Sed0026756 (gene) Chayote v1

Overview


Name	Sed0026756
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Usher syndrome type-1C-binding protein 1
Location	LG07: 5789096 .. 5791354 (-)
RNA-Seq Expression	Sed0026756
Synteny	Sed0026756

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTCTCTCCTCACAATGGCGACGCTTTCTCTCTCCTCTTCAAGCTTTCTCCGCCACCATTCTCCACAGTCCGTCACCGCCTCTGCAATCGCCGTTCCTCGCCGGTCAAGCTTCCATGCTCCGCCGGAAATTCTCTTCTCTCCGATCAATCGCCACCGTTCATCTCTCTTGCTCTCCAATTTATGCGCTAAATCCACGGTTTGCAGCGCAGCAGTACGGCCGCCGCCGGACTCCGGTCCACCTCCTGAGAAGGATCCTGTTCCTCTAAAAGGTTATTATTCTTTTTTCCGGTGTTTTTCTTGCTCAATTTGATGGATTGAACTGCTAGTGCTAAAACCTAGAAATTTTATTGCATCGAGCTTGGTTATGTATTTAGGTTATGGTTGGAAATAGCACAAATTACATCAATAGCATCGTTTTTAGAATGATTTTCTAGCTCTTCTTTGAACCACTGGCCAGCCGCTTGTAATTTTTTTTTTTTGAGTTCAACCAGAACAGTTACCGCCACAGGGGAATCGAACTCGTGATCTCATGGATAAACTTAGGTCGATTAAACTATTACTCTAGATAAAGGAATAGCCTTTCCTCGGTTGTCATAATTGTTTTTAGAAAAAATTATTTTAGGGTGAATATGTTGATCAAAGTTGATAAGGGGATTGTGGTCCTAGCAGTCGGTCTTACAAAACTAAGAATAAATAAGTTCAATTTACGGTGACTATCTATTAAGGATTAATTTTTTATGAGTTTCGAATATAATCGGATCAAGCAGTTGGTTGTGGTGTGCATAAAAGGATCTTGACCTAGACATTTAGAGAAATTATAAATTTAGGAAAGAAATGAAAAGAAAAGGAAAGGAGATACATGGAAAGGGAAGGAAATTCCTTTCATAAAATAATTCGTCATGTTTTTAGGGTCATTTTAGGGTATCTTGGTCAGTGTAGATGAGGGATTATTAGCAATGTTTTAAAAGGCGAAGCTCTAACGTTTAGCCTCGAGTCTTATGACTTCGTTGGATCATAAGAGGCTTACGCTTCTATGAGAATGCACCGAGGCTTAAGTCCCCACACTGGCCTAGAATTACTAGGAGAACAGTATAATTCTTTTAATCGTTTCAAAACAGTCAATTTTGTTGTGATTATTTGTTGGCTTATTTTCCTCTCGCATCTCTTGTTGTATTCACTAATTGGCTTGGAAAATTCACTTATGTTTCATTCATCAGCGAAATTGTTTCTTATTCCAAAAAAATTAAATCCTATTAGTGTGGTGCGACACTATATGTATTTTTACGCAAGTATTATGCTCTATTGTACAGGTTTACACAAATTTAGAATTTTATAATGTTTTTAATTAAAATTGAGCCTTACGCCTTGCCTCTCCAAGAGGTAAAGCCTCGAGGCCGCCTTTAGCCTTTTAAAACATTGATTATTAGATTGAGTCCATTGATAATACTTGTACTTTCCGAGACTCAAGTGTGACTTTACTCCTTTGATGTCTCCCAGTGCCTGGCCTACGGACGGGCGTGGTTACCCTTGTTTCAAAAAAAAAAAAAAAATACTTGTACTTCTTTTCTTGCTTGATAATTCATATTGTAACTTGGTCAGCAAGTGGTGGTCGGTAGAGACTTTCGGTCTCTAATATATGTTATTTTGGAAGGTTCCGGGTTCAAAATCCACGAGTGAGTCTAATTCTAAAACCCTTTTCTCTTTTGGGTTTGGCTTTAGGATGGGTGTGAGTGTCTTCGTGTACGTAGTAAAGCAAAACTTTGATCTATTTTGAATTGCATGCTGGGGGTACTTTGATCTATTTTGAATTGCATGCTGGGGTTCTTTGATGTGAAAAAACCATGTATCCTTATATACTCATATCACTGTTGAGCAGGTTTTCCAGTATTTTTATCAAAATTTGGAGACAGAGTACAGATTTTCTTTGCTGTGTTATTCTGGATGTCCCTCTTCTTCTGGACTTCTGCATTGGATGGAAAAAATAGGCCTAACAAGGGCTCTCGATTTAGACGGTAGTTTTGTAAATAAAAAAATTCATTATTTTGTAAAGTGTTGCAGGTTAATATATAAGTTACTGTTAGGCTACTTGATTATAATTTATGGTATATAGACAGCCTTAAACGAGGTAGATATAGCTCTATTAGATGTTGATATCAAAAGTATACTGTCACGGAAAGTCGTTTTCTGTATCACATTCTTCTATTCAAGCTTCTTAACATTTCCTGGATCCTAGTCTGATTATTTTTATATCCGTCG

mRNA sequence

CTTCTCTCTCCTCACAATGGCGACGCTTTCTCTCTCCTCTTCAAGCTTTCTCCGCCACCATTCTCCACAGTCCGTCACCGCCTCTGCAATCGCCGTTCCTCGCCGGTCAAGCTTCCATGCTCCGCCGGAAATTCTCTTCTCTCCGATCAATCGCCACCGTTCATCTCTCTTGCTCTCCAATTTATGCGCTAAATCCACGGTTTGCAGCGCAGCAGTACGGCCGCCGCCGGACTCCGGTCCACCTCCTGAGAAGGATCCTGTTCCTCTAAAAGGTTTTCCAGTATTTTTATCAAAATTTGGAGACAGAGTACAGATTTTCTTTGCTGTGTTATTCTGGATGTCCCTCTTCTTCTGGACTTCTGCATTGGATGGAAAAAATAGGCCTAACAAGGGCTCTCGATTTAGACGGTAGTTTTGTAAATAAAAAAATTCATTATTTTGTAAAGTGTTGCAGGTTAATATATAAGTTACTGTTAGGCTACTTGATTATAATTTATGGTATATAGACAGCCTTAAACGAGGTAGATATAGCTCTATTAGATGTTGATATCAAAAGTATACTGTCACGGAAAGTCGTTTTCTGTATCACATTCTTCTATTCAAGCTTCTTAACATTTCCTGGATCCTAGTCTGATTATTTTTATATCCGTCG

Coding sequence (CDS)

ATGGCGACGCTTTCTCTCTCCTCTTCAAGCTTTCTCCGCCACCATTCTCCACAGTCCGTCACCGCCTCTGCAATCGCCGTTCCTCGCCGGTCAAGCTTCCATGCTCCGCCGGAAATTCTCTTCTCTCCGATCAATCGCCACCGTTCATCTCTCTTGCTCTCCAATTTATGCGCTAAATCCACGGTTTGCAGCGCAGCAGTACGGCCGCCGCCGGACTCCGGTCCACCTCCTGAGAAGGATCCTGTTCCTCTAAAAGGTTTTCCAGTATTTTTATCAAAATTTGGAGACAGAGTACAGATTTTCTTTGCTGTGTTATTCTGGATGTCCCTCTTCTTCTGGACTTCTGCATTGGATGGAAAAAATAGGCCTAACAAGGGCTCTCGATTTAGACGGTAG

Protein sequence

MATLSLSSSSFLRHHSPQSVTASAIAVPRRSSFHAPPEILFSPINRHRSSLLLSNLCAKSTVCSAAVRPPPDSGPPPEKDPVPLKGFPVFLSKFGDRVQIFFAVLFWMSLFFWTSALDGKNRPNKGSRFRR

Homology

[Close]

BLAST of Sed0026756 vs. NCBI nr
Match: KAG6593392.1 (hypothetical protein SDJN03_12868, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025739.1 hypothetical protein SDJN02_12237, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 191.8 bits (486), Expect = 3.7e-45
Identity = 100/132 (75.76%), Postives = 112/132 (84.85%), Query Frame = 0


Query: 1   MATLSLSSSSFLRHHSPQSVTASAIAVPRRSSFHAPPEILFSPINRHRSSLLL-SNLCAK 60
           MA  SLS+S+ L +H  ++VTA AIA+P  SSFHAPPEI FSP++  RSSLLL SN CAK
Sbjct: 1   MAAPSLSTSNAL-YHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPCAK 60

Query: 61  STVCSAAVRPPPDSGPPPEKDPVPLKGFPVFLSKFGDRVQIFFAVLFWMSLFFWTSALDG 120
           S VC+AAVRPPPDS PPP++DP+ LKGFP   SKFGDRVQIFFAVLFWMSLFFWTSALDG
Sbjct: 61  SAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSLFFWTSALDG 120

Query: 121 KNRPNKGSRFRR 132
           KNRPNKGSRFRR
Sbjct: 121 KNRPNKGSRFRR 131

[Close]

BLAST of Sed0026756 vs. NCBI nr
Match: XP_023004358.1 (uncharacterized protein LOC111497700 isoform X1 [Cucurbita maxima])

HSP 1 Score: 188.7 bits (478), Expect = 3.1e-44
Identity = 99/132 (75.00%), Postives = 112/132 (84.85%), Query Frame = 0


Query: 1   MATLSLSSSSFLRHHSPQSVTASAIAVPRRSSFHAPPEILFSPINRHRSSLLLS-NLCAK 60
           MA+ SLS+S+ L +H  ++VTA AIA+P  SSFHA PEI FSP++  RSSLLLS N CAK
Sbjct: 1   MASPSLSTSNAL-YHPSRAVTAPAIAIPLFSSFHARPEISFSPLHHRRSSLLLSFNPCAK 60

Query: 61  STVCSAAVRPPPDSGPPPEKDPVPLKGFPVFLSKFGDRVQIFFAVLFWMSLFFWTSALDG 120
           S VC+AAVRPPPDS PPP++DP+ LKGFP   SKFGDRVQIFFAVLFWMSLFFWTSALDG
Sbjct: 61  SAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSLFFWTSALDG 120

Query: 121 KNRPNKGSRFRR 132
           KNRPNKGSRFRR
Sbjct: 121 KNRPNKGSRFRR 131

[Close]

BLAST of Sed0026756 vs. NCBI nr
Match: XP_023513765.1 (uncharacterized protein LOC111778275 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 188.3 bits (477), Expect = 4.1e-44
Identity = 99/132 (75.00%), Postives = 111/132 (84.09%), Query Frame = 0


Query: 1   MATLSLSSSSFLRHHSPQSVTASAIAVPRRSSFHAPPEILFSPINRHRSSLLL-SNLCAK 60
           MA+ SLS+S+ L +H  ++VTA AIA+P  SSFHAPPEI FSP++  RSSLLL SN CAK
Sbjct: 1   MASPSLSTSNAL-YHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPCAK 60

Query: 61  STVCSAAVRPPPDSGPPPEKDPVPLKGFPVFLSKFGDRVQIFFAVLFWMSLFFWTSALDG 120
           S VC AAVRPPPDS PPP++DP+ LKGF    SKFGDRVQIFFAVLFWMSLFFWTSALDG
Sbjct: 61  SAVCPAAVRPPPDSDPPPDEDPIRLKGFTAIFSKFGDRVQIFFAVLFWMSLFFWTSALDG 120

Query: 121 KNRPNKGSRFRR 132
           KNRPNKGSRFRR
Sbjct: 121 KNRPNKGSRFRR 131

[Close]

BLAST of Sed0026756 vs. NCBI nr
Match: XP_022959617.1 (uncharacterized protein LOC111460643 isoform X1 [Cucurbita moschata])

HSP 1 Score: 187.2 bits (474), Expect = 9.1e-44
Identity = 99/132 (75.00%), Postives = 111/132 (84.09%), Query Frame = 0


Query: 1   MATLSLSSSSFLRHHSPQSVTASAIAVPRRSSFHAPPEILFSPINRHRSSLLL-SNLCAK 60
           MA  SLS+S+ L +H  ++VTA AIA+P  SSFHAPPEI FSP++  RSSLLL SN  AK
Sbjct: 1   MAAPSLSTSNAL-YHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPRAK 60

Query: 61  STVCSAAVRPPPDSGPPPEKDPVPLKGFPVFLSKFGDRVQIFFAVLFWMSLFFWTSALDG 120
           S VC+AAVRPPPDS PPP++DP+ LKGFP   SKFGDRVQIFFAVLFWMSLFFWTSALDG
Sbjct: 61  SAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSLFFWTSALDG 120

Query: 121 KNRPNKGSRFRR 132
           KNRPNKGSRFRR
Sbjct: 121 KNRPNKGSRFRR 131

[Close]

BLAST of Sed0026756 vs. NCBI nr
Match: XP_038899182.1 (uncharacterized protein LOC120086544 [Benincasa hispida])

HSP 1 Score: 180.3 bits (456), Expect = 1.1e-41
Identity = 99/132 (75.00%), Postives = 104/132 (78.79%), Query Frame = 0


Query: 1   MATLSLSSSSFLRHHSPQSVTASAIAVPRRSSFHAPPEILFSPINRHRSSLLL-SNLCAK 60
           MATLSL       H S QSVTAS+IAVP  S+FHA PEI FS   R  S LLL S+ C K
Sbjct: 1   MATLSL-------HRSSQSVTASSIAVPLCSTFHARPEICFSSHRRRLSPLLLSSDSCHK 60

Query: 61  STVCSAAVRPPPDSGPPPEKDPVPLKGFPVFLSKFGDRVQIFFAVLFWMSLFFWTSALDG 120
           S VCSAAVRPPPDS PPPE+DP+ LKGFP  LSKF DRVQIFFAVLFWMSLFFWTSALDG
Sbjct: 61  SAVCSAAVRPPPDSDPPPEEDPIRLKGFPAILSKFRDRVQIFFAVLFWMSLFFWTSALDG 120

Query: 121 KNRPNKGSRFRR 132
           KNRPNKGSRFRR
Sbjct: 121 KNRPNKGSRFRR 125

[Close]

BLAST of Sed0026756 vs. ExPASy TrEMBL
Match: A0A6J1KZ93 (uncharacterized protein LOC111497700 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497700 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.5e-44
Identity = 99/132 (75.00%), Postives = 112/132 (84.85%), Query Frame = 0


Query: 1   MATLSLSSSSFLRHHSPQSVTASAIAVPRRSSFHAPPEILFSPINRHRSSLLLS-NLCAK 60
           MA+ SLS+S+ L +H  ++VTA AIA+P  SSFHA PEI FSP++  RSSLLLS N CAK
Sbjct: 1   MASPSLSTSNAL-YHPSRAVTAPAIAIPLFSSFHARPEISFSPLHHRRSSLLLSFNPCAK 60

Query: 61  STVCSAAVRPPPDSGPPPEKDPVPLKGFPVFLSKFGDRVQIFFAVLFWMSLFFWTSALDG 120
           S VC+AAVRPPPDS PPP++DP+ LKGFP   SKFGDRVQIFFAVLFWMSLFFWTSALDG
Sbjct: 61  SAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSLFFWTSALDG 120

Query: 121 KNRPNKGSRFRR 132
           KNRPNKGSRFRR
Sbjct: 121 KNRPNKGSRFRR 131

[Close]

BLAST of Sed0026756 vs. ExPASy TrEMBL
Match: A0A6J1H516 (uncharacterized protein LOC111460643 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460643 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 4.4e-44
Identity = 99/132 (75.00%), Postives = 111/132 (84.09%), Query Frame = 0


Query: 1   MATLSLSSSSFLRHHSPQSVTASAIAVPRRSSFHAPPEILFSPINRHRSSLLL-SNLCAK 60
           MA  SLS+S+ L +H  ++VTA AIA+P  SSFHAPPEI FSP++  RSSLLL SN  AK
Sbjct: 1   MAAPSLSTSNAL-YHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPRAK 60

Query: 61  STVCSAAVRPPPDSGPPPEKDPVPLKGFPVFLSKFGDRVQIFFAVLFWMSLFFWTSALDG 120
           S VC+AAVRPPPDS PPP++DP+ LKGFP   SKFGDRVQIFFAVLFWMSLFFWTSALDG
Sbjct: 61  SAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSLFFWTSALDG 120

Query: 121 KNRPNKGSRFRR 132
           KNRPNKGSRFRR
Sbjct: 121 KNRPNKGSRFRR 131

[Close]

BLAST of Sed0026756 vs. ExPASy TrEMBL
Match: A0A6J1CXJ1 (uncharacterized protein LOC111015178 OS=Momordica charantia OX=3673 GN=LOC111015178 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 2.3e-40
Identity = 90/119 (75.63%), Postives = 95/119 (79.83%), Query Frame = 0


Query: 14  HHSPQSVTASAIAVPRRSSFHAPPEILFSPINRHRSSLLL-SNLCAKSTVCSAAVRPPPD 73
           +HS  S+TAS IAVP  S F  PPEI FS  +R RSSLLL SN  A S  CSAAVRPPPD
Sbjct: 5   YHSTHSLTASTIAVPLCSRFRVPPEICFSSHHRRRSSLLLSSNPYASSAACSAAVRPPPD 64

Query: 74  SGPPPEKDPVPLKGFPVFLSKFGDRVQIFFAVLFWMSLFFWTSALDGKNRPNKGSRFRR 132
           SGPPP+KDP+  KGFP F SKF DRVQIFFAVLFWMSLFFWTS LDGKNRPNKGSRFRR
Sbjct: 65  SGPPPDKDPIRAKGFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLDGKNRPNKGSRFRR 123

[Close]

BLAST of Sed0026756 vs. ExPASy TrEMBL
Match: A0A1S3CE06 (uncharacterized protein LOC103499798 OS=Cucumis melo OX=3656 GN=LOC103499798 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 2.9e-35
Identity = 84/119 (70.59%), Postives = 89/119 (74.79%), Query Frame = 0


Query: 14  HHSPQSVTASAIAVPRRSSFHAPPEILFSPINRHRSSLLL-SNLCAKSTVCSAAVRPPPD 73
           H S  SV AS+IA+P  S+FH   +I FSP  R  S L   SN  AKS VCSAAVRPPPD
Sbjct: 7   HRSSHSVAASSIALPLCSTFHFRSKICFSPPRRRLSPLFFSSNSYAKSVVCSAAVRPPPD 66

Query: 74  SGPPPEKDPVPLKGFPVFLSKFGDRVQIFFAVLFWMSLFFWTSALDGKNRPNKGSRFRR 132
           S PPPE+DPV L G P   SKF DRVQIF AVLFWMSLFFWTSALDGKNRPNKGSRFRR
Sbjct: 67  SDPPPEEDPVRLTGLPAIFSKFRDRVQIFLAVLFWMSLFFWTSALDGKNRPNKGSRFRR 125

[Close]

BLAST of Sed0026756 vs. ExPASy TrEMBL
Match: A0A0A0K8T0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G432560 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 3.2e-34
Identity = 88/132 (66.67%), Postives = 94/132 (71.21%), Query Frame = 0


Query: 1   MATLSLSSSSFLRHHSPQSVTASAIAVPRRSSFHAPPEILFSPINRHRSSLLL-SNLCAK 60
           MA LS S      H S QSV AS+IA+P  S+FH   EI FS   R  S L   SN  A+
Sbjct: 1   MAILSTS-----LHRSSQSVAASSIALPLCSTFHLRSEICFSLHRRRLSPLFFSSNSYAE 60

Query: 61  STVCSAAVRPPPDSGPPPEKDPVPLKGFPVFLSKFGDRVQIFFAVLFWMSLFFWTSALDG 120
           S VCSAAVRPPPDS PPPE+DPV L G P   SKF DRVQIF AVLFWMSLFFWTSALDG
Sbjct: 61  SVVCSAAVRPPPDSDPPPEEDPVRLTGLPAIFSKFRDRVQIFLAVLFWMSLFFWTSALDG 120

Query: 121 KNRPNKGSRFRR 132
           +NRPNKGSRFRR
Sbjct: 121 RNRPNKGSRFRR 127

[Close]

BLAST of Sed0026756 vs. TAIR 10
Match: AT3G15780.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52550.1); Has 20 Blast hits to 20 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 63.2 bits (152), Expect = 1.8e-10
Identity = 42/116 (36.21%), Postives = 60/116 (51.72%), Query Frame = 0


Query: 22  ASAIAVPRRSS--FHAPPEILFSP---INRHRSSLLLSNLCAKSTVCSAAVRPPPDSGPP 81
           A A++ P  S+  +H      FSP   ++R  + LL S    +    +     PP   PP
Sbjct: 2   AMALSNPTTSTNLYHYSILSPFSPPYHLHRRNTVLLASPRRLRRLAVAGGPPSPPGPDPP 61

Query: 82  PEKDPVPLKGFPVFLSKFGDRVQIFFAVLFWMSLFFWTSALD--GKNRPNKGSRFR 131
           P +D   L+G    +++  DRV+IF AV FWM LFFW +  D  GK +  KGSRF+
Sbjct: 62  PPEDTTQLEGLVGAVTRVQDRVKIFLAVFFWMFLFFWVTVTDGTGKGKGKKGSRFK 117

[Close]

BLAST of Sed0026756 vs. TAIR 10
Match: AT1G52550.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15780.1); Has 53 Blast hits to 51 proteins in 18 species: Archae - 0; Bacteria - 8; Metazoa - 4; Fungi - 0; Plants - 23; Viruses - 8; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 56.2 bits (134), Expect = 2.3e-08
Identity = 44/115 (38.26%), Postives = 53/115 (46.09%), Query Frame = 0


Query: 30  RSSFHAPPEILFSPINRHRSSLLLSN----LCAKSTVCSAAVRP-----PPDSGPPPEKD 89
           R +   P    FSP    RSS L S     +     V   AV P     PP   PPP K+
Sbjct: 20  RKNHPLPSPSFFSPF---RSSPLPSQTLFLVPTPKPVRRIAVAPLGPPTPPSPDPPPPKN 79

Query: 90  PVPLKGFPVFLSKFGDRVQIFFAVLFWMSLFFWTSALDGK-----NRPNKGSRFR 131
              L       S   DRV+IF +VL W+SLFFW SAL G+      +  KGSRF+
Sbjct: 80  TTELTSLVGVASMIQDRVKIFLSVLIWISLFFWASALQGRGSKGNGKGKKGSRFK 131

The following BLAST results are available for this feature:

BLAST of Sed0026756 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6593392.1	3.7e-45	75.76	hypothetical protein SDJN03_12868, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023004358.1	3.1e-44	75.00	uncharacterized protein LOC111497700 isoform X1 [Cucurbita maxima]	[more]
XP_023513765.1	4.1e-44	75.00	uncharacterized protein LOC111778275 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022959617.1	9.1e-44	75.00	uncharacterized protein LOC111460643 isoform X1 [Cucurbita moschata]	[more]
XP_038899182.1	1.1e-41	75.00	uncharacterized protein LOC120086544 [Benincasa hispida]	[more]

BLAST of Sed0026756 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0026756 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KZ93	1.5e-44	75.00	uncharacterized protein LOC111497700 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1H516	4.4e-44	75.00	uncharacterized protein LOC111460643 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1CXJ1	2.3e-40	75.63	uncharacterized protein LOC111015178 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A1S3CE06	2.9e-35	70.59	uncharacterized protein LOC103499798 OS=Cucumis melo OX=3656 GN=LOC103499798 PE=...	[more]
A0A0A0K8T0	3.2e-34	66.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G432560 PE=4 SV=1	[more]

BLAST of Sed0026756 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15780.1	1.8e-10	36.21	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G52550.1	2.3e-08	38.26	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37706	TRANSMEMBRANE PROTEIN	coord: 9..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0026756.1	Sed0026756.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane