
Sed0026819 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTTTTGGCAAGTCTTCTCAATCGCGGCTGAATTTCCCGAGAACCAAACAGGTTTGCGATCTTATTGTTTGGGGTTCTTTTGTTCATGTTTCCTTTGGCGATATCAATGTCATGTATGTTATTTGGCTTTTTGGATTTTATAATTGATTCCAAGTGTATGAACTAGGGTTTTGCTGGCCGACCAATGAATTCAGTTTCTTTTTTCTCACTCTTTCCATGATGTTCTTAATAAATTCTACCTCCTCACTTCATTTTAGTGGCGTATGTGGTTCGGGTTGAGTTAAGTTAGGAGACGTTTTTGGAACCCATTAAATTTCGAGGTTGGCCAATTCGTAATACCCAACCCAACATTTTTTATTTTGCGTTGGGTTGTCGGATTGTGTCAATCTCCTATTTTTTTCCCTAAAATTTTTTGGAACAAACTAAATTTTGAGGTTGGTCAATTCGTAAAACCCAACCCAACATTTTTTTTATTTCGAGTTGGGTTGTCGGATTGTGTCAATTTCCTATTTCTTCTCTAAAACTTGAGTCATAGTCCATAATTATGCAAATCAAATAAAGAAAAAAAATACATGATCGTATTTTGATACTAGATTACATCTTTTATTAATATATGATCTTTACTAATATGCTAAGAAGCTGTATTGTTAATTAAAATTTTACATATACATATACATATATTATTTTTAGTTCGGGTTGGGTTAGGTTGAAAGAGTTTCAACCAAGAATCAATCCAACCGAATGGAAATTATCAAATCCCAACCCAACTTAACCCTTATGATTTGAGTTGGATAATCTAGCTGTTTGTGTTGTCGGTTATTTTATACACTCTTACTTCATTTAGCCACTGGGGGGATTTCATGCTATTTCTTCTTCATATATATATATATGTGTGTGTATATATATATATATATATATATTAACCTTTTTAAGATGGTTCCGTTCAAATTGCAGCTTGTGAAGTGTAGCTGATTGTCTTAAAATGTTCAAAAATACGTTCCAGTCCGGATTCCTTTCTATATTATACAGTCTTGGGTATGTTTAAATGTTTGAATGCCAGTACTTTAATTTGTTGAAGTTGGTGTTTTTTCAATTACAGGGACTAAAGATTTGTTTTATTCGTTTTTGTCCTCGTAGGAGCAAACCCCTTCAGATATGGGATAAAGAAGGTAAGATTGTTCATCTGCGGATTGATGTTTTTGTTTGCATTTGGATATAGATTTTTTTTTTTTATTTTTTTTTATTTTGTCTATTTGGTATTTGAGAACATGGTATGGTGTTCTTTAATGGTCTGAAGAAGAAAAGAAAGCATAGTTGCTCATAATACTGTCCCAATTTAGTTGTGTAGCTAAGCTCAGATTTCCCTGTTTCAAATAAACAAAAAAGTAGTGTCTCCAAGGGGTGGCGCAGTGGTTGAAGACTTGGGCTTTGAGGGTATACTCCCCTCAAGGTCCCGAGTTCGACTCTTCCCTGTGACTATTCTCCTTCGATGTCTCCGGTGTCTGGCCTATGGACGGGGGTGGTTACCTTGTTTCAAAAAAAAAAAAAAGTAGTTGTGTAGCTAACACGAGCATAGTTCAGCCGGATGCATCTATCGATGGTCAGAGGTTCAAAAATTCCCACCCTTCCTTTGTTTTCATAAAAAACTAGTCAGTGTTTGCTCAGGTGGAGATGCTAAATAATCCAAATGCTATGTGGGAATTGGTTTATTTTATCTTTGAGGTTGTTTGTTCAAATAAAGTGCACAACTTGCATCAATAAGAAGCTTTTCTCCCATTGTTCAGCATAGCTTTTCCCCTATGCTCTCTTCTTGGTGTCTTGATTTTGTTTTTGTTTTTGTTTTTGTTTGATTTCTCCATGTATCTGCCCTCTAATTGACCATTGTACTTGGTTATTTTTTCTCACTTATTACTGTTCCGATAGGTTATCTTTACACTTTCACTGATCAATGAAAATGTTTTTGTTCCATATCAAAAAGTGTTGAAATGTAAAGGTGTTATGTTTTGGAAATGTAAACCATTGTAGCAGAGAACATGTTACTGATCTCAACTTTTGACCTAAATTTTTAAATGATGGGCGATGGAGAATATTACTTGAGTTGTCTATCTAGGACTTCTATTCCATAATTTTGAAATTTCGGCATCATATACCCCTCAATTTTTAATAGGAACTTGGAACCTCCCTCCCTCTCTAGAGAATACGCCAAAATGGCCTAATCCTAAACATTGGATAACCTCCACTACCTAGACTCTCTATTTATAACCCAAAATACCTAACAAATCGTATCTAATTATTAAGCCCGTTTGATAACCATTTTATTTTTTGTTTATGAAATTTAAGCTTATTTCTACTCAAATTTCTTATCATGTGTTCCATCTTTCCTACAATGTATTCATATTTCTTTAAGAAAGTAGGTGAATACTAACCAAATTTAAAAAACAAAAAACAAGCTTTTGGAAGCTACTTTTTTTAGTTTCCAAATTTTGGTTTTGCTTATTAAAATATAGGTAAGATGTAGATATTCAAATAAGGAAAAATGTATAGTAAGGTAGTTGTTGTAGGCTTAAATTTCATAAACAAAAAATGAAAAACAAAATGGTTATCAAACAAAGCCTAAAATACCCATATCGTAAATTCTATCATAATCTTGCTCTTTTTTCTTTTTTGGCAGTTTCTAATGGTCACGTCAAACGGCCTCAGGATGAAGACATCCAATCAAACGTCCTTGAAATTGTTGGATCCAACATTCAGTCTACCTATATAACATGCCCAGCTGACTCTGCTGCTACACTGGGTATAAAATTGCCATTCTTGGTTGTAATCGTGAAGAATCTCAAGAAATATTTTACTTTTGAGATTCAAGTTCTCGACGATAAGAATGTCAGAAGACGTTTCCGAGCTTCTAACTTTCAAGTGTGTAAGTCTGCCTTTTTATAGATGTTGTTACTGAAGCTCTTTCTTTCTTCTGCACACTCATGCACGAATACTACCCCCCCTTGGAAGATAACAGCTATTTGGTTATTGAAGGACTTTAGTTACTATTGCATTGCATCTATATATATGGGTGATATTGTTTACATTGGCATTTTGCTGATCAATATAGGAGTCTATCGCCAACAAGTGCAACGCTCTGGTGGCATGATTTATAACCTAGTAACCCTTAAGCAAGAGGTTACGGGTTGAAATCCGACATCCCATAATGTATGAAATGAAAAAAGATATAGGAGTCTGTATCCTTGATCTCAGACTATGCTTTGGCCAATGTGATTAACTTGTTAATTCTATGAGACATGAGTATGATGTAAAGTGATGATAATGTAACGTCTCTTCTATTGTGTAGGCTATCACTAGAGTTAAGCCATATATCTGCACCATGCCTCTAAAGATGGATGAAGGCTGGAACCACATTCAGCTGAATCTGGCTGATTTTACTCGGAGGGCGTATGGCACAAACTATGTCGAGACATTGCGAGTTCAGGTGCATGCAAACTGCCGCTTGAGGAGGATTTACTTTGCAGACCGCTTGTATTCAGAGGATGAGCTTCCGCCGGAGTTTAAGTTGTACCTCCCTTCACAGGTGAAGTTTCCATCCATGCCAGCCAGCACTTCTCTTTTTAAGGAAATATATATTAATTTCAAGAAAATACTCAATTTAACTGAAAGATATGCCAATTTTTTTCATGAGCTCGCTAATTTCAATAGTTATCGAGTTTTGCATTAAACTAGTTTGATCGATGCACAAATTTTAGCTTGAATAATGCATCTATTAACCATCAAATAATTTTGCTAAAACTCACCATTTTCAACAGCAGTTTAGCTTTAATGTTGTTTTTCTCTTTAATCACATGTTTTATAATCATTTGAGAATGTTTTCCTTCATTTTATCCTCTCTTGTCATTATTTTCTTGCAGAGAGCATGAGAAGGCTTCTAGTGTAGCAAGCATCATTGCTAGAAATTGTTACACCAATCCCTATTACTAGAAGACATTCCCTTCTCCAACACCCGAATGATCATCGAGCGTTGTTTTTATCTGAATTTCTCGTGAACTCATGGACGACTCCGATTGCTCCGTTTGATACGATAATGTAAAACCGAACAGGACTAATTAGCTCTTATATTCATGAGCTCGTTGCTGTTCTTGCGGCTGGACAATGAGATTTAGCTTTAAATTCAATGGTCGCCAGATCTTTAGACGATGTTGTTGAGACTCGGGTCGTTTGAATCTGAAGAGTTTGGTTCATTTGATGATTAAGGCCCCATTTGATAATCATTTTATTTTTTGTTTATGAAATTTAAGCGAAATTTAAGCCTACAA ATGCTTTTTGGCAAGTCTTCTCAATCGCGGCTGAATTTCCCGAGAACCAAACAGGTTTGCGATCTTATTGTTTGGGGTTCTTTTGTTCATGTTTCCTTTGGCGATATCAATGTCATTGTAGCTGATTGTCTTAAAATGTTCAAAAATACGTTCCAGTCCGGATTCCTTTCTATATTATACAGTCTTGGGAGCAAACCCCTTCAGATATGGGATAAAGAAGTTTCTAATGGTCACGTCAAACGGCCTCAGGATGAAGACATCCAATCAAACGTCCTTGAAATTGTTGGATCCAACATTCAGTCTACCTATATAACATGCCCAGCTGACTCTGCTGCTACACTGGGTATAAAATTGCCATTCTTGGTTGTAATCGTGAAGAATCTCAAGAAATATTTTACTTTTGAGATTCAAGTTCTCGACGATAAGAATGTCAGAAGACGTTTCCGAGCTTCTAACTTTCAAGTGTGTAATTACTATTGCATTGCATCTATATATATGGGTGATATTGTTTACATTGGCATTTTGCTGATCAATATAGGAGCTATCACTAGAGTTAAGCCATATATCTGCACCATGCCTCTAAAGATGGATGAAGGCTGGAACCACATTCAGCTGAATCTGGCTGATTTTACTCGGAGGGCGTATGGCACAAACTATGTCGAGACATTGCGAGTTCAGGTGCATGCAAACTGCCGCTTGAGGAGGATTTACTTTGCAGACCGCTTGTATTCAGAGGATGAGCTTCCGCCGGAGTTTAAGTTGTACCTCCCTTCACAGGTGAAGTTTCCATCCATGCCAGCCAGCACTTCTCTTTTTAAGGAAATATATATTAATTTCAAGAAAATACTCAATTTAACTGAAAGATATGCCAATTTTTTTCATGAGCTCGCTAATTTCAATAGTTATCGAGTTTTGCATTAAACTAGTTTGATCGATGCACAAATTTTAGCTTGAATAATGCATCTATTAACCATCAAATAATTTTGCTAAAACTCACCATTTTCAACAGCAGTTTAGCTTTAATGTTGTTTTTCTCTTTAATCACATGTTTTATAATCATTTGAGAATGTTTTCCTTCATTTTATCCTCTCTTGTCATTATTTTCTTGCAGAGAGCATGAGAAGGCTTCTAGTGTAGCAAGCATCATTGCTAGAAATTGTTACACCAATCCCTATTACTAGAAGACATTCCCTTCTCCAACACCCGAATGATCATCGAGCGTTGTTTTTATCTGAATTTCTCGTGAACTCATGGACGACTCCGATTGCTCCGTTTGATACGATAATGTAAAACCGAACAGGACTAATTAGCTCTTATATTCATGAGCTCGTTGCTGTTCTTGCGGCTGGACAATGAGATTTAGCTTTAAATTCAATGGTCGCCAGATCTTTAGACGATGTTGTTGAGACTCGGGTCGTTTGAATCTGAAGAGTTTGGTTCATTTGATGATTAAGGCCCCATTTGATAATCATTTTATTTTTTGTTTATGAAATTTAAGCGAAATTTAAGCCTACAA ATGCTTTTTGGCAAGTCTTCTCAATCGCGGCTGAATTTCCCGAGAACCAAACAGGTTTGCGATCTTATTGTTTGGGGTTCTTTTGTTCATGTTTCCTTTGGCGATATCAATGTCATTGTAGCTGATTGTCTTAAAATGTTCAAAAATACGTTCCAGTCCGGATTCCTTTCTATATTATACAGTCTTGGGAGCAAACCCCTTCAGATATGGGATAAAGAAGTTTCTAATGGTCACGTCAAACGGCCTCAGGATGAAGACATCCAATCAAACGTCCTTGAAATTGTTGGATCCAACATTCAGTCTACCTATATAACATGCCCAGCTGACTCTGCTGCTACACTGGGTATAAAATTGCCATTCTTGGTTGTAATCGTGAAGAATCTCAAGAAATATTTTACTTTTGAGATTCAAGTTCTCGACGATAAGAATGTCAGAAGACGTTTCCGAGCTTCTAACTTTCAAGTGTGTAATTACTATTGCATTGCATCTATATATATGGGTGATATTGTTTACATTGGCATTTTGCTGATCAATATAGGAGCTATCACTAGAGTTAAGCCATATATCTGCACCATGCCTCTAAAGATGGATGAAGGCTGGAACCACATTCAGCTGAATCTGGCTGATTTTACTCGGAGGGCGTATGGCACAAACTATGTCGAGACATTGCGAGTTCAGGTGCATGCAAACTGCCGCTTGAGGAGGATTTACTTTGCAGACCGCTTGTATTCAGAGGATGAGCTTCCGCCGGAGTTTAAGTTGTACCTCCCTTCACAGGTGAAGTTTCCATCCATGCCAGCCAGCACTTCTCTTTTTAAGGAAATATATATTAATTTCAAGAAAATACTCAATTTAACTGAAAGATATGCCAATTTTTTTCATGAGCTCGCTAATTTCAATAGTTATCGAGTTTTGCATTAA MLFGKSSQSRLNFPRTKQVCDLIVWGSFVHVSFGDINVIVADCLKMFKNTFQSGFLSILYSLGSKPLQIWDKEVSNGHVKRPQDEDIQSNVLEIVGSNIQSTYITCPADSAATLGIKLPFLVVIVKNLKKYFTFEIQVLDDKNVRRRFRASNFQVCNYYCIASIYMGDIVYIGILLINIGAITRVKPYICTMPLKMDEGWNHIQLNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFADRLYSEDELPPEFKLYLPSQVKFPSMPASTSLFKEIYINFKKILNLTERYANFFHELANFNSYRVLH Homology
BLAST of Sed0026819 vs. NCBI nr
Match: KAG7012862.1 (Cilia- and flagella-associated protein 20 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 378.3 bits (970), Expect = 6.5e-101 Identity = 192/226 (84.96%), Postives = 201/226 (88.94%), Query Frame = 0
BLAST of Sed0026819 vs. NCBI nr
Match: XP_038892068.1 (cilia- and flagella-associated protein 20 isoform X1 [Benincasa hispida]) HSP 1 Score: 372.9 bits (956), Expect = 2.7e-99 Identity = 186/221 (84.16%), Postives = 192/221 (86.88%), Query Frame = 0
BLAST of Sed0026819 vs. NCBI nr
Match: KAG5539254.1 (hypothetical protein RHGRI_019717 [Rhododendron griersonianum]) HSP 1 Score: 363.2 bits (931), Expect = 2.2e-96 Identity = 182/218 (83.49%), Postives = 196/218 (89.91%), Query Frame = 0
BLAST of Sed0026819 vs. NCBI nr
Match: XP_022139283.1 (cilia- and flagella-associated protein 20 isoform X2 [Momordica charantia]) HSP 1 Score: 360.5 bits (924), Expect = 1.4e-95 Identity = 181/214 (84.58%), Postives = 186/214 (86.92%), Query Frame = 0
BLAST of Sed0026819 vs. NCBI nr
Match: XP_038892069.1 (cilia- and flagella-associated protein 20 isoform X2 [Benincasa hispida]) HSP 1 Score: 360.5 bits (924), Expect = 1.4e-95 Identity = 180/214 (84.11%), Postives = 186/214 (86.92%), Query Frame = 0
BLAST of Sed0026819 vs. ExPASy Swiss-Prot
Match: Q9VKV8 (Cilia- and flagella-associated protein 20 OS=Drosophila melanogaster OX=7227 GN=Bug22 PE=2 SV=1) HSP 1 Score: 316.6 bits (810), Expect = 3.0e-85 Identity = 151/214 (70.56%), Postives = 175/214 (81.78%), Query Frame = 0
BLAST of Sed0026819 vs. ExPASy Swiss-Prot
Match: Q6B857 (Cilia- and flagella-associated protein 20 OS=Bos taurus OX=9913 GN=CFAP20 PE=2 SV=1) HSP 1 Score: 315.1 bits (806), Expect = 8.8e-85 Identity = 152/216 (70.37%), Postives = 174/216 (80.56%), Query Frame = 0
BLAST of Sed0026819 vs. ExPASy Swiss-Prot
Match: Q8BTU1 (Cilia- and flagella-associated protein 20 OS=Mus musculus OX=10090 GN=Cfap20 PE=1 SV=1) HSP 1 Score: 315.1 bits (806), Expect = 8.8e-85 Identity = 152/216 (70.37%), Postives = 174/216 (80.56%), Query Frame = 0
BLAST of Sed0026819 vs. ExPASy Swiss-Prot
Match: Q5ZHP3 (Cilia- and flagella-associated protein 20 OS=Gallus gallus OX=9031 GN=CFAP20 PE=2 SV=1) HSP 1 Score: 314.7 bits (805), Expect = 1.2e-84 Identity = 151/216 (69.91%), Postives = 174/216 (80.56%), Query Frame = 0
BLAST of Sed0026819 vs. ExPASy Swiss-Prot
Match: Q6PBJ2 (Cilia- and flagella-associated protein 20 OS=Danio rerio OX=7955 GN=cfap20 PE=2 SV=1) HSP 1 Score: 314.7 bits (805), Expect = 1.2e-84 Identity = 151/216 (69.91%), Postives = 174/216 (80.56%), Query Frame = 0
BLAST of Sed0026819 vs. ExPASy TrEMBL
Match: A0A6J1CFC1 (cilia- and flagella-associated protein 20 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111010238 PE=4 SV=1) HSP 1 Score: 360.5 bits (924), Expect = 6.8e-96 Identity = 181/214 (84.58%), Postives = 186/214 (86.92%), Query Frame = 0
BLAST of Sed0026819 vs. ExPASy TrEMBL
Match: A0A2H5Q1U4 (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_188390 PE=4 SV=1) HSP 1 Score: 357.8 bits (917), Expect = 4.4e-95 Identity = 179/218 (82.11%), Postives = 193/218 (88.53%), Query Frame = 0
BLAST of Sed0026819 vs. ExPASy TrEMBL
Match: A0A6J1FZ95 (cilia- and flagella-associated protein 20 OS=Cucurbita moschata OX=3662 GN=LOC111449249 PE=4 SV=1) HSP 1 Score: 356.7 bits (914), Expect = 9.8e-95 Identity = 178/214 (83.18%), Postives = 185/214 (86.45%), Query Frame = 0
BLAST of Sed0026819 vs. ExPASy TrEMBL
Match: A0A5N5NF10 (DUF667 domain-containing protein OS=Salix brachista OX=2182728 GN=DKX38_005080 PE=4 SV=1) HSP 1 Score: 356.3 bits (913), Expect = 1.3e-94 Identity = 185/229 (80.79%), Postives = 196/229 (85.59%), Query Frame = 0
BLAST of Sed0026819 vs. ExPASy TrEMBL
Match: A0A6J1CDI8 (cilia- and flagella-associated protein 20 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010238 PE=4 SV=1) HSP 1 Score: 355.9 bits (912), Expect = 1.7e-94 Identity = 181/215 (84.19%), Postives = 186/215 (86.51%), Query Frame = 0
BLAST of Sed0026819 vs. TAIR 10
Match: AT3G12300.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF667 (InterPro:IPR007714); Has 373 Blast hits to 371 proteins in 116 species: Archae - 0; Bacteria - 0; Metazoa - 213; Fungi - 4; Plants - 71; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). ) HSP 1 Score: 336.7 bits (862), Expect = 2.0e-92 Identity = 167/214 (78.04%), Postives = 180/214 (84.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
|