Sed0026586 (gene) Chayote v1

Overview


Name	Sed0026586
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Ras-related protein Rab-2A
Location	LG08: 28911697 .. 28915354 (-)
RNA-Seq Expression	Sed0026586
Synteny	Sed0026586

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCAAATATGATTACCTCCTCAAGTTCATCGTCATTGGAGATTCAGGTATTCTTTATTTTGAGTTTTTTTTTTATTATTTTTTTTATTTTTTATATCTGAGACTATTCCGGCCAATTTATATGCAACTATTAATGTCACTAAATATACTGCATGACCCTATAATGTTTAAATATAAAAAAATAAGTAGGAATTTAATTTCTAATTAGGTGGACATCATGTATTGAACTCATAATCTCTTATACACTCTAAAACTTTCTTCATCACTAGGTCATTCTATGAGGGTCTTTTTTTATATATTTATTTTGAATTCAATAATTAATTAACGTCAGAATGTCATTTGAATTTTAAAATAGTAATTAATATCTTATCGATGATGTTGAATTTTATATATATTTTTTTTTACTTTGTGTGTTGTTTCTTGGTATAGGTGTGGGAAAATCTTGCTTAATGTTTCAATTTACTGACCAGAAGTTTCATCCGGTTCATAATGTCACTATCGGCACCGAGTTTGGAGCTCGTATGATCACCATCAATGGCCGACCTATTAAGCTTTACATATGGGATACGGTAAATTTCCCTTTTATTTAGTTTAAAATATAAATACTTTCTCGCCATCGCTATCGTATTCATTTAATGTGGGTTTTTTTTTATATCTATGACGGTTCGGGCTAGTTTGTGCACACTTTGACTAATGTTATAAGATATAACCCTACAACATCTGAATCTTAAAAAGATTTCTAAGAAATTAATTTATAGGTAGATGATCATCATAGATTGAATTTATCACCTTAAGCACCCCAAAACCTACTTTGATTATTTGAGTCACTCCATGATAGAGCCAGTCCATGATAGTTAGTGTGACACGACATAGTTAACTTAGTTTAGTTTTAGATTTTTAAGTTTGCCGTTGTTTTAAATATATCTAAATTTGTTAACCATTGGTGAACTTTTAATTTTGAAGTTTAATTAATTTTTTATCTTTAAAATACGTTATGGTATGTCTTTTGACATATTTGATATATATAAAGTGACTTTATTTAATAAATATGGTCTCTTACGGGCAGTAAAATGATTAATGATTGAGTGTTTAGGTTTTGGGGTATACTCTCTTAAAATATTAAGTTCAAGATATCACATTCTAGATAGTTAGTTGGTACCTTTGAATTTAGAAAAGAAAAACTTCAAATTCTCCAATTATTAAAAAAAAAAAAAAAATCTAATAGATACAAAGTTTAATAGATTCTTTGTTTAGTAGTTGAATAGTTCAAATACAAGTTAGAAAATTTTAGAATCTATTACACATCATTAAATTAAAAAATTTAAAGATTAACTTTAGATTTTTTATTAAAAAATTTCAAATACTAAAATAATATTCTACGCAATTGAAAACAGATTTTCTAACCTTAGTTATAATATATTTCTTATTTTTATTCATTTATGGATCAATCAAATATGTAAACGAATTATTTTGTATCAAATAAGATCTTAAACTTTTTTTTTGTAGGCTGGGCAAGAGAGATATAGATCAATTACAAGATCTTACTACAAAGGAGCAATTGGCTGTCTTTTAGTTTATGATGTAACCAAGTGAGTTAATTGATGAAATTTTATAATATTTCTACTTATATTTTATCATTAAATCTATGTGTTTAGCCAATTTCAACTAACTAAAGAAAGTTAGAGTCTTAGAGTTATGATTATAAGTGGTTTTTTTAGTTGGTAGTGTTTGGATAAAATTTAAAAGAATTTTTAATCGTGGTGTTGAATTTTAAAAAAAAATGCTGTCTTTTTTTTTTAACCCAAAAAAATACTGTAACCGAATAATTAAAAATACTACATTTTAAAATTTTGTAATTAAAATAGATATAAAATATTTAATTGTCTCCGCCTGCTTTTAAGGTGGGCTTTCTTTTCATATTGGAGATTCACGAGTTAAATTTAATTATAAAATTTCTTATTATTTTTCCTGAGTATATAAAAGCGAAAATTTGAATTTTGATCGTAAAAATGACATTTTAAGAGTTAAAAATTTAAACTTTTAAGGTAAGAAATTATTAAAATTTTAATATAGCATATGTTTTTTCTTTTTTGAATTCTATATCACTTTCAATATATTTACAATATTAGTTTATGATTGTATTAATAGAAGAGAGACATTCAATCACTTATTAGAATGGTTAGAGGAATGTCGAGAGCATGCAGATCCAAACATGTCGATTATGCTCGTAGGGAACAAGGCTGATCTTCAAGCTCGAAGTGTTGTAACAAGAGAAGAGGGACAACAATTTGCGAAACAAAACGGATTGTTATTCTTAGAAACATCAACTACAACGGCTCAAAATGTCGAAGAGGTTTTTTTTTTTTTAAAATTTTTGTTGAAACTTACGACATTAGTCAAATTCAAAAAATAATTATTATGATCACGTTTAAAAAAAATTAATAATCATGGTCATATATAGTAATAATGATACGGTATTAATAATATATAATACAGTAATAATACTCAATATTGTATTACTATATTATTAACAAATAATACTGTATTAATGAGTATTAATAATATAATAGAATCACATTTATGACTATAGATGCAAATGTTTTTAAATTTAACCATATTTGTAATTATTTGGTAATCACAAATTGTATTTGATTTTACAGGCTTTCATAAAGACTTCAGCTAAAATAATTCAAGATATTGAAGATGGTGTCATTGACTTGTCCAATATGGTAAGTTGCCCTTTTTTCTGTGTGTGCTAAAAATTGCAAGGATAAACTTATTGTTAATATTATCCAAGAGAAAAAAATATATTATCCAAGAGAAAAAAACTCACACTATTTAAAGAGAATGAAAAATAGTTGACCTAAGAAATAATGTCCACCTATGTCTTACAATATGGCGATATTCTATTTAATTTTAAACTCATAAAATAAACTAAAGAAAAATAGAATGTAGTCTATATTGAGTCACATATATGAACATTAATATTCAGGTCATACTAAAATATTTCTTTTTTTATGTAACTAAAAAAACCTATTTTTTTATATTAATAATATTACTAGATATGAGATTCAAATATGTAACCTCACATTGTAACAAGATGCTACTATAATTATAGTAATAATAATAATAATAATAATAATAATAATAATTTTGAAATCATTAGAATTATGTTTTTGTTGGTTTGGATGTAAATCTTTTATGATATAACAAAAGAATGTACAATCTTTTATTATGTTTTAATTTAGATAAGTTGTTGTTAGTAGCATATTCTAGTATTTTTTTTAAAAAAATTTGTTCACATATAGCAAAATTGATTGTTTTTTCTCCATTATTTTTTTTTAGGGTTAATTGTTTTCAATTAGTTTTACTGTATATATATTTTTTTTTGAGATATAGTTTTACTATATTAAAGTTATTAGTTTGTAATTTAAAATGTCTATTTCAATTTTTTGTTAAATTTAATTTTTTTTCCTAAAACTTTGACATCCATAAATTTCATTCATTCTTATTAATTAATTGAATTGTATTTAAATTTGACTGAATTAAAAGTTATTTGTTTTGGTTGAATATTGCAGCCCCTCGGAATCACAATTGGTGGTCGAGGAAAATCTGGAAAAGATGCGTGGAAAAGTAAATGTTGTGGTACATTTTGA

mRNA sequence

ATGTCCAAATATGATTACCTCCTCAAGTTCATCGTCATTGGAGATTCAGGTGTGGGAAAATCTTGCTTAATGTTTCAATTTACTGACCAGAAGTTTCATCCGGTTCATAATGTCACTATCGGCACCGAGTTTGGAGCTCGTATGATCACCATCAATGGCCGACCTATTAAGCTTTACATATGGGATACGGCTGGGCAAGAGAGATATAGATCAATTACAAGATCTTACTACAAAGGAGCAATTGGCTGTCTTTTAGTTTATGATGTAACCAAAAGAGAGACATTCAATCACTTATTAGAATGGTTAGAGGAATGTCGAGAGCATGCAGATCCAAACATGTCGATTATGCTCGTAGGGAACAAGGCTGATCTTCAAGCTCGAAGTGTTGTAACAAGAGAAGAGGGACAACAATTTGCGAAACAAAACGGATTGTTATTCTTAGAAACATCAACTACAACGGCTCAAAATGTCGAAGAGGCTTTCATAAAGACTTCAGCTAAAATAATTCAAGATATTGAAGATGGTGTCATTGACTTGTCCAATATGCCCCTCGGAATCACAATTGGTGGTCGAGGAAAATCTGGAAAAGATGCGTGGAAAAGTAAATGTTGTGGTACATTTTGA

Coding sequence (CDS)

ATGTCCAAATATGATTACCTCCTCAAGTTCATCGTCATTGGAGATTCAGGTGTGGGAAAATCTTGCTTAATGTTTCAATTTACTGACCAGAAGTTTCATCCGGTTCATAATGTCACTATCGGCACCGAGTTTGGAGCTCGTATGATCACCATCAATGGCCGACCTATTAAGCTTTACATATGGGATACGGCTGGGCAAGAGAGATATAGATCAATTACAAGATCTTACTACAAAGGAGCAATTGGCTGTCTTTTAGTTTATGATGTAACCAAAAGAGAGACATTCAATCACTTATTAGAATGGTTAGAGGAATGTCGAGAGCATGCAGATCCAAACATGTCGATTATGCTCGTAGGGAACAAGGCTGATCTTCAAGCTCGAAGTGTTGTAACAAGAGAAGAGGGACAACAATTTGCGAAACAAAACGGATTGTTATTCTTAGAAACATCAACTACAACGGCTCAAAATGTCGAAGAGGCTTTCATAAAGACTTCAGCTAAAATAATTCAAGATATTGAAGATGGTGTCATTGACTTGTCCAATATGCCCCTCGGAATCACAATTGGTGGTCGAGGAAAATCTGGAAAAGATGCGTGGAAAAGTAAATGTTGTGGTACATTTTGA

Protein sequence

MSKYDYLLKFIVIGDSGVGKSCLMFQFTDQKFHPVHNVTIGTEFGARMITINGRPIKLYIWDTAGQERYRSITRSYYKGAIGCLLVYDVTKRETFNHLLEWLEECREHADPNMSIMLVGNKADLQARSVVTREEGQQFAKQNGLLFLETSTTTAQNVEEAFIKTSAKIIQDIEDGVIDLSNMPLGITIGGRGKSGKDAWKSKCCGTF

Homology

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BLAST of Sed0026586 vs. NCBI nr
Match: XP_007215965.1 (ras-related protein RABB1b [Prunus persica] >ONI19755.1 hypothetical protein PRUPE_3G295400 [Prunus persica])

HSP 1 Score: 299.7 bits (766), Expect = 2.0e-77
Identity = 140/208 (67.31%), Postives = 173/208 (83.17%), Query Frame = 0


Query: 4   YDYLLKFIVIGDSGVGKSCLMFQFTDQKFHPVHNVTIGTEFGARMITINGRPIKLYIWDT 63
           YDYL K+I+IGD+GVGKSCL+ QFTD++F PVH++TIG EFGARM+TI+GRP+KL IWDT
Sbjct: 3   YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDT 62

Query: 64  AGQERYRSITRSYYKGAIGCLLVYDVTKRETFNHLLEWLEECREHADPNMSIMLVGNKAD 123
           AGQE +RSITRSYY+GA G LLVYD+T+RETFNHL  WLE+ R+HA+PNM+IML+GNK+D
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKSD 122

Query: 124 LQARSVVTREEGQQFAKQNGLLFLETSTTTAQNVEEAFIKTSAKIIQDIEDGVIDLSNMP 183
           L  R  V++EEG+QFAK+NGLLFLE S  TAQNVEEAFIKT+AKI+Q+I+DGV D+SN  
Sbjct: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSNES 182

Query: 184 LGITIG-GR-----GKSGKDAWKSKCCG 206
            GI +G GR     G +G  A +  CCG
Sbjct: 183 SGIKVGYGRPQGPSGSNGAVAQRGGCCG 210

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BLAST of Sed0026586 vs. NCBI nr
Match: XP_038894253.1 (ras-related protein RABB1b [Benincasa hispida])

HSP 1 Score: 298.9 bits (764), Expect = 3.4e-77
Identity = 142/209 (67.94%), Postives = 172/209 (82.30%), Query Frame = 0


Query: 4   YDYLLKFIVIGDSGVGKSCLMFQFTDQKFHPVHNVTIGTEFGARMITINGRPIKLYIWDT 63
           YDYL K+I+IGD+GVGKSCL+ QFTD++F PVH++TIG EFGARM+TI+GRPIKL IWDT
Sbjct: 3   YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62

Query: 64  AGQERYRSITRSYYKGAIGCLLVYDVTKRETFNHLLEWLEECREHADPNMSIMLVGNKAD 123
           AGQE +RSITRSYY+GA G LLVYD+T+RETFNHL  WLE+ R+HA+PNMSIMLVGNKAD
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNKAD 122

Query: 124 LQARSVVTREEGQQFAKQNGLLFLETSTTTAQNVEEAFIKTSAKIIQDIEDGVIDLSNMP 183
           L  R  V++EEG+QFAK+NGLLFLE S  TAQNVEEAFIKT+AKI+Q+I++GV D+SN  
Sbjct: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNES 182

Query: 184 LGITIG-GR------GKSGKDAWKSKCCG 206
            GI +G GR       + G  A +  CCG
Sbjct: 183 SGIKVGYGRPQGPSGARDGTVAQRGGCCG 211

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BLAST of Sed0026586 vs. NCBI nr
Match: XP_008450002.1 (PREDICTED: ras-related protein RABB1b [Cucumis melo] >KAA0037848.1 ras-related protein RABB1b [Cucumis melo var. makuwa] >TYK27226.1 ras-related protein RABB1b [Cucumis melo var. makuwa])

HSP 1 Score: 298.9 bits (764), Expect = 3.4e-77
Identity = 142/209 (67.94%), Postives = 172/209 (82.30%), Query Frame = 0


Query: 4   YDYLLKFIVIGDSGVGKSCLMFQFTDQKFHPVHNVTIGTEFGARMITINGRPIKLYIWDT 63
           YDYL K+I+IGD+GVGKSCL+ QFTD++F PVH++TIG EFGARM+TI+GRPIKL IWDT
Sbjct: 3   YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62

Query: 64  AGQERYRSITRSYYKGAIGCLLVYDVTKRETFNHLLEWLEECREHADPNMSIMLVGNKAD 123
           AGQE +RSITRSYY+GA G LLVYD+T+RETFNHL  WLE+ R+HA+PNMSIMLVGNKAD
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNKAD 122

Query: 124 LQARSVVTREEGQQFAKQNGLLFLETSTTTAQNVEEAFIKTSAKIIQDIEDGVIDLSNMP 183
           L  R  V++EEG+QFAK+NGLLFLE S  TAQNVEEAFIKT+AKI+Q+I++GV D+SN  
Sbjct: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNES 182

Query: 184 LGITIG-GR------GKSGKDAWKSKCCG 206
            GI +G GR       + G  A +  CCG
Sbjct: 183 SGIKVGYGRPQGPSGARDGAVAQRGGCCG 211

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BLAST of Sed0026586 vs. NCBI nr
Match: XP_039066725.1 (ras-related protein RABB1b [Hibiscus syriacus] >KAE8718481.1 GTP-binding protein yptV4 [Hibiscus syriacus])

HSP 1 Score: 298.5 bits (763), Expect = 4.4e-77
Identity = 142/209 (67.94%), Postives = 171/209 (81.82%), Query Frame = 0


Query: 4   YDYLLKFIVIGDSGVGKSCLMFQFTDQKFHPVHNVTIGTEFGARMITINGRPIKLYIWDT 63
           YDYL K+I+IGD+GVGKSCL+ QFTD++F PVH++TIG EFGARM+TI+GRP+KL IWDT
Sbjct: 3   YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDT 62

Query: 64  AGQERYRSITRSYYKGAIGCLLVYDVTKRETFNHLLEWLEECREHADPNMSIMLVGNKAD 123
           AGQE +RSITRSYY+GA G LLVYD+T+RETFNHL  WLE+ R+HA+PNM+IMLVGNK+D
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLVGNKSD 122

Query: 124 LQARSVVTREEGQQFAKQNGLLFLETSTTTAQNVEEAFIKTSAKIIQDIEDGVIDLSNMP 183
           L  R  V++EEG+QFAK+NGLLFLE S  TAQNVEEAFIKT+AKI+Q+I+DGV D SN  
Sbjct: 123 LSHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDASNES 182

Query: 184 LGITIG-GR------GKSGKDAWKSKCCG 206
            GI IG GR       + G  A  S CCG
Sbjct: 183 SGIKIGYGRAQGPSGARDGAVAQSSGCCG 211

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BLAST of Sed0026586 vs. NCBI nr
Match: XP_008230491.1 (PREDICTED: ras-related protein RABB1b [Prunus mume] >XP_021813025.1 ras-related protein RABB1b [Prunus avium] >XP_034207370.1 ras-related protein RABB1b [Prunus dulcis] >CAB4275345.1 unnamed protein product [Prunus armeniaca] >CAB4305703.1 unnamed protein product [Prunus armeniaca] >VVA17824.1 PREDICTED: ras-related [Prunus dulcis])

HSP 1 Score: 298.1 bits (762), Expect = 5.8e-77
Identity = 139/207 (67.15%), Postives = 172/207 (83.09%), Query Frame = 0


Query: 4   YDYLLKFIVIGDSGVGKSCLMFQFTDQKFHPVHNVTIGTEFGARMITINGRPIKLYIWDT 63
           YDYL K+I+IGD+GVGKSCL+ QFTD++F PVH++TIG EFGARM+TI+GRP+KL IWDT
Sbjct: 3   YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDT 62

Query: 64  AGQERYRSITRSYYKGAIGCLLVYDVTKRETFNHLLEWLEECREHADPNMSIMLVGNKAD 123
           AGQE +RSITRSYY+GA G LLVYD+T+RETFNHL  WLE+ R+HA+PNM+IML+GNK+D
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKSD 122

Query: 124 LQARSVVTREEGQQFAKQNGLLFLETSTTTAQNVEEAFIKTSAKIIQDIEDGVIDLSNMP 183
           L  R  V++EEG+QFAK+NGLLFLE S  TAQNVEEAFIKT+AKI+Q+I+DGV D+SN  
Sbjct: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSNES 182

Query: 184 LGITIG-GR-----GKSGKDAWKSKCC 205
            GI +G GR     G +G  A +  CC
Sbjct: 183 SGIKVGYGRPQGPSGSNGAVAQRGGCC 209

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BLAST of Sed0026586 vs. ExPASy Swiss-Prot
Match: Q38922 (Ras-related protein RABB1b OS=Arabidopsis thaliana OX=3702 GN=RABB1B PE=2 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 8.4e-79
Identity = 139/209 (66.51%), Postives = 171/209 (81.82%), Query Frame = 0


Query: 4   YDYLLKFIVIGDSGVGKSCLMFQFTDQKFHPVHNVTIGTEFGARMITINGRPIKLYIWDT 63
           YDYL K+I+IGD+GVGKSCL+ QFTD++F PVH++TIG EFGARM+T++GRPIKL IWDT
Sbjct: 3   YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIWDT 62

Query: 64  AGQERYRSITRSYYKGAIGCLLVYDVTKRETFNHLLEWLEECREHADPNMSIMLVGNKAD 123
           AGQE +RSITRSYY+GA G LLVYD+T+RETFNHL  WLE+ R+HA+PNMSIML+GNK D
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNKCD 122

Query: 124 LQARSVVTREEGQQFAKQNGLLFLETSTTTAQNVEEAFIKTSAKIIQDIEDGVIDLSNMP 183
           L  +  V++EEGQQFAK++GLLFLE S  TAQNVEEAFI+T+AKI+Q+I+DGV D+SN  
Sbjct: 123 LAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQNIQDGVFDVSNES 182

Query: 184 LGITIG-GR------GKSGKDAWKSKCCG 206
            GI IG GR      G+ G  +    CCG
Sbjct: 183 SGIKIGYGRTQGAAGGRDGTISQGGGCCG 211

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BLAST of Sed0026586 vs. ExPASy Swiss-Prot
Match: P36863 (GTP-binding protein yptV4 OS=Volvox carteri OX=3067 GN=YPTV4 PE=3 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 4.8e-74
Identity = 133/211 (63.03%), Postives = 163/211 (77.25%), Query Frame = 0


Query: 4   YDYLLKFIVIGDSGVGKSCLMFQFTDQKFHPVHNVTIGTEFGARMITINGRPIKLYIWDT 63
           Y YL K+I+IGD+GVGKSCL+ QFTD++F PVH++TIG EFGARMI I+G+ IKL IWDT
Sbjct: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDT 62

Query: 64  AGQERYRSITRSYYKGAIGCLLVYDVTKRETFNHLLEWLEECREHADPNMSIMLVGNKAD 123
           AGQE +RSITRSYY+GA G LLVYD+T+RETFNHL  WLE+ R+HA+PNM+IML+GNK D
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCD 122

Query: 124 LQARSVVTREEGQQFAKQNGLLFLETSTTTAQNVEEAFIKTSAKIIQDIEDGVIDLSNMP 183
           L  R  VT EEG+QFAK++GL+FLETS  TA NVEEAFI T+ +I + I+DGV D+SN  
Sbjct: 123 LTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSNES 182

Query: 184 LGITIG-GRGKSGKDAWK---------SKCC 205
            GI +G G G +G  A K         S CC
Sbjct: 183 YGIKVGYGAGNAGPQAAKPGEGDARKSSSCC 213

[Close]

BLAST of Sed0026586 vs. ExPASy Swiss-Prot
Match: P92963 (Ras-related protein RABB1c OS=Arabidopsis thaliana OX=3702 GN=RABB1C PE=1 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 8.1e-74
Identity = 130/209 (62.20%), Postives = 162/209 (77.51%), Query Frame = 0


Query: 4   YDYLLKFIVIGDSGVGKSCLMFQFTDQKFHPVHNVTIGTEFGARMITINGRPIKLYIWDT 63
           Y YL K+I+IGD+GVGKSCL+ QFTD++F PVH++TIG EFGARMITI+ +PIKL IWDT
Sbjct: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62

Query: 64  AGQERYRSITRSYYKGAIGCLLVYDVTKRETFNHLLEWLEECREHADPNMSIMLVGNKAD 123
           AGQE +RSITRSYY+GA G LLVYD+T+RETFNHL  WLE+ R+HA+ NM+IML+GNK D
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122

Query: 124 LQARSVVTREEGQQFAKQNGLLFLETSTTTAQNVEEAFIKTSAKIIQDIEDGVIDLSNMP 183
           L  R  V+ EEG+QFAK++GL+F+E S  TAQNVEEAFIKT+A I + I+DGV D+SN  
Sbjct: 123 LAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNES 182

Query: 184 LGITIG-------GRGKSGKDAWKSKCCG 206
            GI +G         G+ G  +    CCG
Sbjct: 183 YGIKVGYGGIPGPSGGRDGSTSQGGGCCG 211

[Close]

BLAST of Sed0026586 vs. ExPASy Swiss-Prot
Match: Q39570 (GTP-binding protein YPTC4 OS=Chlamydomonas reinhardtii OX=3055 GN=YPTC4 PE=3 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 1.8e-73
Identity = 132/211 (62.56%), Postives = 162/211 (76.78%), Query Frame = 0


Query: 4   YDYLLKFIVIGDSGVGKSCLMFQFTDQKFHPVHNVTIGTEFGARMITINGRPIKLYIWDT 63
           Y YL K+I+IGD+GVGKSCL+ QFTD++F PVH++TIG EFGARMI I+G+ IKL IWDT
Sbjct: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDT 62

Query: 64  AGQERYRSITRSYYKGAIGCLLVYDVTKRETFNHLLEWLEECREHADPNMSIMLVGNKAD 123
           AGQE +RSITRSYY+GA G LLVYD+T+RETFNHL  WLE+ R+HA+PNM+IML+GNK D
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCD 122

Query: 124 LQARSVVTREEGQQFAKQNGLLFLETSTTTAQNVEEAFIKTSAKIIQDIEDGVIDLSNMP 183
           L  R  VT EEG+QFAK++GL+FLETS  TA NVEEAFI T+ +I + I+DGV D+SN  
Sbjct: 123 LTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSNES 182

Query: 184 LGITIG-GRGKSGKDAWK---------SKCC 205
            GI +G G G +G    K         S CC
Sbjct: 183 YGIKVGYGGGNAGPQTVKPGEGGAAKSSSCC 213

[Close]

BLAST of Sed0026586 vs. ExPASy Swiss-Prot
Match: P49103 (Ras-related protein Rab-2-A OS=Zea mays OX=4577 GN=RAB2A PE=2 SV=2)

HSP 1 Score: 274.6 bits (701), Expect = 9.0e-73
Identity = 128/206 (62.14%), Postives = 160/206 (77.67%), Query Frame = 0


Query: 4   YDYLLKFIVIGDSGVGKSCLMFQFTDQKFHPVHNVTIGTEFGARMITINGRPIKLYIWDT 63
           Y YL K+I+IGD+GVGKSCL+ QFTD++F PVH++TIG EFGARMITI+ +PIKL IWDT
Sbjct: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62

Query: 64  AGQERYRSITRSYYKGAIGCLLVYDVTKRETFNHLLEWLEECREHADPNMSIMLVGNKAD 123
           AGQE +RSITRSYY+GA G LLVYD+T+RETFNHL  WLE+ R+HA+ NM+IMLVGNK D
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNKCD 122

Query: 124 LQARSVVTREEGQQFAKQNGLLFLETSTTTAQNVEEAFIKTSAKIIQDIEDGVIDLSNMP 183
           L  R  V+ EEG+QFAK++GL+F+E S  TAQNVEEAF+KT+  I + I+DGV D+SN  
Sbjct: 123 LSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSNES 182

Query: 184 LGITI-----GGRGKSGKDAWKSKCC 205
            GI +     G  G +G  +    CC
Sbjct: 183 YGIKVGYVVPGQSGGAGSSSQGGGCC 208

[Close]

BLAST of Sed0026586 vs. ExPASy TrEMBL
Match: M5WU03 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G295400 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 9.6e-78
Identity = 140/208 (67.31%), Postives = 173/208 (83.17%), Query Frame = 0


Query: 4   YDYLLKFIVIGDSGVGKSCLMFQFTDQKFHPVHNVTIGTEFGARMITINGRPIKLYIWDT 63
           YDYL K+I+IGD+GVGKSCL+ QFTD++F PVH++TIG EFGARM+TI+GRP+KL IWDT
Sbjct: 3   YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDT 62

Query: 64  AGQERYRSITRSYYKGAIGCLLVYDVTKRETFNHLLEWLEECREHADPNMSIMLVGNKAD 123
           AGQE +RSITRSYY+GA G LLVYD+T+RETFNHL  WLE+ R+HA+PNM+IML+GNK+D
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKSD 122

Query: 124 LQARSVVTREEGQQFAKQNGLLFLETSTTTAQNVEEAFIKTSAKIIQDIEDGVIDLSNMP 183
           L  R  V++EEG+QFAK+NGLLFLE S  TAQNVEEAFIKT+AKI+Q+I+DGV D+SN  
Sbjct: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSNES 182

Query: 184 LGITIG-GR-----GKSGKDAWKSKCCG 206
            GI +G GR     G +G  A +  CCG
Sbjct: 183 SGIKVGYGRPQGPSGSNGAVAQRGGCCG 210

[Close]

BLAST of Sed0026586 vs. ExPASy TrEMBL
Match: A0A5A7T4U5 (Ras-related protein RABB1b OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold236G001040 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.6e-77
Identity = 142/209 (67.94%), Postives = 172/209 (82.30%), Query Frame = 0


Query: 4   YDYLLKFIVIGDSGVGKSCLMFQFTDQKFHPVHNVTIGTEFGARMITINGRPIKLYIWDT 63
           YDYL K+I+IGD+GVGKSCL+ QFTD++F PVH++TIG EFGARM+TI+GRPIKL IWDT
Sbjct: 3   YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62

Query: 64  AGQERYRSITRSYYKGAIGCLLVYDVTKRETFNHLLEWLEECREHADPNMSIMLVGNKAD 123
           AGQE +RSITRSYY+GA G LLVYD+T+RETFNHL  WLE+ R+HA+PNMSIMLVGNKAD
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNKAD 122

Query: 124 LQARSVVTREEGQQFAKQNGLLFLETSTTTAQNVEEAFIKTSAKIIQDIEDGVIDLSNMP 183
           L  R  V++EEG+QFAK+NGLLFLE S  TAQNVEEAFIKT+AKI+Q+I++GV D+SN  
Sbjct: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNES 182

Query: 184 LGITIG-GR------GKSGKDAWKSKCCG 206
            GI +G GR       + G  A +  CCG
Sbjct: 183 SGIKVGYGRPQGPSGARDGAVAQRGGCCG 211

[Close]

BLAST of Sed0026586 vs. ExPASy TrEMBL
Match: A0A1S3BMP4 (ras-related protein RABB1b OS=Cucumis melo OX=3656 GN=LOC103491719 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.6e-77
Identity = 142/209 (67.94%), Postives = 172/209 (82.30%), Query Frame = 0


Query: 4   YDYLLKFIVIGDSGVGKSCLMFQFTDQKFHPVHNVTIGTEFGARMITINGRPIKLYIWDT 63
           YDYL K+I+IGD+GVGKSCL+ QFTD++F PVH++TIG EFGARM+TI+GRPIKL IWDT
Sbjct: 3   YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62

Query: 64  AGQERYRSITRSYYKGAIGCLLVYDVTKRETFNHLLEWLEECREHADPNMSIMLVGNKAD 123
           AGQE +RSITRSYY+GA G LLVYD+T+RETFNHL  WLE+ R+HA+PNMSIMLVGNKAD
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNKAD 122

Query: 124 LQARSVVTREEGQQFAKQNGLLFLETSTTTAQNVEEAFIKTSAKIIQDIEDGVIDLSNMP 183
           L  R  V++EEG+QFAK+NGLLFLE S  TAQNVEEAFIKT+AKI+Q+I++GV D+SN  
Sbjct: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNES 182

Query: 184 LGITIG-GR------GKSGKDAWKSKCCG 206
            GI +G GR       + G  A +  CCG
Sbjct: 183 SGIKVGYGRPQGPSGARDGAVAQRGGCCG 211

[Close]

BLAST of Sed0026586 vs. ExPASy TrEMBL
Match: A0A6A3BRG0 (GTP-binding protein yptV4 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110013pilonHSYRG00325 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 2.1e-77
Identity = 142/209 (67.94%), Postives = 171/209 (81.82%), Query Frame = 0


Query: 4   YDYLLKFIVIGDSGVGKSCLMFQFTDQKFHPVHNVTIGTEFGARMITINGRPIKLYIWDT 63
           YDYL K+I+IGD+GVGKSCL+ QFTD++F PVH++TIG EFGARM+TI+GRP+KL IWDT
Sbjct: 3   YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDT 62

Query: 64  AGQERYRSITRSYYKGAIGCLLVYDVTKRETFNHLLEWLEECREHADPNMSIMLVGNKAD 123
           AGQE +RSITRSYY+GA G LLVYD+T+RETFNHL  WLE+ R+HA+PNM+IMLVGNK+D
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLVGNKSD 122

Query: 124 LQARSVVTREEGQQFAKQNGLLFLETSTTTAQNVEEAFIKTSAKIIQDIEDGVIDLSNMP 183
           L  R  V++EEG+QFAK+NGLLFLE S  TAQNVEEAFIKT+AKI+Q+I+DGV D SN  
Sbjct: 123 LSHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDASNES 182

Query: 184 LGITIG-GR------GKSGKDAWKSKCCG 206
            GI IG GR       + G  A  S CCG
Sbjct: 183 SGIKIGYGRAQGPSGARDGAVAQSSGCCG 211

[Close]

BLAST of Sed0026586 vs. ExPASy TrEMBL
Match: A0A6J5UJH0 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS24175 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.8e-77
Identity = 139/207 (67.15%), Postives = 172/207 (83.09%), Query Frame = 0


Query: 4   YDYLLKFIVIGDSGVGKSCLMFQFTDQKFHPVHNVTIGTEFGARMITINGRPIKLYIWDT 63
           YDYL K+I+IGD+GVGKSCL+ QFTD++F PVH++TIG EFGARM+TI+GRP+KL IWDT
Sbjct: 3   YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDT 62

Query: 64  AGQERYRSITRSYYKGAIGCLLVYDVTKRETFNHLLEWLEECREHADPNMSIMLVGNKAD 123
           AGQE +RSITRSYY+GA G LLVYD+T+RETFNHL  WLE+ R+HA+PNM+IML+GNK+D
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKSD 122

Query: 124 LQARSVVTREEGQQFAKQNGLLFLETSTTTAQNVEEAFIKTSAKIIQDIEDGVIDLSNMP 183
           L  R  V++EEG+QFAK+NGLLFLE S  TAQNVEEAFIKT+AKI+Q+I+DGV D+SN  
Sbjct: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSNES 182

Query: 184 LGITIG-GR-----GKSGKDAWKSKCC 205
            GI +G GR     G +G  A +  CC
Sbjct: 183 SGIKVGYGRPQGPSGSNGAVAQRGGCC 209

[Close]

BLAST of Sed0026586 vs. TAIR 10
Match: AT4G35860.1 (GTP-binding 2 )

HSP 1 Score: 294.7 bits (753), Expect = 5.9e-80
Identity = 139/209 (66.51%), Postives = 171/209 (81.82%), Query Frame = 0


Query: 4   YDYLLKFIVIGDSGVGKSCLMFQFTDQKFHPVHNVTIGTEFGARMITINGRPIKLYIWDT 63
           YDYL K+I+IGD+GVGKSCL+ QFTD++F PVH++TIG EFGARM+T++GRPIKL IWDT
Sbjct: 3   YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIWDT 62

Query: 64  AGQERYRSITRSYYKGAIGCLLVYDVTKRETFNHLLEWLEECREHADPNMSIMLVGNKAD 123
           AGQE +RSITRSYY+GA G LLVYD+T+RETFNHL  WLE+ R+HA+PNMSIML+GNK D
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNKCD 122

Query: 124 LQARSVVTREEGQQFAKQNGLLFLETSTTTAQNVEEAFIKTSAKIIQDIEDGVIDLSNMP 183
           L  +  V++EEGQQFAK++GLLFLE S  TAQNVEEAFI+T+AKI+Q+I+DGV D+SN  
Sbjct: 123 LAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQNIQDGVFDVSNES 182

Query: 184 LGITIG-GR------GKSGKDAWKSKCCG 206
            GI IG GR      G+ G  +    CCG
Sbjct: 183 SGIKIGYGRTQGAAGGRDGTISQGGGCCG 211

[Close]

BLAST of Sed0026586 vs. TAIR 10
Match: AT4G17170.1 (RAB GTPase homolog B1C )

HSP 1 Score: 278.1 bits (710), Expect = 5.8e-75
Identity = 130/209 (62.20%), Postives = 162/209 (77.51%), Query Frame = 0


Query: 4   YDYLLKFIVIGDSGVGKSCLMFQFTDQKFHPVHNVTIGTEFGARMITINGRPIKLYIWDT 63
           Y YL K+I+IGD+GVGKSCL+ QFTD++F PVH++TIG EFGARMITI+ +PIKL IWDT
Sbjct: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62

Query: 64  AGQERYRSITRSYYKGAIGCLLVYDVTKRETFNHLLEWLEECREHADPNMSIMLVGNKAD 123
           AGQE +RSITRSYY+GA G LLVYD+T+RETFNHL  WLE+ R+HA+ NM+IML+GNK D
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122

Query: 124 LQARSVVTREEGQQFAKQNGLLFLETSTTTAQNVEEAFIKTSAKIIQDIEDGVIDLSNMP 183
           L  R  V+ EEG+QFAK++GL+F+E S  TAQNVEEAFIKT+A I + I+DGV D+SN  
Sbjct: 123 LAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNES 182

Query: 184 LGITIG-------GRGKSGKDAWKSKCCG 206
            GI +G         G+ G  +    CCG
Sbjct: 183 YGIKVGYGGIPGPSGGRDGSTSQGGGCCG 211

[Close]

BLAST of Sed0026586 vs. TAIR 10
Match: AT4G17160.1 (RAB GTPase homolog B1A )

HSP 1 Score: 258.8 bits (660), Expect = 3.6e-69
Identity = 123/206 (59.71%), Postives = 160/206 (77.67%), Query Frame = 0


Query: 4   YDYLLKFIVIGDSGVGKSCLMFQFTDQKFHPVHNVTIGTEFGARMITINGRPIKLYIWDT 63
           Y Y  K+I+IGD+GVGKSCL+ +FTD++F  VH++TIG EFGA+ ITI+ +PIKL IWDT
Sbjct: 3   YAYRFKYIIIGDTGVGKSCLLLKFTDKRFQAVHDLTIGVEFGAKTITIDNKPIKLQIWDT 62

Query: 64  AGQERYRSITRSYYKGAIGCLLVYDVTKRETFNHLLEWLEECREHADPNMSIMLVGNKAD 123
           AGQE +RS+TRSYY+G  G LLVYD+T+RETFNHL  WLEE R+HA  NM+ ML+GNK D
Sbjct: 63  AGQESFRSVTRSYYRGRAGTLLVYDITRRETFNHLASWLEEARQHASENMTTMLIGNKCD 122

Query: 124 LQARSVVTREEGQQFAKQNGLLFLETSTTTAQNVEEAFIKTSAKIIQDIEDGVIDLSNMP 183
           L+ +  V+ EEG+QFA+++GL+F+E S  TA NVEEAF++T+A I + I+DGV+D +N P
Sbjct: 123 LEDKRTVSTEEGEQFAREHGLIFMEASAKTAHNVEEAFVETAATIYKRIQDGVVDEANEP 182

Query: 184 LGITIGGRGKSGKDAWKSK----CCG 206
            GIT G  G  GKDA  S+    CCG
Sbjct: 183 -GITPGPFG--GKDASSSQQRRGCCG 205

[Close]

BLAST of Sed0026586 vs. TAIR 10
Match: AT4G35860.2 (GTP-binding 2 )

HSP 1 Score: 219.5 bits (558), Expect = 2.4e-57
Identity = 107/165 (64.85%), Postives = 131/165 (79.39%), Query Frame = 0


Query: 48  MITINGRPIKLYIWDTAGQERYRSITRSYYKGAIGCLLVYDVTKRETFNHLLEWLEECRE 107
           M+T++GRPIKL IWDTAGQE +RSITRSYY+GA G LLVYD+T+RETFNHL  WLE+ R+
Sbjct: 1   MVTVDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60

Query: 108 HADPNMSIMLVGNKADLQARSVVTREEGQQFAKQNGLLFLETSTTTAQNVEEAFIKTSAK 167
           HA+PNMSIML+GNK DL  +  V++EEGQQFAK++GLLFLE S  TAQNVEEAFI+T+AK
Sbjct: 61  HANPNMSIMLIGNKCDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAK 120

Query: 168 IIQDIEDGVIDLSNMPLGITIG-GR------GKSGKDAWKSKCCG 206
           I+Q+I+DGV D+SN   GI IG GR      G+ G  +    CCG
Sbjct: 121 ILQNIQDGVFDVSNESSGIKIGYGRTQGAAGGRDGTISQGGGCCG 165

[Close]

BLAST of Sed0026586 vs. TAIR 10
Match: AT5G59150.1 (RAB GTPase homolog A2D )

HSP 1 Score: 192.2 bits (487), Expect = 4.2e-49
Identity = 102/211 (48.34%), Postives = 132/211 (62.56%), Query Frame = 0


Query: 4   YDYLLKFIVIGDSGVGKSCLMFQFTDQKFHPVHNVTIGTEFGARMITINGRPIKLYIWDT 63
           YDYL K ++IGDSGVGK+ ++ +FT  +F      TIG EF  R + + G+ +K  IWDT
Sbjct: 9   YDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68

Query: 64  AGQERYRSITRSYYKGAIGCLLVYDVTKRETFNHLLEWLEECREHADPNMSIMLVGNKAD 123
           AGQERYR+IT +YY+GA+G LLVYD+TKR+TF+++L WL E R+HAD N+ IM+ GNKAD
Sbjct: 69  AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKAD 128

Query: 124 LQARSVVTREEGQQFAKQNGLLFLETSTTTAQNVEEAFIKTSAKIIQDI-------EDGV 183
           L     V  E+GQ  A+  GL FLETS   A NVE+AF    A+I   I       ++  
Sbjct: 129 LNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKKALAAQEAA 188

Query: 184 IDLSNMP-LGITIGGRGKSGKDAWKSKCCGT 207
              S +P  G TI     SG  A K  CC T
Sbjct: 189 AANSAIPGQGTTINVEDTSG--AGKRGCCST 217

The following BLAST results are available for this feature:

BLAST of Sed0026586 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_007215965.1	2.0e-77	67.31	ras-related protein RABB1b [Prunus persica] >ONI19755.1 hypothetical protein PRU...	[more]
XP_038894253.1	3.4e-77	67.94	ras-related protein RABB1b [Benincasa hispida]	[more]
XP_008450002.1	3.4e-77	67.94	PREDICTED: ras-related protein RABB1b [Cucumis melo] >KAA0037848.1 ras-related p...	[more]
XP_039066725.1	4.4e-77	67.94	ras-related protein RABB1b [Hibiscus syriacus] >KAE8718481.1 GTP-binding protein...	[more]
XP_008230491.1	5.8e-77	67.15	PREDICTED: ras-related protein RABB1b [Prunus mume] >XP_021813025.1 ras-related ...	[more]

BLAST of Sed0026586 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q38922	8.4e-79	66.51	Ras-related protein RABB1b OS=Arabidopsis thaliana OX=3702 GN=RABB1B PE=2 SV=1	[more]
P36863	4.8e-74	63.03	GTP-binding protein yptV4 OS=Volvox carteri OX=3067 GN=YPTV4 PE=3 SV=1	[more]
P92963	8.1e-74	62.20	Ras-related protein RABB1c OS=Arabidopsis thaliana OX=3702 GN=RABB1C PE=1 SV=1	[more]
Q39570	1.8e-73	62.56	GTP-binding protein YPTC4 OS=Chlamydomonas reinhardtii OX=3055 GN=YPTC4 PE=3 SV=...	[more]
P49103	9.0e-73	62.14	Ras-related protein Rab-2-A OS=Zea mays OX=4577 GN=RAB2A PE=2 SV=2	[more]

BLAST of Sed0026586 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
M5WU03	9.6e-78	67.31	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G295400 PE=4 SV=1	[more]
A0A5A7T4U5	1.6e-77	67.94	Ras-related protein RABB1b OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3BMP4	1.6e-77	67.94	ras-related protein RABB1b OS=Cucumis melo OX=3656 GN=LOC103491719 PE=4 SV=1	[more]
A0A6A3BRG0	2.1e-77	67.94	GTP-binding protein yptV4 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110013pil...	[more]
A0A6J5UJH0	2.8e-77	67.15	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS24175 PE=4 S...	[more]

BLAST of Sed0026586 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35860.1	5.9e-80	66.51	GTP-binding 2	[more]
AT4G17170.1	5.8e-75	62.20	RAB GTPase homolog B1C	[more]
AT4G17160.1	3.6e-69	59.71	RAB GTPase homolog B1A	[more]
AT4G35860.2	2.4e-57	64.85	GTP-binding 2	[more]
AT5G59150.1	4.2e-49	48.34	RAB GTPase homolog A2D	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 49..71 score: 51.9 coord: 8..29 score: 49.01 coord: 111..124 score: 53.66 coord: 146..168 score: 38.18 coord: 31..47 score: 29.36
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 13..207 e-value: 2.5E-5 score: 26.5
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 1..171 e-value: 9.9E-28 score: 108.1
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 8..171 e-value: 3.8E-91 score: 318.8
None	No IPR available	PANTHER	PTHR47979:SF55	RAS-RELATED PROTEIN RABB1C-LIKE	coord: 3..196
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 3..196
None	No IPR available	PROSITE	PS51419	RAB	coord: 3..204 score: 33.79353
None	No IPR available	PROSITE	PS51420	RHO	coord: 1..169 score: 10.220177
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 10..171 e-value: 1.5E-10 score: 16.0
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 9..168 e-value: 6.1E-58 score: 195.0
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 1..207 score: 17.071051
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 9..161 e-value: 4.4E-31 score: 105.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..179 e-value: 1.3E-66 score: 225.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 3..173

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0026586.1	Sed0026586.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051603	proteolysis involved in cellular protein catabolic process
biological_process	GO:0030100	regulation of endocytosis
cellular_component	GO:0005768	endosome
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005839	proteasome core complex
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0004298	threonine-type endopeptidase activity