Sed0026794 (gene) Chayote v1

Overview
NameSed0026794
Typegene
OrganismSechium edule (Chayote v1)
DescriptionBasic leucine-zipper 70
LocationLG08: 1877115 .. 1880929 (-)
RNA-Seq ExpressionSed0026794
SyntenySed0026794
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGTCGTCAGCATCAGCTCCGGCGTCTCCTCTGTCGGTGTCTCAGTTGCAGAATTCTGCAACTCAACCTTCCCCTCGCGAACACTTGGTACGTTTTCTTATTTCTTTCAAACTCTCTCCCTGTTTTTTTTGGTTCTTGTGTTGATTCTTGTTGCCTTTCAATGGCTTCAAAGACCGATGCTGCAACCAATAATGATGGATTTAGTAATGCGGAGGAGAAGAAACCTGATTTGTTGGATCAATCTGGTTATGGCCTTTTCTTTTTCGCTCTCTCTTTGTTTGATTTGAAGTTTCCTTGTGATCGGGTGTGTTTTTTTTTTTTTTGTAGAAAAGAGTGGAGTGGAAGATAATGAAGTGGTTAATAATAGTTAGGAGTGGTTAACTACTCATTTGGAGATTAAAGTTAATAATAGTGAAATAATCAAGTACTTGTTTAGAGATTGATGTTAATAGTGGTTGAATGATAAATTTGATATTAAAGTTTAGTAAAATTTAATGTTAGATTTGATAAAGGGGTTGAAGAGGAGGTGAAGAGTACTTAACGGTAATTGTTTACTATAAAAAACAAACAAGGGGTTTAAACCACTCCTCATGTCCAGAAAACAGACACACCGATGTTTATCTTCTGATTTGTATGGATATTTGATTGGGGGAATTTATAAAGTCCCGTTTGATAACCATTTTGTTTTTCATTTTTTGTTTATGAAATTAAGCCTACAACAACTACGTTACTATAGTTTTTTCCTTATTTAGATATTTACATCTTACCTATATTTTAATAAACAAAACCAAAATTTGTAAACAAAAAAAAGTAGCTTCCAAAAACTTGTTTATGTTTTTGAAATTTGGTTTAGTATGCACCTACTTTCTTAAGGAAAGATGAATACATTGTAGGAAAGATGGAGCACATAGTAAAAAATTTGAATAAAAATAGGCTTAAATTTCATAAACAAGAAACAAAAAACAAAATAGTTATCAAACGGGGCCTAAATTATTCACGTTTCTGTCTTCTAGTTATCAATGTGAATTGAAGTATTTGGGTACTCTATTTTTTTTTTTTGGGAATGAAGAAGATGAAACAAGTTCGTCATATAAAAAGTTTCAGACTTTGAATTATTTGTCTAAAGATCAATTTTTCTAATCAATAATATGGAAAAAGAGATGTATTAGAAGAGATAAAGAAAACCCTAGTTCGTTTCTTGGGTTATCTTAAGTTTAATTCATAATTTTTGTGGATGTATATCATCCATGAACGAATTATTTGTATATTGGGCTTAAAGAACTCTTGTTTTCTTGCTTCCATTTATCTGTATATTGGACCCTTTGACTACTAGAACAAATAGTTCTCGTTCAGATAATGATAGTGGCTCAACGTTGTGCTATGTTCCTTATTCTTACCAGAGATTTTGACCATTTTAATTCCGTTGAGAAGTACAAGAAATATGAGGCTGACTACGCTCAACGCCTAATTGCCAAATACTATTCAAAGAGAAATCTCTATGGAGGTAGGTTTAATTGCTATATAACTTTTGTACCCAAGGGGTGGCACAGTGGTTGAAGACTTGGGCTTTGAAGGTATGCTCCCTTCAAAGTCCCAGATTCCAGACTCAGCTGTGACATTACTCCTTCGATGTCTCTCGGTGCCTGACCTAGGGGCTGGCGTGGTTACTCTTGTTTCAAAAAAAAATTGTTATATAACTTTCATTTCATCTGAAATGTTTAAACAAAATTTGTTAATTATTGGTTATTCATTTGTTAATTTAGTTTAATTTCTATTTCCCTCTCCTCTGTTTTCCAGTTAACTCTTCTCATACAATATCATAACCCCTAAATTTTAGTACCAATTATCACCTTTTTATATTGTATCTGTGTGAGCTCTAGACCAGATTAGTCTGATACAGTGTTACTCATGTTTAACCATTAGGGTGTAATCAGATTAAAATAAGATCATTTTAGAAATGTGTTTGTGTTGTTGAAAAAAAAACTAGCTAGTGACACTCTAGAGATTACAGTTTGTTTCTGGTTTTCTTTTTCAATATCAGTGGCCTAAGTAGTTAATTCATTTAGAGAAATAACCATTAGTCTGGAATAACTACTCATTAAACAAACCATCATACGCCGGCCTATGGTCATAAGGGCCTTGGGAAACCAAAAGGTTATGGGTTCACTATCGACAGATTTCTTCGACAATCAAATATTGTACCGTCAGGGAATTTGTCCCGTTAAAATAGTCAAGAGTAGAACCGTGTTGTACCAGACATGATCTCGATCTTTTGAAGAATGCGTAAGCTGGTTCGGACACCGGTGAATTATTTTTATTTAAAACTCATTAAACCATAGACTTCGAGACTTTGAGACTGAGTACAAATACTCAGGGGGCATGTTTTCTCATAGAAACATCTACCATTTTTGCAGGAAACGGCAACGAGATTATGAAGTCGAGTAAGAATATTTGAACTCTTGCAACTTGATAACCTTTTAGTTTGGACTCAAAATAAATAAATAAATAAATAACTTTTTAGTTATTATCGGAGGTTTAAGGAATTTTTCTTTAATCTGTCCCCAAAATAATCTCTTTGAAGGTGGATTCTTCGTTCAATTCCATGATCCTGGAAGTTCAATTCCATGATCCTGAAAATTGGTATTTAACTTTCATCTTATTTGAAAGTTGTAATACAGGTTTGTGGTCCTCTTCTCAATTTGAACTAAAAAAATCATTTAAATCATTAAAAAAAACTTTAAAAATAATTAAATTTCTATAAAATACTAAATATAGAATAATTTGATGTATGGACCCAATTAGATGAAGATATTGCTATTGCTAACCATATGTGAACATCCTTGTTTAGGGACTAAACAGTCATAATAGATTAGACTTAGACTTAAGGAACCGAATAGATTTTTCTTTAGTACAAAAAGATTTGAATTTATAACCTTTTTATTTTTAAATGTACATTAATATTATTAAGTTATTGTTCTTATTGATGGACGGAATAGACTTCTAAACCGAGTAGAAGAATTTGTTATGCAATAATTAAATATTTTATTTTTTGGACCAATGGCGTGGGGAAGAATTTGAATCAATTACTCGAGTTGACCAATAATAACCAAATATGTAATTTAAATAATAATAATAATAACCAAATATGTCAGCTACATACATTTAATCGACATTAATACATACATTTAATCGACATTAATAAATAAATAAACTCCTTCGTCGGTTCTTCGTCTAAAAATAAATAATAATAATAATAATAAAAATTCATTCCTTATGTTTATAATTTGAATATTGATTATTTTTAATTAGGCAATTGAAAACGGCAAAGTGGACAAGTATTTTTTATCTCCAACCATTGCATAATGCATTGTGCATGATACCAATGGTTGCAAGGCAATTGCTTTGCTTCTTCCACAACTTTAATTCCATTCATGCAAACACTACAAAAATGTGTGGCATCATTTTTATCTTCTTCTTCATCTTTTTCTTCGGTCAAAATCGATGTCGGAAGGTTCTGGAGTACCGTTGTTAATGGAGGAGTTTCGTCGAAGTACGATGGCATGGAATAGCTGAAAACCATTGAATCAAAACCGCCCATGGACAATGGTGCGACGTCCACGGACGATGGCTCGATATCGTGCATGAACAATCGCTCGAAATAGGGAAACAGTTGCTCGAAATCGGTTAACAATTGATCATAGTCATGTTCTTGATAATCGAAGCCTGGATAATCTAAACCAGCCAAATCGATTTCGACCGGAAGCTCGGGCTGCAAAGATTCGGTTTCGTCGAAAAATTCAGCGTTGTATTGA

mRNA sequence

ATGCCGTCGTCAGCATCAGCTCCGGCGTCTCCTCTGTCGGTGTCTCAGTTGCAGAATTCTGCAACTCAACCTTCCCCTCGCGAACACTTGACCGATGCTGCAACCAATAATGATGGATTTAGTAATGCGGAGGAGAAGAAACCTGATTTGTTGGATCAATCTGATTTTGACCATTTTAATTCCGTTGAGAAGTACAAGAAATATGAGGCTGACTACGCTCAACGCCTAATTGCCAAATACTATTCAAAGAGAAATCTCTATGGAGGCAATTGCTTTGCTTCTTCCACAACTTTAATTCCATTCATGCAAACACTACAAAAATCCAAATCGATTTCGACCGGAAGCTCGGGCTGCAAAGATTCGGTTTCGTCGAAAAATTCAGCGTTGTATTGA

Coding sequence (CDS)

ATGCCGTCGTCAGCATCAGCTCCGGCGTCTCCTCTGTCGGTGTCTCAGTTGCAGAATTCTGCAACTCAACCTTCCCCTCGCGAACACTTGACCGATGCTGCAACCAATAATGATGGATTTAGTAATGCGGAGGAGAAGAAACCTGATTTGTTGGATCAATCTGATTTTGACCATTTTAATTCCGTTGAGAAGTACAAGAAATATGAGGCTGACTACGCTCAACGCCTAATTGCCAAATACTATTCAAAGAGAAATCTCTATGGAGGCAATTGCTTTGCTTCTTCCACAACTTTAATTCCATTCATGCAAACACTACAAAAATCCAAATCGATTTCGACCGGAAGCTCGGGCTGCAAAGATTCGGTTTCGTCGAAAAATTCAGCGTTGTATTGA

Protein sequence

MPSSASAPASPLSVSQLQNSATQPSPREHLTDAATNNDGFSNAEEKKPDLLDQSDFDHFNSVEKYKKYEADYAQRLIAKYYSKRNLYGGNCFASSTTLIPFMQTLQKSKSISTGSSGCKDSVSSKNSALY
Homology
[Close]
BLAST of Sed0026794 vs. NCBI nr
Match: KAG6589581.1 (hypothetical protein SDJN03_15004, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 146.4 bits (368), Expect = 1.8e-31
Identity = 76/99 (76.77%), Postives = 87/99 (87.88%), Query Frame = 0 

Query: 1  MPSSASAPASPLSVSQLQNSATQPSPREHLTDAATNNDGFSNAEEKKPDLLDQ-SDFDHF 60
          MPSSASAPASP S S  QNSATQPSPR+HL DAATNNDG  +A+EKKPDLLDQ  DFD+F
Sbjct: 1  MPSSASAPASPPSASHSQNSATQPSPRKHLADAATNNDGLFDADEKKPDLLDQFEDFDNF 60

Query: 61 NSVEKYKKYEADYAQRLIAKYYSKRNLYGGNCFASSTTL 99
          NS+EKYKKYEADYAQRL+AKY+SK+NLYGGN +  +TT+
Sbjct: 61 NSIEKYKKYEADYAQRLMAKYFSKKNLYGGNIYEENTTI 99

[Close]
BLAST of Sed0026794 vs. NCBI nr
Match: KGN63759.1 (hypothetical protein Csa_014356 [Cucumis sativus])

HSP 1 Score: 137.5 bits (345), Expect = 8.2e-29
Identity = 73/99 (73.74%), Postives = 84/99 (84.85%), Query Frame = 0 

Query: 1  MPSSASAPASPLSVSQLQNSATQPSPREHLTDAATNNDGFSNAEEKKPDLLDQ-SDFDHF 60
          MPSSASAPASP S S  QNSATQPSPR++L +AA NNDG  NAEEKKPDL DQ  DFD+F
Sbjct: 1  MPSSASAPASPPSASLSQNSATQPSPRKNLAEAANNNDGLFNAEEKKPDLSDQFEDFDNF 60

Query: 61 NSVEKYKKYEADYAQRLIAKYYSKRNLYGGNCFASSTTL 99
           S+EKY+KYEADYAQRL+AKY+SK+NLYGGN F  +TT+
Sbjct: 61 TSIEKYQKYEADYAQRLMAKYFSKKNLYGGNIFEENTTI 99

[Close]
BLAST of Sed0026794 vs. NCBI nr
Match: XP_022134661.1 (uncharacterized protein LOC111006878 [Momordica charantia])

HSP 1 Score: 128.3 bits (321), Expect = 5.0e-26
Identity = 72/100 (72.00%), Postives = 80/100 (80.00%), Query Frame = 0 

Query: 1   MPSSASAPASPLSVSQLQNSATQPSPREHLTD-AATNNDGFSNAEEKKPDLLDQ-SDFDH 60
           MPSSASAPASP S S  QNSAT  SP +HL D AAT+NDG  +AEEKKPDL DQ  DFD 
Sbjct: 1   MPSSASAPASPPSASHSQNSATHSSPPKHLADAAATSNDGLLDAEEKKPDLSDQFEDFDD 60

Query: 61  FNSVEKYKKYEADYAQRLIAKYYSKRNLYGGNCFASSTTL 99
           FNS EK+KKYEADYAQRL+AKY+SK+NLYGGN F   TT+
Sbjct: 61  FNSTEKFKKYEADYAQRLMAKYFSKKNLYGGNIFEEKTTI 100

[Close]
BLAST of Sed0026794 vs. NCBI nr
Match: XP_008453324.1 (PREDICTED: uncharacterized protein LOC103494077 [Cucumis melo] >KAA0058023.1 uncharacterized protein E6C27_scaffold274G003280 [Cucumis melo var. makuwa] >TYJ98246.1 uncharacterized protein E5676_scaffold346G00180 [Cucumis melo var. makuwa])

HSP 1 Score: 126.7 bits (317), Expect = 1.4e-25
Identity = 70/99 (70.71%), Postives = 82/99 (82.83%), Query Frame = 0 

Query: 1  MPSSASAPASPLSVSQLQNSATQPSPREHLTDAATNNDGFSNAEEKKPDLLDQ-SDFDHF 60
          MPSSASAPASP S S  QNSATQPSPR++L +AA +ND    AEEKKPDL DQ  DF +F
Sbjct: 1  MPSSASAPASPTSASHSQNSATQPSPRKNLAEAANSND----AEEKKPDLTDQFEDFYNF 60

Query: 61 NSVEKYKKYEADYAQRLIAKYYSKRNLYGGNCFASSTTL 99
          NS+EKY+KYEADYAQRL+AKY+SK+NLYGGN F  +TT+
Sbjct: 61 NSIEKYQKYEADYAQRLMAKYFSKKNLYGGNIFEENTTV 95

[Close]
BLAST of Sed0026794 vs. NCBI nr
Match: KAG7023270.1 (hypothetical protein SDJN02_14295 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 126.3 bits (316), Expect = 1.9e-25
Identity = 76/149 (51.01%), Postives = 87/149 (58.39%), Query Frame = 0 

Query: 1   MPSSASAPASPLSVSQLQNSATQPSPREHLTDAATNNDGFSNAEEKKPDLLDQ------- 60
           MPSSASAPASP S S  QNSATQPSPR+HL DAATNNDG  +A+EKKPDLLDQ       
Sbjct: 1   MPSSASAPASPPSASHSQNSATQPSPRKHLADAATNNDGLFDADEKKPDLLDQFEYDPFL 60

Query: 61  --------------------------------------------SDFDHFNSVEKYKKYE 99
                                                        DFD+FNS+EKYKKYE
Sbjct: 61  FFLSVFDLKFSFAFEVEIGTVSMSQQFQLQFLSLRDLLDGFPSDLDFDNFNSIEKYKKYE 120

[Close]
BLAST of Sed0026794 vs. ExPASy TrEMBL
Match: A0A0A0LRW5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G015050 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 4.0e-29
Identity = 73/99 (73.74%), Postives = 84/99 (84.85%), Query Frame = 0 

Query: 1  MPSSASAPASPLSVSQLQNSATQPSPREHLTDAATNNDGFSNAEEKKPDLLDQ-SDFDHF 60
          MPSSASAPASP S S  QNSATQPSPR++L +AA NNDG  NAEEKKPDL DQ  DFD+F
Sbjct: 1  MPSSASAPASPPSASLSQNSATQPSPRKNLAEAANNNDGLFNAEEKKPDLSDQFEDFDNF 60

Query: 61 NSVEKYKKYEADYAQRLIAKYYSKRNLYGGNCFASSTTL 99
           S+EKY+KYEADYAQRL+AKY+SK+NLYGGN F  +TT+
Sbjct: 61 TSIEKYQKYEADYAQRLMAKYFSKKNLYGGNIFEENTTI 99

[Close]
BLAST of Sed0026794 vs. ExPASy TrEMBL
Match: A0A6J1BYF6 (uncharacterized protein LOC111006878 OS=Momordica charantia OX=3673 GN=LOC111006878 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 2.4e-26
Identity = 72/100 (72.00%), Postives = 80/100 (80.00%), Query Frame = 0 

Query: 1   MPSSASAPASPLSVSQLQNSATQPSPREHLTD-AATNNDGFSNAEEKKPDLLDQ-SDFDH 60
           MPSSASAPASP S S  QNSAT  SP +HL D AAT+NDG  +AEEKKPDL DQ  DFD 
Sbjct: 1   MPSSASAPASPPSASHSQNSATHSSPPKHLADAAATSNDGLLDAEEKKPDLSDQFEDFDD 60

Query: 61  FNSVEKYKKYEADYAQRLIAKYYSKRNLYGGNCFASSTTL 99
           FNS EK+KKYEADYAQRL+AKY+SK+NLYGGN F   TT+
Sbjct: 61  FNSTEKFKKYEADYAQRLMAKYFSKKNLYGGNIFEEKTTI 100

[Close]
BLAST of Sed0026794 vs. ExPASy TrEMBL
Match: A0A5D3BGU2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold346G00180 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 7.0e-26
Identity = 70/99 (70.71%), Postives = 82/99 (82.83%), Query Frame = 0 

Query: 1  MPSSASAPASPLSVSQLQNSATQPSPREHLTDAATNNDGFSNAEEKKPDLLDQ-SDFDHF 60
          MPSSASAPASP S S  QNSATQPSPR++L +AA +ND    AEEKKPDL DQ  DF +F
Sbjct: 1  MPSSASAPASPTSASHSQNSATQPSPRKNLAEAANSND----AEEKKPDLTDQFEDFYNF 60

Query: 61 NSVEKYKKYEADYAQRLIAKYYSKRNLYGGNCFASSTTL 99
          NS+EKY+KYEADYAQRL+AKY+SK+NLYGGN F  +TT+
Sbjct: 61 NSIEKYQKYEADYAQRLMAKYFSKKNLYGGNIFEENTTV 95

[Close]
BLAST of Sed0026794 vs. ExPASy TrEMBL
Match: A0A1S3BVY9 (uncharacterized protein LOC103494077 OS=Cucumis melo OX=3656 GN=LOC103494077 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 7.0e-26
Identity = 70/99 (70.71%), Postives = 82/99 (82.83%), Query Frame = 0 

Query: 1  MPSSASAPASPLSVSQLQNSATQPSPREHLTDAATNNDGFSNAEEKKPDLLDQ-SDFDHF 60
          MPSSASAPASP S S  QNSATQPSPR++L +AA +ND    AEEKKPDL DQ  DF +F
Sbjct: 1  MPSSASAPASPTSASHSQNSATQPSPRKNLAEAANSND----AEEKKPDLTDQFEDFYNF 60

Query: 61 NSVEKYKKYEADYAQRLIAKYYSKRNLYGGNCFASSTTL 99
          NS+EKY+KYEADYAQRL+AKY+SK+NLYGGN F  +TT+
Sbjct: 61 NSIEKYQKYEADYAQRLMAKYFSKKNLYGGNIFEENTTV 95

[Close]
BLAST of Sed0026794 vs. ExPASy TrEMBL
Match: A0A6J5UZ14 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS34186 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 1.4e-13
Identity = 52/101 (51.49%), Postives = 65/101 (64.36%), Query Frame = 0 

Query: 1   MPSSASAPASPLSVSQLQNSATQP---SPREHLTDAATNNDGFSNAEEKKPDLLDQSDFD 60
           +PS +S PASP S S   NSAT+P   SP     DA  NN G  N +EKKPD+    D  
Sbjct: 4   VPSPSSPPASPSSASSSDNSATEPIPHSPPNPQVDAGVNN-GVLNVDEKKPDISAYFDDL 63

Query: 61  HFNSVEKYKKYEADYAQRLIAKYYSKRNLYGGNCFASSTTL 99
           H  ++EK+KKYEADY++ L AKY+SK+NLYGGN F    T+
Sbjct: 64  HSANIEKFKKYEADYSRWLTAKYFSKKNLYGGNIFDEDMTI 103

The following BLAST results are available for this feature:
BLAST of Sed0026794 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6589581.11.8e-3176.77hypothetical protein SDJN03_15004, partial [Cucurbita argyrosperma subsp. sorori... [more]
KGN63759.18.2e-2973.74hypothetical protein Csa_014356 [Cucumis sativus][more]
XP_022134661.15.0e-2672.00uncharacterized protein LOC111006878 [Momordica charantia][more]
XP_008453324.11.4e-2570.71PREDICTED: uncharacterized protein LOC103494077 [Cucumis melo] >KAA0058023.1 unc... [more]
KAG7023270.11.9e-2551.01hypothetical protein SDJN02_14295 [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of Sed0026794 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sed0026794 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LRW54.0e-2973.74Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G015050 PE=4 SV=1[more]
A0A6J1BYF62.4e-2672.00uncharacterized protein LOC111006878 OS=Momordica charantia OX=3673 GN=LOC111006... [more]
A0A5D3BGU27.0e-2670.71Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3BVY97.0e-2670.71uncharacterized protein LOC103494077 OS=Cucumis melo OX=3656 GN=LOC103494077 PE=... [more]
A0A6J5UZ141.4e-1351.49Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS34186 PE=4 S... [more]
BLAST of Sed0026794 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..41
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 110..130
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..53
NoneNo IPR availablePANTHERPTHR36078BNACNNG21220D PROTEINcoord: 4..98
NoneNo IPR availablePANTHERPTHR36078:SF2BNACNNG21220D PROTEINcoord: 4..98

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0026794.1Sed0026794.1mRNA