Sed0026562 (gene) Chayote v1

Overview


Name	Sed0026562
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Location	LG11: 25776739 .. 25778046 (+)
RNA-Seq Expression	Sed0026562
Synteny	Sed0026562

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCTACTTAATTAATCACATTTGCTCGTTTTCTCCCCTTTATTTAAATCCCCAAATTCATTCCCACTCTCTGTTTCCTAATTCGATTTAAACAAAAAAAATGGTTCTCCGTAAATTCGATTCCATCAAAGGAAATTGCGGCCGCCGTCGGAAACTCAAGCGGCTGGTCGAGTTTTTTGTGTTTTTGTTCCTCGTTTTCCACTGGTCCAGCTTCTTCTCTCTCGCCGGTCCGGTCTTTCGCCATTTTTTCCGGCGGCTCCTCCTCGTCCTCAATAGTCACATCTTCGTCTTCCTCGTTTTCCACGCTATGCTCTTCCTCGTCCACACTCTCTCCCATTTGACCGACAACAAACCCGGTTCTAACCGGACCGACACCGAGTCGGGTACCAATGCCCGGTTTCCTCACGCAACCGCCGGCGACGCGCCGGAGATTTCGGTGCCTTCGAGGGAAGATTCAGTCGACGAGATATTGGTCGTTGGTGAGAAAAACACGGCGCCGACGCTGGAGATTTTGCCGTCTCCGGTTGACGAATCCCTCGTCGGGGAGGAGAATATGGCGAAATCGCCGGTGGATGTAGCTTCAATTGGAGCAACTCCGGTGGAGGAGACAACGACAGCGCCGTTGCCGGAAACTAGACGGTACCGGAAGACGGAATCGGAGAGATTCAAAGGGAATCGGGAAAAGGGCAAGCTCCGGCGGTCGATGACGGCGATTCAGTGGGAGAGCGGCGGAGAAGCGGCGAGGTTCTTGAAATGGGTGGACGAAATGGACATCGAGGATTTCAATCGGACGGTGGAGAGCTTCATCGCTGAACAGAAACTGCACATCGGCGGGAAGATTTCCGGCTGAGAGAGAATTTCCGACAAACCGAACAGAAACAATCTGCAACAGACAGACACAGAGACAGAGAGAGGGGGAAAATAGGTTTGGATTGTTTTCTGTTTTCCATTAAAATGGTCCCAAATTTCTCGGAATTGTAATATTTCATAATTTTCTATTTCCCCAAATTTGCCAATTCTGAAATGTGGGATTTGAGAATCCTGGAAATTTTCCAGGAATTTCAAAGAGCAAAACGTTATTTATTTTTTGTAAATATTCAATGTGTCAGAGAAAATATTGGGGAATAATGGGTCTTCCTGTCTAACCAATATTCTTCACTTCCTTTTTTTTTTTTAAATATTTTTTACTCATCCGTTTTAATAATTCATGAAGAAAATAAGTTGATTTTTTTTTTTTCAATTGAATGATTTTCTTAAAAAAAATTTAATACAAATTTTCTAATGGTGAAAACGAGGAATGAATTGAGCG

mRNA sequence

CCCTACTTAATTAATCACATTTGCTCGTTTTCTCCCCTTTATTTAAATCCCCAAATTCATTCCCACTCTCTGTTTCCTAATTCGATTTAAACAAAAAAAATGGTTCTCCGTAAATTCGATTCCATCAAAGGAAATTGCGGCCGCCGTCGGAAACTCAAGCGGCTGGTCGAGTTTTTTGTGTTTTTGTTCCTCGTTTTCCACTGGTCCAGCTTCTTCTCTCTCGCCGGTCCGGTCTTTCGCCATTTTTTCCGGCGGCTCCTCCTCGTCCTCAATAGTCACATCTTCGTCTTCCTCGTTTTCCACGCTATGCTCTTCCTCGTCCACACTCTCTCCCATTTGACCGACAACAAACCCGGTTCTAACCGGACCGACACCGAGTCGGGTACCAATGCCCGGTTTCCTCACGCAACCGCCGGCGACGCGCCGGAGATTTCGGTGCCTTCGAGGGAAGATTCAGTCGACGAGATATTGGTCGTTGGTGAGAAAAACACGGCGCCGACGCTGGAGATTTTGCCGTCTCCGGTTGACGAATCCCTCGTCGGGGAGGAGAATATGGCGAAATCGCCGGTGGATGTAGCTTCAATTGGAGCAACTCCGGTGGAGGAGACAACGACAGCGCCGTTGCCGGAAACTAGACGGTACCGGAAGACGGAATCGGAGAGATTCAAAGGGAATCGGGAAAAGGGCAAGCTCCGGCGGTCGATGACGGCGATTCAGTGGGAGAGCGGCGGAGAAGCGGCGAGGTTCTTGAAATGGGTGGACGAAATGGACATCGAGGATTTCAATCGGACGGTGGAGAGCTTCATCGCTGAACAGAAACTGCACATCGGCGGGAAGATTTCCGGCTGAGAGAGAATTTCCGACAAACCGAACAGAAACAATCTGCAACAGACAGACACAGAGACAGAGAGAGGGGGAAAATAGGTTTGGATTGTTTTCTGTTTTCCATTAAAATGGTCCCAAATTTCTCGGAATTGTAATATTTCATAATTTTCTATTTCCCCAAATTTGCCAATTCTGAAATGTGGGATTTGAGAATCCTGGAAATTTTCCAGGAATTTCAAAGAGCAAAACGTTATTTATTTTTTGTAAATATTCAATGTGTCAGAGAAAATATTGGGGAATAATGGGTCTTCCTGTCTAACCAATATTCTTCACTTCCTTTTTTTTTTTTAAATATTTTTTACTCATCCGTTTTAATAATTCATGAAGAAAATAAGTTGATTTTTTTTTTTTCAATTGAATGATTTTCTTAAAAAAAATTTAATACAAATTTTCTAATGGTGAAAACGAGGAATGAATTGAGCG

Coding sequence (CDS)

ATGGTTCTCCGTAAATTCGATTCCATCAAAGGAAATTGCGGCCGCCGTCGGAAACTCAAGCGGCTGGTCGAGTTTTTTGTGTTTTTGTTCCTCGTTTTCCACTGGTCCAGCTTCTTCTCTCTCGCCGGTCCGGTCTTTCGCCATTTTTTCCGGCGGCTCCTCCTCGTCCTCAATAGTCACATCTTCGTCTTCCTCGTTTTCCACGCTATGCTCTTCCTCGTCCACACTCTCTCCCATTTGACCGACAACAAACCCGGTTCTAACCGGACCGACACCGAGTCGGGTACCAATGCCCGGTTTCCTCACGCAACCGCCGGCGACGCGCCGGAGATTTCGGTGCCTTCGAGGGAAGATTCAGTCGACGAGATATTGGTCGTTGGTGAGAAAAACACGGCGCCGACGCTGGAGATTTTGCCGTCTCCGGTTGACGAATCCCTCGTCGGGGAGGAGAATATGGCGAAATCGCCGGTGGATGTAGCTTCAATTGGAGCAACTCCGGTGGAGGAGACAACGACAGCGCCGTTGCCGGAAACTAGACGGTACCGGAAGACGGAATCGGAGAGATTCAAAGGGAATCGGGAAAAGGGCAAGCTCCGGCGGTCGATGACGGCGATTCAGTGGGAGAGCGGCGGAGAAGCGGCGAGGTTCTTGAAATGGGTGGACGAAATGGACATCGAGGATTTCAATCGGACGGTGGAGAGCTTCATCGCTGAACAGAAACTGCACATCGGCGGGAAGATTTCCGGCTGA

Protein sequence

MVLRKFDSIKGNCGRRRKLKRLVEFFVFLFLVFHWSSFFSLAGPVFRHFFRRLLLVLNSHIFVFLVFHAMLFLVHTLSHLTDNKPGSNRTDTESGTNARFPHATAGDAPEISVPSREDSVDEILVVGEKNTAPTLEILPSPVDESLVGEENMAKSPVDVASIGATPVEETTTAPLPETRRYRKTESERFKGNREKGKLRRSMTAIQWESGGEAARFLKWVDEMDIEDFNRTVESFIAEQKLHIGGKISG

Homology

[Close]

BLAST of Sed0026562 vs. NCBI nr
Match: KAG6585580.1 (hypothetical protein SDJN03_18313, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 275.4 bits (703), Expect = 4.8e-70
Identity = 161/262 (61.45%), Postives = 190/262 (72.52%), Query Frame = 0


Query: 1   MVLRKFDSIK----GNCGRRRKLKRLVEFFVFLFLVFHWSSFFSLAGPVFRHFFRRLLLV 60
           MVL  FDS+K     N GRRRKLK L EF +FLFLVFH SS FSLAGP FRHFFRR+L+V
Sbjct: 1   MVLNGFDSVKAISMANSGRRRKLKWLFEFIMFLFLVFHRSSLFSLAGPFFRHFFRRILVV 60

Query: 61  LNSHIFVFLVFHAMLFLVHTLSHLTDNKPGSNRTDTESGTNARFPHATAGDAPEISVPSR 120
           LNSH FVF+VFHAMLF+V++LSHLTDN  GSNRTD ES  +AR  H TA D+PE  + S+
Sbjct: 61  LNSHTFVFIVFHAMLFVVYSLSHLTDNNSGSNRTDAESTLDARSSHVTADDSPESLIASK 120

Query: 121 EDSVDEILVVGEKNTAPTLEILPSPVDESLVGEENMAKSPVDVASIGATPVEETTTAP-- 180
           +DSVD+ LVV EKNTA  LE   +PVD+S V E+N  KSPV   SI  T    TTTAP  
Sbjct: 121 DDSVDDKLVVDEKNTATALENSAAPVDDS-VAEKNTEKSPVSKDSIDPT---TTTTAPTP 180

Query: 181 --------LPETRRYRKTESERFKGNREKGKLRRSMTAIQWESGGEAARFLKWVDEMDIE 240
                   +PETR+YR+TESERF+ NR++ KLRRS T I+ E   E+ +    V+EMDI+
Sbjct: 181 GSPVLHLIIPETRQYRRTESERFEENRQRAKLRRSKTEIRREESRESTKLRDSVEEMDID 240

Query: 241 DFNRTVESFIAEQKLHIGGKIS 249
           DFNR VE FIAEQKLHIGG+IS
Sbjct: 241 DFNRKVERFIAEQKLHIGGRIS 258

[Close]

BLAST of Sed0026562 vs. NCBI nr
Match: KAG7020495.1 (hypothetical protein SDJN02_17180, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 274.2 bits (700), Expect = 1.1e-69
Identity = 160/262 (61.07%), Postives = 189/262 (72.14%), Query Frame = 0


Query: 1   MVLRKFDSIK----GNCGRRRKLKRLVEFFVFLFLVFHWSSFFSLAGPVFRHFFRRLLLV 60
           MVL  FDS+K     N GRRRKLK L EF +FLFLVFH SS FSLAGP FRHFFRR+L+V
Sbjct: 1   MVLNGFDSVKAISMANSGRRRKLKWLFEFIMFLFLVFHRSSLFSLAGPFFRHFFRRILVV 60

Query: 61  LNSHIFVFLVFHAMLFLVHTLSHLTDNKPGSNRTDTESGTNARFPHATAGDAPEISVPSR 120
           LNSH FVF++FHAMLF+V++LSH TDN  GSNRTD ES  +AR  H TA D+PE  + S+
Sbjct: 61  LNSHTFVFIIFHAMLFVVYSLSHSTDNNSGSNRTDAESTLDARSSHVTADDSPESLIASK 120

Query: 121 EDSVDEILVVGEKNTAPTLEILPSPVDESLVGEENMAKSPVDVASIGATPVEETTTAP-- 180
           +DSVD+ LVV EKNTA  LE   +PVD+S V E+N  KSPV   SI  T    TTTAP  
Sbjct: 121 DDSVDDKLVVDEKNTATALENSAAPVDDS-VAEKNTEKSPVSKDSIDPT-TTTTTTAPTP 180

Query: 181 --------LPETRRYRKTESERFKGNREKGKLRRSMTAIQWESGGEAARFLKWVDEMDIE 240
                   +PETR+YR+TESERF+ NRE+ KLRRS T I+ E   E+ +    V+EMDI+
Sbjct: 181 VSPVLHLIIPETRQYRRTESERFEENRERAKLRRSKTEIRREESRESTKLRDSVEEMDID 240

Query: 241 DFNRTVESFIAEQKLHIGGKIS 249
           DFNR VE FIAEQKLHIGG+IS
Sbjct: 241 DFNRKVERFIAEQKLHIGGRIS 260

[Close]

BLAST of Sed0026562 vs. NCBI nr
Match: XP_023002474.1 (uncharacterized protein LOC111496300 [Cucurbita maxima])

HSP 1 Score: 269.2 bits (687), Expect = 3.5e-68
Identity = 160/262 (61.07%), Postives = 190/262 (72.52%), Query Frame = 0


Query: 1   MVLRKFDSIK----GNCGRRRKLKRLVEFFVFLFLVFHWSSFFSLAGPVFRHFFRRLLLV 60
           MVL  FDS+K     N GRRRKLK L EF +FLFLVFH SS FSLAGP FRHFFRR+L+V
Sbjct: 1   MVLNGFDSVKAISMANSGRRRKLKWLFEFIMFLFLVFHRSSLFSLAGPFFRHFFRRILVV 60

Query: 61  LNSHIFVFLVFHAMLFLVHTLSHLTDNKPGSNRTDTESGTNARFPHATAGDAPEISVPSR 120
           LNSH FVF+VFHAMLF+V++LSHLTDN  GSNRT+ ES  +AR  H TA ++PE  + S+
Sbjct: 61  LNSHTFVFIVFHAMLFVVYSLSHLTDNNSGSNRTEDESSLDARSSHVTADNSPESVIASK 120

Query: 121 EDSVDEILVVGEKNTAPTLEILPSPVDESLVGEENMAKSPVDVASIGATPVEETTTAP-- 180
           +DSVD+ LVV +KNT   LE L +PVD+S V E+N  KS V   SI  T    TTTAP  
Sbjct: 121 DDSVDDKLVVDKKNTT-ALENLAAPVDDS-VAEKNTEKSSVSKDSIDPT----TTTAPTP 180

Query: 181 --------LPETRRYRKTESERFKGNREKGKLRRSMTAIQWESGGEAARFLKWVDEMDIE 240
                   +PETR+YR+TESERF+ NREK KLRRS T I+ E   E+ +    V+EMDI+
Sbjct: 181 GSPVLHLIIPETRQYRRTESERFEDNREKAKLRRSKTEIRREESRESKKLTDSVEEMDID 240

Query: 241 DFNRTVESFIAEQKLHIGGKIS 249
           DFNR VESFIAEQKLHIGG+IS
Sbjct: 241 DFNRKVESFIAEQKLHIGGRIS 256

[Close]

BLAST of Sed0026562 vs. NCBI nr
Match: KAA0065217.1 (uncharacterized protein E6C27_scaffold82G005550 [Cucumis melo var. makuwa])

HSP 1 Score: 218.0 bits (554), Expect = 9.1e-53
Identity = 137/261 (52.49%), Postives = 171/261 (65.52%), Query Frame = 0


Query: 1   MVLRKFDSIK-------GNCGRRRKLKRLVEFFVFLFLVFHWSSFFSLAGPVFRHFFRRL 60
           MVL  FDS+K       GN  RRRKLK L EFFVFLFLV + SSFFSLAGP+  HFF+R+
Sbjct: 1   MVLNGFDSVKALKAISIGNYSRRRKLKWLFEFFVFLFLVSNRSSFFSLAGPILHHFFQRI 60

Query: 61  LLVLNSHIFVFLVFHAMLFLVHTLSHLTDNKPGSNRTDTESGTNARFPHATAGDAPEISV 120
           L VLNSHIFVF+VFHAMLF+V++LSHLTDNK GSNRT+ +S  +          AP + V
Sbjct: 61  LAVLNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRTEPDSSESL--------VAPPVDV 120

Query: 121 PSREDSVDEILV----VGEKNTAPTLEILPSPVDESLVGEENMAKSPVDVASIGATPVEE 180
              E S +E+ V    + E     T E++ + VD++ V   +   SPV   +      E 
Sbjct: 121 SVEEKSTEEMPVIEDSIAEAPAEETTELVITAVDDTAVLPPS---SPVRHLN-----AEM 180

Query: 181 TTTAPLPETRRYRKTESERFKGNREKGKLRRSMTAIQW-ESGGEAARFLKWVDEMDIEDF 240
                +PE +RYR+TESERF+ NREK K RRS T I+W  +  E   F+  VDEMDI+DF
Sbjct: 181 EAAEIIPEEKRYRRTESERFEENREKSKFRRSKTEIRWRNTTAELTGFVDLVDEMDIDDF 240

Query: 241 NRTVESFIAEQKLHIGGKISG 250
           NRTVESFIAEQK+HIGG++SG
Sbjct: 241 NRTVESFIAEQKMHIGGRVSG 245

[Close]

BLAST of Sed0026562 vs. NCBI nr
Match: XP_022144151.1 (uncharacterized protein LOC111013908 [Momordica charantia])

HSP 1 Score: 207.2 bits (526), Expect = 1.6e-49
Identity = 135/265 (50.94%), Postives = 167/265 (63.02%), Query Frame = 0


Query: 1   MVLRKFDSIK----GNCGRRRKLKRLVEFFVFLFLVFHWSSFFSLAGPVFRHFFRRLLLV 60
           MVL  FDS+K    GN  RRRKLK L E  VFLFL+   S++FS A PV RHFFR+L+ V
Sbjct: 1   MVLNGFDSVKAIPMGNFTRRRKLKWLFELSVFLFLISRRSTWFSFAVPVLRHFFRQLVAV 60

Query: 61  LNSHIFVFLVFHAMLFLVHTLSHLTDNKPGSNRTDTESGTNARFPHATA-GDAPEISVPS 120
           LNSHIFVF+ F+ MLF+V++LS LT+ KP SNR+D      A   H  A G++PE  V  
Sbjct: 61  LNSHIFVFMFFNVMLFVVYSLSGLTETKPASNRSD------AAHSHGNATGESPESLVAP 120

Query: 121 REDSVDEILVVGEKNTAPTLEILPSPVDESLVGEENMAKSPVD------------VASIG 180
            +DS+ EILVV EKN      ++ SPVD   +     A+ P +              +  
Sbjct: 121 SDDSIAEILVVAEKN------VVTSPVDGVAIAATPAAELPTEQMPFPSPSPPPIXPAPN 180

Query: 181 ATPVEETTTAPLPETRRYRKTESERFKGNREKGKLRRSMTAIQWESGGEAARFLKWVDEM 240
           +T V E     +PET++YR+TESERF   RE+ K RRS T I+ ES  E ARF++ V EM
Sbjct: 181 STSVTEAAEEIIPETKQYRRTESERFAERREENKFRRSKTEIRRESSEEPARFVRSVHEM 240

Query: 241 DIEDFNRTVESFIAEQKLHIGGKIS 249
           DIEDFNRTVESFIAEQKLHIG  IS
Sbjct: 241 DIEDFNRTVESFIAEQKLHIGRWIS 253

[Close]

BLAST of Sed0026562 vs. ExPASy TrEMBL
Match: A0A6J1KQJ8 (uncharacterized protein LOC111496300 OS=Cucurbita maxima OX=3661 GN=LOC111496300 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.7e-68
Identity = 160/262 (61.07%), Postives = 190/262 (72.52%), Query Frame = 0


Query: 1   MVLRKFDSIK----GNCGRRRKLKRLVEFFVFLFLVFHWSSFFSLAGPVFRHFFRRLLLV 60
           MVL  FDS+K     N GRRRKLK L EF +FLFLVFH SS FSLAGP FRHFFRR+L+V
Sbjct: 1   MVLNGFDSVKAISMANSGRRRKLKWLFEFIMFLFLVFHRSSLFSLAGPFFRHFFRRILVV 60

Query: 61  LNSHIFVFLVFHAMLFLVHTLSHLTDNKPGSNRTDTESGTNARFPHATAGDAPEISVPSR 120
           LNSH FVF+VFHAMLF+V++LSHLTDN  GSNRT+ ES  +AR  H TA ++PE  + S+
Sbjct: 61  LNSHTFVFIVFHAMLFVVYSLSHLTDNNSGSNRTEDESSLDARSSHVTADNSPESVIASK 120

Query: 121 EDSVDEILVVGEKNTAPTLEILPSPVDESLVGEENMAKSPVDVASIGATPVEETTTAP-- 180
           +DSVD+ LVV +KNT   LE L +PVD+S V E+N  KS V   SI  T    TTTAP  
Sbjct: 121 DDSVDDKLVVDKKNTT-ALENLAAPVDDS-VAEKNTEKSSVSKDSIDPT----TTTAPTP 180

Query: 181 --------LPETRRYRKTESERFKGNREKGKLRRSMTAIQWESGGEAARFLKWVDEMDIE 240
                   +PETR+YR+TESERF+ NREK KLRRS T I+ E   E+ +    V+EMDI+
Sbjct: 181 GSPVLHLIIPETRQYRRTESERFEDNREKAKLRRSKTEIRREESRESKKLTDSVEEMDID 240

Query: 241 DFNRTVESFIAEQKLHIGGKIS 249
           DFNR VESFIAEQKLHIGG+IS
Sbjct: 241 DFNRKVESFIAEQKLHIGGRIS 256

[Close]

BLAST of Sed0026562 vs. ExPASy TrEMBL
Match: A0A5A7VDR7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005550 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 4.4e-53
Identity = 137/261 (52.49%), Postives = 171/261 (65.52%), Query Frame = 0


Query: 1   MVLRKFDSIK-------GNCGRRRKLKRLVEFFVFLFLVFHWSSFFSLAGPVFRHFFRRL 60
           MVL  FDS+K       GN  RRRKLK L EFFVFLFLV + SSFFSLAGP+  HFF+R+
Sbjct: 1   MVLNGFDSVKALKAISIGNYSRRRKLKWLFEFFVFLFLVSNRSSFFSLAGPILHHFFQRI 60

Query: 61  LLVLNSHIFVFLVFHAMLFLVHTLSHLTDNKPGSNRTDTESGTNARFPHATAGDAPEISV 120
           L VLNSHIFVF+VFHAMLF+V++LSHLTDNK GSNRT+ +S  +          AP + V
Sbjct: 61  LAVLNSHIFVFMVFHAMLFVVYSLSHLTDNKSGSNRTEPDSSESL--------VAPPVDV 120

Query: 121 PSREDSVDEILV----VGEKNTAPTLEILPSPVDESLVGEENMAKSPVDVASIGATPVEE 180
              E S +E+ V    + E     T E++ + VD++ V   +   SPV   +      E 
Sbjct: 121 SVEEKSTEEMPVIEDSIAEAPAEETTELVITAVDDTAVLPPS---SPVRHLN-----AEM 180

Query: 181 TTTAPLPETRRYRKTESERFKGNREKGKLRRSMTAIQW-ESGGEAARFLKWVDEMDIEDF 240
                +PE +RYR+TESERF+ NREK K RRS T I+W  +  E   F+  VDEMDI+DF
Sbjct: 181 EAAEIIPEEKRYRRTESERFEENREKSKFRRSKTEIRWRNTTAELTGFVDLVDEMDIDDF 240

Query: 241 NRTVESFIAEQKLHIGGKISG 250
           NRTVESFIAEQK+HIGG++SG
Sbjct: 241 NRTVESFIAEQKMHIGGRVSG 245

[Close]

BLAST of Sed0026562 vs. ExPASy TrEMBL
Match: A0A6J1CSG5 (uncharacterized protein LOC111013908 OS=Momordica charantia OX=3673 GN=LOC111013908 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 7.8e-50
Identity = 135/265 (50.94%), Postives = 167/265 (63.02%), Query Frame = 0


Query: 1   MVLRKFDSIK----GNCGRRRKLKRLVEFFVFLFLVFHWSSFFSLAGPVFRHFFRRLLLV 60
           MVL  FDS+K    GN  RRRKLK L E  VFLFL+   S++FS A PV RHFFR+L+ V
Sbjct: 1   MVLNGFDSVKAIPMGNFTRRRKLKWLFELSVFLFLISRRSTWFSFAVPVLRHFFRQLVAV 60

Query: 61  LNSHIFVFLVFHAMLFLVHTLSHLTDNKPGSNRTDTESGTNARFPHATA-GDAPEISVPS 120
           LNSHIFVF+ F+ MLF+V++LS LT+ KP SNR+D      A   H  A G++PE  V  
Sbjct: 61  LNSHIFVFMFFNVMLFVVYSLSGLTETKPASNRSD------AAHSHGNATGESPESLVAP 120

Query: 121 REDSVDEILVVGEKNTAPTLEILPSPVDESLVGEENMAKSPVD------------VASIG 180
            +DS+ EILVV EKN      ++ SPVD   +     A+ P +              +  
Sbjct: 121 SDDSIAEILVVAEKN------VVTSPVDGVAIAATPAAELPTEQMPFPSPSPPPIXPAPN 180

Query: 181 ATPVEETTTAPLPETRRYRKTESERFKGNREKGKLRRSMTAIQWESGGEAARFLKWVDEM 240
           +T V E     +PET++YR+TESERF   RE+ K RRS T I+ ES  E ARF++ V EM
Sbjct: 181 STSVTEAAEEIIPETKQYRRTESERFAERREENKFRRSKTEIRRESSEEPARFVRSVHEM 240

Query: 241 DIEDFNRTVESFIAEQKLHIGGKIS 249
           DIEDFNRTVESFIAEQKLHIG  IS
Sbjct: 241 DIEDFNRTVESFIAEQKLHIGRWIS 253

[Close]

BLAST of Sed0026562 vs. ExPASy TrEMBL
Match: A0A0A0LNN4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G361830 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 6.6e-49
Identity = 134/261 (51.34%), Postives = 172/261 (65.90%), Query Frame = 0


Query: 1   MVLRKFDSIK-------GNCGRRRKLKRLVEFFVFLFLVFHWSSFFSLAGPVFRHFFRRL 60
           MVL  FDS+K       GN  RR KLK L EFFVFLFLV + SSFFSLAGP+   FF+R+
Sbjct: 1   MVLNGFDSVKALKVISIGNYIRRWKLKWLFEFFVFLFLVSNRSSFFSLAGPILHRFFQRI 60

Query: 61  LLVLNSHIFVFLVFHAMLFLVHTLSHLTDNKPGSNRTDTESGTNARFPHATAGDAPEISV 120
           L+VLNSHIFVF+VFHAMLF+V++LSHLTDNK GSN T+ +S  +          AP + V
Sbjct: 61  LVVLNSHIFVFMVFHAMLFIVYSLSHLTDNKSGSNLTEPDSSESL--------VAPPVDV 120

Query: 121 PSREDSVDEILVVGEKNTAP----TLEILPSPVDESLVGEENMAKSPVDVASIGATPVEE 180
              E S +E+ V+ +    P    T E++ +  D++ V    ++ SP  V  + A  V E
Sbjct: 121 SVEEKSTEEMPVIQDSIAEPPAEETTEMVITAADDTAV----LSPSP-PVQHLNA--VME 180

Query: 181 TTTAPLPETRRYRKTESERFKGNREKGKLRRSMTAIQW-ESGGEAARFLKWVDEMDIEDF 240
                + E +RYR+TESERF+ N+EK K RR  T I+W ES  E   F++ VDEMDI+DF
Sbjct: 181 AAEI-IAEAKRYRRTESERFEENQEKRKFRRWKTEIRWRESREELTGFVELVDEMDIDDF 240

Query: 241 NRTVESFIAEQKLHIGGKISG 250
           NRTVESFIAEQK+HIGG++SG
Sbjct: 241 NRTVESFIAEQKMHIGGRVSG 245

[Close]

BLAST of Sed0026562 vs. ExPASy TrEMBL
Match: W9SC28 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_021937 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 2.6e-05
Identity = 73/242 (30.17%), Postives = 114/242 (47.11%), Query Frame = 0


Query: 15  RRRKLKRLVEFFVFLFLVFHWSSFF-SLAGPVFRHFFRRLLLVLNSHIFVFLVFHAMLFL 74
           R RK K  +E    LFL+ H S+++  +AG       R ++ V  SH+FVF +F+A++  
Sbjct: 51  RERKFKWFLEACAVLFLLAHSSAYWLPIAGEFSGDLLREIVSVFRSHLFVFALFNAIIVA 110

Query: 75  VHTLS---HLTDNKPGSNRTD------TESGTNARFPHATAGDAPEISVPSREDSVDEIL 134
           V+ LS   H++ N  GS + D      T S +  R P       PE + P+ E +V    
Sbjct: 111 VYALSGKIHIS-NDAGSEQPDLYDEFVTNSESVRRIPAVNDSPPPE-TCPAEEKTVS--- 170

Query: 135 VVGEKNTAPTLEILPSPVDESLVGEENMAKSPVDVASIGATPVEETTTAPLPETRRYRKT 194
              E   A T      PV+     + N  K   +V+    T  E+         + Y +T
Sbjct: 171 --SENADAST------PVENRNDAKRNPKKP--EVSDCDCTNNEKAL------VKSYERT 230

Query: 195 ESERFKGNR---EKGKLRRSMTAIQ---WESGGEAARFLKWVDEMDIEDFNRTVESFIAE 241
           +S RF+  R    + + RRS T +       G E A+  + V+++  E+FNRT+E+FIA 
Sbjct: 231 QSVRFERKRMDQSQREFRRSYTDVYRKLTSCGEEEAKKSRKVNQLSNEEFNRTIEAFIAA 271

The following BLAST results are available for this feature:

BLAST of Sed0026562 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6585580.1	4.8e-70	61.45	hypothetical protein SDJN03_18313, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7020495.1	1.1e-69	61.07	hypothetical protein SDJN02_17180, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023002474.1	3.5e-68	61.07	uncharacterized protein LOC111496300 [Cucurbita maxima]	[more]
KAA0065217.1	9.1e-53	52.49	uncharacterized protein E6C27_scaffold82G005550 [Cucumis melo var. makuwa]	[more]
XP_022144151.1	1.6e-49	50.94	uncharacterized protein LOC111013908 [Momordica charantia]	[more]

BLAST of Sed0026562 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0026562 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KQJ8	1.7e-68	61.07	uncharacterized protein LOC111496300 OS=Cucurbita maxima OX=3661 GN=LOC111496300...	[more]
A0A5A7VDR7	4.4e-53	52.49	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A6J1CSG5	7.8e-50	50.94	uncharacterized protein LOC111013908 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A0A0LNN4	6.6e-49	51.34	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G361830 PE=4 SV=1	[more]
W9SC28	2.6e-05	30.17	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_021937 PE=4 SV=1	[more]

BLAST of Sed0026562 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..99
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..113
None	No IPR available	PANTHER	PTHR33640	TRANSMEMBRANE PROTEIN	coord: 17..240
None	No IPR available	PANTHER	PTHR33640:SF3	TRNA-METHYLTRANSFERASE NON-CATALYTIC SUBUNIT TRM6MTASE SUBUNIT	coord: 17..240

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0026562.1	Sed0026562.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane