Sed0026580 (gene) Chayote v1

Overview


Name	Sed0026580
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Polypyrimidine tract-binding protein-like protein 2
Location	LG05: 2876659 .. 2883482 (-)
RNA-Seq Expression	Sed0026580
Synteny	Sed0026580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCAATCGTTTTAGATTATGCTGCAGAAGTGAAAACTTATCCCTCTCCGTCTCTGCGAAACCCTAACTTTCAAAGTTCGTCCACTTCCTTACGTTCCCGAGGGATTATCTTCAATCATCGTACGTATTTCATATTTCGCATTCTCAATTTCCTCGCCTATCATCTTTTTTGTTTATTGATTTTCGGTATTGCCATCTCGATTCGCGCTTTTTCTTTTTTCTTTTTTCGATCCCCATGCTTGTTTTGTGTTTGTTGGCGTGCTTTGTATTCCGTTGTTTATTCTGTGATTATTTATCTAAGAATGTTTGTTGTGATTATGTGGACGATAAATGGCACTGTTTAGCTTTGATATCCTTAGTAGCAGGATTTCCTTTTTGTAATTGGCTATTTTCCCATGTAAATTGATAATTATGATGAAATTGTTTCTTATATAGAAAAAAAGATAAATGATACTGTTATGTAGCCTGAATCGTTGAATTGATCTCGCAAGTGCTTTCTTTATAATGGGTTTTATGAATTTCTCTGATTTTTCTGTTTTTTTATACATCCGTGACTGTCTGAGCCACACCTTGACTAATGTCACGTACTACATTTAGATATTAGGGAAAATAGTAGTAAATTAGTTCTTAGATATGTGGTCACCATGGATTGAACCCATCACCTTTGAATTTCCGAAGGCCCTCTTGACTTCTAGATTCTATGATGGTTCTGATTTTTCTGTATGGGTCGTCGATCTTATTAGTGATCTTGCTTTTACTGATGTGATATGTTTGGTAGATTGTTCTGTGCTTTGAAATTGTGTTTGGTTGGATCTGCAATTATGAAATTATTTGGTTTATTTGTTACTGTTTTCAACTTTATGGGCGTTTGAAAGTTAGTGAGGTGAAAAGAAGTAGATGAAGAAAGCCTCAAGCTTCAATGGTTGCATGAGGGATACGATAACATAAATTCTGTCCAGCGATGGCACTAATCTAGGTCTTTTGACCACTTACTAGAGACGAGAACTAGAACTGTGTATTTTTGGTGCAAAGATAAAGCTTATAGCTTAGCTTTTTATTTTTTTTGATATCCATGATCGTCCCTGTCTGGGCCAGCTTTGGCGCATCTCAACTATTGTCACGAGATCTACTGCTTGACCCTATAATATTTGGATGTCAAAGAAATCCGTAGGAAATTAATTTCTAGGTAGGTGACCACCATGGATTGAACCCATCACCTTTAGCACCCCAAGGCTCTCTTTGACCACTAGGCTACCTTATGATGGTTATAGCTTATATTATTTTATTTCCAAATGGAATTTATTCTTGTTAGCCCTTATGGGCATTGGGGATCCTTCTTCTTAATTTCATTATATCATTGAAATTGTTTAGTAGACGAAAAAGAAGCGAGAGATAGAAAATGCAAACTACCAAACAACTACCATTAAGAAGACCCATTTCTGTCTCTGTCGAGAACTTACTCCATCTTTGTAATGCATACCTCTTTTTATTTTTGAATTGGATCATGTTCTTTTCAATACATGAATTGGATATGTTAAAATGTGCAATGAAACATTGGAACATTAAGGATTTCATGGTACAATTGTTGATGTTGATAGAGAATTATAAGTTAATAAATGTTTGTTTTTAACCGTGTGCTGAATTTTAAGTTTTAATGATGCTAAGGCTGTTCGTAAATTTGCAGTGATTTATTAGTTGGAAAAAATGTCGTCAGTTTCTAGTCAGCCACAGTTCCGTTATACCCAGCCACCATCAAAGGTTCTTCACTTGAGGAACTTACCTTGGGAATGCACTGAGGAGGAACTGATTGAACTCGGGAAGCCTTTTGGGAAAGTTGTAAACACAAAATGTAACGTCGGAGCAAACAGAAATCAAGCCTTTATTGAGTTTGTAAGTGCAGTACTTTTTCATATATTGTGTTTATATCTTCCATGGATACTAGCTAGTCATTTCGAAAAATATTTGACCAAGTTTAAAATTACAGACAGACATAAATCAGGCGATTGCAATGATATCATATTATGCATCATCCTCGGAGCCGGCACAAGTTAGAGGAAAAACTGTTTATCTGCAGTATTCTAACCGGCAAGAAATTGTGAACAACAAAACTACAGCTGATGTTCCTGGAAATGTTCTTTTGGTAACAATTGAGGGAACTGATGCACGTCTTGTCAGCATTGATGTGTTGCACTTGGTAAGCAGATTGTAATACATTCTTGTTGCAGTTAAAGGTGAACCTCTGTGGCACTAAGATTAAATTTTGGTGATTAGGTTTTAGTTTGTCACGTTTCAAAAGCTTTTGTTTGACATGAATGTAAATTAATCAGCAGGCCTTTGTCAAAGCAATATCTTTGATGGCAGCTTAGTGCATCGGGGAAAAGAGCACACGTGTGTTTGTCTCCTTTCCTTAACACTACCTCTCTATTCCCTTCTTCCTCAACGTCCTCCTACCTTTCACAGTTTAGGATATTATAATTTCTGCTCTCTTGTGCATCCTTCTCCCTATCATCTCTGCATGACGTGTCAGTGATACTGCTGTCTAAATCCTGTCATTAGATTTGAAGTATAGAAGCTTTTTATTGTAAATTTTTGGGTTATCTGTTTTCTGTATACAAGTATTCTGCCCCAATGGACAAGCATTTGAAATGGGTGGAAGATTAATAAGATGATATTCCTTATGGCTTAGCATCTTAATTTTATGGGGCGAATTTGTCTTCTCTTTTTAAAATTATAGGATGAATGTTCAAGTTCTGGAGGCCTTCAGCTATTACTTGTCAACTTATTTCATTGATGATAATTTTTAAGATAAATTATACCGATATGTTATAATTAATTTCAAACCAGTAGTTGCTTTTTCCTCAAGTGAGACAGTCAGGTGTTACTGACTTGTTTTGGATTTGTATTTTTGCTTCATCATACATTCTCTCTTAGAGGAGTTGAGATGTACATTATCCACCATAGGTCCTTCAATTACTCTTGTTCCTGGCATTAGCATCTTAACCATATTTTTTCTATAGTTTTACCTTTGTTTTTCGCAGTAGATTTTGTGTTAAAATGTTCAATGTTTGTTAGCTAAGCTATCTATTTAGACAACCTACTAGGCCTATGTCTGGAGATTTAGGTATATTTGCGTTGGTTGTGACTGCAAAATAATTTGCACGACAGTAGGCATTAGTAGGTGTTGTGATATTCTGACAATGTGATGATGGTGTGATATCATTTGGTTTAATTACATTTTGACGTTTACTCAAATATTATGCAGGTCTTTTCAGCCTTTGGGTTTGTGCATAAAATTACTACTTTTGAGAAAACAGCTGGATTTCAGGTCCGTAAATAACTTATATTCTGGTCTGGCAGTAATCACTATAATACTTCTGAGCTTGGCGGAAATCGTATTCAGCTAATGATATTTGAACATTTTAGGCGTTGGTGCAATTTTCGGATGCAGAGACTGCATCATCTGCTAAGAATGCCTTGGATGGGAGAAGCATCCCTAGGTGACGATTGTATTGAATGTTTCACATGATTTTTTGGCCCTCCTTTATGGAGTATATAGCAGTAGAAGAGAGGTGCACATGCACTAGCCTGGTGTCTTTCTATCAGTCTGATTATTTTTTGTCTGTTGTTAAAGTATTGTAAATAGTTGACTTTAAAATGTTTTATTCCATTGTCAATAGTATTCAACCTTTTCACATAGAATGATGCTATATTTAACCTATGTGTATGATTTAAAAACTGAGTTTTAAATTCTCCCATGCTATACTTCACATGTATCATCATTTATTTCTTATTTCAGTTTGGTGGTGTCTGTTTGCAGATATCTGCTATCTGATCACGTTGGACCATGTTCCCTTAGAATAACTTACTCTGCCCACACTGATTTGACTGTGAAATTCCAGAGCCATCGAAGCAGGTTTTCCCAACTTTCTCCATCTAATCTGAAACTAATGTGTGCGTTTTTTTAATCATAGTTGTAACATTTTACAATATCTAGTTCCCCTTGCTTCCATATGCCATTTACTTTATGGTGAAATATTATTTGGCCACCGCTTTGTAACTTTGGTGTCTGTTTTATTACTATCTCTTTCTCTCTATACTTTCTTATGGTATGTTGATTCAGGGACTACACTAATCCTTATCTTCCTGTTGCTCCATCGGCCATTGATGGAAGTGGTCAGGTAAGGAATGGCATTAGTTGGCATGTTGTTAAATTGTGTACATAAATTTTCTCCCTTCCGTGTATTCTACGTGCATGTGATGAAGATAATGCTCCAATTGTTGTCAATAAATAAATAAATGAAGATAAACCTTCAAATGATGGGCTTTTCATGGAAGCGCTGGCTTATTAGTGTACAAATTGTGGCATTTCTTTTTATTGTCTCGTTTCTTATGATATTATTTTATTTTTTGACAAAGTCTTATATTATTTTTCTAAATCTTTTTCTTCCTTTCATTGAATTGGTCGTCAGTCACCTTTGCAGTTCACTGTGGGTTCGGATGGAAAGAAGCTTGAACCAGAAAGTAATGTTCTTCTTGCCTCCATTGAGAATATGCAATACGCAGTCACCTTGGACGTGTTGAACATGGTATTTGCACGATATGACAACTCTGTATCAATTTTGTTTGTGGATTTCTGAAAGCATATATTATATATATCTATATATGTATGTATATACATATATGTATGTATGTATATACATATATGTATGTATGTATGTATAATGATGGCTAATGCATATCTTATAATCCGTTGCCAATACTTTTAATGCTAACCATTTCTTTTTTTGTTTGTAGGTTTTTTCTGCGTTTGGACCTGTCCAAAAAATTGCCATGTTTGATAAGAATGGTGGAGTGCAAGCCTTGATTCAATATTCAGGTAGCTCATTTGACACTTTTCTCACCGTTGGTTATAAATGTACATTAGCAACCGCTTGTTTAAAGAAATGTGTAAAGCATATTTCCTGCCCTACTGTTTATAACATGATAGCAATTGTATCCTATAGAAGTTCAATTTTTTTTTTCTTTTTTTTTTAATAAAGAAATTCTATTTTCAAATCTGCAAACAAGTTATAAATTATCCTTGAAGAACTTTGAAGTGCAATAATATGAGAACAAGTAAGAAGATGAACCCAACAACGTTTTAATATGGTTCATTTTTTCAATCTTAATTCACATTGTTTCGATGGAAGTATGTAGCATACTAATTAGTAATCTGGGACGTGTGTACAGATGTTCAGACTGCGGTGGTTGCCAAGGAAGCCCTGGAAGGACACTGTATCTATGATGGAGGGTTTTGCAAGCTTCACCTCTCATATTCACGCCACACTGATTTGAGTATCAAGGTAATAAAAGCTTCACTCTGTGTGGTGAATTGTCCAATAGTAATTATTATCCAAGGGGGCGTTTGGGCCACCAGTTATTTAACTGGTGGATATAGCCAATTACCACTTCCAAACTAAAACCCTCCACCCTTGTTATATACAGTTTTTGATATCCGTGACCGCTCGGGCCAGCTTGCATGCATCTTGACTATTGTCATGGAACATACCACTTGGCCCTACAACATTTGGATATCAAGAAAACCTATAGAAAATTAATTCATAGATAAGTGACTATCATAGATTAAACTTATCTAGTTCTCCAAAGCCTTTTTGAACACTAGGTCACTCTATGATGGTTACCCTGTCATAATAACCAAGTTTATAAAAAAAAAATTTGAAACAAGGGTAACCACGCCTGTCCTTAGGCCAGACACTGGAGATATTGAAGGAGTAATATCATAAGTAAGTCTCAAACTTGGGACTTTGAGGGGAGCATACCCTCAAAACCCAAGTCTTCAACCACTGCGCCAATCCCTTGGGGACTTAATAACCAAATTTATAATAAAATTTTTTGTTATAATAACCTGCACTGTAACCTTGATGTAGTAACCCAACGGTAGCCCCCAAACATACTCTTGAATTTTTCTATCTAGAAGATGATGACTGTTTTGCTTCAAATTGAGTTCTGCTCCTCAGGAGTAAAGGAATGTGGACTACGTCGATTCATTTCTCAGAGGAATGTTTCTAAACGTCTTGTTTTATGTGATGGTTGTAGGTGAATAATGACCGAAGTCGAGACTATACAATTCCCAATACTCCCATGGTGAATTCTCAACCGCCTGTTGTTGGGCAGCAACCAGGTCAAATGGTGGGTTCTTCCACCCAACAATACAACGGAAATCAATATGGTCCTCCGGCAGAGCAGCAAGGGATGCAGCCTCCATCTTCTTCAGGATGGGGACCGGGCGGTCCAGCTGCGCCTTACTCCATGCCAATGCACAATCCTGGTTACATGCCATCAGGGGCAATGCCGCACCAGACAACACCACCGGCCTATCGCCCCGATCGCAGGCAATAGCACATATTTTCTTCTGTTTAATAGTTGAATGTCCATTCAAGAAAACCAACTTAGCTTCTTAAAACTAGAGCATGCAATATGGCAGAGAAGCATGTGCACTAAATTCAACGGTTACTCAAACTCTCTCACTGTTCAGAACGAATTAGGTCAGTTTTTGTTTATTTCATTTTTATTTGAAGGGAATTGAATGAATGTAAGCTCGGTTATTATTGATTATTGCCTTCAAATAGACAAAAATACTTGATTACTGTTTCATTAGGCACTTCCTTTCTCTCATTCTCATTATTTCTATTATTAGACTCTTCCCGCTTCTCGCACTATCGTCTTCGACTACTCGATATTTATACTAATTTTGATTTTGTCATAAATCGAGCTTTGTGCAGGCTGCTGAAAAATTGTATCGAGGATGTATAAATCTAGTAACA

mRNA sequence

TTTCAATCGTTTTAGATTATGCTGCAGAAGTGAAAACTTATCCCTCTCCGTCTCTGCGAAACCCTAACTTTCAAAGTTCGTCCACTTCCTTACGTTCCCGAGGGATTATCTTCAATCATCTGATTTATTAGTTGGAAAAAATGTCGTCAGTTTCTAGTCAGCCACAGTTCCGTTATACCCAGCCACCATCAAAGGTTCTTCACTTGAGGAACTTACCTTGGGAATGCACTGAGGAGGAACTGATTGAACTCGGGAAGCCTTTTGGGAAAGTTGTAAACACAAAATGTAACGTCGGAGCAAACAGAAATCAAGCCTTTATTGAGTTTACAGACATAAATCAGGCGATTGCAATGATATCATATTATGCATCATCCTCGGAGCCGGCACAAGTTAGAGGAAAAACTGTTTATCTGCAGTATTCTAACCGGCAAGAAATTGTGAACAACAAAACTACAGCTGATGTTCCTGGAAATGTTCTTTTGGTAACAATTGAGGGAACTGATGCACGTCTTGTCAGCATTGATGTGTTGCACTTGGTCTTTTCAGCCTTTGGGTTTGTGCATAAAATTACTACTTTTGAGAAAACAGCTGGATTTCAGGCGTTGGTGCAATTTTCGGATGCAGAGACTGCATCATCTGCTAAGAATGCCTTGGATGGGAGAAGCATCCCTAGATATCTGCTATCTGATCACGTTGGACCATGTTCCCTTAGAATAACTTACTCTGCCCACACTGATTTGACTGTGAAATTCCAGAGCCATCGAAGCAGGGACTACACTAATCCTTATCTTCCTGTTGCTCCATCGGCCATTGATGGAAGTGGTCAGTTCACTGTGGGTTCGGATGGAAAGAAGCTTGAACCAGAAAGTAATGTTCTTCTTGCCTCCATTGAGAATATGCAATACGCAGTCACCTTGGACGTGTTGAACATGGTTTTTTCTGCGTTTGGACCTGTCCAAAAAATTGCCATGTTTGATAAGAATGGTGGAGTGCAAGCCTTGATTCAATATTCAGATGTTCAGACTGCGGTGGTTGCCAAGGAAGCCCTGGAAGGACACTGTATCTATGATGGAGGGTTTTGCAAGCTTCACCTCTCATATTCACGCCACACTGATTTGAGTATCAAGGTGAATAATGACCGAAGTCGAGACTATACAATTCCCAATACTCCCATGGTGAATTCTCAACCGCCTGTTGTTGGGCAGCAACCAGGTCAAATGGTGGGTTCTTCCACCCAACAATACAACGGAAATCAATATGGTCCTCCGGCAGAGCAGCAAGGGATGCAGCCTCCATCTTCTTCAGGATGGGGACCGGGCGGTCCAGCTGCGCCTTACTCCATGCCAATGCACAATCCTGGTTACATGCCATCAGGGGCAATGCCGCACCAGACAACACCACCGGCCTATCGCCCCGATCGCAGGCAATAGCACATATTTTCTTCTGTTTAATAGTTGAATGTCCATTCAAGAAAACCAACTTAGCTTCTTAAAACTAGAGCATGCAATATGGCAGAGAAGCATGTGCACTAAATTCAACGGTTACTCAAACTCTCTCACTGTTCAGAACGAATTAGGTCAGTTTTTGTTTATTTCATTTTTATTTGAAGGGAATTGAATGAATGTAAGCTCGGTTATTATTGATTATTGCCTTCAAATAGACAAAAATACTTGATTACTGTTTCATTAGGCACTTCCTTTCTCTCATTCTCATTATTTCTATTATTAGACTCTTCCCGCTTCTCGCACTATCGTCTTCGACTACTCGATATTTATACTAATTTTGATTTTGTCATAAATCGAGCTTTGTGCAGGCTGCTGAAAAATTGTATCGAGGATGTATAAATCTAGTAACA

Coding sequence (CDS)

ATGTCGTCAGTTTCTAGTCAGCCACAGTTCCGTTATACCCAGCCACCATCAAAGGTTCTTCACTTGAGGAACTTACCTTGGGAATGCACTGAGGAGGAACTGATTGAACTCGGGAAGCCTTTTGGGAAAGTTGTAAACACAAAATGTAACGTCGGAGCAAACAGAAATCAAGCCTTTATTGAGTTTACAGACATAAATCAGGCGATTGCAATGATATCATATTATGCATCATCCTCGGAGCCGGCACAAGTTAGAGGAAAAACTGTTTATCTGCAGTATTCTAACCGGCAAGAAATTGTGAACAACAAAACTACAGCTGATGTTCCTGGAAATGTTCTTTTGGTAACAATTGAGGGAACTGATGCACGTCTTGTCAGCATTGATGTGTTGCACTTGGTCTTTTCAGCCTTTGGGTTTGTGCATAAAATTACTACTTTTGAGAAAACAGCTGGATTTCAGGCGTTGGTGCAATTTTCGGATGCAGAGACTGCATCATCTGCTAAGAATGCCTTGGATGGGAGAAGCATCCCTAGATATCTGCTATCTGATCACGTTGGACCATGTTCCCTTAGAATAACTTACTCTGCCCACACTGATTTGACTGTGAAATTCCAGAGCCATCGAAGCAGGGACTACACTAATCCTTATCTTCCTGTTGCTCCATCGGCCATTGATGGAAGTGGTCAGTTCACTGTGGGTTCGGATGGAAAGAAGCTTGAACCAGAAAGTAATGTTCTTCTTGCCTCCATTGAGAATATGCAATACGCAGTCACCTTGGACGTGTTGAACATGGTTTTTTCTGCGTTTGGACCTGTCCAAAAAATTGCCATGTTTGATAAGAATGGTGGAGTGCAAGCCTTGATTCAATATTCAGATGTTCAGACTGCGGTGGTTGCCAAGGAAGCCCTGGAAGGACACTGTATCTATGATGGAGGGTTTTGCAAGCTTCACCTCTCATATTCACGCCACACTGATTTGAGTATCAAGGTGAATAATGACCGAAGTCGAGACTATACAATTCCCAATACTCCCATGGTGAATTCTCAACCGCCTGTTGTTGGGCAGCAACCAGGTCAAATGGTGGGTTCTTCCACCCAACAATACAACGGAAATCAATATGGTCCTCCGGCAGAGCAGCAAGGGATGCAGCCTCCATCTTCTTCAGGATGGGGACCGGGCGGTCCAGCTGCGCCTTACTCCATGCCAATGCACAATCCTGGTTACATGCCATCAGGGGCAATGCCGCACCAGACAACACCACCGGCCTATCGCCCCGATCGCAGGCAATAG

Protein sequence

MSSVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFIEFTDINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGTDARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYLLSDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGSDGKKLEPESNVLLASIENMQYAVTLDVLNMVFSAFGPVQKIAMFDKNGGVQALIQYSDVQTAVVAKEALEGHCIYDGGFCKLHLSYSRHTDLSIKVNNDRSRDYTIPNTPMVNSQPPVVGQQPGQMVGSSTQQYNGNQYGPPAEQQGMQPPSSSGWGPGGPAAPYSMPMHNPGYMPSGAMPHQTTPPAYRPDRRQ

Homology

[Close]

BLAST of Sed0026580 vs. NCBI nr
Match: XP_023550949.1 (polypyrimidine tract-binding protein homolog 2 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 794.3 bits (2050), Expect = 5.3e-226
Identity = 404/444 (90.99%), Postives = 412/444 (92.79%), Query Frame = 0


Query: 1   MSSVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60
           M+SVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
Sbjct: 1   MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60

Query: 61  EFTDINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120
           EF DINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT
Sbjct: 61  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120

Query: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180
           DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL
Sbjct: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180

Query: 181 LSDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGSDGKKLE 240
           L DHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVG DGKK+E
Sbjct: 181 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKKIE 240

Query: 241 PESNVLLASIENMQYAVTLDVLNMVFSAFGPVQKIAMFDKNGGVQALIQYSDVQTAVVAK 300
           PESNVLLASIENMQYAVTL+VL+MVFS+FGPVQKIAMFDKNGGVQALIQY DVQTAVVAK
Sbjct: 241 PESNVLLASIENMQYAVTLEVLHMVFSSFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAK 300

Query: 301 EALEGHCIYDGGFCKLHLSYSRHTDLSIKVNNDRSRDYTIPNTP-MVNSQPPVVGQQPGQ 360
           EALEGHCIYDGGFCKLH+SYSRHTDLSIKVNNDRSRDYTIPNTP MVNSQPPVVGQQPGQ
Sbjct: 301 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTPSMVNSQPPVVGQQPGQ 360

Query: 361 MVGSSTQQYNGNQYGPPAEQQGMQPPSSSGWGPGGPAAPYSMPMHNPGYMPSGAMP---- 420
           M+G ST QYNGNQYGP AEQ G+QP  SSGWG GGPAAPYSMPMHNP YM SG MP    
Sbjct: 361 MMGPSTHQYNGNQYGPSAEQPGVQPQPSSGWGSGGPAAPYSMPMHNPAYMSSGTMPPQMA 420

Query: 421 ----------HQTTPPAYRPDRRQ 430
                     HQT PP YRPD RQ
Sbjct: 421 PGMMPSPSGLHQTPPPPYRPDHRQ 444

[Close]

BLAST of Sed0026580 vs. NCBI nr
Match: XP_022973041.1 (polypyrimidine tract-binding protein homolog 2-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 792.0 bits (2044), Expect = 2.6e-225
Identity = 403/444 (90.77%), Postives = 411/444 (92.57%), Query Frame = 0


Query: 1   MSSVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60
           M+SVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
Sbjct: 1   MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60

Query: 61  EFTDINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120
           EF DINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT
Sbjct: 61  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120

Query: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180
           DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL
Sbjct: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180

Query: 181 LSDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGSDGKKLE 240
           L DHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVG DGKK+E
Sbjct: 181 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKKIE 240

Query: 241 PESNVLLASIENMQYAVTLDVLNMVFSAFGPVQKIAMFDKNGGVQALIQYSDVQTAVVAK 300
           PESNVLLASIENMQYAVTL+VL+MVFS+FGPVQKIAMFDKNGGVQALIQY DVQTAVVAK
Sbjct: 241 PESNVLLASIENMQYAVTLEVLHMVFSSFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAK 300

Query: 301 EALEGHCIYDGGFCKLHLSYSRHTDLSIKVNNDRSRDYTIPNTP-MVNSQPPVVGQQPGQ 360
           EALEGHCIYDGGFCKLH+SYSRHTDLSIKVNNDRSRDYTIPNTP MVNSQPPVVGQQPGQ
Sbjct: 301 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTPSMVNSQPPVVGQQPGQ 360

Query: 361 MVGSSTQQYNGNQYGPPAEQQGMQPPSSSGWGPGGPAAPYSMPMHNPGYMPSGAMP---- 420
           M+G ST QYNGNQY P AEQ G+QP  SSGWG GGPAAPYSMPMHNP YM SG MP    
Sbjct: 361 MMGPSTHQYNGNQYSPSAEQPGVQPQPSSGWGSGGPAAPYSMPMHNPAYMSSGTMPPQMA 420

Query: 421 ----------HQTTPPAYRPDRRQ 430
                     HQT PP YRPD RQ
Sbjct: 421 PGMMPSPSGLHQTPPPPYRPDHRQ 444

[Close]

BLAST of Sed0026580 vs. NCBI nr
Match: XP_023550948.1 (polypyrimidine tract-binding protein homolog 2 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 788.5 bits (2035), Expect = 2.9e-224
Identity = 404/448 (90.18%), Postives = 412/448 (91.96%), Query Frame = 0


Query: 1   MSSVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60
           M+SVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
Sbjct: 1   MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60

Query: 61  EFTDINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120
           EF DINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT
Sbjct: 61  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120

Query: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180
           DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL
Sbjct: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180

Query: 181 LSDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSG----QFTVGSDG 240
           L DHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSG    QFTVG DG
Sbjct: 181 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQSPLQFTVGLDG 240

Query: 241 KKLEPESNVLLASIENMQYAVTLDVLNMVFSAFGPVQKIAMFDKNGGVQALIQYSDVQTA 300
           KK+EPESNVLLASIENMQYAVTL+VL+MVFS+FGPVQKIAMFDKNGGVQALIQY DVQTA
Sbjct: 241 KKIEPESNVLLASIENMQYAVTLEVLHMVFSSFGPVQKIAMFDKNGGVQALIQYPDVQTA 300

Query: 301 VVAKEALEGHCIYDGGFCKLHLSYSRHTDLSIKVNNDRSRDYTIPNTP-MVNSQPPVVGQ 360
           VVAKEALEGHCIYDGGFCKLH+SYSRHTDLSIKVNNDRSRDYTIPNTP MVNSQPPVVGQ
Sbjct: 301 VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTPSMVNSQPPVVGQ 360

Query: 361 QPGQMVGSSTQQYNGNQYGPPAEQQGMQPPSSSGWGPGGPAAPYSMPMHNPGYMPSGAMP 420
           QPGQM+G ST QYNGNQYGP AEQ G+QP  SSGWG GGPAAPYSMPMHNP YM SG MP
Sbjct: 361 QPGQMMGPSTHQYNGNQYGPSAEQPGVQPQPSSGWGSGGPAAPYSMPMHNPAYMSSGTMP 420

Query: 421 --------------HQTTPPAYRPDRRQ 430
                         HQT PP YRPD RQ
Sbjct: 421 PQMAPGMMPSPSGLHQTPPPPYRPDHRQ 448

[Close]

BLAST of Sed0026580 vs. NCBI nr
Match: XP_022922352.1 (polypyrimidine tract-binding protein homolog 2 isoform X2 [Cucurbita moschata])

HSP 1 Score: 788.1 bits (2034), Expect = 3.8e-224
Identity = 402/443 (90.74%), Postives = 410/443 (92.55%), Query Frame = 0


Query: 1   MSSVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60
           M+SVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
Sbjct: 1   MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60

Query: 61  EFTDINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120
           EF DINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT
Sbjct: 61  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120

Query: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180
           DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL
Sbjct: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180

Query: 181 LSDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGSDGKKLE 240
           L DHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVG DGKK+E
Sbjct: 181 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKKIE 240

Query: 241 PESNVLLASIENMQYAVTLDVLNMVFSAFGPVQKIAMFDKNGGVQALIQYSDVQTAVVAK 300
           PESNVLLASIENMQYAVTL+VL+MVFS+FGPVQKIAMFDKNGGVQALIQY DVQTAVVAK
Sbjct: 241 PESNVLLASIENMQYAVTLEVLHMVFSSFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAK 300

Query: 301 EALEGHCIYDGGFCKLHLSYSRHTDLSIKVNNDRSRDYTIPNTP-MVNSQPPVVGQQPGQ 360
           EALEGHCIYDGGFCKLH+SYSRHTDLSIKVNNDRSRDYTIPNTP MVNSQPPVVGQQPGQ
Sbjct: 301 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTPSMVNSQPPVVGQQPGQ 360

Query: 361 MVGSSTQQYNGNQYGPPAEQQGMQPPSSSGWGPGGPAAPYSMPMHNPGYMPSGAMPHQ-- 420
           M+G ST QYNGNQYGP AEQ G+QP  SSGWG GGPAAPYSMPMHNP YM SG MP Q  
Sbjct: 361 MMGPSTHQYNGNQYGPSAEQPGVQPQPSSGWGSGGPAAPYSMPMHNPAYMSSGTMPPQMA 420

Query: 421 -----------TTPPAYRPDRRQ 430
                       TPP YRP  RQ
Sbjct: 421 PGMMPSPSGLHQTPPPYRPHHRQ 443

[Close]

BLAST of Sed0026580 vs. NCBI nr
Match: KAG6579328.1 (Polypyrimidine tract-binding protein-like 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 788.1 bits (2034), Expect = 3.8e-224
Identity = 403/448 (89.96%), Postives = 412/448 (91.96%), Query Frame = 0


Query: 1   MSSVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60
           M+SVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
Sbjct: 1   MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60

Query: 61  EFTDINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120
           EF DINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT
Sbjct: 61  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120

Query: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180
           DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL
Sbjct: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180

Query: 181 LSDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSG----QFTVGSDG 240
           L DHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSG    QFTVG DG
Sbjct: 181 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQSPLQFTVGLDG 240

Query: 241 KKLEPESNVLLASIENMQYAVTLDVLNMVFSAFGPVQKIAMFDKNGGVQALIQYSDVQTA 300
           KK+EPESNVLLASIENMQYAVTL+VL+MVFS+FGPVQKIAMFDKNGGVQALIQY DVQTA
Sbjct: 241 KKIEPESNVLLASIENMQYAVTLEVLHMVFSSFGPVQKIAMFDKNGGVQALIQYPDVQTA 300

Query: 301 VVAKEALEGHCIYDGGFCKLHLSYSRHTDLSIKVNNDRSRDYTIPNTP-MVNSQPPVVGQ 360
           +VAKEALEGHCIYDGGFCKLH+SYSRHTDLSIKVNNDRSRDYTIPNTP MVNSQPPVVGQ
Sbjct: 301 IVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTPSMVNSQPPVVGQ 360

Query: 361 QPGQMVGSSTQQYNGNQYGPPAEQQGMQPPSSSGWGPGGPAAPYSMPMHNPGYMPSGAMP 420
           QPGQM+G ST QYNGNQYGP AEQ G+QP  SSGWG GGPAAPYSMPMHNP YM SG MP
Sbjct: 361 QPGQMMGPSTHQYNGNQYGPSAEQPGVQPQPSSGWGSGGPAAPYSMPMHNPAYMSSGTMP 420

Query: 421 --------------HQTTPPAYRPDRRQ 430
                         HQT PP YRPD RQ
Sbjct: 421 PQMAPGMMPSPSGLHQTPPPPYRPDHRQ 448

[Close]

BLAST of Sed0026580 vs. ExPASy Swiss-Prot
Match: Q9FGL9 (Polypyrimidine tract-binding protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At5g53180 PE=1 SV=1)

HSP 1 Score: 634.8 bits (1636), Expect = 7.1e-181
Identity = 339/428 (79.21%), Postives = 362/428 (84.58%), Query Frame = 0


Query: 1   MSSVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60
           MSSVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFG VVNTKCNVGANRNQAFI
Sbjct: 1   MSSVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGTVVNTKCNVGANRNQAFI 60

Query: 61  EFTDINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120
           EF D+NQAI MISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADV GNVLLVTIEG 
Sbjct: 61  EFEDLNQAIQMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVVGNVLLVTIEGD 120

Query: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180
           DAR+VSIDVLHLVFSAFGFVHKITTFEKTAG+QALVQF+DAETA++AK ALDGRSIPRYL
Sbjct: 121 DARMVSIDVLHLVFSAFGFVHKITTFEKTAGYQALVQFTDAETATAAKLALDGRSIPRYL 180

Query: 181 LSDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGSDGKKLE 240
           L++ VG CSL+ITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAID +GQ  VG DGKK+E
Sbjct: 181 LAETVGQCSLKITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDSTGQVAVGVDGKKME 240

Query: 241 PESNVLLASIENMQYAVTLDVLNMVFSAFGPVQKIAMFDKNGGVQALIQYSDVQTAVVAK 300
           PESNVLLASIENMQYAVTLDVL+MVF+AFG VQKIAMFDKNGGVQALIQYSDVQTAVVAK
Sbjct: 241 PESNVLLASIENMQYAVTLDVLHMVFAAFGEVQKIAMFDKNGGVQALIQYSDVQTAVVAK 300

Query: 301 EALEGHCIYDGGFCKLHLSYSRHTDLSIKVNNDRSRDYTIPNTPMVNSQPPVVGQQPGQM 360
           EALEGHCIYDGGFCKLH++YSRHTDLSIKVNNDRSRDYT+PN P+   Q PV     G  
Sbjct: 301 EALEGHCIYDGGFCKLHITYSRHTDLSIKVNNDRSRDYTMPNPPVPMPQQPVQNPYAG-- 360

Query: 361 VGSSTQQYN---GNQYGPPAEQQG--MQPPSSSGWGPGG------PAAPYSMPMHNPGYM 418
              + QQY+   G+ +    + QG  +QP      G GG       A P S  MH     
Sbjct: 361 ---NPQQYHAAGGSHHQQQQQPQGGWVQPGGQGSMGMGGGGHNHYMAPPSSSSMHQG--- 420

[Close]

BLAST of Sed0026580 vs. ExPASy Swiss-Prot
Match: Q9MAC5 (Polypyrimidine tract-binding protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=PTB PE=1 SV=1)

HSP 1 Score: 540.8 bits (1392), Expect = 1.4e-152
Identity = 280/415 (67.47%), Postives = 330/415 (79.52%), Query Frame = 0


Query: 3   SVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFIEF 62
           S S Q QFRYTQ PSKV+HLRNLPWEC EEELI+L K FGK+VNTK NVGANRNQAF+EF
Sbjct: 2   SSSGQTQFRYTQTPSKVVHLRNLPWECVEEELIDLCKRFGKIVNTKSNVGANRNQAFVEF 61

Query: 63  TDINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGTDA 122
            D+NQAI+M+SYYASSSEPAQ+RGKTVY+QYSNR EIVNN++  DVPGNVLLVT EG ++
Sbjct: 62  ADLNQAISMVSYYASSSEPAQIRGKTVYIQYSNRHEIVNNQSPGDVPGNVLLVTFEGVES 121

Query: 123 RLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYLLS 182
             VSIDV+HLVFSAFGFVHKI TFEK AGFQALVQF+D ETAS+A++ALDGRSIPRYLLS
Sbjct: 122 HEVSIDVIHLVFSAFGFVHKIATFEKAAGFQALVQFTDVETASAARSALDGRSIPRYLLS 181

Query: 183 DHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGSDGKKLEPE 242
            HVG CSLR++YSAHTDL +KFQSHRSRDYTNPYLPV  +A+DGS Q  +G+DGKK+E +
Sbjct: 182 AHVGSCSLRMSYSAHTDLNIKFQSHRSRDYTNPYLPVNQTAMDGSMQPALGADGKKVESQ 241

Query: 243 SNVLLASIENMQYAVTLDVLNMVFSAFGPVQKIAMFDKNGGVQALIQYSDVQTAVVAKEA 302
           SNVLL  IENMQYAVT+DVL+ VFSA+G VQKIA+F+KNG  QALIQYSD+ TA +AKEA
Sbjct: 242 SNVLLGLIENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAMAKEA 301

Query: 303 LEGHCIYDGGFCKLHLSYSRHTDLSIKVNNDRSRDYTIPNTPMVNSQPPVVGQQPGQMVG 362
           LEGHCIYDGG+CKL LSYSRHTDL++K  +D+SRDYT+P+  +      +V Q+   + G
Sbjct: 302 LEGHCIYDGGYCKLRLSYSRHTDLNVKAFSDKSRDYTLPDLSL------LVAQKGPAVSG 361

Query: 363 SSTQQYNGNQYGPPAEQQGMQPPSSSGWGPGGPAAPYSMPMHNP-GYMPSGAMPH 417
           S+          PPA   G Q P +     G   +PY  P  +P G  PSG  P+
Sbjct: 362 SA----------PPA---GWQNPQAQSQYSGYGGSPYMYPSSDPNGASPSGQPPY 397

[Close]

BLAST of Sed0026580 vs. ExPASy Swiss-Prot
Match: Q6ICX4 (Polypyrimidine tract-binding protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g43190 PE=2 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 4.0e-35
Identity = 116/362 (32.04%), Postives = 189/362 (52.21%), Query Frame = 0


Query: 17  SKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFIEFTDINQAIAMISYYA 76
           SKV+H+RN+  E +E +L++L +PFG  V TK  +   +NQA ++  D++ A++ + ++ 
Sbjct: 5   SKVVHVRNVGHEISENDLLQLFQPFG--VITKLVMLRAKNQALLQMQDVSSAVSALQFF- 64

Query: 77  SSSEPAQVRGKTVYLQYSNRQEIV----NNKTTADVPGNVLLVTIEGTDARLVSIDVLHL 136
           ++ +P  +RG+ VY+Q+S+ QE+     N     D P  +LLVTI       +++DVLH 
Sbjct: 65  TNVQPT-IRGRNVYVQFSSHQELTTIEQNIHGREDEPNRILLVTIHHM-LYPITVDVLHQ 124

Query: 137 VFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYLLSDHVGPCSLRI 196
           VFS +GFV K+ TF+K+AGFQAL+Q+   + A+SA+ AL GR+I       + G C L I
Sbjct: 125 VFSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQGRNI-------YDGCCQLDI 184

Query: 197 TYSAHTDLTVKFQSHRSRDYTNPYLPV-------------------------APSAIDGS 256
            +S   +L V + + RSRDYTNP LP                          A +A  G 
Sbjct: 185 QFSNLEELQVNYNNDRSRDYTNPNLPAEQKGRSSHPCYGDTGVAYPQMANTSAIAAAFGG 244

Query: 257 G--QFTVGSDGKKLEPESNVLLASIENMQYAVTLDVLNMVFSAFGPVQKIAMFDKNGGVQ 316
           G      G++ +     SN+   SI+        D L  +FS +G + +I +  +N    
Sbjct: 245 GLPPGITGTNDRCTVLVSNLNADSIDE-------DKLFNLFSLYGNIVRIKLL-RNKPDH 304

Query: 317 ALIQYSDVQTAVVAKEALEGHCIYDGGFCKLHLSYSRHTDLSIKVNNDRSRDYTIPNTPM 348
           AL+Q  D   A +A   L+G  ++     +L +++S+H +++   +   S DY   N   
Sbjct: 305 ALVQMGDGFQAELAVHFLKGAMLFGK---RLEVNFSKHPNITPGTD---SHDYVNSNLNR 340

[Close]

BLAST of Sed0026580 vs. ExPASy Swiss-Prot
Match: P26599 (Polypyrimidine tract-binding protein 1 OS=Homo sapiens OX=9606 GN=PTBP1 PE=1 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 3.8e-33
Identity = 128/401 (31.92%), Postives = 191/401 (47.63%), Query Frame = 0


Query: 16  PSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFIEFTDINQAIAMISYY 75
           PS+V+H+R LP + TE E+I LG PFGKV N     G  +NQAFIE      A  M++YY
Sbjct: 57  PSRVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKG--KNQAFIEMNTEEAANTMVNYY 116

Query: 76  ASSSEPAQVRGKTVYLQYSNRQEIVN----NKTTADV---------PGNV-LLVTIEGTD 135
            S +    +RG+ +Y+Q+SN +E+      N+  A            GN+ L  +    D
Sbjct: 117 TSVT--PVLRGQPIYIQFSNHKELKTDSSPNQARAQAALQAVNSVQSGNLALAASAAAVD 176

Query: 136 ARL-------------------VSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAE 195
           A +                   V++DVLH +FS FG V KI TF K   FQAL+Q++D  
Sbjct: 177 AGMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 236

Query: 196 TASSAKNALDGRSIPRYLLSDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLP---- 255
           +A  AK +LDG++I       +   C+LRI +S  T L VK+ + +SRDYT P LP    
Sbjct: 237 SAQHAKLSLDGQNI-------YNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 296

Query: 256 ----------------------VAPSAIDGSGQFTVGSDGKKLEP-----ESNVLLASIE 315
                                 +AP AI  S      + G+   P      ++VLL S  
Sbjct: 297 QPSLDQTMAAAFGLSVPNVHGALAPLAIP-SAAAAAAAAGRIAIPGLAGAGNSVLLVSNL 356

Query: 316 NMQYAVTLDVLNMVFSAFGPVQKI-AMFDKNGGVQALIQYSDVQTAVVAKEALEGHCIYD 352
           N +  VT   L ++F  +G VQ++  +F+K     AL+Q +D   A +A   L GH ++ 
Sbjct: 357 NPE-RVTPQSLFILFGVYGDVQRVKILFNKK--ENALVQMADGNQAQLAMSHLNGHKLH- 416

[Close]

BLAST of Sed0026580 vs. ExPASy Swiss-Prot
Match: Q8WN55 (Polypyrimidine tract-binding protein 1 OS=Bos taurus OX=9913 GN=PTBP1 PE=2 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 6.5e-33
Identity = 128/401 (31.92%), Postives = 190/401 (47.38%), Query Frame = 0


Query: 16  PSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFIEFTDINQAIAMISYY 75
           PS+V+H+R LP + TE E+I LG PFGKV N     G  +NQAFIE      A  M++YY
Sbjct: 57  PSRVIHIRKLPGDVTEGEVISLGLPFGKVTNLLMLKG--KNQAFIEMHTEEAANTMVNYY 116

Query: 76  ASSSEPAQVRGKTVYLQYSNRQEIVN----NKTTADV---------PGNV-LLVTIEGTD 135
            S +    +RG+ +Y+Q+SN +E+      N+  A            GN+ L  +    D
Sbjct: 117 TSVT--PVLRGQPIYIQFSNHKELKTDSSPNQARAQAALQAVNSVQSGNLALAASAAAVD 176

Query: 136 ARL-------------------VSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAE 195
           A +                   V++DVLH +FS FG V KI TF K   FQAL+Q++D  
Sbjct: 177 AGMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV 236

Query: 196 TASSAKNALDGRSIPRYLLSDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLP---- 255
           +A  AK +LDG++I       +   C+LRI +S  T L VK+ + +SRDYT P LP    
Sbjct: 237 SAQHAKLSLDGQNI-------YNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDS 296

Query: 256 ----------------------VAPSAIDGSGQFTVGSDGKKLEP-----ESNVLLASIE 315
                                 +AP AI  S      + G+   P      ++VLL S  
Sbjct: 297 QPSLDQTMAAAFGLSVPNVHGALAPLAIP-SAAAAAAAAGRIAIPGLAGAGNSVLLVSNL 356

Query: 316 NMQYAVTLDVLNMVFSAFGPVQKI-AMFDKNGGVQALIQYSDVQTAVVAKEALEGHCIYD 352
           N +  VT   L ++F  +G VQ++  +F+K     AL+Q +D   A +A   L GH ++ 
Sbjct: 357 NPE-RVTPQSLFILFGVYGDVQRVKVLFNKK--ENALVQMADGSQAQLAMSHLNGHKLH- 416

[Close]

BLAST of Sed0026580 vs. ExPASy TrEMBL
Match: A0A6J1I7L3 (polypyrimidine tract-binding protein homolog 2-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111471547 PE=4 SV=1)

HSP 1 Score: 792.0 bits (2044), Expect = 1.3e-225
Identity = 403/444 (90.77%), Postives = 411/444 (92.57%), Query Frame = 0


Query: 1   MSSVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60
           M+SVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
Sbjct: 1   MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60

Query: 61  EFTDINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120
           EF DINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT
Sbjct: 61  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120

Query: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180
           DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL
Sbjct: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180

Query: 181 LSDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGSDGKKLE 240
           L DHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVG DGKK+E
Sbjct: 181 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKKIE 240

Query: 241 PESNVLLASIENMQYAVTLDVLNMVFSAFGPVQKIAMFDKNGGVQALIQYSDVQTAVVAK 300
           PESNVLLASIENMQYAVTL+VL+MVFS+FGPVQKIAMFDKNGGVQALIQY DVQTAVVAK
Sbjct: 241 PESNVLLASIENMQYAVTLEVLHMVFSSFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAK 300

Query: 301 EALEGHCIYDGGFCKLHLSYSRHTDLSIKVNNDRSRDYTIPNTP-MVNSQPPVVGQQPGQ 360
           EALEGHCIYDGGFCKLH+SYSRHTDLSIKVNNDRSRDYTIPNTP MVNSQPPVVGQQPGQ
Sbjct: 301 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTPSMVNSQPPVVGQQPGQ 360

Query: 361 MVGSSTQQYNGNQYGPPAEQQGMQPPSSSGWGPGGPAAPYSMPMHNPGYMPSGAMP---- 420
           M+G ST QYNGNQY P AEQ G+QP  SSGWG GGPAAPYSMPMHNP YM SG MP    
Sbjct: 361 MMGPSTHQYNGNQYSPSAEQPGVQPQPSSGWGSGGPAAPYSMPMHNPAYMSSGTMPPQMA 420

Query: 421 ----------HQTTPPAYRPDRRQ 430
                     HQT PP YRPD RQ
Sbjct: 421 PGMMPSPSGLHQTPPPPYRPDHRQ 444

[Close]

BLAST of Sed0026580 vs. ExPASy TrEMBL
Match: A0A6J1E303 (polypyrimidine tract-binding protein homolog 2 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430366 PE=4 SV=1)

HSP 1 Score: 788.1 bits (2034), Expect = 1.8e-224
Identity = 402/443 (90.74%), Postives = 410/443 (92.55%), Query Frame = 0


Query: 1   MSSVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60
           M+SVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
Sbjct: 1   MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60

Query: 61  EFTDINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120
           EF DINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT
Sbjct: 61  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120

Query: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180
           DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL
Sbjct: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180

Query: 181 LSDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGSDGKKLE 240
           L DHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVG DGKK+E
Sbjct: 181 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKKIE 240

Query: 241 PESNVLLASIENMQYAVTLDVLNMVFSAFGPVQKIAMFDKNGGVQALIQYSDVQTAVVAK 300
           PESNVLLASIENMQYAVTL+VL+MVFS+FGPVQKIAMFDKNGGVQALIQY DVQTAVVAK
Sbjct: 241 PESNVLLASIENMQYAVTLEVLHMVFSSFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAK 300

Query: 301 EALEGHCIYDGGFCKLHLSYSRHTDLSIKVNNDRSRDYTIPNTP-MVNSQPPVVGQQPGQ 360
           EALEGHCIYDGGFCKLH+SYSRHTDLSIKVNNDRSRDYTIPNTP MVNSQPPVVGQQPGQ
Sbjct: 301 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTPSMVNSQPPVVGQQPGQ 360

Query: 361 MVGSSTQQYNGNQYGPPAEQQGMQPPSSSGWGPGGPAAPYSMPMHNPGYMPSGAMPHQ-- 420
           M+G ST QYNGNQYGP AEQ G+QP  SSGWG GGPAAPYSMPMHNP YM SG MP Q  
Sbjct: 361 MMGPSTHQYNGNQYGPSAEQPGVQPQPSSGWGSGGPAAPYSMPMHNPAYMSSGTMPPQMA 420

Query: 421 -----------TTPPAYRPDRRQ 430
                       TPP YRP  RQ
Sbjct: 421 PGMMPSPSGLHQTPPPYRPHHRQ 443

[Close]

BLAST of Sed0026580 vs. ExPASy TrEMBL
Match: A0A5D3C3L0 (Polypyrimidine tract-binding protein-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00590 PE=4 SV=1)

HSP 1 Score: 787.7 bits (2033), Expect = 2.4e-224
Identity = 407/445 (91.46%), Postives = 413/445 (92.81%), Query Frame = 0


Query: 1   MSSVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60
           M+SVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
Sbjct: 1   MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60

Query: 61  EFTDINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120
           EF DINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT
Sbjct: 61  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120

Query: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180
           DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL
Sbjct: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180

Query: 181 LSDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGSDGKKLE 240
           L DHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVG DGKKLE
Sbjct: 181 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKKLE 240

Query: 241 PESNVLLASIENMQYAVTLDVLNMVFSAFGPVQKIAMFDKNGGVQALIQYSDVQTAVVAK 300
           PESNVLLASIENMQYAVTL+VL+MVFSAFGPVQKIAMFDKNGGVQALIQY DVQTAVVAK
Sbjct: 241 PESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAK 300

Query: 301 EALEGHCIYDGGFCKLHLSYSRHTDLSIKVNNDRSRDYTIPNT-PMVNSQPPVVG-QQPG 360
           EALEGHCIYDGGFCKLH+SYSRHTDLSIKVNNDRSRDYTIPN  PMVNSQPPVVG QQP 
Sbjct: 301 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQQQPH 360

Query: 361 QMVGSSTQQYNGNQYGPPAEQQ-GMQPPSSSGWGPGGPAAPY-SMPMHNPGYMPSGAMP- 420
           QM+G ST QYNGNQYGP  EQQ G+QPP SSGWG GGPAAPY SMPMHNPGYMPSG MP 
Sbjct: 361 QMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMHNPGYMPSGTMPP 420

Query: 421 -----------HQTTPPAYRPDRRQ 430
                      HQT PP YRPD RQ
Sbjct: 421 QHGMMPSPSGLHQTPPPPYRPDHRQ 445

[Close]

BLAST of Sed0026580 vs. ExPASy TrEMBL
Match: A0A1S3AUZ4 (LOW QUALITY PROTEIN: polypyrimidine tract-binding protein homolog 2 OS=Cucumis melo OX=3656 GN=LOC103482951 PE=4 SV=1)

HSP 1 Score: 787.7 bits (2033), Expect = 2.4e-224
Identity = 407/445 (91.46%), Postives = 413/445 (92.81%), Query Frame = 0


Query: 1   MSSVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60
           M+SVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
Sbjct: 306 MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 365

Query: 61  EFTDINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120
           EF DINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT
Sbjct: 366 EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 425

Query: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180
           DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL
Sbjct: 426 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 485

Query: 181 LSDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGSDGKKLE 240
           L DHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVG DGKKLE
Sbjct: 486 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGLDGKKLE 545

Query: 241 PESNVLLASIENMQYAVTLDVLNMVFSAFGPVQKIAMFDKNGGVQALIQYSDVQTAVVAK 300
           PESNVLLASIENMQYAVTL+VL+MVFSAFGPVQKIAMFDKNGGVQALIQY DVQTAVVAK
Sbjct: 546 PESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAK 605

Query: 301 EALEGHCIYDGGFCKLHLSYSRHTDLSIKVNNDRSRDYTIPNT-PMVNSQPPVVG-QQPG 360
           EALEGHCIYDGGFCKLH+SYSRHTDLSIKVNNDRSRDYTIPN  PMVNSQPPVVG QQP 
Sbjct: 606 EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQQQPH 665

Query: 361 QMVGSSTQQYNGNQYGPPAEQQ-GMQPPSSSGWGPGGPAAPY-SMPMHNPGYMPSGAMP- 420
           QM+G ST QYNGNQYGP  EQQ G+QPP SSGWG GGPAAPY SMPMHNPGYMPSG MP 
Sbjct: 666 QMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMHNPGYMPSGTMPP 725

Query: 421 -----------HQTTPPAYRPDRRQ 430
                      HQT PP YRPD RQ
Sbjct: 726 QHGMMPSPSGLHQTPPPPYRPDHRQ 750

[Close]

BLAST of Sed0026580 vs. ExPASy TrEMBL
Match: A0A6J1IDD4 (polypyrimidine tract-binding protein homolog 2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471547 PE=4 SV=1)

HSP 1 Score: 786.2 bits (2029), Expect = 7.0e-224
Identity = 403/448 (89.96%), Postives = 411/448 (91.74%), Query Frame = 0


Query: 1   MSSVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60
           M+SVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
Sbjct: 1   MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60

Query: 61  EFTDINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120
           EF DINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT
Sbjct: 61  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120

Query: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180
           DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL
Sbjct: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180

Query: 181 LSDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSG----QFTVGSDG 240
           L DHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSG    QFTVG DG
Sbjct: 181 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQSPLQFTVGLDG 240

Query: 241 KKLEPESNVLLASIENMQYAVTLDVLNMVFSAFGPVQKIAMFDKNGGVQALIQYSDVQTA 300
           KK+EPESNVLLASIENMQYAVTL+VL+MVFS+FGPVQKIAMFDKNGGVQALIQY DVQTA
Sbjct: 241 KKIEPESNVLLASIENMQYAVTLEVLHMVFSSFGPVQKIAMFDKNGGVQALIQYPDVQTA 300

Query: 301 VVAKEALEGHCIYDGGFCKLHLSYSRHTDLSIKVNNDRSRDYTIPNTP-MVNSQPPVVGQ 360
           VVAKEALEGHCIYDGGFCKLH+SYSRHTDLSIKVNNDRSRDYTIPNTP MVNSQPPVVGQ
Sbjct: 301 VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTPSMVNSQPPVVGQ 360

Query: 361 QPGQMVGSSTQQYNGNQYGPPAEQQGMQPPSSSGWGPGGPAAPYSMPMHNPGYMPSGAMP 420
           QPGQM+G ST QYNGNQY P AEQ G+QP  SSGWG GGPAAPYSMPMHNP YM SG MP
Sbjct: 361 QPGQMMGPSTHQYNGNQYSPSAEQPGVQPQPSSGWGSGGPAAPYSMPMHNPAYMSSGTMP 420

Query: 421 --------------HQTTPPAYRPDRRQ 430
                         HQT PP YRPD RQ
Sbjct: 421 PQMAPGMMPSPSGLHQTPPPPYRPDHRQ 448

[Close]

BLAST of Sed0026580 vs. TAIR 10
Match: AT5G53180.1 (polypyrimidine tract-binding protein 2 )

HSP 1 Score: 634.8 bits (1636), Expect = 5.0e-182
Identity = 339/428 (79.21%), Postives = 362/428 (84.58%), Query Frame = 0


Query: 1   MSSVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60
           MSSVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFG VVNTKCNVGANRNQAFI
Sbjct: 1   MSSVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGTVVNTKCNVGANRNQAFI 60

Query: 61  EFTDINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120
           EF D+NQAI MISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADV GNVLLVTIEG 
Sbjct: 61  EFEDLNQAIQMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVVGNVLLVTIEGD 120

Query: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180
           DAR+VSIDVLHLVFSAFGFVHKITTFEKTAG+QALVQF+DAETA++AK ALDGRSIPRYL
Sbjct: 121 DARMVSIDVLHLVFSAFGFVHKITTFEKTAGYQALVQFTDAETATAAKLALDGRSIPRYL 180

Query: 181 LSDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGSDGKKLE 240
           L++ VG CSL+ITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAID +GQ  VG DGKK+E
Sbjct: 181 LAETVGQCSLKITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDSTGQVAVGVDGKKME 240

Query: 241 PESNVLLASIENMQYAVTLDVLNMVFSAFGPVQKIAMFDKNGGVQALIQYSDVQTAVVAK 300
           PESNVLLASIENMQYAVTLDVL+MVF+AFG VQKIAMFDKNGGVQALIQYSDVQTAVVAK
Sbjct: 241 PESNVLLASIENMQYAVTLDVLHMVFAAFGEVQKIAMFDKNGGVQALIQYSDVQTAVVAK 300

Query: 301 EALEGHCIYDGGFCKLHLSYSRHTDLSIKVNNDRSRDYTIPNTPMVNSQPPVVGQQPGQM 360
           EALEGHCIYDGGFCKLH++YSRHTDLSIKVNNDRSRDYT+PN P+   Q PV     G  
Sbjct: 301 EALEGHCIYDGGFCKLHITYSRHTDLSIKVNNDRSRDYTMPNPPVPMPQQPVQNPYAG-- 360

Query: 361 VGSSTQQYN---GNQYGPPAEQQG--MQPPSSSGWGPGG------PAAPYSMPMHNPGYM 418
              + QQY+   G+ +    + QG  +QP      G GG       A P S  MH     
Sbjct: 361 ---NPQQYHAAGGSHHQQQQQPQGGWVQPGGQGSMGMGGGGHNHYMAPPSSSSMHQG--- 420

[Close]

BLAST of Sed0026580 vs. TAIR 10
Match: AT3G01150.1 (polypyrimidine tract-binding protein 1 )

HSP 1 Score: 540.8 bits (1392), Expect = 9.9e-154
Identity = 280/415 (67.47%), Postives = 330/415 (79.52%), Query Frame = 0


Query: 3   SVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFIEF 62
           S S Q QFRYTQ PSKV+HLRNLPWEC EEELI+L K FGK+VNTK NVGANRNQAF+EF
Sbjct: 2   SSSGQTQFRYTQTPSKVVHLRNLPWECVEEELIDLCKRFGKIVNTKSNVGANRNQAFVEF 61

Query: 63  TDINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGTDA 122
            D+NQAI+M+SYYASSSEPAQ+RGKTVY+QYSNR EIVNN++  DVPGNVLLVT EG ++
Sbjct: 62  ADLNQAISMVSYYASSSEPAQIRGKTVYIQYSNRHEIVNNQSPGDVPGNVLLVTFEGVES 121

Query: 123 RLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYLLS 182
             VSIDV+HLVFSAFGFVHKI TFEK AGFQALVQF+D ETAS+A++ALDGRSIPRYLLS
Sbjct: 122 HEVSIDVIHLVFSAFGFVHKIATFEKAAGFQALVQFTDVETASAARSALDGRSIPRYLLS 181

Query: 183 DHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGSDGKKLEPE 242
            HVG CSLR++YSAHTDL +KFQSHRSRDYTNPYLPV  +A+DGS Q  +G+DGKK+E +
Sbjct: 182 AHVGSCSLRMSYSAHTDLNIKFQSHRSRDYTNPYLPVNQTAMDGSMQPALGADGKKVESQ 241

Query: 243 SNVLLASIENMQYAVTLDVLNMVFSAFGPVQKIAMFDKNGGVQALIQYSDVQTAVVAKEA 302
           SNVLL  IENMQYAVT+DVL+ VFSA+G VQKIA+F+KNG  QALIQYSD+ TA +AKEA
Sbjct: 242 SNVLLGLIENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAMAKEA 301

Query: 303 LEGHCIYDGGFCKLHLSYSRHTDLSIKVNNDRSRDYTIPNTPMVNSQPPVVGQQPGQMVG 362
           LEGHCIYDGG+CKL LSYSRHTDL++K  +D+SRDYT+P+  +      +V Q+   + G
Sbjct: 302 LEGHCIYDGGYCKLRLSYSRHTDLNVKAFSDKSRDYTLPDLSL------LVAQKGPAVSG 361

Query: 363 SSTQQYNGNQYGPPAEQQGMQPPSSSGWGPGGPAAPYSMPMHNP-GYMPSGAMPH 417
           S+          PPA   G Q P +     G   +PY  P  +P G  PSG  P+
Sbjct: 362 SA----------PPA---GWQNPQAQSQYSGYGGSPYMYPSSDPNGASPSGQPPY 397

[Close]

BLAST of Sed0026580 vs. TAIR 10
Match: AT3G01150.2 (polypyrimidine tract-binding protein 1 )

HSP 1 Score: 477.2 bits (1227), Expect = 1.3e-134
Identity = 254/415 (61.20%), Postives = 304/415 (73.25%), Query Frame = 0


Query: 3   SVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFIEF 62
           S S Q QFRYTQ PSKV+HLRNLPWEC EEELI+L K FGK+VNTK NVGANRNQAF+EF
Sbjct: 2   SSSGQTQFRYTQTPSKVVHLRNLPWECVEEELIDLCKRFGKIVNTKSNVGANRNQAFVEF 61

Query: 63  TDINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGTDA 122
            D+NQAI+M+SYYASSSEPAQ+RGKTVY+QYSNR EIVNN++  DVPGNVLLVT EG ++
Sbjct: 62  ADLNQAISMVSYYASSSEPAQIRGKTVYIQYSNRHEIVNNQSPGDVPGNVLLVTFEGVES 121

Query: 123 RLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYLLS 182
                                         +ALVQF+D ETAS+A++ALDGRSIPRYLLS
Sbjct: 122 H-----------------------------EALVQFTDVETASAARSALDGRSIPRYLLS 181

Query: 183 DHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGSDGKKLEPE 242
            HVG CSLR++YSAHTDL +KFQSHRSRDYTNPYLPV  +A+DGS Q  +G+DGKK+E +
Sbjct: 182 AHVGSCSLRMSYSAHTDLNIKFQSHRSRDYTNPYLPVNQTAMDGSMQPALGADGKKVESQ 241

Query: 243 SNVLLASIENMQYAVTLDVLNMVFSAFGPVQKIAMFDKNGGVQALIQYSDVQTAVVAKEA 302
           SNVLL  IENMQYAVT+DVL+ VFSA+G VQKIA+F+KNG  QALIQYSD+ TA +AKEA
Sbjct: 242 SNVLLGLIENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAMAKEA 301

Query: 303 LEGHCIYDGGFCKLHLSYSRHTDLSIKVNNDRSRDYTIPNTPMVNSQPPVVGQQPGQMVG 362
           LEGHCIYDGG+CKL LSYSRHTDL++K  +D+SRDYT+P+  +      +V Q+   + G
Sbjct: 302 LEGHCIYDGGYCKLRLSYSRHTDLNVKAFSDKSRDYTLPDLSL------LVAQKGPAVSG 361

Query: 363 SSTQQYNGNQYGPPAEQQGMQPPSSSGWGPGGPAAPYSMPMHNP-GYMPSGAMPH 417
           S+          PPA   G Q P +     G   +PY  P  +P G  PSG  P+
Sbjct: 362 SA----------PPA---GWQNPQAQSQYSGYGGSPYMYPSSDPNGASPSGQPPY 368

[Close]

BLAST of Sed0026580 vs. TAIR 10
Match: AT5G53180.2 (polypyrimidine tract-binding protein 2 )

HSP 1 Score: 389.0 bits (998), Expect = 4.8e-108
Identity = 214/296 (72.30%), Postives = 235/296 (79.39%), Query Frame = 0


Query: 133 VFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYLLSDHVGPCSLRI 192
           VFSAFGFVHKITTFEKTAG+QALVQF+DAETA++AK ALDGRSIPRYLL++ VG CSL+I
Sbjct: 33  VFSAFGFVHKITTFEKTAGYQALVQFTDAETATAAKLALDGRSIPRYLLAETVGQCSLKI 92

Query: 193 TYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQFTVGSDGKKLEPESNVLLASIEN 252
           TYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAID +GQ  VG DGKK+EPESNVLLASIEN
Sbjct: 93  TYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDSTGQVAVGVDGKKMEPESNVLLASIEN 152

Query: 253 MQYAVTLDVLNMVFSAFGPVQKIAMFDKNGGVQALIQYSDVQTAVVAKEALEGHCIYDGG 312
           MQYAVTLDVL+MVF+AFG VQKIAMFDKNGGVQALIQYSDVQTAVVAKEALEGHCIYDGG
Sbjct: 153 MQYAVTLDVLHMVFAAFGEVQKIAMFDKNGGVQALIQYSDVQTAVVAKEALEGHCIYDGG 212

Query: 313 FCKLHLSYSRHTDLSIKVNNDRSRDYTIPNTPMVNSQPPVVGQQPGQMVGSSTQQYN--- 372
           FCKLH++YSRHTDLSIKVNNDRSRDYT+PN P+   Q PV     G     + QQY+   
Sbjct: 213 FCKLHITYSRHTDLSIKVNNDRSRDYTMPNPPVPMPQQPVQNPYAG-----NPQQYHAAG 272

Query: 373 GNQYGPPAEQQG--MQPPSSSGWGPGG------PAAPYSMPMHNPGYMPSGAMPHQ 418
           G+ +    + QG  +QP      G GG       A P S  MH     P G MP Q
Sbjct: 273 GSHHQQQQQPQGGWVQPGGQGSMGMGGGGHNHYMAPPSSSSMHQG---PGGHMPPQ 320

[Close]

BLAST of Sed0026580 vs. TAIR 10
Match: AT1G43190.1 (polypyrimidine tract-binding protein 3 )

HSP 1 Score: 150.6 bits (379), Expect = 2.9e-36
Identity = 116/362 (32.04%), Postives = 189/362 (52.21%), Query Frame = 0


Query: 17  SKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFIEFTDINQAIAMISYYA 76
           SKV+H+RN+  E +E +L++L +PFG  V TK  +   +NQA ++  D++ A++ + ++ 
Sbjct: 5   SKVVHVRNVGHEISENDLLQLFQPFG--VITKLVMLRAKNQALLQMQDVSSAVSALQFF- 64

Query: 77  SSSEPAQVRGKTVYLQYSNRQEIV----NNKTTADVPGNVLLVTIEGTDARLVSIDVLHL 136
           ++ +P  +RG+ VY+Q+S+ QE+     N     D P  +LLVTI       +++DVLH 
Sbjct: 65  TNVQPT-IRGRNVYVQFSSHQELTTIEQNIHGREDEPNRILLVTIHHM-LYPITVDVLHQ 124

Query: 137 VFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYLLSDHVGPCSLRI 196
           VFS +GFV K+ TF+K+AGFQAL+Q+   + A+SA+ AL GR+I       + G C L I
Sbjct: 125 VFSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQGRNI-------YDGCCQLDI 184

Query: 197 TYSAHTDLTVKFQSHRSRDYTNPYLPV-------------------------APSAIDGS 256
            +S   +L V + + RSRDYTNP LP                          A +A  G 
Sbjct: 185 QFSNLEELQVNYNNDRSRDYTNPNLPAEQKGRSSHPCYGDTGVAYPQMANTSAIAAAFGG 244

Query: 257 G--QFTVGSDGKKLEPESNVLLASIENMQYAVTLDVLNMVFSAFGPVQKIAMFDKNGGVQ 316
           G      G++ +     SN+   SI+        D L  +FS +G + +I +  +N    
Sbjct: 245 GLPPGITGTNDRCTVLVSNLNADSIDE-------DKLFNLFSLYGNIVRIKLL-RNKPDH 304

Query: 317 ALIQYSDVQTAVVAKEALEGHCIYDGGFCKLHLSYSRHTDLSIKVNNDRSRDYTIPNTPM 348
           AL+Q  D   A +A   L+G  ++     +L +++S+H +++   +   S DY   N   
Sbjct: 305 ALVQMGDGFQAELAVHFLKGAMLFGK---RLEVNFSKHPNITPGTD---SHDYVNSNLNR 340

The following BLAST results are available for this feature:

BLAST of Sed0026580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023550949.1	5.3e-226	90.99	polypyrimidine tract-binding protein homolog 2 isoform X2 [Cucurbita pepo subsp....	[more]
XP_022973041.1	2.6e-225	90.77	polypyrimidine tract-binding protein homolog 2-like isoform X2 [Cucurbita maxima...	[more]
XP_023550948.1	2.9e-224	90.18	polypyrimidine tract-binding protein homolog 2 isoform X1 [Cucurbita pepo subsp....	[more]
XP_022922352.1	3.8e-224	90.74	polypyrimidine tract-binding protein homolog 2 isoform X2 [Cucurbita moschata]	[more]
KAG6579328.1	3.8e-224	89.96	Polypyrimidine tract-binding protein-like 2, partial [Cucurbita argyrosperma sub...	[more]

BLAST of Sed0026580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FGL9	7.1e-181	79.21	Polypyrimidine tract-binding protein homolog 2 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9MAC5	1.4e-152	67.47	Polypyrimidine tract-binding protein homolog 1 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q6ICX4	4.0e-35	32.04	Polypyrimidine tract-binding protein homolog 3 OS=Arabidopsis thaliana OX=3702 G...	[more]
P26599	3.8e-33	31.92	Polypyrimidine tract-binding protein 1 OS=Homo sapiens OX=9606 GN=PTBP1 PE=1 SV=...	[more]
Q8WN55	6.5e-33	31.92	Polypyrimidine tract-binding protein 1 OS=Bos taurus OX=9913 GN=PTBP1 PE=2 SV=1	[more]

BLAST of Sed0026580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I7L3	1.3e-225	90.77	polypyrimidine tract-binding protein homolog 2-like isoform X2 OS=Cucurbita maxi...	[more]
A0A6J1E303	1.8e-224	90.74	polypyrimidine tract-binding protein homolog 2 isoform X2 OS=Cucurbita moschata ...	[more]
A0A5D3C3L0	2.4e-224	91.46	Polypyrimidine tract-binding protein-like protein 2 OS=Cucumis melo var. makuwa ...	[more]
A0A1S3AUZ4	2.4e-224	91.46	LOW QUALITY PROTEIN: polypyrimidine tract-binding protein homolog 2 OS=Cucumis m...	[more]
A0A6J1IDD4	7.0e-224	89.96	polypyrimidine tract-binding protein homolog 2-like isoform X1 OS=Cucurbita maxi...	[more]

BLAST of Sed0026580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53180.1	5.0e-182	79.21	polypyrimidine tract-binding protein 2	[more]
AT3G01150.1	9.9e-154	67.47	polypyrimidine tract-binding protein 1	[more]
AT3G01150.2	1.3e-134	61.20	polypyrimidine tract-binding protein 1	[more]
AT5G53180.2	4.8e-108	72.30	polypyrimidine tract-binding protein 2	[more]
AT1G43190.1	2.9e-36	32.04	polypyrimidine tract-binding protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 251..321 e-value: 0.18 score: 13.2 coord: 19..92 e-value: 2.3E-9 score: 47.1
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 22..73 e-value: 4.2E-8 score: 32.9
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 18..96 score: 11.980452
None	No IPR available	PFAM	PF13893	RRM_5	coord: 109..176 e-value: 0.0047 score: 16.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 345..433
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 345..391
None	No IPR available	PANTHER	PTHR15592:SF29	POLYPYRIMIDINE TRACT-BINDING PROTEIN HOMOLOG 2	coord: 1..426
None	No IPR available	PANTHER	PTHR15592	MATRIN 3/NUCLEAR PROTEIN 220-RELATED	coord: 1..426
IPR021790	PTBP1, RNA recognition motif 2-like	PFAM	PF11835	RRM_8	coord: 247..325 e-value: 3.3E-7 score: 30.4
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 246..352 e-value: 5.7E-36 score: 124.8 coord: 111..221 e-value: 7.2E-33 score: 114.8
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 5..110 e-value: 1.3E-25 score: 91.7
IPR034792	PTBPH1/PTBPH2, RNA recognition motif 1	CDD	cd12686	RRM1_PTBPH1_PTBPH2	coord: 16..96 e-value: 3.05669E-56 score: 178.597
IPR034793	PTBPH1/PTBPH2, RNA recognition motif 2	CDD	cd12691	RRM2_PTBPH1_PTBPH2	coord: 110..204 e-value: 2.93812E-60 score: 189.287
IPR034794	PTBPH1/PTBPH2, RNA recognition motif 3	CDD	cd12690	RRM3_PTBPH1_PTBPH2	coord: 247..343 e-value: 2.43655E-66 score: 205.094
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 253..348
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 6..101
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 125..218

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0026580.1	Sed0026580.1	mRNA
Sed0026580.2	Sed0026580.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding