Sed0026839 (gene) Chayote v1

Overview


Name	Sed0026839
Type	gene
Organism	Sechium edule (Chayote v1)
Description	B-like cyclin
Location	LG13: 22857081 .. 22858770 (+)
RNA-Seq Expression	Sed0026839
Synteny	Sed0026839

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAATCGGCTTCTAATTGGCTTTTAGATTATGGGGTTAGTTTTAGGACTGTGTTCATGGCCCCATGAGGACATTGTACGAGTGTCACGTGTCCATTGATTATATTGCATGGCCCATGATTTATGTCTGCTGACTGCTGATTATAAGCACAAGAGGCTCCCAATTCAGAAGCATATCTTCCTTCCAAACCCTGCCCTCACCCATGAGAAGAAAATGAGAAACTATAGGATGGCTAAACAGCATTGTTACCCAATCTCAATTCAACACTCAATTTCAGGTCACCAAAAACCTTCATTTCTTCTTGATTCCCTCTATTGTTTAGAGGAAGGGATTGGAGATAACCTCATACCTCCAAAGGACCAAGCTTTCTCAGTAAATGTTAACATCAATTCCCCAAATTCTGTCCTCTTGTCAGAGAGGGACTTTCTTTGGGAACATGAAGAATTGGTGTCTCTGTTCTCTAAAGAGAATGAACACAAACTCCACAACACTCTCCCACTTAATCCCTCTTTAGCAGCGGCTCGCTCCAAGGCTGTCAATTGGATTCTAAAGGTCAATTCTCATTACCATTTCACTGCGCTCACCGCCGTTTTCGCCGTCGATTATGTCGATAGGTTTCTCTCCAGCCCCCATTTTCAAACTGGTAAGCCCTGGATGACTCATCTCACCGCCATTGCTTGTTTATCGCTCGCCGCTAAAGTCGAGGAAACTCGAGTTCCTCTTCTTTTAGACCTTCAGGTAAACCCCACATCAGATTCAAATCTTCACATTTCTTACCATTGATTCATGTTAAGAATTGGGTTGTTTTGTATTTTGTTGTAGGTGGAGGAAAATGAATACTATTTTGAAGCTAAAACCATTGCAAGAATGGAAATTCTTGTTCTATCTACGCTTGTTTGGAGAATGAATCCTGTGAACCCACTTTCATTTCTGGACTACATTGTCAGGCGGCTAGGCCTCAAGGACCAGCTCTGTTCTGAATTTCTCTGTAGATGTGAACAATTACTTCTCTCTGTCATTTTAGGTAAGCTACAAAAATTCACATAATTAATGTCAAAATTTGAATTCCCTCAATTATTAATGTTCTCTAATTTTCAATACCCAGATTCTAGATTTGTATGTTTTCTTCCATCAGTAATAGCCAGCGCCATTATTTTTCAAGTTATCAACGACATTGAACCGAACGTCGCCGCAAAATACCACGATCAGCTTCTCGGTTTTCTCCGAATCGACAAGGTTTCTTTTTGCTTTTGTTCTTGTTATCTTGTTTTTTTGCAAACGAAGTGTCTCAAGTTTGTCATGTAATTGACTCATTGTTGTATTGCTTGCACTGTTTGTTCTGGCAGGATAAGGTGGAGGATTGTTCACGATTCATCTTAGAAGTATCATCGAGAGGACGATACCGAAACGAGTGTAAGAATCAACGAAGATTTGGCGTAATCAACATGTCGTGCAGCTCCAATGGTTGGGATCGGAATGTCGACAGTGCTGCTGTGTCCTCGCCGGAGGCAGCGACGAAGAAGAGGAGAATTGATGAACAGTGTCCGTAGAGGCTGAATTTTCTGCAGCATTATTTGATCCTTCGCTTCATTTAATTAGGCTTAAAGCTACTTGTACTTTTTGTTTCTCTCGTACACTAAAAAGCGTACGTTTAATAATTAATATATAATTTCTTATATTATTGAGTCAAA

mRNA sequence

CTAATCGGCTTCTAATTGGCTTTTAGATTATGGGGTTAGTTTTAGGACTGTGTTCATGGCCCCATGAGGACATTGTACGAGTGTCACGTGTCCATTGATTATATTGCATGGCCCATGATTTATGTCTGCTGACTGCTGATTATAAGCACAAGAGGCTCCCAATTCAGAAGCATATCTTCCTTCCAAACCCTGCCCTCACCCATGAGAAGAAAATGAGAAACTATAGGATGGCTAAACAGCATTGTTACCCAATCTCAATTCAACACTCAATTTCAGGTCACCAAAAACCTTCATTTCTTCTTGATTCCCTCTATTGTTTAGAGGAAGGGATTGGAGATAACCTCATACCTCCAAAGGACCAAGCTTTCTCAGTAAATGTTAACATCAATTCCCCAAATTCTGTCCTCTTGTCAGAGAGGGACTTTCTTTGGGAACATGAAGAATTGGTGTCTCTGTTCTCTAAAGAGAATGAACACAAACTCCACAACACTCTCCCACTTAATCCCTCTTTAGCAGCGGCTCGCTCCAAGGCTGTCAATTGGATTCTAAAGGTCAATTCTCATTACCATTTCACTGCGCTCACCGCCGTTTTCGCCGTCGATTATGTCGATAGGTTTCTCTCCAGCCCCCATTTTCAAACTGGTAAGCCCTGGATGACTCATCTCACCGCCATTGCTTGTTTATCGCTCGCCGCTAAAGTCGAGGAAACTCGAGTTCCTCTTCTTTTAGACCTTCAGGTGGAGGAAAATGAATACTATTTTGAAGCTAAAACCATTGCAAGAATGGAAATTCTTGTTCTATCTACGCTTGTTTGGAGAATGAATCCTGTGAACCCACTTTCATTTCTGGACTACATTGTCAGGCGGCTAGGCCTCAAGGACCAGCTCTGTTCTGAATTTCTCTGTAGATGTGAACAATTACTTCTCTCTGTCATTTTAGATTCTAGATTTGTATGTTTTCTTCCATCAGTAATAGCCAGCGCCATTATTTTTCAAGTTATCAACGACATTGAACCGAACGTCGCCGCAAAATACCACGATCAGCTTCTCGGTTTTCTCCGAATCGACAAGGATAAGGTGGAGGATTGTTCACGATTCATCTTAGAAGTATCATCGAGAGGACGATACCGAAACGAGTGTAAGAATCAACGAAGATTTGGCGTAATCAACATGTCGTGCAGCTCCAATGGTTGGGATCGGAATGTCGACAGTGCTGCTGTGTCCTCGCCGGAGGCAGCGACGAAGAAGAGGAGAATTGATGAACAGTGTCCGTAGAGGCTGAATTTTCTGCAGCATTATTTGATCCTTCGCTTCATTTAATTAGGCTTAAAGCTACTTGTACTTTTTGTTTCTCTCGTACACTAAAAAGCGTACGTTTAATAATTAATATATAATTTCTTATATTATTGAGTCAAA

Coding sequence (CDS)

ATGGCCCATGATTTATGTCTGCTGACTGCTGATTATAAGCACAAGAGGCTCCCAATTCAGAAGCATATCTTCCTTCCAAACCCTGCCCTCACCCATGAGAAGAAAATGAGAAACTATAGGATGGCTAAACAGCATTGTTACCCAATCTCAATTCAACACTCAATTTCAGGTCACCAAAAACCTTCATTTCTTCTTGATTCCCTCTATTGTTTAGAGGAAGGGATTGGAGATAACCTCATACCTCCAAAGGACCAAGCTTTCTCAGTAAATGTTAACATCAATTCCCCAAATTCTGTCCTCTTGTCAGAGAGGGACTTTCTTTGGGAACATGAAGAATTGGTGTCTCTGTTCTCTAAAGAGAATGAACACAAACTCCACAACACTCTCCCACTTAATCCCTCTTTAGCAGCGGCTCGCTCCAAGGCTGTCAATTGGATTCTAAAGGTCAATTCTCATTACCATTTCACTGCGCTCACCGCCGTTTTCGCCGTCGATTATGTCGATAGGTTTCTCTCCAGCCCCCATTTTCAAACTGGTAAGCCCTGGATGACTCATCTCACCGCCATTGCTTGTTTATCGCTCGCCGCTAAAGTCGAGGAAACTCGAGTTCCTCTTCTTTTAGACCTTCAGGTGGAGGAAAATGAATACTATTTTGAAGCTAAAACCATTGCAAGAATGGAAATTCTTGTTCTATCTACGCTTGTTTGGAGAATGAATCCTGTGAACCCACTTTCATTTCTGGACTACATTGTCAGGCGGCTAGGCCTCAAGGACCAGCTCTGTTCTGAATTTCTCTGTAGATGTGAACAATTACTTCTCTCTGTCATTTTAGATTCTAGATTTGTATGTTTTCTTCCATCAGTAATAGCCAGCGCCATTATTTTTCAAGTTATCAACGACATTGAACCGAACGTCGCCGCAAAATACCACGATCAGCTTCTCGGTTTTCTCCGAATCGACAAGGATAAGGTGGAGGATTGTTCACGATTCATCTTAGAAGTATCATCGAGAGGACGATACCGAAACGAGTGTAAGAATCAACGAAGATTTGGCGTAATCAACATGTCGTGCAGCTCCAATGGTTGGGATCGGAATGTCGACAGTGCTGCTGTGTCCTCGCCGGAGGCAGCGACGAAGAAGAGGAGAATTGATGAACAGTGTCCGTAG

Protein sequence

MAHDLCLLTADYKHKRLPIQKHIFLPNPALTHEKKMRNYRMAKQHCYPISIQHSISGHQKPSFLLDSLYCLEEGIGDNLIPPKDQAFSVNVNINSPNSVLLSERDFLWEHEELVSLFSKENEHKLHNTLPLNPSLAAARSKAVNWILKVNSHYHFTALTAVFAVDYVDRFLSSPHFQTGKPWMTHLTAIACLSLAAKVEETRVPLLLDLQVEENEYYFEAKTIARMEILVLSTLVWRMNPVNPLSFLDYIVRRLGLKDQLCSEFLCRCEQLLLSVILDSRFVCFLPSVIASAIIFQVINDIEPNVAAKYHDQLLGFLRIDKDKVEDCSRFILEVSSRGRYRNECKNQRRFGVINMSCSSNGWDRNVDSAAVSSPEAATKKRRIDEQCP

Homology

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BLAST of Sed0026839 vs. NCBI nr
Match: XP_022936814.1 (cyclin-D3-3-like [Cucurbita moschata])

HSP 1 Score: 555.4 bits (1430), Expect = 3.8e-154
Identity = 284/355 (80.00%), Postives = 311/355 (87.61%), Query Frame = 0


Query: 36  MRNYRMAKQHCYPISIQHSISGHQKPSFLLDSLYCL--EEGIGDNLIPPKDQAFSVNVNI 95
           MRNYRMAK+HCYP+SI HSISGHQ  S  LDSLYCL  EE IGD    PK +AFS+NVN+
Sbjct: 1   MRNYRMAKRHCYPLSIAHSISGHQNGSLFLDSLYCLEEEEEIGDGHSQPKIEAFSINVNV 60

Query: 96  NSPNSVLLSERDFLWEHEELVSLFSKENEHKLHNTLPLNPSLAAARSKAVNWILKVNSHY 155
           +SPNSV LS+RDFLWE EELVSLFSKEN +KLH+ LP NPSLAAARS AV WILKVN+HY
Sbjct: 61  DSPNSVFLSDRDFLWEDEELVSLFSKENRNKLHDALPHNPSLAAARSDAVEWILKVNAHY 120

Query: 156 HFTALTAVFAVDYVDRFLSSPHFQTGKPWMTHLTAIACLSLAAKVEETRVPLLLDLQVEE 215
            FTALTAV AVDYVDRFLSSPHFQ  KPWMTHLTAIACLSLAAKVEET VPLLLDLQVEE
Sbjct: 121 SFTALTAVLAVDYVDRFLSSPHFQIDKPWMTHLTAIACLSLAAKVEETEVPLLLDLQVEE 180

Query: 216 NEYYFEAKTIARMEILVLSTLVWRMNPVNPLSFLDYIVRRLGLKDQLCSEFLCRCEQLLL 275
           N Y+FEAKTI RMEILVLSTL+WRMNPVNPLSFLDYIVRRLG KDQLCSEFLC+CE+LLL
Sbjct: 181 NRYFFEAKTIKRMEILVLSTLLWRMNPVNPLSFLDYIVRRLGFKDQLCSEFLCKCERLLL 240

Query: 276 SVILDSRFVCFLPSVIASAIIFQVINDIEPNVAAKYHDQLLGFLRIDKDKVEDCSRFILE 335
           SVILDSRFVCFLPS+IASAIIFQVIND EP+VAAKYHDQLLGFL+IDK+KVEDCS+FI+E
Sbjct: 241 SVILDSRFVCFLPSMIASAIIFQVINDKEPHVAAKYHDQLLGFLQIDKNKVEDCSQFIIE 300

Query: 336 VSSRGRYRNECKNQRRFGVINMSCSSNGWDRNVDSAAVSSPEAATKKRRIDEQCP 389
            SSRG       N++RFG+++MSCSSNG  +NVD   VSSPE ATKKR+IDEQ P
Sbjct: 301 ASSRGH-----TNKQRFGLVDMSCSSNGRTQNVD-RVVSSPETATKKRKIDEQPP 349

[Close]

BLAST of Sed0026839 vs. NCBI nr
Match: XP_022977063.1 (cyclin-D3-1-like [Cucurbita maxima])

HSP 1 Score: 552.7 bits (1423), Expect = 2.4e-153
Identity = 282/355 (79.44%), Postives = 310/355 (87.32%), Query Frame = 0


Query: 36  MRNYRMAKQHCYPISIQHSISGHQKPSFLLDSLYCLEE--GIGDNLIPPKDQAFSVNVNI 95
           MRNYRMAK+HCYP+S+ HSISGHQ  S  LDSLYCLEE  GIGD    PK +AFS+NVN+
Sbjct: 1   MRNYRMAKRHCYPLSVAHSISGHQNVSLFLDSLYCLEEEDGIGDGHSQPKIEAFSINVNV 60

Query: 96  NSPNSVLLSERDFLWEHEELVSLFSKENEHKLHNTLPLNPSLAAARSKAVNWILKVNSHY 155
           +SPNSV LS+RDFLWE EELVSLFSKEN +KLH+ LP NPSLAAARS AV WILKVN+HY
Sbjct: 61  DSPNSVFLSDRDFLWEDEELVSLFSKENRNKLHDALPHNPSLAAARSDAVEWILKVNAHY 120

Query: 156 HFTALTAVFAVDYVDRFLSSPHFQTGKPWMTHLTAIACLSLAAKVEETRVPLLLDLQVEE 215
            FT LTAV AVDYVDRFLSSPHFQ  KPWMTHLTAIACLSLAAKVEET VPLLLDLQVEE
Sbjct: 121 SFTTLTAVLAVDYVDRFLSSPHFQIDKPWMTHLTAIACLSLAAKVEETEVPLLLDLQVEE 180

Query: 216 NEYYFEAKTIARMEILVLSTLVWRMNPVNPLSFLDYIVRRLGLKDQLCSEFLCRCEQLLL 275
           N Y+FEAKTI RMEILVLSTL+WRMNPVNPLSFLDYIVRRLG KDQLCSEFLC+CE+LLL
Sbjct: 181 NGYFFEAKTIKRMEILVLSTLLWRMNPVNPLSFLDYIVRRLGFKDQLCSEFLCKCERLLL 240

Query: 276 SVILDSRFVCFLPSVIASAIIFQVINDIEPNVAAKYHDQLLGFLRIDKDKVEDCSRFILE 335
           SVILDSRFVCFLPS+IASAIIFQVIND EP+VAAKY DQLLGFL+IDK+KVEDCS+FI+E
Sbjct: 241 SVILDSRFVCFLPSLIASAIIFQVINDKEPHVAAKYQDQLLGFLQIDKNKVEDCSQFIIE 300

Query: 336 VSSRGRYRNECKNQRRFGVINMSCSSNGWDRNVDSAAVSSPEAATKKRRIDEQCP 389
            SSRG       N++RFG+++MSCSSNG  +NVD   VSSPE ATKKR+IDEQ P
Sbjct: 301 ASSRGH-----TNKQRFGLVDMSCSSNGRTQNVD-RVVSSPETATKKRKIDEQPP 349

[Close]

BLAST of Sed0026839 vs. NCBI nr
Match: KAG7024278.1 (Cyclin-D3-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 552.4 bits (1422), Expect = 3.2e-153
Identity = 283/355 (79.72%), Postives = 310/355 (87.32%), Query Frame = 0


Query: 36  MRNYRMAKQHCYPISIQHSISGHQKPSFLLDSLYCL--EEGIGDNLIPPKDQAFSVNVNI 95
           MRNYRMAK+HCYP+SI HSISGHQ  S  LDSLYCL  EE IGD    PK +AFS+NVN+
Sbjct: 1   MRNYRMAKRHCYPLSIAHSISGHQNGSLFLDSLYCLEEEEEIGDGHSQPKIEAFSINVNV 60

Query: 96  NSPNSVLLSERDFLWEHEELVSLFSKENEHKLHNTLPLNPSLAAARSKAVNWILKVNSHY 155
           +SPNSV LS+RDFLWE EELVSLFSKEN +KLH+ LP NPSLAAARS AV WILKVN+HY
Sbjct: 61  DSPNSVFLSDRDFLWEDEELVSLFSKENRNKLHDALPHNPSLAAARSDAVEWILKVNAHY 120

Query: 156 HFTALTAVFAVDYVDRFLSSPHFQTGKPWMTHLTAIACLSLAAKVEETRVPLLLDLQVEE 215
            FTALTAV AVDYVDRFLSSPHFQ  KPWMTHLTAIACLSLAAKVEET VPLLLDLQVEE
Sbjct: 121 SFTALTAVLAVDYVDRFLSSPHFQIDKPWMTHLTAIACLSLAAKVEETEVPLLLDLQVEE 180

Query: 216 NEYYFEAKTIARMEILVLSTLVWRMNPVNPLSFLDYIVRRLGLKDQLCSEFLCRCEQLLL 275
           N Y+FEAKTI RMEILVLSTL+WRMNPVNPLSFLDYIVRRLG KDQLCSEFLC+CE+LLL
Sbjct: 181 NGYFFEAKTIKRMEILVLSTLLWRMNPVNPLSFLDYIVRRLGFKDQLCSEFLCKCERLLL 240

Query: 276 SVILDSRFVCFLPSVIASAIIFQVINDIEPNVAAKYHDQLLGFLRIDKDKVEDCSRFILE 335
           SVILDSRFVCFLPSVIASAIIFQVIND EP+VAAK+HDQLLGFL+IDK+KVEDCS+FI+E
Sbjct: 241 SVILDSRFVCFLPSVIASAIIFQVINDKEPHVAAKFHDQLLGFLQIDKNKVEDCSQFIIE 300

Query: 336 VSSRGRYRNECKNQRRFGVINMSCSSNGWDRNVDSAAVSSPEAATKKRRIDEQCP 389
            S RG       N++RFG+++MSCSSNG  +NVD   VSSPE ATKKR+IDEQ P
Sbjct: 301 ASPRGH-----TNKQRFGLVDMSCSSNGRTQNVD-RVVSSPETATKKRKIDEQPP 349

[Close]

BLAST of Sed0026839 vs. NCBI nr
Match: XP_023536077.1 (cyclin-D3-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 550.1 bits (1416), Expect = 1.6e-152
Identity = 283/355 (79.72%), Postives = 310/355 (87.32%), Query Frame = 0


Query: 36  MRNYRMAKQHCYPISIQHSISGHQKPSFLLDSLYCL--EEGIGDNLIPPKDQAFSVNVNI 95
           MRNYRMAK+HCYP+SI HSISGHQ  S  LDSLYCL  EE IGD    PK +AFS+NVN+
Sbjct: 1   MRNYRMAKRHCYPLSIAHSISGHQNGSLFLDSLYCLEEEEEIGDGHSQPKIEAFSINVNV 60

Query: 96  NSPNSVLLSERDFLWEHEELVSLFSKENEHKLHNTLPLNPSLAAARSKAVNWILKVNSHY 155
           +SPNSV LS+RDFLWE EELVSLFSKEN +KLH+ LP NPSLAAARS AV WILKVN+HY
Sbjct: 61  DSPNSVFLSDRDFLWEDEELVSLFSKENRNKLHDALPHNPSLAAARSDAVEWILKVNAHY 120

Query: 156 HFTALTAVFAVDYVDRFLSSPHFQTGKPWMTHLTAIACLSLAAKVEETRVPLLLDLQVEE 215
            FTALTAV AVDYVDRFLSS HFQ  KPWMTHLTAIACLSLAAKVEET VPLLLDLQVEE
Sbjct: 121 SFTALTAVLAVDYVDRFLSSSHFQIDKPWMTHLTAIACLSLAAKVEETEVPLLLDLQVEE 180

Query: 216 NEYYFEAKTIARMEILVLSTLVWRMNPVNPLSFLDYIVRRLGLKDQLCSEFLCRCEQLLL 275
           N Y+FEAKTI RMEILVLSTL+WRMNPVNPLSFLDYIVRRLG KDQLCSEFLC+CE+LLL
Sbjct: 181 NGYFFEAKTIKRMEILVLSTLLWRMNPVNPLSFLDYIVRRLGFKDQLCSEFLCKCERLLL 240

Query: 276 SVILDSRFVCFLPSVIASAIIFQVINDIEPNVAAKYHDQLLGFLRIDKDKVEDCSRFILE 335
           SVILDSRFVCFLPSVIASAIIFQVIND EP+VAAKY+DQLLGFL+IDK+KVEDCS+FI+E
Sbjct: 241 SVILDSRFVCFLPSVIASAIIFQVINDKEPHVAAKYNDQLLGFLQIDKNKVEDCSQFIIE 300

Query: 336 VSSRGRYRNECKNQRRFGVINMSCSSNGWDRNVDSAAVSSPEAATKKRRIDEQCP 389
            SSRG       N++RFG+++MSCSSNG  +NVD   VSSPE ATKKR+IDEQ P
Sbjct: 301 ASSRGH-----TNKQRFGLVDMSCSSNGRTQNVD-RVVSSPETATKKRKIDEQPP 349

[Close]

BLAST of Sed0026839 vs. NCBI nr
Match: KAG6591401.1 (Cyclin-D3-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 544.7 bits (1402), Expect = 6.6e-151
Identity = 279/350 (79.71%), Postives = 306/350 (87.43%), Query Frame = 0


Query: 41  MAKQHCYPISIQHSISGHQKPSFLLDSLYCL--EEGIGDNLIPPKDQAFSVNVNINSPNS 100
           MAK+HCYP+SI HSISGHQ  S  LDSLYCL  EE IGD    PK +AFS+NVN++SPNS
Sbjct: 1   MAKRHCYPLSIAHSISGHQNGSLFLDSLYCLEEEEEIGDGHSQPKIEAFSINVNVDSPNS 60

Query: 101 VLLSERDFLWEHEELVSLFSKENEHKLHNTLPLNPSLAAARSKAVNWILKVNSHYHFTAL 160
           V LS+RDFLWE EELVSLFSKEN +KLH+ LP NPSLAAARS AV WILKVN+HY FTAL
Sbjct: 61  VFLSDRDFLWEDEELVSLFSKENRNKLHDALPHNPSLAAARSDAVEWILKVNAHYSFTAL 120

Query: 161 TAVFAVDYVDRFLSSPHFQTGKPWMTHLTAIACLSLAAKVEETRVPLLLDLQVEENEYYF 220
           TAV AVDYVDRFLSSPHFQ  KPWMTHLTAIAC+SLAAKVEET VPLLLDLQVEEN Y+F
Sbjct: 121 TAVLAVDYVDRFLSSPHFQIDKPWMTHLTAIACISLAAKVEETEVPLLLDLQVEENGYFF 180

Query: 221 EAKTIARMEILVLSTLVWRMNPVNPLSFLDYIVRRLGLKDQLCSEFLCRCEQLLLSVILD 280
           EAKTI RMEILVLSTL+WRMNPVNPLSFLDYIVRRLG KDQLCSEFLC+CE+LLLSVILD
Sbjct: 181 EAKTIKRMEILVLSTLLWRMNPVNPLSFLDYIVRRLGFKDQLCSEFLCKCERLLLSVILD 240

Query: 281 SRFVCFLPSVIASAIIFQVINDIEPNVAAKYHDQLLGFLRIDKDKVEDCSRFILEVSSRG 340
           SRFVCFLPSVIASAIIFQVIND EP+VAAKYHDQLLGFL+IDK+KVEDCS+FI+E SSRG
Sbjct: 241 SRFVCFLPSVIASAIIFQVINDKEPHVAAKYHDQLLGFLQIDKNKVEDCSQFIIEASSRG 300

Query: 341 RYRNECKNQRRFGVINMSCSSNGWDRNVDSAAVSSPEAATKKRRIDEQCP 389
                  N++RFG+++MSCSSNG  +NVD   VSSPE ATKKR+IDEQ P
Sbjct: 301 H-----TNKQRFGLVDMSCSSNGRTQNVD-RVVSSPETATKKRKIDEQPP 344

[Close]

BLAST of Sed0026839 vs. ExPASy Swiss-Prot
Match: Q9SN11 (Cyclin-D3-3 OS=Arabidopsis thaliana OX=3702 GN=CYCD3-3 PE=2 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 3.0e-69
Identity = 157/346 (45.38%), Postives = 213/346 (61.56%), Query Frame = 0


Query: 49  ISIQHSISGHQKPSFLLDSLYCLEEGIGDNLIPPKDQAFSVNVNINSPNSVLLSERDFLW 108
           ++++        P  +LD L+C EE      +   D++      +N    + LS+ D LW
Sbjct: 1   MALEEEEESQNAPFCVLDGLFCEEESEFHEQVDLCDESVEKFPFLN----LGLSDHDMLW 60

Query: 109 EHEELVSLFSKENEHKLHNTLPLNPSLAAARSKAVNWILKVNSHYHFTALTAVFAVDYVD 168
           + +EL +L SK+ E  L++ +  +  L   R KA++WI KV SHY F +LTA+ AV+Y D
Sbjct: 61  DDDELSTLISKQ-EPCLYDEILDDEFLVLCREKALDWIFKVKSHYGFNSLTALLAVNYFD 120

Query: 169 RFLSSPHFQTGKPWMTHLTAIACLSLAAKVEETRVPLLLDLQVEENEYYFEAKTIARMEI 228
           RF++S  FQT KPWM+ LTA+ACLSLAAKVEE RVP LLD QVEE  Y FEAKTI RME+
Sbjct: 121 RFITSRKFQTDKPWMSQLTALACLSLAAKVEEIRVPFLLDFQVEEARYVFEAKTIQRMEL 180

Query: 229 LVLSTLVWRMNPVNPLSFLDYIVRRLGLKDQLCSEFLCRCEQLLLSVILDSRFVCFLPSV 288
           LVLSTL WRM+PV P+SF D+I+RR   K     EFL RCE LLLS+I DSRF+ F PSV
Sbjct: 181 LVLSTLDWRMHPVTPISFFDHIIRRYSFKSHHQLEFLSRCESLLLSIIPDSRFLSFSPSV 240

Query: 289 IASAIIFQVINDIEPNVAAKYHDQLLGFLRIDKDKVEDCSRFILEVS-SRGRYRNECKNQ 348
           +A+AI+  VI D++    A Y  QL+  L++D +KV  C   +L+ S S+ R  N  +  
Sbjct: 241 LATAIMVSVIRDLKMCDEAVYQSQLMTLLKVDSEKVNKCYELVLDHSPSKKRMMNWMQQP 300

Query: 349 RR-FGVINMSCSSN----GWDRNVDSAAVSSP--EAATKKRRIDEQ 387
               GV + S SS+     W  +  ++  SSP  E   K+RR+ EQ
Sbjct: 301 ASPIGVFDASFSSDSSNESWVVSASASVSSSPSSEPLLKRRRVQEQ 341

[Close]

BLAST of Sed0026839 vs. ExPASy Swiss-Prot
Match: Q9FGQ7 (Cyclin-D3-2 OS=Arabidopsis thaliana OX=3702 GN=CYCD3-2 PE=1 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 1.6e-67
Identity = 150/332 (45.18%), Postives = 213/332 (64.16%), Query Frame = 0


Query: 64  LLDSLYCLEEG--IGDNLIPPKDQAFSVNVNINSPNSVLLSERD-FLWEHEELVSLFSKE 123
           +LD LYC EE   + D+L    D  F    + +      L   D FLW+ +E++SL SKE
Sbjct: 17  VLDGLYCEEETGFVEDDLDDDGDLDFLEKSDESVVKFQFLPLLDMFLWDDDEILSLISKE 76

Query: 124 NE-HKLHNTLPLNPSLAAARSKAVNWILKVNSHYHFTALTAVFAVDYVDRFLSSPHFQTG 183
           NE +       L+  L + R +A++W+L+V SHY FT+LTA+ AV+Y DRF++S   QT 
Sbjct: 77  NETNPCFGEQILDGFLVSCRKEALDWVLRVKSHYGFTSLTAILAVNYFDRFMTSIKLQTD 136

Query: 184 KPWMTHLTAIACLSLAAKVEETRVPLLLDLQVEENEYYFEAKTIARMEILVLSTLVWRMN 243
           KPWM+ L A+A LSLAAKVEE +VPLLLDLQVEE  Y FEAKTI RME+L+LSTL WRM+
Sbjct: 137 KPWMSQLVAVASLSLAAKVEEIQVPLLLDLQVEEARYLFEAKTIQRMELLILSTLQWRMH 196

Query: 244 PVNPLSFLDYIVRRLGLKDQLCSEFLCRCEQLLLSVILDSRFVCFLPSVIASAIIFQVIN 303
           PV P+SF D+I+RR G K     +F  +CE+LL+SVI D+RF+ + PSV+A+AI+  V  
Sbjct: 197 PVTPISFFDHIIRRFGSKWHQQLDFCRKCERLLISVIADTRFMRYFPSVLATAIMILVFE 256

Query: 304 DIEPNVAAKYHDQLLGFLRIDKDKVEDCSRFILEVS-SRGRYRNECKNQRRFGVINMSCS 363
           +++P    +Y  Q+   L+++++KV +C   +LE + S+ R  N        GV++   S
Sbjct: 257 ELKPCDEVEYQSQITTLLKVNQEKVNECYELLLEHNPSKKRMMNLVDQDSPSGVLDFDDS 316

Query: 364 SN-GWDRNVD---SAAVSSPEAATKKRRIDEQ 387
           SN  W+ +     S++ SSPE   K+RR+ EQ
Sbjct: 317 SNSSWNVSTTASVSSSSSSPEPLLKRRRVQEQ 348

[Close]

BLAST of Sed0026839 vs. ExPASy Swiss-Prot
Match: P42753 (Cyclin-D3-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD3-1 PE=1 SV=3)

HSP 1 Score: 257.7 bits (657), Expect = 2.1e-67
Identity = 137/277 (49.46%), Postives = 191/277 (68.95%), Query Frame = 0


Query: 59  QKPSFLLDSLYCLEEGIGDNLIPPKDQAFSVNVNINSPNS-VLLSERDFLWEHEELVSLF 118
           Q  SFLLD+LYC EE   D     + +    N +++S +S  ++ ++D  WE E+LV+LF
Sbjct: 13  QSNSFLLDALYCEEEKWDD-----EGEEVEENSSLSSSSSPFVVLQQDLFWEDEDLVTLF 72

Query: 119 SKENEHKLHNTLPLNPSLAAARSKAVNWILKVNSHYHFTALTAVFAVDYVDRFLSSPHFQ 178
           SKE E  L  +   +  L+  R +AV WIL+VN+HY F+ L AV A+ Y+D+F+ S   Q
Sbjct: 73  SKEEEQGL--SCLDDVYLSTDRKEAVGWILRVNAHYGFSTLAAVLAITYLDKFICSYSLQ 132

Query: 179 TGKPWMTHLTAIACLSLAAKVEETRVPLLLDLQVEENEYYFEAKTIARMEILVLSTLVWR 238
             KPWM  L ++ACLSLAAKVEET+VPLLLD QVEE +Y FEAKTI RME+L+LSTL W+
Sbjct: 133 RDKPWMLQLVSVACLSLAAKVEETQVPLLLDFQVEETKYVFEAKTIQRMELLILSTLEWK 192

Query: 239 MNPVNPLSFLDYIVRRLGLKDQLCSEFLCRCEQLLLSVILDSRFVCFLPSVIASAIIFQV 298
           M+ + P+SF+D+I+RRLGLK+    +FL +C +LLLSVI DSRFV +LPSV+A+A + ++
Sbjct: 193 MHLITPISFVDHIIRRLGLKNNAHWDFLNKCHRLLLSVISDSRFVGYLPSVVAAATMMRI 252

Query: 299 INDIEPNVAAKYHDQLLGFLRIDKDKVEDCSRFILEV 335
           I  ++P     Y   LLG L + K+KV+ C   IL++
Sbjct: 253 IEQVDPFDPLSYQTNLLGVLNLTKEKVKTCYDLILQL 282

[Close]

BLAST of Sed0026839 vs. ExPASy Swiss-Prot
Match: Q6YXH8 (Cyclin-D4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD4-1 PE=2 SV=2)

HSP 1 Score: 154.1 bits (388), Expect = 3.3e-36
Identity = 87/193 (45.08%), Postives = 113/193 (58.55%), Query Frame = 0


Query: 139 RSKAVNWILKVNSHYHFTALTAVFAVDYVDRFLSSPHFQTGKPWMTHLTAIACLSLAAKV 198
           R  A++WI KV+S+Y F  LTA  AV+Y+DRFLS      GK WMT L A+ACLSLAAK+
Sbjct: 103 RMDAIDWIWKVHSYYSFAPLTACLAVNYLDRFLSLYQLPDGKDWMTQLLAVACLSLAAKM 162

Query: 199 EETRVPLLLDLQVEENEYYFEAKTIARMEILVLSTLVWRMNPVNPLSFLDYIVRRLGLKD 258
           EET VP  LDLQV E  Y FEAKTI RME+LVLSTL WRM  V P S++DY +R L   D
Sbjct: 163 EETDVPQSLDLQVGEERYVFEAKTIQRMELLVLSTLKWRMQAVTPFSYVDYFLRELNGGD 222

Query: 259 QLCSEFLCRCEQLLLSVILDSRFVCFLPSVIASAIIFQVINDIEPNVAAKYHDQLLGFLR 318
                      +L+L +   +  + F PS IA+A+            AA   ++   F  
Sbjct: 223 PPSGRSALLSSELILCIARGTECLGFRPSEIAAAV-----------AAAVVGEEHAAFSH 282

Query: 319 IDKDKVEDCSRFI 332
           ++K+++  C   I
Sbjct: 283 VNKERMSHCQEVI 284

[Close]

BLAST of Sed0026839 vs. ExPASy Swiss-Prot
Match: Q4KYM5 (Cyclin-D4-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD4-2 PE=2 SV=2)

HSP 1 Score: 150.2 bits (378), Expect = 4.8e-35
Identity = 81/193 (41.97%), Postives = 118/193 (61.14%), Query Frame = 0


Query: 139 RSKAVNWILKVNSHYHFTALTAVFAVDYVDRFLSSPHFQTGKPWMTHLTAIACLSLAAKV 198
           RS+A+ WI +V ++Y+F+++TA  AV+Y+DRFLS      G+ WMT L ++ACLS+AAK+
Sbjct: 110 RSEAIGWIWEVYTYYNFSSVTAYLAVNYLDRFLSQYELPEGRDWMTQLLSVACLSIAAKM 169

Query: 199 EETRVPLLLDLQVEENEYYFEAKTIARMEILVLSTLVWRMNPVNPLSFLDYIVRRLGLKD 258
           EET VP  LDLQ+ E  + FE +TI RME+LVL+ L WRM  V P S++DY +R+L   +
Sbjct: 170 EETVVPQCLDLQIGEPRFLFEVETIHRMELLVLTNLNWRMQAVTPFSYIDYFLRKLNSGN 229

Query: 259 QLCSEFLCRCEQLLLSVILDSRFVCFLPSVIASAIIFQVINDIEPNVAAKYHDQLLGFLR 318
                +L R  +L+L +   + F+ F PS IA+A+   V  +    V     D    F  
Sbjct: 230 AAPRSWLLRSSELILRIAAGTGFLEFRPSEIAAAVAATVAGEATGVVE---EDIAEAFTH 289

Query: 319 IDKDKVEDCSRFI 332
           +DK +V  C   I
Sbjct: 290 VDKGRVLQCQEAI 299

[Close]

BLAST of Sed0026839 vs. ExPASy TrEMBL
Match: A0A6J1F9D6 (B-like cyclin OS=Cucurbita moschata OX=3662 GN=LOC111443288 PE=3 SV=1)

HSP 1 Score: 555.4 bits (1430), Expect = 1.8e-154
Identity = 284/355 (80.00%), Postives = 311/355 (87.61%), Query Frame = 0


Query: 36  MRNYRMAKQHCYPISIQHSISGHQKPSFLLDSLYCL--EEGIGDNLIPPKDQAFSVNVNI 95
           MRNYRMAK+HCYP+SI HSISGHQ  S  LDSLYCL  EE IGD    PK +AFS+NVN+
Sbjct: 1   MRNYRMAKRHCYPLSIAHSISGHQNGSLFLDSLYCLEEEEEIGDGHSQPKIEAFSINVNV 60

Query: 96  NSPNSVLLSERDFLWEHEELVSLFSKENEHKLHNTLPLNPSLAAARSKAVNWILKVNSHY 155
           +SPNSV LS+RDFLWE EELVSLFSKEN +KLH+ LP NPSLAAARS AV WILKVN+HY
Sbjct: 61  DSPNSVFLSDRDFLWEDEELVSLFSKENRNKLHDALPHNPSLAAARSDAVEWILKVNAHY 120

Query: 156 HFTALTAVFAVDYVDRFLSSPHFQTGKPWMTHLTAIACLSLAAKVEETRVPLLLDLQVEE 215
            FTALTAV AVDYVDRFLSSPHFQ  KPWMTHLTAIACLSLAAKVEET VPLLLDLQVEE
Sbjct: 121 SFTALTAVLAVDYVDRFLSSPHFQIDKPWMTHLTAIACLSLAAKVEETEVPLLLDLQVEE 180

Query: 216 NEYYFEAKTIARMEILVLSTLVWRMNPVNPLSFLDYIVRRLGLKDQLCSEFLCRCEQLLL 275
           N Y+FEAKTI RMEILVLSTL+WRMNPVNPLSFLDYIVRRLG KDQLCSEFLC+CE+LLL
Sbjct: 181 NRYFFEAKTIKRMEILVLSTLLWRMNPVNPLSFLDYIVRRLGFKDQLCSEFLCKCERLLL 240

Query: 276 SVILDSRFVCFLPSVIASAIIFQVINDIEPNVAAKYHDQLLGFLRIDKDKVEDCSRFILE 335
           SVILDSRFVCFLPS+IASAIIFQVIND EP+VAAKYHDQLLGFL+IDK+KVEDCS+FI+E
Sbjct: 241 SVILDSRFVCFLPSMIASAIIFQVINDKEPHVAAKYHDQLLGFLQIDKNKVEDCSQFIIE 300

Query: 336 VSSRGRYRNECKNQRRFGVINMSCSSNGWDRNVDSAAVSSPEAATKKRRIDEQCP 389
            SSRG       N++RFG+++MSCSSNG  +NVD   VSSPE ATKKR+IDEQ P
Sbjct: 301 ASSRGH-----TNKQRFGLVDMSCSSNGRTQNVD-RVVSSPETATKKRKIDEQPP 349

[Close]

BLAST of Sed0026839 vs. ExPASy TrEMBL
Match: A0A6J1INX9 (B-like cyclin OS=Cucurbita maxima OX=3661 GN=LOC111477243 PE=3 SV=1)

HSP 1 Score: 552.7 bits (1423), Expect = 1.2e-153
Identity = 282/355 (79.44%), Postives = 310/355 (87.32%), Query Frame = 0


Query: 36  MRNYRMAKQHCYPISIQHSISGHQKPSFLLDSLYCLEE--GIGDNLIPPKDQAFSVNVNI 95
           MRNYRMAK+HCYP+S+ HSISGHQ  S  LDSLYCLEE  GIGD    PK +AFS+NVN+
Sbjct: 1   MRNYRMAKRHCYPLSVAHSISGHQNVSLFLDSLYCLEEEDGIGDGHSQPKIEAFSINVNV 60

Query: 96  NSPNSVLLSERDFLWEHEELVSLFSKENEHKLHNTLPLNPSLAAARSKAVNWILKVNSHY 155
           +SPNSV LS+RDFLWE EELVSLFSKEN +KLH+ LP NPSLAAARS AV WILKVN+HY
Sbjct: 61  DSPNSVFLSDRDFLWEDEELVSLFSKENRNKLHDALPHNPSLAAARSDAVEWILKVNAHY 120

Query: 156 HFTALTAVFAVDYVDRFLSSPHFQTGKPWMTHLTAIACLSLAAKVEETRVPLLLDLQVEE 215
            FT LTAV AVDYVDRFLSSPHFQ  KPWMTHLTAIACLSLAAKVEET VPLLLDLQVEE
Sbjct: 121 SFTTLTAVLAVDYVDRFLSSPHFQIDKPWMTHLTAIACLSLAAKVEETEVPLLLDLQVEE 180

Query: 216 NEYYFEAKTIARMEILVLSTLVWRMNPVNPLSFLDYIVRRLGLKDQLCSEFLCRCEQLLL 275
           N Y+FEAKTI RMEILVLSTL+WRMNPVNPLSFLDYIVRRLG KDQLCSEFLC+CE+LLL
Sbjct: 181 NGYFFEAKTIKRMEILVLSTLLWRMNPVNPLSFLDYIVRRLGFKDQLCSEFLCKCERLLL 240

Query: 276 SVILDSRFVCFLPSVIASAIIFQVINDIEPNVAAKYHDQLLGFLRIDKDKVEDCSRFILE 335
           SVILDSRFVCFLPS+IASAIIFQVIND EP+VAAKY DQLLGFL+IDK+KVEDCS+FI+E
Sbjct: 241 SVILDSRFVCFLPSLIASAIIFQVINDKEPHVAAKYQDQLLGFLQIDKNKVEDCSQFIIE 300

Query: 336 VSSRGRYRNECKNQRRFGVINMSCSSNGWDRNVDSAAVSSPEAATKKRRIDEQCP 389
            SSRG       N++RFG+++MSCSSNG  +NVD   VSSPE ATKKR+IDEQ P
Sbjct: 301 ASSRGH-----TNKQRFGLVDMSCSSNGRTQNVD-RVVSSPETATKKRKIDEQPP 349

[Close]

BLAST of Sed0026839 vs. ExPASy TrEMBL
Match: A0A6J1FLE4 (B-like cyclin OS=Cucurbita moschata OX=3662 GN=LOC111446475 PE=3 SV=1)

HSP 1 Score: 543.5 bits (1399), Expect = 7.2e-151
Identity = 291/378 (76.98%), Postives = 321/378 (84.92%), Query Frame = 0


Query: 8   LTADYKHKRLPIQKHIFLPNPALTHEKKMRNYRMAKQHCYPISIQH-SISGHQKPSFLLD 67
           ++ADYKH+RLP QKH   P+P  T E +MR+Y MA++HCYPISI H S SGHQ  SFLLD
Sbjct: 1   MSADYKHQRLPNQKH--KPHPNKTCE-EMRHYTMARRHCYPISILHSSSSGHQDASFLLD 60

Query: 68  SLYCLEEGIGDNLIPPKDQAFSVNVNINSPNSVLLSERDFLWEHEELVSLFSKENEHK-L 127
           S +CLEE  GD LI PKDQ F +NV +NSPNSV LSER    E EELVSLFSKEN+++ L
Sbjct: 61  SPFCLEEENGDGLIQPKDQTFLINVCVNSPNSVFLSER----EDEELVSLFSKENKNEFL 120

Query: 128 HNTLPLNPSLAAARSKAVNWILKVNSHYHFTALTAVFAVDYVDRFLSSPHFQTGKPWMTH 187
           HNTL  NPSLAAARSKAV WILKVN+HY FTALTAV AVDYVDRFLSSPHFQ  KPWM H
Sbjct: 121 HNTLSHNPSLAAARSKAVAWILKVNAHYSFTALTAVLAVDYVDRFLSSPHFQIDKPWMAH 180

Query: 188 LTAIACLSLAAKVEETRVPLLLDLQVEENEYYFEAKTIARMEILVLSTLVWRMNPVNPLS 247
           LTAIACLSLAAKVEETRVPLLLDLQVEENEYYFEAKTI +MEILVLSTLVWRMNPVNPLS
Sbjct: 181 LTAIACLSLAAKVEETRVPLLLDLQVEENEYYFEAKTIKKMEILVLSTLVWRMNPVNPLS 240

Query: 248 FLDYIVRRLGLKDQLCSEFLCRCEQLLLSVILDSRFVCFLPSVIASAIIFQVINDIEPNV 307
           FLDYIVRRLG +D+LCSEFLCRCE+LLLSVILDSRFVCFLPSVIASAIIFQVIN+IEPN 
Sbjct: 241 FLDYIVRRLGFRDKLCSEFLCRCERLLLSVILDSRFVCFLPSVIASAIIFQVINNIEPNA 300

Query: 308 AAKYHDQLLGFLRIDKDKVEDCSRFILEVSSRGRYRNECKNQRRFGVINMSCSSNGWDRN 367
           AAK HDQLLG L+IDKDKVEDCSRFI E SS+ R+R +CKN+RRF ++      +G +RN
Sbjct: 301 AAKCHDQLLGILQIDKDKVEDCSRFISEASSKERHRKDCKNKRRFSLM------DGRNRN 360

Query: 368 VDSAAVSSPEAATKKRRI 384
           VD  AVSSPE ATKKR+I
Sbjct: 361 VD-CAVSSPETATKKRKI 364

[Close]

BLAST of Sed0026839 vs. ExPASy TrEMBL
Match: A0A6J1J267 (B-like cyclin OS=Cucurbita maxima OX=3661 GN=LOC111481144 PE=3 SV=1)

HSP 1 Score: 542.3 bits (1396), Expect = 1.6e-150
Identity = 290/377 (76.92%), Postives = 321/377 (85.15%), Query Frame = 0


Query: 8   LTADYKHKRLPIQKHIFLPNPALTHEKKMRNYRMAKQHCYPISIQH-SISGHQKPSFLLD 67
           ++ADYKH+RLP QKH   P+P  T E +MR+Y MA++HCYPISI H S SGHQ  SFLLD
Sbjct: 1   MSADYKHQRLPNQKH--KPHPNKTCE-EMRHYTMARRHCYPISILHSSSSGHQDASFLLD 60

Query: 68  SLYCLEEGIGDNLIPPKDQAFSVNVNINSPNSVLLSERDFLWEHEELVSLFSKENEHK-L 127
           SL+CLEE IGD LI PKDQ F +NV +NSPNSV LSER    E EELVSLFSKEN+++ L
Sbjct: 61  SLFCLEEEIGDGLIQPKDQTFLMNVCVNSPNSVFLSER----EDEELVSLFSKENKNEFL 120

Query: 128 HNTLPLNPSLAAARSKAVNWILKVNSHYHFTALTAVFAVDYVDRFLSSPHFQTGKPWMTH 187
            NTL  NPSLAAARSKAV WILKVN+HY FTALTAV AVDYVDRFLSSPHFQ  KPWM H
Sbjct: 121 RNTLSHNPSLAAARSKAVAWILKVNAHYSFTALTAVLAVDYVDRFLSSPHFQIDKPWMAH 180

Query: 188 LTAIACLSLAAKVEETRVPLLLDLQVEENEYYFEAKTIARMEILVLSTLVWRMNPVNPLS 247
           LTAIACLSLAAKVEETRVPLLLDLQVEENEYYFEAKTI +MEILVLSTLVWRMNPVNP S
Sbjct: 181 LTAIACLSLAAKVEETRVPLLLDLQVEENEYYFEAKTIRKMEILVLSTLVWRMNPVNPHS 240

Query: 248 FLDYIVRRLGLKDQLCSEFLCRCEQLLLSVILDSRFVCFLPSVIASAIIFQVINDIEPNV 307
           FLDYIVRRLG +D+LCSEFLCRCE+LLLSVILDSRFVCFLPSVIASAIIFQVINDIEPN 
Sbjct: 241 FLDYIVRRLGFRDKLCSEFLCRCERLLLSVILDSRFVCFLPSVIASAIIFQVINDIEPNA 300

Query: 308 AAKYHDQLLGFLRIDKDKVEDCSRFILEVSSRGRYRNECKNQRRFGVINMSCSSNGWDRN 367
           AAK HDQLLG L+IDKDKVEDCSRFILE SS+ R+R +CKN+RRF ++      +G +RN
Sbjct: 301 AAKCHDQLLGILQIDKDKVEDCSRFILEASSKERHRKDCKNKRRFSLM------DGQNRN 360

Query: 368 VDSAAVSSPEAATKKRR 383
           VD  AVSSP+ +TKKR+
Sbjct: 361 VD-CAVSSPKTSTKKRK 363

[Close]

BLAST of Sed0026839 vs. ExPASy TrEMBL
Match: A0A6J1C147 (B-like cyclin OS=Momordica charantia OX=3673 GN=LOC111007307 PE=3 SV=1)

HSP 1 Score: 527.3 bits (1357), Expect = 5.3e-146
Identity = 280/354 (79.10%), Postives = 307/354 (86.72%), Query Frame = 0


Query: 36  MRNYRMAKQHCYPISIQHSI-SGHQ-KPSFLLDSLYCLEEGIGDNLIPPKDQAFSV-NVN 95
           MRNYRMAK+HCYPISI HSI SG+Q   S LLDSLYCLEE   +    PK +A SV NVN
Sbjct: 1   MRNYRMAKRHCYPISIAHSISSGYQNSSSILLDSLYCLEEQWEEE---PKHEANSVLNVN 60

Query: 96  INSPNSVLLSERDFLWEHEELVSLFSKENEHKLHNTLPLNPSLAAARSKAVNWILKVNSH 155
           I+SPNSV+LSERDFLWE EELVSLFSKE ++K HNTLP NP LAAAR+KAV+WILKVN+H
Sbjct: 61  IHSPNSVVLSERDFLWEDEELVSLFSKETKNKXHNTLPQNPLLAAARAKAVDWILKVNAH 120

Query: 156 YHFTALTAVFAVDYVDRFLSSPHFQTGKPWMTHLTAIACLSLAAKVEETRVPLLLDLQVE 215
           Y FTALTAV AVDYVDRFLSSPHFQ GKPWMTHLTAIACLSLAAKVEET+VPLLLDLQVE
Sbjct: 121 YSFTALTAVLAVDYVDRFLSSPHFQIGKPWMTHLTAIACLSLAAKVEETQVPLLLDLQVE 180

Query: 216 ENEYYFEAKTIARMEILVLSTLVWRMNPVNPLSFLDYIVRRLGLKDQLCSEFLCRCEQLL 275
           ENEY+FEAKTI RMEILVLSTL+WRMNPVNPLSFLDYIVRRLGLKDQLCSEFLCRCE+LL
Sbjct: 181 ENEYFFEAKTIKRMEILVLSTLLWRMNPVNPLSFLDYIVRRLGLKDQLCSEFLCRCERLL 240

Query: 276 LSVILDSRFVCFLPSVIASAIIFQVINDIEPNVAAKYHDQLLGFLRIDKDKVEDCSRFIL 335
           LSVILDSRFVCFLPSV+ASAI+ +VIND+EP VA KYHDQLLGFL++DKDKVEDCSRFI 
Sbjct: 241 LSVILDSRFVCFLPSVMASAIMLRVINDVEPCVAVKYHDQLLGFLQVDKDKVEDCSRFIT 300

Query: 336 EVSSRGRYRNECKNQRRFGVINMSCSSNGWDRNVDSAAVSSPEAATKKRRIDEQ 387
           E +SRG        +RRFG I+MSC SNG +RNVD     SPEAATKK ++DEQ
Sbjct: 301 E-ASRGHINEFEFKKRRFGSIDMSCVSNGRNRNVD-----SPEAATKKSKVDEQ 345

[Close]

BLAST of Sed0026839 vs. TAIR 10
Match: AT3G50070.1 (CYCLIN D3;3 )

HSP 1 Score: 263.8 bits (673), Expect = 2.1e-70
Identity = 157/346 (45.38%), Postives = 213/346 (61.56%), Query Frame = 0


Query: 49  ISIQHSISGHQKPSFLLDSLYCLEEGIGDNLIPPKDQAFSVNVNINSPNSVLLSERDFLW 108
           ++++        P  +LD L+C EE      +   D++      +N    + LS+ D LW
Sbjct: 1   MALEEEEESQNAPFCVLDGLFCEEESEFHEQVDLCDESVEKFPFLN----LGLSDHDMLW 60

Query: 109 EHEELVSLFSKENEHKLHNTLPLNPSLAAARSKAVNWILKVNSHYHFTALTAVFAVDYVD 168
           + +EL +L SK+ E  L++ +  +  L   R KA++WI KV SHY F +LTA+ AV+Y D
Sbjct: 61  DDDELSTLISKQ-EPCLYDEILDDEFLVLCREKALDWIFKVKSHYGFNSLTALLAVNYFD 120

Query: 169 RFLSSPHFQTGKPWMTHLTAIACLSLAAKVEETRVPLLLDLQVEENEYYFEAKTIARMEI 228
           RF++S  FQT KPWM+ LTA+ACLSLAAKVEE RVP LLD QVEE  Y FEAKTI RME+
Sbjct: 121 RFITSRKFQTDKPWMSQLTALACLSLAAKVEEIRVPFLLDFQVEEARYVFEAKTIQRMEL 180

Query: 229 LVLSTLVWRMNPVNPLSFLDYIVRRLGLKDQLCSEFLCRCEQLLLSVILDSRFVCFLPSV 288
           LVLSTL WRM+PV P+SF D+I+RR   K     EFL RCE LLLS+I DSRF+ F PSV
Sbjct: 181 LVLSTLDWRMHPVTPISFFDHIIRRYSFKSHHQLEFLSRCESLLLSIIPDSRFLSFSPSV 240

Query: 289 IASAIIFQVINDIEPNVAAKYHDQLLGFLRIDKDKVEDCSRFILEVS-SRGRYRNECKNQ 348
           +A+AI+  VI D++    A Y  QL+  L++D +KV  C   +L+ S S+ R  N  +  
Sbjct: 241 LATAIMVSVIRDLKMCDEAVYQSQLMTLLKVDSEKVNKCYELVLDHSPSKKRMMNWMQQP 300

Query: 349 RR-FGVINMSCSSN----GWDRNVDSAAVSSP--EAATKKRRIDEQ 387
               GV + S SS+     W  +  ++  SSP  E   K+RR+ EQ
Sbjct: 301 ASPIGVFDASFSSDSSNESWVVSASASVSSSPSSEPLLKRRRVQEQ 341

[Close]

BLAST of Sed0026839 vs. TAIR 10
Match: AT5G67260.1 (CYCLIN D3;2 )

HSP 1 Score: 258.1 bits (658), Expect = 1.2e-68
Identity = 150/332 (45.18%), Postives = 213/332 (64.16%), Query Frame = 0


Query: 64  LLDSLYCLEEG--IGDNLIPPKDQAFSVNVNINSPNSVLLSERD-FLWEHEELVSLFSKE 123
           +LD LYC EE   + D+L    D  F    + +      L   D FLW+ +E++SL SKE
Sbjct: 17  VLDGLYCEEETGFVEDDLDDDGDLDFLEKSDESVVKFQFLPLLDMFLWDDDEILSLISKE 76

Query: 124 NE-HKLHNTLPLNPSLAAARSKAVNWILKVNSHYHFTALTAVFAVDYVDRFLSSPHFQTG 183
           NE +       L+  L + R +A++W+L+V SHY FT+LTA+ AV+Y DRF++S   QT 
Sbjct: 77  NETNPCFGEQILDGFLVSCRKEALDWVLRVKSHYGFTSLTAILAVNYFDRFMTSIKLQTD 136

Query: 184 KPWMTHLTAIACLSLAAKVEETRVPLLLDLQVEENEYYFEAKTIARMEILVLSTLVWRMN 243
           KPWM+ L A+A LSLAAKVEE +VPLLLDLQVEE  Y FEAKTI RME+L+LSTL WRM+
Sbjct: 137 KPWMSQLVAVASLSLAAKVEEIQVPLLLDLQVEEARYLFEAKTIQRMELLILSTLQWRMH 196

Query: 244 PVNPLSFLDYIVRRLGLKDQLCSEFLCRCEQLLLSVILDSRFVCFLPSVIASAIIFQVIN 303
           PV P+SF D+I+RR G K     +F  +CE+LL+SVI D+RF+ + PSV+A+AI+  V  
Sbjct: 197 PVTPISFFDHIIRRFGSKWHQQLDFCRKCERLLISVIADTRFMRYFPSVLATAIMILVFE 256

Query: 304 DIEPNVAAKYHDQLLGFLRIDKDKVEDCSRFILEVS-SRGRYRNECKNQRRFGVINMSCS 363
           +++P    +Y  Q+   L+++++KV +C   +LE + S+ R  N        GV++   S
Sbjct: 257 ELKPCDEVEYQSQITTLLKVNQEKVNECYELLLEHNPSKKRMMNLVDQDSPSGVLDFDDS 316

Query: 364 SN-GWDRNVD---SAAVSSPEAATKKRRIDEQ 387
           SN  W+ +     S++ SSPE   K+RR+ EQ
Sbjct: 317 SNSSWNVSTTASVSSSSSSPEPLLKRRRVQEQ 348

[Close]

BLAST of Sed0026839 vs. TAIR 10
Match: AT4G34160.1 (CYCLIN D3;1 )

HSP 1 Score: 257.7 bits (657), Expect = 1.5e-68
Identity = 137/277 (49.46%), Postives = 191/277 (68.95%), Query Frame = 0


Query: 59  QKPSFLLDSLYCLEEGIGDNLIPPKDQAFSVNVNINSPNS-VLLSERDFLWEHEELVSLF 118
           Q  SFLLD+LYC EE   D     + +    N +++S +S  ++ ++D  WE E+LV+LF
Sbjct: 13  QSNSFLLDALYCEEEKWDD-----EGEEVEENSSLSSSSSPFVVLQQDLFWEDEDLVTLF 72

Query: 119 SKENEHKLHNTLPLNPSLAAARSKAVNWILKVNSHYHFTALTAVFAVDYVDRFLSSPHFQ 178
           SKE E  L  +   +  L+  R +AV WIL+VN+HY F+ L AV A+ Y+D+F+ S   Q
Sbjct: 73  SKEEEQGL--SCLDDVYLSTDRKEAVGWILRVNAHYGFSTLAAVLAITYLDKFICSYSLQ 132

Query: 179 TGKPWMTHLTAIACLSLAAKVEETRVPLLLDLQVEENEYYFEAKTIARMEILVLSTLVWR 238
             KPWM  L ++ACLSLAAKVEET+VPLLLD QVEE +Y FEAKTI RME+L+LSTL W+
Sbjct: 133 RDKPWMLQLVSVACLSLAAKVEETQVPLLLDFQVEETKYVFEAKTIQRMELLILSTLEWK 192

Query: 239 MNPVNPLSFLDYIVRRLGLKDQLCSEFLCRCEQLLLSVILDSRFVCFLPSVIASAIIFQV 298
           M+ + P+SF+D+I+RRLGLK+    +FL +C +LLLSVI DSRFV +LPSV+A+A + ++
Sbjct: 193 MHLITPISFVDHIIRRLGLKNNAHWDFLNKCHRLLLSVISDSRFVGYLPSVVAAATMMRI 252

Query: 299 INDIEPNVAAKYHDQLLGFLRIDKDKVEDCSRFILEV 335
           I  ++P     Y   LLG L + K+KV+ C   IL++
Sbjct: 253 IEQVDPFDPLSYQTNLLGVLNLTKEKVKTCYDLILQL 282

[Close]

BLAST of Sed0026839 vs. TAIR 10
Match: AT2G22490.1 (Cyclin D2;1 )

HSP 1 Score: 136.7 bits (343), Expect = 3.9e-32
Identity = 84/250 (33.60%), Postives = 135/250 (54.00%), Query Frame = 0


Query: 137 AARSKAVNWILKVNSHYHFTALTAVFAVDYVDRFLSSPHFQTGKPWMTHLTAIACLSLAA 196
           + R++A++WILKV +HYHF  L    +++Y+DRFL+S      K W   L A++CLSLA+
Sbjct: 95  SVRNQALDWILKVCAHYHFGHLCICLSMNYLDRFLTSYELPKDKDWAAQLLAVSCLSLAS 154

Query: 197 KVEETRVPLLLDLQVEENEYYFEAKTIARMEILVLSTLVWRMNPVNPLSFLDYIVRRLGL 256
           K+EET VP ++DLQVE+ ++ FEAKTI RME+LV++TL WR+  + P SF+DY V +  +
Sbjct: 155 KMEETDVPHIVDLQVEDPKFVFEAKTIKRMELLVVTTLNWRLQALTPFSFIDYFVDK--I 214

Query: 257 KDQLCSEFLCRCEQLLLSVILDSRFVCFLPSVIASAIIFQVINDIEPNVAAKYHDQLLGF 316
              +    + R  + +L+      F+ F PS IA+A    V    E     +    L   
Sbjct: 215 SGHVSENLIYRSSRFILNTTKAIEFLDFRPSEIAAAAAVSVSISGETECIDE-EKALSSL 274

Query: 317 LRIDKDKVEDCSRFILEVSSRGRYRNECKNQRR------------FGVINMSC-SSNGWD 374
           + + +++V+ C   +  ++     R    +Q +             GV+  +C S    +
Sbjct: 275 IYVKQERVKRCLNLMRSLTGEENVRGTSLSQEQARVAVRAVPASPVGVLEATCLSYRSEE 334

[Close]

BLAST of Sed0026839 vs. TAIR 10
Match: AT1G70210.1 (CYCLIN D1;1 )

HSP 1 Score: 134.8 bits (338), Expect = 1.5e-31
Identity = 88/250 (35.20%), Postives = 132/250 (52.80%), Query Frame = 0


Query: 136 AAARSKAVNWILKVNSHYHFTALTAVFAVDYVDRFLSSPHFQTGKPWMTHLTAIACLSLA 195
           A+AR  +V WILKV ++Y+F  LTA  AV+Y+DRFL +        W   L A+ACLSLA
Sbjct: 79  ASAREDSVAWILKVQAYYNFQPLTAYLAVNYMDRFLYARRLPETSGWPMQLLAVACLSLA 138

Query: 196 AKVEETRVPLLLDLQVEENEYYFEAKTIARMEILVLSTLVWRMNPVNPLSFLDYIVRRLG 255
           AK+EE  VP L D QV   +Y FEAKTI RME+LVLS L WR+  V P  F+ +   ++ 
Sbjct: 139 AKMEEILVPSLFDFQVAGVKYLFEAKTIKRMELLVLSVLDWRLRSVTPFDFISFFAYKID 198

Query: 256 LKDQLCSEFLCRCEQLLLSVILDSRFVCFLPSVIASAIIFQVINDIE--PNVAAKYHDQL 315
                   F+    +++LS I ++ F+ + PS IA+A I  V N++    +V   +    
Sbjct: 199 PSGTFLGFFISHATEIILSNIKEASFLEYWPSSIAAAAILCVANELPSLSSVVNPHESPE 258

Query: 316 LGFLRIDKDKVEDCSRFILEVSSRGRYRNECKNQRRFGVINMSCSSNGWDRNVDSAAVSS 375
                + K+K+  C R +  ++      N  K   +  V   + S+     +  S + SS
Sbjct: 259 TWCDGLSKEKIVRCYRLMKAMAIENNRLNTPKVIAKLRVSVRASSTLTRPSDESSFSSSS 318

Query: 376 PEAATKKRRI 384
           P    K+R++
Sbjct: 319 P---CKRRKL 325

The following BLAST results are available for this feature:

BLAST of Sed0026839 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022936814.1	3.8e-154	80.00	cyclin-D3-3-like [Cucurbita moschata]	[more]
XP_022977063.1	2.4e-153	79.44	cyclin-D3-1-like [Cucurbita maxima]	[more]
KAG7024278.1	3.2e-153	79.72	Cyclin-D3-1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023536077.1	1.6e-152	79.72	cyclin-D3-1-like [Cucurbita pepo subsp. pepo]	[more]
KAG6591401.1	6.6e-151	79.71	Cyclin-D3-1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Sed0026839 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SN11	3.0e-69	45.38	Cyclin-D3-3 OS=Arabidopsis thaliana OX=3702 GN=CYCD3-3 PE=2 SV=1	[more]
Q9FGQ7	1.6e-67	45.18	Cyclin-D3-2 OS=Arabidopsis thaliana OX=3702 GN=CYCD3-2 PE=1 SV=1	[more]
P42753	2.1e-67	49.46	Cyclin-D3-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD3-1 PE=1 SV=3	[more]
Q6YXH8	3.3e-36	45.08	Cyclin-D4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD4-1 PE=2 SV=2	[more]
Q4KYM5	4.8e-35	41.97	Cyclin-D4-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD4-2 PE=2 SV=2	[more]

BLAST of Sed0026839 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F9D6	1.8e-154	80.00	B-like cyclin OS=Cucurbita moschata OX=3662 GN=LOC111443288 PE=3 SV=1	[more]
A0A6J1INX9	1.2e-153	79.44	B-like cyclin OS=Cucurbita maxima OX=3661 GN=LOC111477243 PE=3 SV=1	[more]
A0A6J1FLE4	7.2e-151	76.98	B-like cyclin OS=Cucurbita moschata OX=3662 GN=LOC111446475 PE=3 SV=1	[more]
A0A6J1J267	1.6e-150	76.92	B-like cyclin OS=Cucurbita maxima OX=3661 GN=LOC111481144 PE=3 SV=1	[more]
A0A6J1C147	5.3e-146	79.10	B-like cyclin OS=Momordica charantia OX=3673 GN=LOC111007307 PE=3 SV=1	[more]

BLAST of Sed0026839 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G50070.1	2.1e-70	45.38	CYCLIN D3;3	[more]
AT5G67260.1	1.2e-68	45.18	CYCLIN D3;2	[more]
AT4G34160.1	1.5e-68	49.46	CYCLIN D3;1	[more]
AT2G22490.1	3.9e-32	33.60	Cyclin D2;1	[more]
AT1G70210.1	1.5e-31	35.20	CYCLIN D1;1	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013763	Cyclin-like	SMART	SM00385	cyclin_7	coord: 144..232 e-value: 3.9E-12 score: 56.3
IPR013763	Cyclin-like	CDD	cd00043	CYCLIN	coord: 139..231 e-value: 1.46922E-11 score: 57.6336
IPR006671	Cyclin, N-terminal	PFAM	PF00134	Cyclin_N	coord: 133..239 e-value: 2.0E-24 score: 85.7
IPR006671	Cyclin, N-terminal	PROSITE	PS00292	CYCLINS	coord: 139..170
None	No IPR available	GENE3D	1.10.472.10		coord: 240..272 e-value: 1.5E-32 score: 114.7
None	No IPR available	GENE3D	1.10.472.10		coord: 137..239 e-value: 1.5E-32 score: 114.7
None	No IPR available	PANTHER	PTHR10177:SF427	CYCLIN D3.1 PROTEIN	coord: 87..276
IPR039361	Cyclin	PANTHER	PTHR10177	CYCLINS	coord: 87..276
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 108..239

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0026839.1	Sed0026839.1	mRNA
Sed0026839.2	Sed0026839.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051301	cell division
biological_process	GO:0044772	mitotic cell cycle phase transition
biological_process	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity
cellular_component	GO:0000307	cyclin-dependent protein kinase holoenzyme complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity