Sed0026647 (gene) Chayote v1

Overview


Name	Sed0026647
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Centromere protein X
Location	LG08: 359010 .. 360201 (+)
RNA-Seq Expression	Sed0026647
Synteny	Sed0026647

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAAATCGCATTCGATCTTGTAATTCCTTCATCTCCACGATCTATCGTTTAATTTGAAGTTCAATTCGTCGATTCTTTGTTCATGTTTTCTAATCTTTAGCTGCTTGTTTGCATAATTTACAGGATCTGATTCACGCCATCTTCAAGCTCGAGTGGAGCAGAAGATCACTTGGTTCGGATCACTCTCTCTCATCCTGCTTATCTTTATCTTTTCCTTTCTGATTCGTTCTTCATTTTCCGATTTGGTGCTTGGATTTATTCAGAGCGCGAGAAAAACGAGAGTTCTGATGCTATGGATTGCGAGGTGAGTGTCAATCCCTGAGGTTCTGGCGTAAAATTTATGTCCAACGTGTATTGTTTTCTCTCGTGAAATTTTTTTCGTTGTTTTAGGTTTCAATCTTTGAATGCTTTGGTTAGTTCTTGAAGTTTTTACGTTTCCACGATTGTTGTGGACATATCTACTACCAAACGTAGGCACATCAGATATTTATATTCGAATGTAACTGCTGCGAACTTTGAGTACGGTTCTTTCTCGACTAGACCAGTGAGATTGATCTTTACCTGACTTATTTTCTATAGGTTGAGGCTGGAACATCCAAGAAGGGCAGACCAATGTCAGGTATAATTATATACATATATTTGAAGAAATAATTATATCTATATATATGTCTACATAATTCAAAGAGGTAAAATGAATTTTATTTATTTATTTAGTTTTGATAGTTGACTGTCTAAGCCAAGTTGCACGCACTTCGAATATAGGAAATTTGTAAGAAAATTAATTCGTAAGTAGGTGACATGACCACCATGGATTGAATCAATCACCACCTATTAGTTTTCCCAGACCTTACTAAGTGCGTTAACTCCGTCGAGCTTGTGTTGTTTGAATTTACCAACTACCAAGAGATGAAGAAACCATTCTAACTCTGCTATTCTTATGAAGCCAATGCAAATGCACTTAAATTGAGCTCTAAACTTCTACAGATTTTTGTCTCAGGTATCCAATGGGTAAAAGTTTTATGTTTAAATTGGTGTCGAAATTTATTCCCTTCTGCTTTTAGGTTAACTTTTCTATAAATGCAGAGGCTGTGCAGCGTGCTGCAACAATTGCTGAAGCAGAAGGCATAAGCAGAATTGAAGCCACTCATTTGGAGAGAGTTCTTCCACAGTTACTGCTGGATTTTTGA

mRNA sequence

ATGGAAGAAATCGCATTCGATCTTGATCTGATTCACGCCATCTTCAAGCTCGAGTGGAGCAGAAGATCACTTGAGCGCGAGAAAAACGAGAGTTCTGATGCTATGGATTGCGAGGTTGAGGCTGGAACATCCAAGAAGGGCAGACCAATGTCAGCCAATGCAAATGCACTTAAATTGAGCTCTAAACTTCTACAGATTTTTGTCTCAGAGGCTGTGCAGCGTGCTGCAACAATTGCTGAAGCAGAAGGCATAAGCAGAATTGAAGCCACTCATTTGGAGAGAGTTCTTCCACAGTTACTGCTGGATTTTTGA

Coding sequence (CDS)

ATGGAAGAAATCGCATTCGATCTTGATCTGATTCACGCCATCTTCAAGCTCGAGTGGAGCAGAAGATCACTTGAGCGCGAGAAAAACGAGAGTTCTGATGCTATGGATTGCGAGGTTGAGGCTGGAACATCCAAGAAGGGCAGACCAATGTCAGCCAATGCAAATGCACTTAAATTGAGCTCTAAACTTCTACAGATTTTTGTCTCAGAGGCTGTGCAGCGTGCTGCAACAATTGCTGAAGCAGAAGGCATAAGCAGAATTGAAGCCACTCATTTGGAGAGAGTTCTTCCACAGTTACTGCTGGATTTTTGA

Protein sequence

MEEIAFDLDLIHAIFKLEWSRRSLEREKNESSDAMDCEVEAGTSKKGRPMSANANALKLSSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQLLLDF

Homology

[Close]

BLAST of Sed0026647 vs. NCBI nr
Match: XP_022135388.1 (protein MHF2 homolog [Momordica charantia])

HSP 1 Score: 184.1 bits (466), Expect = 6.0e-43
Identity = 97/103 (94.17%), Postives = 100/103 (97.09%), Query Frame = 0


Query: 1   MEEIAFDLDLIHAIFKLEWSRRSLEREKNESSDAMDCEVEAGTSKKGRPMSANANALKLS 60
           MEE AFD DLIHAIFKLEWSRRSLERE+NESSDAMDCEVEAGTSKK RPMSANANALKLS
Sbjct: 1   MEESAFDHDLIHAIFKLEWSRRSLERERNESSDAMDCEVEAGTSKKSRPMSANANALKLS 60

Query: 61  SKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQLLLDF 104
           SKLLQIF+SEAVQRAATIAEAEGISRIEATHLER+LPQLLLDF
Sbjct: 61  SKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF 103

[Close]

BLAST of Sed0026647 vs. NCBI nr
Match: XP_023516676.1 (protein MHF2 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 183.0 bits (463), Expect = 1.3e-42
Identity = 97/103 (94.17%), Postives = 99/103 (96.12%), Query Frame = 0


Query: 1   MEEIAFDLDLIHAIFKLEWSRRSLEREKNESSDAMDCEVEAGTSKKGRPMSANANALKLS 60
           MEE  FD DLIHAIFKLEWSRRSLEREKNESSDAMDCEV+AGTSKK RPMSANANALKLS
Sbjct: 1   MEESTFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLS 60

Query: 61  SKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQLLLDF 104
           SKLLQIFVSEAVQRAATIAEAEGISRIEATHLER+LPQLLLDF
Sbjct: 61  SKLLQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF 103

[Close]

BLAST of Sed0026647 vs. NCBI nr
Match: XP_022987126.1 (protein MHF2 homolog [Cucurbita maxima])

HSP 1 Score: 181.8 bits (460), Expect = 3.0e-42
Identity = 96/103 (93.20%), Postives = 99/103 (96.12%), Query Frame = 0


Query: 1   MEEIAFDLDLIHAIFKLEWSRRSLEREKNESSDAMDCEVEAGTSKKGRPMSANANALKLS 60
           MEE  FD DLIHAIFKLEW+RRSLEREKNESSDAMDCEV+AGTSKK RPMSANANALKLS
Sbjct: 1   MEESTFDPDLIHAIFKLEWTRRSLEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLS 60

Query: 61  SKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQLLLDF 104
           SKLLQIFVSEAVQRAATIAEAEGISRIEATHLER+LPQLLLDF
Sbjct: 61  SKLLQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF 103

[Close]

BLAST of Sed0026647 vs. NCBI nr
Match: XP_022921828.1 (protein MHF2 homolog [Cucurbita moschata])

HSP 1 Score: 181.8 bits (460), Expect = 3.0e-42
Identity = 96/103 (93.20%), Postives = 99/103 (96.12%), Query Frame = 0


Query: 1   MEEIAFDLDLIHAIFKLEWSRRSLEREKNESSDAMDCEVEAGTSKKGRPMSANANALKLS 60
           MEE  FD DLIHAIFKLEWSRRSLEREKNESSDAMDCEV+AGTSKK RPMSANANALKL+
Sbjct: 1   MEESTFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLT 60

Query: 61  SKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQLLLDF 104
           SKLLQIFVSEAVQRAATIAEAEGISRIEATHLER+LPQLLLDF
Sbjct: 61  SKLLQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF 103

[Close]

BLAST of Sed0026647 vs. NCBI nr
Match: KAG6589406.1 (Protein JINGUBANG, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 181.8 bits (460), Expect = 3.0e-42
Identity = 96/103 (93.20%), Postives = 99/103 (96.12%), Query Frame = 0


Query: 1   MEEIAFDLDLIHAIFKLEWSRRSLEREKNESSDAMDCEVEAGTSKKGRPMSANANALKLS 60
           MEE  FD DLIHAIFKLEWSRRSLEREKNESSDAMDCEV+AGTSKK RPMSANANALKL+
Sbjct: 335 MEESTFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLT 394

Query: 61  SKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQLLLDF 104
           SKLLQIFVSEAVQRAATIAEAEGISRIEATHLER+LPQLLLDF
Sbjct: 395 SKLLQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF 437

[Close]

BLAST of Sed0026647 vs. ExPASy Swiss-Prot
Match: Q8L7N3 (Protein MHF2 homolog OS=Arabidopsis thaliana OX=3702 GN=MHF2 PE=3 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 6.7e-29
Identity = 69/98 (70.41%), Postives = 81/98 (82.65%), Query Frame = 0


Query: 6   FDLDLIHAIFKLEWSRRSLEREKNESSDAMDCEVEAGTSKKGRPMSANANALKLSSKLLQ 65
           FD DLIHAIFK  W+RR  ERE++++ DA + EV  GT+KK R  SANANALKLS +LL+
Sbjct: 7   FDSDLIHAIFKHIWARRFRERERSDAIDATEAEVALGTTKKNRLASANANALKLSCELLK 66

Query: 66  IFVSEAVQRAATIAEAEGISRIEATHLERVLPQLLLDF 104
            FVSEAVQRAA IAEAEG+ +IEATHLER+LPQLLLDF
Sbjct: 67  SFVSEAVQRAAIIAEAEGMEKIEATHLERILPQLLLDF 104

[Close]

BLAST of Sed0026647 vs. ExPASy Swiss-Prot
Match: P0DJH7 (Centromere protein X OS=Gallus gallus OX=9031 GN=CENPX PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 7.3e-07
Identity = 27/51 (52.94%), Postives = 39/51 (76.47%), Query Frame = 0


Query: 53  NANALKLSSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQLLLDF 104
           N +AL L ++LL++FV EA  RAA  A+AE + +++  H+E+VLPQLLLDF
Sbjct: 29  NGDALLLMAELLKVFVREAAARAARQAQAEDLEKVDIEHVEKVLPQLLLDF 79

[Close]

BLAST of Sed0026647 vs. ExPASy Swiss-Prot
Match: Q2NKU0 (Centromere protein X OS=Bos taurus OX=9913 GN=CENPX PE=3 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 4.7e-06
Identity = 27/58 (46.55%), Postives = 41/58 (70.69%), Query Frame = 0


Query: 46  KGRPMSANANALKLSSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQLLLDF 104
           K +    + +AL+L ++LL+IFV EA  R+   A+AEG++ ++   LE+VLPQLLLDF
Sbjct: 22  KDKKTKVSGDALQLVAELLKIFVVEAAIRSVRQAQAEGLAHVDVEQLEKVLPQLLLDF 79

[Close]

BLAST of Sed0026647 vs. ExPASy Swiss-Prot
Match: A8MT69 (Centromere protein X OS=Homo sapiens OX=9606 GN=CENPX PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 2.0e-04
Identity = 25/51 (49.02%), Postives = 35/51 (68.63%), Query Frame = 0


Query: 53  NANALKLSSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQLLLDF 104
           + +AL+L  +LL++FV EA  R    A+AE   R++   LE+VLPQLLLDF
Sbjct: 31  SGDALQLMVELLKVFVVEAAVRGVRQAQAEDALRVDVDQLEKVLPQLLLDF 81

[Close]

BLAST of Sed0026647 vs. ExPASy Swiss-Prot
Match: Q5RBU1 (Centromere protein X OS=Pongo abelii OX=9601 GN=CENPX PE=3 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 2.0e-04
Identity = 25/51 (49.02%), Postives = 35/51 (68.63%), Query Frame = 0


Query: 53  NANALKLSSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQLLLDF 104
           + +AL+L  +LL++FV EA  R    A+AE   R++   LE+VLPQLLLDF
Sbjct: 31  SGDALQLMVELLKVFVVEAAVRGVRQAQAEDALRVDVDQLEKVLPQLLLDF 81

[Close]

BLAST of Sed0026647 vs. ExPASy TrEMBL
Match: A0A6J1C4N9 (protein MHF2 homolog OS=Momordica charantia OX=3673 GN=LOC111007351 PE=3 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.9e-43
Identity = 97/103 (94.17%), Postives = 100/103 (97.09%), Query Frame = 0


Query: 1   MEEIAFDLDLIHAIFKLEWSRRSLEREKNESSDAMDCEVEAGTSKKGRPMSANANALKLS 60
           MEE AFD DLIHAIFKLEWSRRSLERE+NESSDAMDCEVEAGTSKK RPMSANANALKLS
Sbjct: 1   MEESAFDHDLIHAIFKLEWSRRSLERERNESSDAMDCEVEAGTSKKSRPMSANANALKLS 60

Query: 61  SKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQLLLDF 104
           SKLLQIF+SEAVQRAATIAEAEGISRIEATHLER+LPQLLLDF
Sbjct: 61  SKLLQIFISEAVQRAATIAEAEGISRIEATHLERILPQLLLDF 103

[Close]

BLAST of Sed0026647 vs. ExPASy TrEMBL
Match: A0A6J1JD93 (protein MHF2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111484772 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.5e-42
Identity = 96/103 (93.20%), Postives = 99/103 (96.12%), Query Frame = 0


Query: 1   MEEIAFDLDLIHAIFKLEWSRRSLEREKNESSDAMDCEVEAGTSKKGRPMSANANALKLS 60
           MEE  FD DLIHAIFKLEW+RRSLEREKNESSDAMDCEV+AGTSKK RPMSANANALKLS
Sbjct: 1   MEESTFDPDLIHAIFKLEWTRRSLEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLS 60

Query: 61  SKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQLLLDF 104
           SKLLQIFVSEAVQRAATIAEAEGISRIEATHLER+LPQLLLDF
Sbjct: 61  SKLLQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF 103

[Close]

BLAST of Sed0026647 vs. ExPASy TrEMBL
Match: A0A6J1E4X1 (protein MHF2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111429969 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.5e-42
Identity = 96/103 (93.20%), Postives = 99/103 (96.12%), Query Frame = 0


Query: 1   MEEIAFDLDLIHAIFKLEWSRRSLEREKNESSDAMDCEVEAGTSKKGRPMSANANALKLS 60
           MEE  FD DLIHAIFKLEWSRRSLEREKNESSDAMDCEV+AGTSKK RPMSANANALKL+
Sbjct: 1   MEESTFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSKKSRPMSANANALKLT 60

Query: 61  SKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQLLLDF 104
           SKLLQIFVSEAVQRAATIAEAEGISRIEATHLER+LPQLLLDF
Sbjct: 61  SKLLQIFVSEAVQRAATIAEAEGISRIEATHLERILPQLLLDF 103

[Close]

BLAST of Sed0026647 vs. ExPASy TrEMBL
Match: A0A1S3CLK5 (centromere protein X isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502356 PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 2.2e-38
Identity = 91/105 (86.67%), Postives = 95/105 (90.48%), Query Frame = 0


Query: 1   MEEIAFDLDLIHAIFKLEWSRRSLEREKNESSDAMDCEVE--AGTSKKGRPMSANANALK 60
           MEE  F  DLIHAIFKLEWSRRSLEREKNE+ DAMDCEV+  AGTSKK RPMSANANALK
Sbjct: 1   MEETGFHPDLIHAIFKLEWSRRSLEREKNENPDAMDCEVDAGAGTSKKSRPMSANANALK 60

Query: 61  LSSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQLLLDF 104
           LSSKL+QIF+SEAVQRAATIAEAEGI RIE THLERVLPQLLLDF
Sbjct: 61  LSSKLVQIFISEAVQRAATIAEAEGIGRIEPTHLERVLPQLLLDF 105

[Close]

BLAST of Sed0026647 vs. ExPASy TrEMBL
Match: A0A0A0LU58 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G002850 PE=3 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.1e-37
Identity = 92/106 (86.79%), Postives = 97/106 (91.51%), Query Frame = 0


Query: 1   MEEIAFDLDLIHAIFKLEWSRRSLEREKNESS-DAMDCEVE--AGTSKKGRPMSANANAL 60
           MEE  F  DLIHAIFKLEWSRRSLEREKNE++ DAMDCEV+  AGTSKK RPMSANANAL
Sbjct: 72  MEETGFHPDLIHAIFKLEWSRRSLEREKNENNPDAMDCEVDAGAGTSKKSRPMSANANAL 131

Query: 61  KLSSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQLLLDF 104
           KLSSKL+QIF+SEAVQRAATIAEAEGISRIE THLERVLPQLLLDF
Sbjct: 132 KLSSKLVQIFISEAVQRAATIAEAEGISRIEPTHLERVLPQLLLDF 177

[Close]

BLAST of Sed0026647 vs. TAIR 10
Match: AT1G78790.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2008 (InterPro:IPR018552); Has 69 Blast hits to 69 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 127.9 bits (320), Expect = 4.8e-30
Identity = 69/98 (70.41%), Postives = 81/98 (82.65%), Query Frame = 0


Query: 6   FDLDLIHAIFKLEWSRRSLEREKNESSDAMDCEVEAGTSKKGRPMSANANALKLSSKLLQ 65
           FD DLIHAIFK  W+RR  ERE++++ DA + EV  GT+KK R  SANANALKLS +LL+
Sbjct: 7   FDSDLIHAIFKHIWARRFRERERSDAIDATEAEVALGTTKKNRLASANANALKLSCELLK 66

Query: 66  IFVSEAVQRAATIAEAEGISRIEATHLERVLPQLLLDF 104
            FVSEAVQRAA IAEAEG+ +IEATHLER+LPQLLLDF
Sbjct: 67  SFVSEAVQRAAIIAEAEGMEKIEATHLERILPQLLLDF 104

[Close]

BLAST of Sed0026647 vs. TAIR 10
Match: AT1G78790.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2008 (InterPro:IPR018552); Has 27 Blast hits to 27 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 95.5 bits (236), Expect = 2.6e-20
Identity = 55/98 (56.12%), Postives = 65/98 (66.33%), Query Frame = 0


Query: 6   FDLDLIHAIFKLEWSRRSLEREKNESSDAMDCEVEAGTSKKGRPMSANANALKLSSKLLQ 65
           FD DLIHAIFK  W+RR  ERE++++ DA + EV  GT+KK R                 
Sbjct: 7   FDSDLIHAIFKHIWARRFRERERSDAIDATEAEVALGTTKKNR----------------- 66

Query: 66  IFVSEAVQRAATIAEAEGISRIEATHLERVLPQLLLDF 104
              SEAVQRAA IAEAEG+ +IEATHLER+LPQLLLDF
Sbjct: 67  -LASEAVQRAAIIAEAEGMEKIEATHLERILPQLLLDF 86

The following BLAST results are available for this feature:

BLAST of Sed0026647 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135388.1	6.0e-43	94.17	protein MHF2 homolog [Momordica charantia]	[more]
XP_023516676.1	1.3e-42	94.17	protein MHF2 homolog [Cucurbita pepo subsp. pepo]	[more]
XP_022987126.1	3.0e-42	93.20	protein MHF2 homolog [Cucurbita maxima]	[more]
XP_022921828.1	3.0e-42	93.20	protein MHF2 homolog [Cucurbita moschata]	[more]
KAG6589406.1	3.0e-42	93.20	Protein JINGUBANG, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Sed0026647 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L7N3	6.7e-29	70.41	Protein MHF2 homolog OS=Arabidopsis thaliana OX=3702 GN=MHF2 PE=3 SV=1	[more]
P0DJH7	7.3e-07	52.94	Centromere protein X OS=Gallus gallus OX=9031 GN=CENPX PE=1 SV=1	[more]
Q2NKU0	4.7e-06	46.55	Centromere protein X OS=Bos taurus OX=9913 GN=CENPX PE=3 SV=1	[more]
A8MT69	2.0e-04	49.02	Centromere protein X OS=Homo sapiens OX=9606 GN=CENPX PE=1 SV=1	[more]
Q5RBU1	2.0e-04	49.02	Centromere protein X OS=Pongo abelii OX=9601 GN=CENPX PE=3 SV=1	[more]

BLAST of Sed0026647 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C4N9	2.9e-43	94.17	protein MHF2 homolog OS=Momordica charantia OX=3673 GN=LOC111007351 PE=3 SV=1	[more]
A0A6J1JD93	1.5e-42	93.20	protein MHF2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111484772 PE=3 SV=1	[more]
A0A6J1E4X1	1.5e-42	93.20	protein MHF2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111429969 PE=3 SV=1	[more]
A0A1S3CLK5	2.2e-38	86.67	centromere protein X isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502356 PE=3 SV=...	[more]
A0A0A0LU58	1.1e-37	86.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G002850 PE=3 SV=1	[more]

BLAST of Sed0026647 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G78790.1	4.8e-30	70.41	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2008...	[more]
AT1G78790.2	2.6e-20	56.12	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018552	Centromere protein X	PFAM	PF09415	CENP-X	coord: 51..103 e-value: 1.6E-15 score: 57.1
IPR018552	Centromere protein X	PANTHER	PTHR28680	CENTROMERE PROTEIN X	coord: 2..103
None	No IPR available	GENE3D	6.10.130.30		coord: 62..103 e-value: 3.0E-18 score: 67.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..50

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0026647.1	Sed0026647.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
biological_process	GO:0051382	kinetochore assembly
molecular_function	GO:0003677	DNA binding