKSDEKLVRRRQKAENG  TPER  KGENS G 
Sbjct: 181 KYAGSFWPENESITEHLLCTEPGDGENEKSDEKLVRRRQKAENGVGTPERSSKGENSSGG 240

Query: 241 FFSVSNGKSLAMRLKSASRSMLLSDSDPVGINSIPVGLGDAIITDGISEVHKSLSTSNLR 300
           FFS SNGKSLAMRLKS SRSMLLSDSDPV INSIPVGLGDAIITDGISEVHKSLSTSNLR
Sbjct: 241 FFSGSNGKSLAMRLKSVSRSMLLSDSDPVRINSIPVGLGDAIITDGISEVHKSLSTSNLR 300

Query: 301 DQE--SSNSASVWSTTRWSLKPDLQVLSTAAITKPLFDGLPNPITGRRNKAALD 353
           DQ+  SS+SASVW+TTRWSLKPDLQ LS+A+ITKPLFDGLPNPITGRRNKAALD
Sbjct: 301 DQDSSSSSSASVWATTRWSLKPDLQALSSASITKPLFDGLPNPITGRRNKAALD 352

[Close]

BLAST of Sed0026870 vs. ExPASy TrEMBL
Match: A0A5D3BJ15 (Peptidoglycan-binding LysM domain-containing protein, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002680 PE=4 SV=1)

HSP 1 Score: 545.8 bits (1405), Expect = 1.3e-151
Identity = 288/354 (81.36%), Postives = 318/354 (89.83%), Query Frame = 0


Query: 1   MSPLNSSSSGGSGNGGSNYIEHQISRMDTLAGIAIKYGVEVADIKRLNGLAADLQLFALK 60
           MSP NSS+SG +G+GGSNYIEHQISRMDTLAGIAIKYGVEVADI+RLNGLAADLQ+FALK
Sbjct: 1   MSPSNSSASGVNGHGGSNYIEHQISRMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60

Query: 61  KVRIPLPGRHPPSPSLSDASSVTGSGSVNEETLHLGQPTNMLNSLQSLRLKSPNKEASPA 120
           K+RIPLPGRHPPSPSLSDAS+VTG+GSVNEE LHLGQPTNMLNSLQS RLKSPN++ASPA
Sbjct: 61  KLRIPLPGRHPPSPSLSDASAVTGNGSVNEEPLHLGQPTNMLNSLQSWRLKSPNQKASPA 120

Query: 121 MSTLQKYYGLNSRTVESASEGVEMALYRTENSNCIDDGVFPRTSVLSTPPPNIQKNSKIK 180
           MSTLQKYYGL+S+T++++S  +EM++YRTENSN I DG+F RTSVLSTPPPNI   SK +
Sbjct: 121 MSTLQKYYGLSSQTLKTSSVDMEMSVYRTENSNSISDGLFSRTSVLSTPPPNIY--SKTR 180

Query: 181 KYAGSFWTENDSITEHLLLAGSGDGESEKSDEKLVRRRQKAE--NGAVTPERLLKGENSG 240
           KYAGSFWTENDSITEHLL   SGDGESEKSDEKLVRRRQKAE  NG  T ER LK ENS 
Sbjct: 181 KYAGSFWTENDSITEHLLRTDSGDGESEKSDEKLVRRRQKAEVDNGVTTAERSLKSENSN 240

Query: 241 GSFFSVSNGKSLAMRLKSASRSMLLSDSDPVGINSIPVGLGDAIITDGISEVHKSLSTSN 300
           GS+FS SNGKSLAMRLKS SR++L SDSDPV INSIPVGLGD IIT+G  EVHKSLSTSN
Sbjct: 241 GSYFSPSNGKSLAMRLKSVSRTVLSSDSDPVRINSIPVGLGDDIITNGTPEVHKSLSTSN 300

Query: 301 LRDQESSNSASVWSTTRWSLKPDLQVLSTAAITKPLFDGLPNPITGRRNKAALD 353
           LRDQ++SNS  VWST++WSLKPDLQ LS+ AI KPLFDGLPNPITGRRNKAALD
Sbjct: 301 LRDQDNSNSTFVWSTSKWSLKPDLQALSSVAIAKPLFDGLPNPITGRRNKAALD 352

[Close]

BLAST of Sed0026870 vs. ExPASy TrEMBL
Match: A0A1S3CUG8 (uncharacterized protein LOC103504667 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103504667 PE=4 SV=1)

HSP 1 Score: 545.8 bits (1405), Expect = 1.3e-151
Identity = 288/354 (81.36%), Postives = 318/354 (89.83%), Query Frame = 0


Query: 1   MSPLNSSSSGGSGNGGSNYIEHQISRMDTLAGIAIKYGVEVADIKRLNGLAADLQLFALK 60
           MSP NSS+SG +G+GGSNYIEHQISRMDTLAGIAIKYGVEVADI+RLNGLAADLQ+FALK
Sbjct: 1   MSPSNSSASGVNGHGGSNYIEHQISRMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60

Query: 61  KVRIPLPGRHPPSPSLSDASSVTGSGSVNEETLHLGQPTNMLNSLQSLRLKSPNKEASPA 120
           K+RIPLPGRHPPSPSLSDAS+VTG+GSVNEE LHLGQPTNMLNSLQS RLKSPN++ASPA
Sbjct: 61  KLRIPLPGRHPPSPSLSDASAVTGNGSVNEEPLHLGQPTNMLNSLQSWRLKSPNQKASPA 120

Query: 121 MSTLQKYYGLNSRTVESASEGVEMALYRTENSNCIDDGVFPRTSVLSTPPPNIQKNSKIK 180
           MSTLQKYYGL+S+T++++S  +EM++YRTENSN I DG+F RTSVLSTPPPNI   SK +
Sbjct: 121 MSTLQKYYGLSSQTLKTSSVDMEMSVYRTENSNSISDGLFSRTSVLSTPPPNIY--SKTR 180

Query: 181 KYAGSFWTENDSITEHLLLAGSGDGESEKSDEKLVRRRQKAE--NGAVTPERLLKGENSG 240
           KYAGSFWTENDSITEHLL   SGDGESEKSDEKLVRRRQKAE  NG  T ER LK ENS 
Sbjct: 181 KYAGSFWTENDSITEHLLRTDSGDGESEKSDEKLVRRRQKAEVDNGVTTAERSLKSENSN 240

Query: 241 GSFFSVSNGKSLAMRLKSASRSMLLSDSDPVGINSIPVGLGDAIITDGISEVHKSLSTSN 300
           GS+FS SNGKSLAMRLKS SR++L SDSDPV INSIPVGLGD IIT+G  EVHKSLSTSN
Sbjct: 241 GSYFSPSNGKSLAMRLKSVSRTVLSSDSDPVRINSIPVGLGDDIITNGTPEVHKSLSTSN 300

Query: 301 LRDQESSNSASVWSTTRWSLKPDLQVLSTAAITKPLFDGLPNPITGRRNKAALD 353
           LRDQ++SNS  VWST++WSLKPDLQ LS+ AI KPLFDGLPNPITGRRNKAALD
Sbjct: 301 LRDQDNSNSTFVWSTSKWSLKPDLQALSSVAIAKPLFDGLPNPITGRRNKAALD 352

[Close]

BLAST of Sed0026870 vs. ExPASy TrEMBL
Match: A0A0A0LQZ4 (LysM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G043110 PE=4 SV=1)

HSP 1 Score: 543.1 bits (1398), Expect = 8.5e-151
Identity = 288/354 (81.36%), Postives = 316/354 (89.27%), Query Frame = 0


Query: 1   MSPLNSSSSGGSGNGGSNYIEHQISRMDTLAGIAIKYGVEVADIKRLNGLAADLQLFALK 60
           MSP NSS SG +G+GGSNYIEHQISRMDTLAGIAIKYGVEVADI+RLNGLAADLQ+FALK
Sbjct: 1   MSPSNSSPSGVNGHGGSNYIEHQISRMDTLAGIAIKYGVEVADIRRLNGLAADLQMFALK 60

Query: 61  KVRIPLPGRHPPSPSLSDASSVTGSGSVNEETLHLGQPTNMLNSLQSLRLKSPNKEASPA 120
           K+RIPLPGRHPPSPSLSD S+VTG+GSVNEE LHLGQPTNMLNSLQS RLKSPN++ASPA
Sbjct: 61  KLRIPLPGRHPPSPSLSDGSAVTGNGSVNEEPLHLGQPTNMLNSLQSWRLKSPNQKASPA 120

Query: 121 MSTLQKYYGLNSRTVESASEGVEMALYRTENSNCIDDGVFPRTSVLSTPPPNIQKNSKIK 180
           MSTLQKYYGL+S+T+E++S  +EM++YRTENSN   DG+F RTSVLSTPP NI   SK +
Sbjct: 121 MSTLQKYYGLSSQTLETSSVDMEMSVYRTENSNSTGDGLFSRTSVLSTPPLNIY--SKTR 180

Query: 181 KYAGSFWTENDSITEHLLLAGSGDGESEKSDEKLVRRRQKAE--NGAVTPERLLKGENSG 240
           KYAGSFWT+NDSITEHLL   SGD ESEKSDEKLVRRRQKAE  NG  T ER LKGENS 
Sbjct: 181 KYAGSFWTDNDSITEHLLRTDSGDVESEKSDEKLVRRRQKAEVDNGVTTTERSLKGENSN 240

Query: 241 GSFFSVSNGKSLAMRLKSASRSMLLSDSDPVGINSIPVGLGDAIITDGISEVHKSLSTSN 300
           G++FS SNGKSLAMRLKS SR+ LLSDSDPV INSIPVGLGD IITDG SEVHKSLSTSN
Sbjct: 241 GNYFSPSNGKSLAMRLKSGSRTALLSDSDPVWINSIPVGLGDDIITDGTSEVHKSLSTSN 300

Query: 301 LRDQESSNSASVWSTTRWSLKPDLQVLSTAAITKPLFDGLPNPITGRRNKAALD 353
           LRDQ++SNS SVWST +WSLKPDLQ LS+ AI+KPLFDGLPNPITGRRNKAALD
Sbjct: 301 LRDQDNSNSTSVWSTAKWSLKPDLQALSSVAISKPLFDGLPNPITGRRNKAALD 352

[Close]

BLAST of Sed0026870 vs. TAIR 10
Match: AT5G08200.1 (peptidoglycan-binding LysM domain-containing protein )

HSP 1 Score: 237.3 bits (604), Expect = 1.9e-62
Identity = 168/368 (45.65%), Postives = 224/368 (60.87%), Query Frame = 0


Query: 2   SPLNSSSS---GGSGNGGSNYIEHQISRMDTLAGIAIKYGVEVADIKRLNGLAADLQLFA 61
           SP  SSSS    GS +    YIEH+IS+ DTLAG+AIKYGVEVAD+K++N L  DLQ+FA
Sbjct: 57  SPPPSSSSPPFHGSNSPDRGYIEHRISKFDTLAGVAIKYGVEVADVKKMNNLVTDLQMFA 116

Query: 62  LKKVRIPLPGRHPPSPSLSDASSVTGSG-SVNEETLHLGQPTNMLNSLQSLRLKSPNKEA 121
           LK ++IPLPGRHPPSP LS+ S   G G S +E          + +S QSLRLKS  K+ 
Sbjct: 117 LKSLQIPLPGRHPPSPCLSNGSLNHGEGCSCHEPESPNHSEQEVFDSFQSLRLKSSEKKV 176

Query: 122 SPAMSTLQKYYGLN--SRTVESASEGVEMALYRTENSNCI----DDGVFPRTSVLSTPPP 181
           SPAM +LQ YYGL    RTV S     EM  Y+TE S+ I    D+G        +TP  
Sbjct: 177 SPAMYSLQGYYGLKPADRTV-SDGGCFEMGNYKTETSHHIFNNGDNGYLRPFPSTNTPLN 236

Query: 182 NIQKNSKIKKYAGSFWTENDSITEHLLLAGSGDGESEKSDEKLVRRRQKAEN--GAVTPE 241
           + +K+  +          N  I E  +     +   E + +K +RRRQK+E    + TPE
Sbjct: 237 HHRKSRSL---------VNALIEE--VNQSPDNNTQEPTSDKFMRRRQKSEADFSSRTPE 296

Query: 242 RLLKGEN--SGGSFFSVSNGKSLAMRLKSASRSMLLSDSDPVGINSIPVGLGDAIITDGI 301
            +LK EN  S G F S++ GK LA+R K++SR+ L ++S+    N + + L DA ++D  
Sbjct: 297 LVLKEENGSSNGGFLSIA-GKGLALRSKASSRTNLAAESENGNFNPVSMNLMDAPVSDSF 356

Query: 302 SEVHKSLSTSNLRDQE---SSNSASVWSTTRWSLKPDLQVLSTAAITKPLFDGLPNPITG 353
           S V KS S S+L+D +   ++ S S+W T++WSLKPDL  L+ AAIT  +FDGLP P+TG
Sbjct: 357 SSVRKSSSASSLQDPDGNSNNGSLSLWPTSKWSLKPDL--LTPAAITSSIFDGLPKPLTG 409

[Close]

BLAST of Sed0026870 vs. TAIR 10
Match: AT5G23130.1 (Peptidoglycan-binding LysM domain-containing protein )

HSP 1 Score: 228.4 bits (581), Expect = 8.9e-60
Identity = 157/357 (43.98%), Postives = 221/357 (61.90%), Query Frame = 0


Query: 6   SSSSGGSGNGGSNYIEHQISRMDTLAGIAIKYGVEVADIKRLNGLAADLQLFALKKVRIP 65
           +SS   S +  + YIEH++S+ DTLAGIAIKYGVEVADI +LNGL  DLQ+FAL+ +RIP
Sbjct: 56  TSSPPSSASTCAGYIEHRVSKFDTLAGIAIKYGVEVADITKLNGLVTDLQMFALESLRIP 115

Query: 66  LPGRHPPSPSLSDASSVTGS--GSVNEETLHLGQPTNMLNSLQSLRLKSPNKEASPAMST 125
           LPGRHPPSP LS+ S   G         +   G   ++ +S QSLRL    K+ SPAM++
Sbjct: 116 LPGRHPPSPCLSNGSLNHGEDWSEQASSSASNGNHQDVFDSFQSLRLNHSEKKISPAMNS 175

Query: 126 LQKYYGLNSRTVESASEGVEMALYRTENSNCIDDG----VFPRTSVLSTPPPNIQKNSKI 185
           LQ YYGL  +    ASEG  MA+Y+ E S   D+      FP T   STP  + +K+  +
Sbjct: 176 LQGYYGLKPKN-RRASEGFGMAVYKNEASQLQDNDQYLTPFPAT---STPLSHHRKSRSL 235

Query: 186 KKYAGSFWTENDSITEHLLLAGSGDGESEKSDEKLVRRRQKAEN--GAVTPERLLKGEN- 245
                +   ++ + ++      +G GE   +D K +RRRQK+E    +  PE LLK EN 
Sbjct: 236 VDAVIAEVNQSPNPSK------AGGGEVNSTD-KPMRRRQKSEADFSSRAPELLLKEENR 295

Query: 246 SGGSFFSVSNGKSLAMRLKSASRSMLLSDSDPVGINSIPVGLGDAIITDGISEVHKSLST 305
           S    FS   GK+LA+R K++SR+ L +++    +NSIP+ L DA + D  S V KS+S 
Sbjct: 296 SSSGAFSAIAGKNLALRSKASSRANLSAETR--HLNSIPINLMDAPVGDSFSSVRKSVSA 355

Query: 306 SNLRDQE-SSNSASVWSTTRWSLKPDLQVLSTAAITKPLFDGLPNPITGRRNKAALD 353
           S+L++   +SN +S+W T++W+LKP+L  L+  A+   +FDGLP P+TGRRNK A+D
Sbjct: 356 SSLQEPNCNSNGSSLWPTSKWTLKPEL--LTQVAMASSIFDGLPKPLTGRRNKKAVD 397

[Close]

BLAST of Sed0026870 vs. TAIR 10
Match: AT1G55000.1 (peptidoglycan-binding LysM domain-containing protein )

HSP 1 Score: 46.2 bits (108), Expect = 6.3e-05
Identity = 19/47 (40.43%), Postives = 33/47 (70.21%), Query Frame = 0


Query: 20  IEHQISRMDTLAGIAIKYGVEVADIKRLNGLAADLQLFALKKVRIPL 67
           I H+I R D++  +A+KY V+V DIKRLN + +D  +++  ++ IP+
Sbjct: 74  ISHRICRGDSVTSLAVKYAVQVMDIKRLNNMMSDHGIYSRDRLLIPI 120

[Close]

BLAST of Sed0026870 vs. TAIR 10
Match: AT1G55000.2 (peptidoglycan-binding LysM domain-containing protein )

HSP 1 Score: 46.2 bits (108), Expect = 6.3e-05
Identity = 19/47 (40.43%), Postives = 33/47 (70.21%), Query Frame = 0


Query: 20  IEHQISRMDTLAGIAIKYGVEVADIKRLNGLAADLQLFALKKVRIPL 67
           I H+I R D++  +A+KY V+V DIKRLN + +D  +++  ++ IP+
Sbjct: 74  ISHRICRGDSVTSLAVKYAVQVMDIKRLNNMMSDHGIYSRDRLLIPI 120

[Close]

BLAST of Sed0026870 vs. TAIR 10
Match: AT1G55000.3 (peptidoglycan-binding LysM domain-containing protein )

HSP 1 Score: 46.2 bits (108), Expect = 6.3e-05
Identity = 19/47 (40.43%), Postives = 33/47 (70.21%), Query Frame = 0


Query: 20  IEHQISRMDTLAGIAIKYGVEVADIKRLNGLAADLQLFALKKVRIPL 67
           I H+I R D++  +A+KY V+V DIKRLN + +D  +++  ++ IP+
Sbjct: 74  ISHRICRGDSVTSLAVKYAVQVMDIKRLNNMMSDHGIYSRDRLLIPI 120

The following BLAST results are available for this feature:

BLAST of Sed0026870 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6572989.1	3.5e-159	85.92	LysM and putative peptidoglycan-binding domain-containing protein 4, partial [Cu...	[more]
KAG7012173.1	5.1e-158	85.43	hypothetical protein SDJN02_24925 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022994944.1	2.5e-157	85.31	uncharacterized protein LOC111490532 [Cucurbita maxima]	[more]
XP_023542393.1	7.3e-157	85.07	uncharacterized protein LOC111802312 [Cucurbita pepo subsp. pepo]	[more]
XP_022954511.1	1.8e-155	84.46	uncharacterized protein LOC111456756 [Cucurbita moschata]	[more]

BLAST of Sed0026870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6P606	7.2e-06	29.80	LysM and putative peptidoglycan-binding domain-containing protein 4 OS=Danio rer...	[more]
Q3B7I8	1.0e-04	50.00	LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Xenopus t...	[more]
A0JNI1	2.3e-04	46.81	LysM and putative peptidoglycan-binding domain-containing protein 1 OS=Bos tauru...	[more]
Q99LE3	2.3e-04	36.14	LysM and putative peptidoglycan-binding domain-containing protein 3 OS=Mus muscu...	[more]
Q6DCC7	4.0e-04	42.55	LysM and putative peptidoglycan-binding domain-containing protein 4 OS=Xenopus l...	[more]

BLAST of Sed0026870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K4A2	1.2e-157	85.31	uncharacterized protein LOC111490532 OS=Cucurbita maxima OX=3661 GN=LOC111490532...	[more]
A0A6J1GR40	8.8e-156	84.46	uncharacterized protein LOC111456756 OS=Cucurbita moschata OX=3662 GN=LOC1114567...	[more]
A0A5D3BJ15	1.3e-151	81.36	Peptidoglycan-binding LysM domain-containing protein, putative isoform 1 OS=Cucu...	[more]
A0A1S3CUG8	1.3e-151	81.36	uncharacterized protein LOC103504667 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0LQZ4	8.5e-151	81.36	LysM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G043110 PE=4 S...	[more]

BLAST of Sed0026870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08200.1	1.9e-62	45.65	peptidoglycan-binding LysM domain-containing protein	[more]
AT5G23130.1	8.9e-60	43.98	Peptidoglycan-binding LysM domain-containing protein	[more]
AT1G55000.1	6.3e-05	40.43	peptidoglycan-binding LysM domain-containing protein	[more]
AT1G55000.2	6.3e-05	40.43	peptidoglycan-binding LysM domain-containing protein	[more]
AT1G55000.3	6.3e-05	40.43	peptidoglycan-binding LysM domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR20932:SF36	PEPTIDOGLYCAN-BINDING LYSM DOMAIN-CONTAINING PROTEIN	coord: 2..252
IPR045030	LysM and putative peptidoglycan-binding domain-containing protein 1-4	PANTHER	PTHR20932	LOC443603 PROTEIN-RELATED	coord: 2..252

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0026870.1	Sed0026870.1	mRNA
Sed0026870.2	Sed0026870.2	mRNA