Sed0026554 (gene) Chayote v1

Overview
NameSed0026554
Typegene
OrganismSechium edule (Chayote v1)
DescriptionRibonuclease T(2)
LocationLG04: 10970186 .. 10981423 (-)
RNA-Seq ExpressionSed0026554
SyntenySed0026554
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCCGACGAGATTTCTTCGTCTTTGCGCCGATTCAACAAGTCCTTCTCTTCATTCTGCCCGACGAGCCTGCAAAAAGGTTATTATTTTTTTGTTTAAACAACGAAACATTTTGAACGAATCGTACGATCTAAACTACGTTTCATTCGATTTACGATTCAGATCCACGATTCACATATTTTCTAAATGGCTCTATATATCAACTTTAATATACTTCATGAATAGCTTATAGGAAATCACCTACTACTAGTTTTCTGTACATTAAGTATAATACAAATTAGATTCTTAGTTAAATTAAGAGTTTAAAGTGCATATTACGTTTTAGGTTAAATTACGAGTTTAGTGATTAAAATATATGCTTATCTAATTTTGAACTTTAAAAGTGTTTTTTAGTTTGATTTTTTTTTAATGAATTCGTGCCTAATAAATCTTTAAACTTTCAATTACTTAACATTTTTTTAGTTTAACCATGATTCAAGAATCAAATTTGTGATCTCCTTAGCATGAACACCTATTTTATGTCAATTTAACTATGTTTTTATTGACGGTTTACTCCGAACTTTCAATTGTGTAGGTAATATATTATTGAAATGTTAAAAGTTCAAAAATGGGTATAAAACTAAATTTGATGTTTAACATTACCTTTTGCCTAAGCCAGTGTATCATTAGTTGGCATATATGTGGTGTGAATTTTAAAATGACTCGCACTTGAATTTCTTTAGGAGGACAATGAAAGACCACAAAACTATTAATCTCTGCCGTAGCGCCAATCTGGCTGATAATCAATGGAAACACAATCGGAATCAGCACCGTTACAACAGACAACAAGAAAAGTTCATAAAAGCTCCATCCCACAATCGACGCCTTTTCCCCATGCCCTCCGATACACTTCCCTCGCCCTCCCAGCTTCGTTGCAGTGCAACAATGCCGCGTTCTGGATCTCCGATGGCGGCTTTGGTTTGGGGCTCTGCTCAGCCATCATGGTGTTCGATGAAATGTTGGGCAATTTTGGTGCTGAGAGGGATTTAAAATGGGGGATTATTGTTTTGGTGAGGCTATTGCAGCTGTAGAGGAGCAGGAGATTCAAAGAAGATTGAAAGAGTAGTTTTCGATATGTTTTGCGATGAACAATGGTGGCCATGGGTACGTTTGCTGGCATCTTTCTTCATATTCTTCTTTCATTGTCTATGCTCTATCTCTCTGTTCACCTTGTTCTTTTTTTAATAAGTGATAAATAAATTTAACAAAATCCACTAAACTTTTTTTAATAAGTGACAAATAAATTTAGCCATTTTTGGGCCGGTTTGACCATGTTTCTTCATTTTTTACTTTGTATTATATTTTTTATTAAAAAATGTGTTATATGATATACAAAATCTATAATACAAATGTCCAAATTTAACATTTTAAAGATCCAAAAAAAAAAAAAAAAATTTAAAACACAAATATACCTATTGTAAAATTAAGAAATAAATATGATATAGATATCAATGTAAATAAAAATAAAAATGGATATGGATATTGTAACACCTCTAAAATCTGAATCTCACCATCTAGTTCGAGAAATATCTCACGTTGCCCAACAACGCCATAAGCAAGTCTTGCTCCTTCATCTTGTGCTGAATTGCAAGGGCAAAGCAAAAAAGTATAGCGAGTCAGAATAAAAATATTAAGTAGCTTAGCTTATCATTAAAACCACACATCGTCCACTTAATTTATCGTAATTGTAACTAATAATTGCTCTCTAATCATATGGTCCTAATCTCAAACCTTGATTCCACAAAGTACTAATATACAATGTTAAGCTTAAACTGTTGGGGCTTGCAGAACACTCTATGTTACTTGCAACATAATGAAGTAAAGGTACAAGCCCTTTACTCTCTACCATTCAGCTGATAGTCTGAAATGAATTTCCTCACAACGTTATCTGGCGACCCCTTAATCTTCCAAACACATACTAATATTTAATGGTGGGCATGACCCTACAACATACCCTTCATGATAACCCATGAAACAGTGCCAACCCCCGCCCCAATTCAGGGAGCAACCTCATACTGCACAGTGAGGGATAACATCACCTTCAAGTTCCCTTCTTTAACTTCTTAAATCCTTTCGTTACTTAGACCACCTAAGTCTTTCTTAATGATGACATCATTCTTGCACCTAAAATATACTCTCTAGCACTTAGGCTCAAGCTCCACCCCAAACTCTACTCACCTATCGACACCTATTTCTCGATCATCAAATTATAACAAGTTAGAAGATTACTCAGTTATTCCTAAACTTAACCTTAATTGTTGGATTCTATGCCACAGTGTCATTTACCACCTCACACTCACTAGCCACCAGAGCCTTAGAAGACTCCAATATAAGTAGTCAAGACCATATGCACCACCCCTTGAATTAAAGAATCCACCCTAGTTTAGCTACATGATCACTAGAACTTTATGCAAGTAAGTCATGTCCAGATCTGATCCCAAAAACTGAAAGGTTTAAAAAAAGAACATCCACAACTAACTAATAGGATACATATAAGTACTTGAAAATTAAACTTGTTATGTACCATATAAGTACCATAACTCAAAGAATCGTGACTACTATGTTACCATATCATTGCGTTCGCTACTACTTATTGAACATTGAAGAGCTAACTAAAGACATTGTATGCACAAGCTTTCCCATTCAGACCCTTAGAAATCCTACTTTCCACTTGCAAACAAGCATGATAACAATAACTCTTACTCACCACATCAGGCAACAAAATATCGAAGATGTTTGCCAACCTTCCAGTAACCTACTATGGGGTTCCAAAAAATCTAGCTCATCCGAGCTTAACTACTTAAATCTCTTCCATTGTTACTCACGAGAAATTTACCTTTCCTCTATGCAACATGACAAAAACGTAATAATTATGCAACAATTCTAAACTTGAGTTGCATAAATAAACTAACTTCTGGTATACAATCACAAGGAATACTAAATTCCAAAAAAACTCAAAAATTCATTTGACAATATCAAAGAAGGAAAAATTATAAAACACTCATAAATTTTTGACTAACGCTACACTGGTTGAAAAATTAGCTTTGATTGTCCAACACATTTCCAAAGCATCTCAACCAAATGCAAACACTAGAAACAAACCCTACATAACACATTTCTCAATCAACTTGAAATCAACGGTTGCATGCATGAGCGATCAATCGAGAAACAACCACGACCAGTGTTTCAAAAATCGTTTGAGGCGGAGAGAAAATTCCTCGAGGCTTAAGTCTCATAAGGGAAAATTGAGGCAGCCGTCTCATAAGAGAAAGGCGTACGCTTTGCGCCTCAAGGCGTACGCCTCTCCGTCAAATTGCCTTTTATTTTCAAATTAGGGCTGGAAGTTTAAATTAAATGTAAAATCTTTTTATCCAGATAGTGGGCCATTCAAATAGGCCCATATTACATTTTAAAAATTATTTATTGGTTGACCTAAAAGCAAAGTGACTTGCAACTGAAAACAAAAGGTCAAAAACAATATTCGATATGATAACGACTCTATGGATGATCCCATTAGTGATAGTGAAAATGATAGTGATTTTCTGGATGATCTTTAGAACTCAATAGTGATCGACTGGTTAGATTTTTTTATAGCGACATTTATATTGAGTTTTTTTGTGTAGTTTTAAGGAGTATTACCTAGTTTAAATACAAAATGTTTTATCTTTTTTTTGGGATAAGAAACAATTTCATTGATAATATGAAATTACAAAATAACATAGTTCTTTATAATAAAGATCTCCAATTGTTAATAAGAATATCGTAACTATAATCATGAAATAATGGAGACATTTTACACCAAGATACCACCATATAAGTAATATTGTCTATGAACCGGTCGAAGTGATTAGATGTTCCTTTAAAGATCCTGCGATTTCGCTCGAGCCAAATATTCCAACAATATGCTTTGATAAAGTTTTCCCATAAAGATTTTTTCTTTTCTTCTTTGAATGGGTGGTTCGTAAGGGATAATATAAGGAGCTCGTGTGGATCATTCGGCATGACCAAATACCAAGAGAATGCCCCCCGAATAAAATCCCAAAATACATTTGCACAAGTACAAGATATCATTAGATGTGGTTGAGTTTCAATGGATTTATAACAGATGGTACACCATTGCGGAGAGAGAGTCATATGTGGGAGTCTACGTTGGAGCCGATCATTGGTGTTTGATGGCCCCATGACTCAATTCCCAAAGGAAGAAATTCACCTTTTTCGGGCATTTCCCTTTCCAAATAGAACTATAAATCTGAACCTCATGTATTGTTGTAGATGCGATAGCTTTAAGATCTTTGAGAAGGGAATGGACAGTGAACTTTCCACTAGGTTCCAGGTTTCATATACAACAGTCCCTACCCTCAGCCAGAGCCATTCCATCGAGCTGGTTCTGAAGAGAACAAAATTCATCTAGTTCATCATCTTTCAGGTTCCTTCTGAGCCTCAAGTTCCATATTTTCCTTTCATCCTCCCATGCCTTACTAACAACCTTATCTTTTTCTTTGGTGATGTGGAAAAGAAGAGGGAATGCATGGTTGAGAGGGGAGTCATTAAGCCATTTATCCTTCCAAAAAAGAGTGCTCTCACCATTCTTCACTTTATAAGAGATTCGATCTTGAATCATGGGAGCAAGAGGAAGGATGTACTTCCATGGACCTTTAGTCGATGCCAATGTTGCCTTTCTCGATCTATTGTTAAAATGACATGTGCCATACTTGTCATCAATCACTTTCCTCCATAGAGCTTGATCTTCAACATAATATCTCCAAATCCACTTTGTAAGAAGGGCCTCGTTCTTGGGTTTGATTTTGTCAATATCAAGGCCCCCTTGTAAATGTGGGAGGGTAATAGTACCCCATTTAACGAGATGCATACCTTTATCTTCAATACTCCCCTTCCAGAGGAAGTTTCTAATCAATCTTTCCAAGGTAGTTACAACTCTACTAGGCATTTTAAACACTGACATAAAGTATGTGGGGAGATTAGCAGGAGTGGCTTTGGTGAGAGTCAACCTTCCTCCCTTCGATATATGCTGATTCTTCCAAGATAAGATCTCTTTTCCACTTTCTGTAGCATTGACTCCCAAAAAACATTGGAATTAGGATTACCATTGAGAGGGAGGCCCAAATAGGTTGTTGGCCATGAGCCAAGCTTACATCCATATTGTTTAGAAAGCAAATCCAGGTCAGCTTCGTCAATGTTCAGCCCGAGTAACTTTGTTTTGTTAAAGTTGATGTTAAGCCCTGATACTTGTTCAAAAGTTGCAACTATTTGAAAGAGAGCATCAATGGCATCCACATTATAGTCTGACAAAAAGGAGTGTATCATCTGCAAACTGTAGATGAGTAAGGCTAGGGACCTTGGTACCAATGTGTATCATCTGCAAACTCTACTAGGCATTTTATCTTTCTTTAAATTTTTAAATGAGGCTGACGCCTCATTACGTCTCAAGGCTTATGCCTCGCCCCTTCCAAAGAAAACACCTCGGGGCCACCTCATGCCTTTTAAAACATTGACCACAACAAGAAAAAGATGCTAGTCAACACCAAGCTATGTGGTGAGAAGAAACTAGAACGATGGCATGAATGCCATCCGAGAGATTATCTAACACCAATGACATGCTCTACTAACAAACAACTTTCTACCATTTAACTGATAGTCTGAGATGAATCCCCTCACATCGCTATCTGGCGACCCCTTAGTCTCCCAAATGCATACTAATATCTAATGGTGGGCATCACCCTACTACATACCCTTCATGATAACCCATGAAATAGTGCCAACCACCACCCTCTAATTTAGGGAGCAACCTCATATTGCATAGCGAGGGACAACATCACCGACTACGAAGGAAACTTGAGTACCTTCAAGTTCCCTTATTTAACTTCTTGAATCCTTTCGTTATTTAGACCACCTAAGTCTCTCTTAACGATGACATCATTCTCGCACCTAAAATATACTCTCTAGCACCTAGATTCAAGCTCCACCCCAAACTCTACTCACCTATCGATACCTATTTCTCGATCATCAAACTATAATAAGTTAGAAGATTACTCAGTTAAGGATATGCTCCCCTCAAGGTCCTAGGTTCGAAACTTAGCTGTGACATTACTGATTCAATGTCTTCTGATGTCTGGTCTAGGGACGGGCGTGGTTACCCTTGTTTCAAAAAAAGAAGATGACTTCAGTTATTCCTAAACTTAACCCTTGATTGTTGGATTCTATGCTGTAGTGTCATTTACCATCTTACACTCACTAGCCACCAGAGCCTTAGAAAACTCCAATATAAGTAGTCAAGACCATATACACCACCCTTCGAATTAAAGAATGCACCCTGGTTCAGCTATATGTGTTCCCAAAAAATGAAAGGTCTCAAAAGAGGACATCCACAACTAACGAATATGATACATGTCCTATTGAAGATGGATTACACATAATCCTCTCATTAATCAAACCTAAACTATTATATTATGCCAGCAAATACATCACATGCTTTTGTTCTAGTCTTGTATAAAACCCAAATATAACTCGCATTTGTCACGCTTATAAGAACGACCCCAGCTGCAGCTACGATTGGTAGAGATAACCATTAAATACAACCAACTCCCATTATATCAACTTGCATGATAAATAAATCTCAGGCTCAACCTACTAATGTAACCATGCCCTCAACTGACATAACCCAATCTATAATGAATAGTATTCAAGAATAAAGCTCTCTAGCTACGTACTAGGTTAAAGCTCGAGAAACGCAAGCCCATCGAGAACTTGACAAGCTTGAAATTGACCTTCATAAGGAGGGGCTTCATCAGCATCCATAATTCAGACTACACACTTTCTTGGAGGCTTAAAAGAAAATAGACCAAAAAAACGTTGGAATTTAAACAAGAAATTTGGTATAAACCGACCTCCTTGGAAGCCAAACTTAAATCCCCAAAACTTACCGAAAATCACTCAATGGTGGTAATCTCTGCAGCTGGTTCGAAGAAAACCGAGCCACAACAGCTCAACGGCTCACACCGAAGTTTGAACAGCCGTCGCTGAAAACTCAGTGAAACAGGTGTCAAAACTGCTTCCCTCGGGACTCATAATATATCAAAAGAAAGATGAGAAGCACACGAATCTAATGCAACAAAAATCGTGCGATTCCGAGCTTAAACAAGAAAGTTATGCCCTGTCAAAATTTTATTGGAAAATCGCCAAAAATCTTGAGAGGGAGACGATGATGACACCATTTTCACCCAAGAAGTGGCATTAAATTGATGCTGAATCACTTAGTCAATATTGACTTTTAACTTCATTGAAAAAAAAGAAATGGTATCTTATAAATATGAATATAATATAAAATAAATCTTTAAATATTACTTATATCTATAAATTTTCTTGAAGTAAAATATGAATTTAGTCTTAATAGTTTGAAAAACAAATTGTTTAGTCTTTGAAAAAATTTAGAATTTAGTTCTACGATTTGAAAAAATCTAAAAATTAATATTTGTTATTTCTAGTCATTGTCGAATTAAGTATTTAAAAATCGATTATTCAGGCATTAATAGTGAGTTTTTATATACTTATTAATACAATAACGATCACATGACAAGAACTATGTTTTATCGAGGGTTAGTGGCGCAGTTGATTATCTTGTTTGGTATTAATCCATTTCAAGTCCACAGTTATAAATTTGAGTCCGAAAATCGGTATTCGACTCTTATATTATTTGAGAGTAGTCGTGCCCTGTGTATAGTTTGTTGGTCTCCCTTTTCCTAATTTGTACTAAAAAAATGGGGTTAGATTGTAATTTCCTTCCGATCAAAAAGACAAATTTGTATACTTATAATTTACTTATTTTCTTGTTTTGAAATTTATTTTCTATCCATATTTTTAAAAAATCAGGTTATGTTTTATACTAGTTTTTGTTTCTGAAATTAAGAATCAATGAAAAAAATGCATTTTATTTTAAAAAATAATATATAAAAAATTAAATAATTATTCAATGACATTGTTCAAATGGTCACCGTTAAATTAAAGTTAATAAAATATGAATTTAATTCGTTAAAAAATAAAAGCTCTAGTAGCTCATCGATCTCAATATATACGAGATGCCTGAGAGGTCATGTTTCAAATTTTCTTACTCTAATTGTGGTAGAATTTTTTGAAAAATGTAAAGTTTTAAATAATGGAAGGCTAAATTCAAATACGATTGCCATCAATTTCTTTTTTATTTGAAAATTTAAAGTTAAGGAATAGTTTTTTTCACAAAAAGTAGTGGGAGGAACTAAAAAAAAAAAGGTTGTACTAATGATATTTTAACAGTATTTTCTCTAATTTAATGATATTTTAACCGATTCTTTAATTTATTTATTTTTAGATTAGATAGATAAAAGAAAAAAAAACGAAAAAAGAAAATCGAAATGAGATTATCGTGCCCTTCTTCTTACAACTCCCTAACCTCAAGGTTTAGTGTAGGGTTTGTGAATTCAGAATTCTCAACAGCAGCCATAGCTTCCTTCTGCAACTTCTCGGAGAGCTCCTTCAATGGCGACTGCATTTCTCTTTCGAAGAATTCCAGCGACATTCCTCTTCCAACTTCAACTTCTCCATTCTTATTCTTCTTCGCCGTCAACTTCTCCACTTTTCGGTAACCTCTGTTCTTCTCTTCTCCGAGATTCCGTTTCCTCTAATCCTTTAAACTCTATCTCTTCATACTCAAGAAGTTTCGTCTCTGTTCTTGCAGATTCTGGTTTTCATGCGCTCGCCACCCTGATCATTGGCTTTCTTGGTTCTGGAAAGGTTCTCTTTCTTTCTTTCTTCTTATTTTGTATCATTTTCTTGGTTATTGTTGAGATGCATATATGAACATAGTTTCAACCTCATTCTTGCGTGTGTTGTTGAATCGCATGCTTGTTTATAGTTTACTGATTTGCAAACTGGTCTCTCTGGTTAAGGATTTTTGATATTGACGCTGAGCGATTAGTTTTTGTTATGATACACATTCTTTTTCTTGATGATATGATGCTTTATTCTTGATCGGAAATGTTTCATCGGACCAGTTCCGATGGGCACTTTTTGGTGTTTAAACGAAGGAAGAACTGAAGTCTGTGCTTGTGGCTTAATTACTTATTTACTTGGAGATTTTTCATGTATAGTAAAAAAGGGCAAATTATTTCCATCTATAGCACAAAATCAAAACTAATTTATTGGTTGCAAGAAATCTAAATTAGCTCTATCACCAATATAATTCAATTAGTGCAAGAAAATCATGTGCTATAGATAAATTATTTTTGAAATTATGTTGCAAATGTCATACCAGGTAGAATGTGTTGTTTATAGTAAATTCTCTATTGATTTAATTTTGTTTTCTTTTCTTTGTTTAGACCACTCTCCTCAATCTTATCTTAACATCTGAACATGGCAAGCAGATTTTGGCTCTGCACTCAAACCGACCTGAGTTGACCTGAGCCGTTTATCCCCTTAACAAATACCCATATCTATTAAAAAGTACCTCACAAATAGAATCAATACTCGTGATAACAGTCTCATTTAGGCATAAGAATTTCCATAACTAGGCTACTAGTAATATAAAAGTTAGAAACTTCACTAATTCTTGGTTGGAAGTTGAACATGTACTCAGCTTGGAATAAAAAGATTGACAGTTTTTTGCCTTTTAAAAGGTAAAGGCTGGCATTCACAGACCTGAATTTCAGATCTCTGTGAGTATTCTTATTTATGTCGTCTAGTCTAGTACTAAGGAGGTGTTTGGATGTGGATTTGAAATGAGATGTTATTTTGAGTAGTTAAAAATGTATGATTTGAAATGAGTGGTTTATTTTGAATAATAAAAAAAGAATGATTAGAAATAAGTGGTTAGAAATGAAGAGTTATGTTGAGTAGTTAGAAATGAATGATTAGAAATAAGTAGTTAAGAATAAAAAGTTATTTTTAATGGTTAGAAATGAGTAGTTATTTGGAGTTGTTAGAAATAAGGAGTTGTTTTGAGTAGTTAGGAATGAGAAGTTGTTTTGAGTAGTTATAATATCTGGTGTGCACTACTGTAAAATAAGATTTTATGACGCTACGCTTCTATTGCAGGGGAGTGGACAGGTCTACACTGCTCGATCGTGTAGAAGAAGACCTTCTAGGGCCTCACCTGCGGCCTCTACCCCAAATCCACCTAAACTTATCCTTGGGGAGAATTTCTATCCAGTTTTTCGGAAATACCATAAGGTAATATGCTAAGTATAAATAATGTAACTATTGATGAGAGTTTTATCCAACCAGATTTTATCAAACTATATGGTTGAATGAAATGTACCTTTAAAATCGGACTAAACTCTGTTTTTCTGTTTCAGATTTTTGGCCTGATATTGAGTTTGATGATGTTACCCATGTTTTTCTACCAACCTGTTCAATATGTTAAACCAGAACCTCCAATCCATCTTCGCCTTGTTTACCAGTGGCCTGGCACACTCTGCCACCTGCAACCTTGTCCAAGCGCACCAGTTGGCCCCTATAGATTTACGGTGCATGGCCTTTGGCCGCACATCGGAGCATTGCCACTAATATACTGTCCTTCTAATGAGTGGGACTTACGTGAGGTAATTTGGCCTAGCTAATTTGGCGTTCAAAAACTAAAAATTATAATCTAAATTTTTTTAACATTTTTCAGATTCGACCTTTAAGAGGCCAACTTGACTTTATTTGGCCTAGCTACATTGGAGTATCCAATTCTGCATTTTGGCTTCGACAATGGCGTAAACATGGTTCATGTACTGTTTTTGATCATTGGAGCTATTTTCAAACAGTTATCAATTTGAACAACAATCTAATACCATTCTTACTTGGTCTTGATGCGGGAGGTATAGTCCCGAATTTGCAACTCAAATCCCATTCTGAAGTGTTCAATGCAATTTTTCAAATAAATGAATTTTATCCTCTGCTTAGATGCCGACTGGCGAATGGAGTGCATTACTTGGTAGAAGTTGTAATTTGTTTTGATGAATATGCTACCAACAAGTTACATTGTAATTATCTTGAGTCAAATTGTCCTTTACAATTTGTACTTTGAGATTAGGGTTCTATTGCAAAGATAATCCATATTTTTCAGGTTGTAGTCCTTTATTTTTGAAAGAAGTGTAATGACTCCAACTTTCTCTTGAACCGTCTGAGTTTGAATCTTTAGTTATTGATCATGGAAGAGAATTATTATT

mRNA sequence

CTCCGACGAGATTTCTTCGTCTTTGCGCCGATTCAACAAGTCCTTCTCTTCATTCTGCCCGACGAGCCTGCAAAAAGGAGGACAATGAAAGACCACAAAACTATTAATCTCTGCCGTAGCGCCAATCTGGCTGATAATCAATGGAAACACAATCGGAATCAGCACCGTTACAACAGACAACAAGAAAAGTTCATAAAAGCTCCATCCCACAATCGACGCCTTTTCCCCATGCCCTCCGATACACTTCCCTCGCCCTCCCAGCTTCGTTGCAGTGCAACAATGCCGCGTTCTGGATCTCCGATGGCGGCTTTGGTTTGGGGCTCTGCTCAGCCATCATGGTGTTCGATGAAATGTTGGGCAATTTTGGTGCTGAGAGGGATTTAAAATGGGGGATTATTGTTTTGGTGAGGCTATTGCAGCTGTAGAGGAGCAGGAGATTCAAAGAAGATTGAAAGAGTAGTTTTCGATATGTTTTGCGATGAACAATGGTGGCCATGGGGTTTGTGAATTCAGAATTCTCAACAGCAGCCATAGCTTCCTTCTGCAACTTCTCGGAGAGCTCCTTCAATGGCGACTGCATTTCTCTTTCGAAGAATTCCAGCGACATTCCTCTTCCAACTTCAACTTCTCCATTCTTATTCTTCTTCGCCGTCAACTTCTCCACTTTTCGATTCTGGTTTTCATGCGCTCGCCACCCTGATCATTGGCTTTCTTGGTTCTGGAAAGGGGAGTGGACAGGTCTACACTGCTCGATCGTGTAGAAGAAGACCTTCTAGGGCCTCACCTGCGGCCTCTACCCCAAATCCACCTAAACTTATCCTTGGGGAGAATTTCTATCCAGTTTTTCGGAAATACCATAAGATTTTTGGCCTGATATTGAGTTTGATGATGTTACCCATGTTTTTCTACCAACCTGTTCAATATGTTAAACCAGAACCTCCAATCCATCTTCGCCTTGTTTACCAGTGGCCTGGCACACTCTGCCACCTGCAACCTTGTCCAAGCGCACCAGTTGGCCCCTATAGATTTACGGTGCATGGCCTTTGGCCGCACATCGGAGCATTGCCACTAATATACTGTCCTTCTAATGAGTGGGACTTACGTGAGATTCGACCTTTAAGAGGCCAACTTGACTTTATTTGGCCTAGCTACATTGGAGTATCCAATTCTGCATTTTGGCTTCGACAATGGCGTAAACATGGTTCATGTACTGTTTTTGATCATTGGAGCTATTTTCAAACAGTTATCAATTTGAACAACAATCTAATACCATTCTTACTTGGTCTTGATGCGGGAGGTATAGTCCCGAATTTGCAACTCAAATCCCATTCTGAAGTGTTCAATGCAATTTTTCAAATAAATGAATTTTATCCTCTGCTTAGATGCCGACTGGCGAATGGAGTGCATTACTTGGTAGAAGTTGTAATTTGTTTTGATGAATATGCTACCAACAAGTTACATTGTAATTATCTTGAGTCAAATTGTCCTTTACAATTTGTACTTTGAGATTAGGGTTCTATTGCAAAGATAATCCATATTTTTCAGGTTGTAGTCCTTTATTTTTGAAAGAAGTGTAATGACTCCAACTTTCTCTTGAACCGTCTGAGTTTGAATCTTTAGTTATTGATCATGGAAGAGAATTATTATT

Coding sequence (CDS)

ATGGCGACTGCATTTCTCTTTCGAAGAATTCCAGCGACATTCCTCTTCCAACTTCAACTTCTCCATTCTTATTCTTCTTCGCCGTCAACTTCTCCACTTTTCGATTCTGGTTTTCATGCGCTCGCCACCCTGATCATTGGCTTTCTTGGTTCTGGAAAGGGGAGTGGACAGGTCTACACTGCTCGATCGTGTAGAAGAAGACCTTCTAGGGCCTCACCTGCGGCCTCTACCCCAAATCCACCTAAACTTATCCTTGGGGAGAATTTCTATCCAGTTTTTCGGAAATACCATAAGATTTTTGGCCTGATATTGAGTTTGATGATGTTACCCATGTTTTTCTACCAACCTGTTCAATATGTTAAACCAGAACCTCCAATCCATCTTCGCCTTGTTTACCAGTGGCCTGGCACACTCTGCCACCTGCAACCTTGTCCAAGCGCACCAGTTGGCCCCTATAGATTTACGGTGCATGGCCTTTGGCCGCACATCGGAGCATTGCCACTAATATACTGTCCTTCTAATGAGTGGGACTTACGTGAGATTCGACCTTTAAGAGGCCAACTTGACTTTATTTGGCCTAGCTACATTGGAGTATCCAATTCTGCATTTTGGCTTCGACAATGGCGTAAACATGGTTCATGTACTGTTTTTGATCATTGGAGCTATTTTCAAACAGTTATCAATTTGAACAACAATCTAATACCATTCTTACTTGGTCTTGATGCGGGAGGTATAGTCCCGAATTTGCAACTCAAATCCCATTCTGAAGTGTTCAATGCAATTTTTCAAATAAATGAATTTTATCCTCTGCTTAGATGCCGACTGGCGAATGGAGTGCATTACTTGGTAGAAGTTGTAATTTGTTTTGATGAATATGCTACCAACAAGTTACATTGTAATTATCTTGAGTCAAATTGTCCTTTACAATTTGTACTTTGA

Protein sequence

MATAFLFRRIPATFLFQLQLLHSYSSSPSTSPLFDSGFHALATLIIGFLGSGKGSGQVYTARSCRRRPSRASPAASTPNPPKLILGENFYPVFRKYHKIFGLILSLMMLPMFFYQPVQYVKPEPPIHLRLVYQWPGTLCHLQPCPSAPVGPYRFTVHGLWPHIGALPLIYCPSNEWDLREIRPLRGQLDFIWPSYIGVSNSAFWLRQWRKHGSCTVFDHWSYFQTVINLNNNLIPFLLGLDAGGIVPNLQLKSHSEVFNAIFQINEFYPLLRCRLANGVHYLVEVVICFDEYATNKLHCNYLESNCPLQFVL
Homology
[Close]
BLAST of Sed0026554 vs. NCBI nr
Match: XP_008443402.1 (PREDICTED: ribonuclease MC-like [Cucumis melo])

HSP 1 Score: 142.5 bits (358), Expect = 6.1e-30
Identity = 73/184 (39.67%), Postives = 96/184 (52.17%), Query Frame = 0 

Query: 131 VYQWPGTLCHLQPCPSAPVGPYRFTVHGLWPHIGALPLIYCPSNEWDLREIRPLRGQLDF 190
           V QWP  +C LQ       G   FT+HGLWP  G   +  C  N +D  +I  L   L+ 
Sbjct: 33  VQQWPPAICTLQSGRCVGRGTRSFTIHGLWPQKGGRSVTNCSGNSFDFTKIAHLESDLNV 92

Query: 191 IWPSYIGVSNSAFWLRQWRKHGSC--TVFDHWSYFQTVINLNNNLIPFLLGLDAGGIVPN 250
           +WP+ +  +N  FW  +W KHG C  + FD   YFQT IN+ ++ I  L  L  GGIVPN
Sbjct: 93  VWPNVVTGNNKFFWGHEWNKHGICSESKFDQAKYFQTAINMRHS-IDLLSVLRTGGIVPN 152

Query: 251 LQLKSHSEVFNAIFQINEFYPLLRCRLA-NGVHYLVEVVICFDEYATNKLHCNYLESNCP 310
              K+   V  AI       P+LRC+ A NG   L E+VICFD+     ++CN   SNC 
Sbjct: 153 GASKAKQRVETAISSHFAKDPILRCKTASNGQVLLTEIVICFDDDGVTLINCNKARSNCA 212

Query: 311 LQFV 312
             F+
Sbjct: 213 RSFI 215

[Close]
BLAST of Sed0026554 vs. NCBI nr
Match: XP_022935695.1 (ribonuclease MC-like [Cucurbita moschata])

HSP 1 Score: 142.5 bits (358), Expect = 6.1e-30
Identity = 79/217 (36.41%), Postives = 110/217 (50.69%), Query Frame = 0 

Query: 98  KIFGLILSLMMLPMFFYQPVQYVKPEPPIHLRLVYQWPGTLCHLQPCPSAPVGPYRFTVH 157
           +IF L + + +LPM         K +P      V QWP  +C LQ       G   FT+H
Sbjct: 7   QIFLLFVFVSLLPM--------AKSQPFDDFWFVQQWPPNVCALQSGRCVGRGTNSFTIH 66

Query: 158 GLWPHIGALPLIYCPSNEWDLREIRPLRGQLDFIWPSYIGVSNSAFWLRQWRKHGSC--T 217
           GLWP  G   +  CP   +D  +I  L   L+ +WP+ I  ++  FW  +W  HG C  +
Sbjct: 67  GLWPQKGGNSVTNCPGTSFDFNQISHLENDLNIVWPNLITGNHKWFWGHEWNTHGICSES 126

Query: 218 VFDHWSYFQTVINLNNNLIPFLLGLDAGGIVPNLQLKSHSEVFNAIFQINEFYPLLRCRL 277
            FD  +YFQT INL +N I  L  L   G+VPN   KS   V +AI    +  P+LRC+ 
Sbjct: 127 KFDQKAYFQTSINLRHN-INLLSALRVQGVVPNGASKSKQRVESAIISHFKKIPVLRCKT 186

Query: 278 A-NGVHYLVEVVICFDEYATNKLHCNYLESNCPLQFV 312
           A NG   L E+V+C D+     ++CN  +SNC   F+
Sbjct: 187 ASNGQVLLTEIVMCIDDDGVTLINCNIAKSNCANNFI 214

[Close]
BLAST of Sed0026554 vs. NCBI nr
Match: BAA10891.1 (ribonuclease (RNase LC1) [Luffa aegyptiaca])

HSP 1 Score: 141.0 bits (354), Expect = 1.8e-29
Identity = 70/184 (38.04%), Postives = 97/184 (52.72%), Query Frame = 0 

Query: 130 LVYQWPGTLCHLQPCPSAPVGPYRFTVHGLWPHIGALPLIYCPSNEWDLREIRPLRGQLD 189
           +V  WP  +C  Q       G   FT+HG+WP  G   +I CP   +D  +I  L   L+
Sbjct: 31  MVQHWPPAVCSFQQGRCVGQGLRSFTIHGVWPQKGGTSVINCPGPTFDFTKISHLESTLN 90

Query: 190 FIWPSYIGVSNSAFWLRQWRKHGSCTV--FDHWSYFQTVINLNNNLIPFLLGLDAGGIVP 249
             WP+ I  +N  FW  +W KHG C+V  FD  +YFQ  IN+ N+ I  L  L  GG+VP
Sbjct: 91  VDWPNVITGNNKWFWGHEWNKHGICSVSKFDQQAYFQMAINMRNS-IDLLSALRVGGVVP 150

Query: 250 NLQLKSHSEVFNAIFQINEFYPLLRCRLANGVHYLVEVVICFDEYATNKLHCNYLESNCP 309
           N + K+   V +AI       P+LRCR       L+E+V+CFD+     ++CN   SNCP
Sbjct: 151 NGRSKARQRVQSAIRAQLGKEPVLRCRGTGRQSRLLEIVMCFDDDGVTLINCNPANSNCP 210

Query: 310 LQFV 312
             F+
Sbjct: 211 NSFI 213

[Close]
BLAST of Sed0026554 vs. NCBI nr
Match: XP_038905534.1 (ribonuclease MC-like [Benincasa hispida])

HSP 1 Score: 140.6 bits (353), Expect = 2.3e-29
Identity = 71/184 (38.59%), Postives = 97/184 (52.72%), Query Frame = 0 

Query: 131 VYQWPGTLCHLQPCPSAPVGPYRFTVHGLWPHIGALPLIYCPSNEWDLREIRPLRGQLDF 190
           V QWP  +C LQ       G   FT+HGLWP  G   +  C  N +D  +I  L   L+ 
Sbjct: 33  VQQWPPAVCALQSGRCVGRGTRSFTIHGLWPQKGGSSVTNCAGNSFDFTKIAHLENDLNI 92

Query: 191 IWPSYIGVSNSAFWLRQWRKHGSC--TVFDHWSYFQTVINLNNNLIPFLLGLDAGGIVPN 250
           +WP+ I  +N  FW  +W KHG C  + FD  +YFQT IN+ ++ I  L  +  GG++PN
Sbjct: 93  VWPNVITGNNKFFWGHEWNKHGICSESKFDQAAYFQTAINMRHS-IDLLSVMRTGGVIPN 152

Query: 251 LQLKSHSEVFNAIFQINEFYPLLRCRLA-NGVHYLVEVVICFDEYATNKLHCNYLESNCP 310
              K+   V + I       P+LRC+ A NG   L EVV+CFD+     L+CN   SNC 
Sbjct: 153 GASKAKQRVESVISSHFGKDPILRCKTASNGQVLLTEVVMCFDDDGVTLLNCNKARSNCA 212

Query: 311 LQFV 312
             F+
Sbjct: 213 TSFI 215

[Close]
BLAST of Sed0026554 vs. NCBI nr
Match: XP_022934270.1 (ribonuclease MC-like [Cucurbita moschata])

HSP 1 Score: 139.8 bits (351), Expect = 4.0e-29
Identity = 73/198 (36.87%), Postives = 101/198 (51.01%), Query Frame = 0 

Query: 117 VQYVKPEPPIHLRLVYQWPGTLCHLQPCPSAPVGPYRFTVHGLWPHIGALPLIYCPSNEW 176
           +   K +P      V QWP  +C LQ       G   FT+HGLWP      +  CP   +
Sbjct: 18  IPIAKSQPFDDFWFVQQWPPNVCALQSGRCVGRGTKSFTIHGLWPQKRGNSVTNCPGTSF 77

Query: 177 DLREIRPLRGQLDFIWPSYIGVSNSAFWLRQWRKHGSCTV--FDHWSYFQTVINLNNNLI 236
           D  +I  L   L+ +WP+ I  ++  FW  +W  HG C+   FD  +YFQT INL +N I
Sbjct: 78  DFNQIAHLENDLNVVWPNLITGNHKWFWGHEWNTHGICSESRFDEAAYFQTSINLRHN-I 137

Query: 237 PFLLGLDAGGIVPNLQLKSHSEVFNAIFQINEFYPLLRCRLA-NGVHYLVEVVICFDEYA 296
             L  L   G+VPN   KS   V NAI +  +  P+LRC+ A NG   L E+V+C D+  
Sbjct: 138 DLLSALRVQGVVPNGASKSKQRVENAIIKHFQNNPVLRCKTASNGQVLLTEIVMCIDDDG 197

Query: 297 TNKLHCNYLESNCPLQFV 312
              ++CN  +SNC   F+
Sbjct: 198 VTLINCNLAKSNCANSFI 214

[Close]
BLAST of Sed0026554 vs. ExPASy Swiss-Prot
Match: Q40965 (Ribonuclease S-2 OS=Pyrus pyrifolia OX=3767 PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 3.3e-18
Identity = 61/184 (33.15%), Postives = 89/184 (48.37%), Query Frame = 0 

Query: 127 HLRLVYQWPGTLCHLQPCPSAPVGPYRFTVHGLWP--HIGALPLIYCPSNEWDLREIRPL 186
           + +   Q+    C+  P P        FTVHGLWP   +G  P  YC +  +  R+I+ L
Sbjct: 25  YFQFTQQYQQAFCNSNPTPCKDPPDKLFTVHGLWPSTKVGRDP-EYCKTKRY--RKIQRL 84

Query: 187 RGQLDFIWPSYIG-VSNSAFWLRQWRKHGSC---TVFDHWSYFQTVINL----NNNLIPF 246
             QL+ IWP+     +N  FW +QW KHGSC    + +   YF+TVI +      N+   
Sbjct: 85  EPQLEIIWPNVSDRKANRGFWRKQWYKHGSCASPALPNQKHYFETVIRMFLAEKQNVSRI 144

Query: 247 LLGLDAGGIVPNLQLKSHSEVFNAI-FQINEFYPLLRCRLANGVHYLVEVVICFDEYATN 300
              L    I P  + ++  E+ NAI    N   P L+C+  NG+  LVEV +C D   T 
Sbjct: 145 ---LSMATIEPEGKNRTLLEIQNAIRAGTNNMIPKLKCQKVNGMTELVEVTLCHDSNLTQ 202

[Close]
BLAST of Sed0026554 vs. ExPASy Swiss-Prot
Match: Q40381 (Ribonuclease S-7 OS=Nicotiana alata OX=4087 PE=1 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.2e-17
Identity = 57/183 (31.15%), Postives = 83/183 (45.36%), Query Frame = 0 

Query: 127 HLRLVYQWPGTLCHLQPCPSAPVGPYRFTVHGLWPHIGALPLIYCPSNEWDLREIRPLRG 186
           +++LV QWP   CH  PC      P  FT+HGLWP   +  L YC + E + + I     
Sbjct: 26  YMQLVLQWPTAFCHTTPCKRI---PNNFTIHGLWPDNVSTTLNYCAAKE-NFKNIEDDTK 85

Query: 187 QLDFI--WPSYIGV-----SNSAFWLRQWRKHGSC--TVFDHWSYFQTVINLNNNLIPFL 246
           + D    WP           +  FW  ++ KHG C    ++   YF   + L +     L
Sbjct: 86  KDDLYKRWPDLTTAETYCKQHQNFWRHEYNKHGKCCSESYNREQYFDLAMALKDK-FDLL 145

Query: 247 LGLDAGGIVPNLQLKSHSEVFNA-IFQINEFYPLLRCRLANGVHYLVEVVICFDEYATNK 300
             L   GI+P   +K   +  N+ I +I + YP L C    G+  LVE+ ICFD    N 
Sbjct: 146 SSLRNHGIIPGRGMKYTVQKINSTIKKITQGYPNLSC--TKGIMELVEIGICFDSMVKNV 201

[Close]
BLAST of Sed0026554 vs. ExPASy Swiss-Prot
Match: P42813 (Ribonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=RNS1 PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 6.8e-16
Identity = 57/179 (31.84%), Postives = 81/179 (45.25%), Query Frame = 0 

Query: 131 VYQWPGTLCHLQP---CPSAPVGPYRFTVHGLWPHI--GALPLIYCPSNEWDLREIRPLR 190
           V QWPG+ C  Q     P++      F +HGLWP+   G  P     S  +D   I  L 
Sbjct: 36  VQQWPGSYCDTQKKCCYPNSGKPAADFGIHGLWPNYKDGTYPSNCDASKPFDSSTISDLL 95

Query: 191 GQLDFIWPSYIGVSNS--AFWLRQWRKHGSC--TVFDHWSYFQTVINLNNNLIPFLLGLD 250
             +   WP+    S S  AFW  +W KHG+C  +V D   YFQT +NL       L  L 
Sbjct: 96  TSMKKSWPTLACPSGSGEAFWEHEWEKHGTCSESVIDQHEYFQTALNLKQK-TNLLGALT 155

Query: 251 AGGIVPNLQLKSHSEVFNAIFQINEFYPLLRC-RLANGVHYLVEVVICFDEYATNKLHC 300
             GI P+ +  S   + ++I +   F P + C R  +G   L +V +C D   +  + C
Sbjct: 156 KAGINPDGKSYSLESIRDSIKESIGFTPWVECNRDGSGNSQLYQVYLCVDRSGSGLIEC 213

[Close]
BLAST of Sed0026554 vs. ExPASy Swiss-Prot
Match: Q38717 (Ribonuclease S-4 OS=Antirrhinum hispanicum OX=49039 GN=S4 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.2e-15
Identity = 63/185 (34.05%), Postives = 88/185 (47.57%), Query Frame = 0 

Query: 127 HLRLVYQWPGTLC--HLQPCPSAPVGPYRFTVHGLWP--HIGALPLIYCPSNEWDLREIR 186
           +L+LV QWP + C  + + C   P+ P  FT+HGLWP  +    P   C +N +      
Sbjct: 35  YLKLVLQWPKSFCLINSRKCQRNPL-PSNFTIHGLWPDNYTRQAPQ-SCTTNNFQRFTDT 94

Query: 187 PLRGQLDFIWP-----SYIGVSNSAFWLRQWRKHGSCTVFDHWS--YFQTVINLNNNLIP 246
            +  +++  WP     S  G+S + FW  QWRKHGSC    H S  YF   + L + L  
Sbjct: 95  DIEQRMEESWPDLKQQSIAGLSYN-FWQDQWRKHGSCCFPPHESEIYFLKALELKDRL-D 154

Query: 247 FLLGLDAGGIVPNL-QLKSHSEVFNAIFQINEFYPLLRCRLANGVHYLVEVVICFDEYAT 300
            L  L+     P   Q  S   VFN I +     P+L+C  +    YL EVVIC D    
Sbjct: 155 VLTILENNNFNPGTPQPFSVLRVFNTISRAIGKTPILKCAQS----YLKEVVICVDNNGA 211

[Close]
BLAST of Sed0026554 vs. ExPASy Swiss-Prot
Match: P80196 (Intracellular ribonuclease LX OS=Solanum lycopersicum OX=4081 GN=RNALX PE=1 SV=2)

HSP 1 Score: 77.0 bits (188), Expect = 4.1e-13
Identity = 51/178 (28.65%), Postives = 78/178 (43.82%), Query Frame = 0 

Query: 131 VYQWPGTLCHL-QPC--PSAPVGPYRFTVHGLWPHI--GALPLIYCPSNEWDLREIRPLR 190
           V QWP + C   + C  P+       F++HGLWP+   G  P      +  D  E   L 
Sbjct: 34  VQQWPASYCDTRRSCCYPTTGKPDEDFSIHGLWPNYKDGKWPQNCDRESSLDESEFSDLI 93

Query: 191 GQLDFIWPSYIGVSNSA--FWLRQWRKHGSCTVFDHWSYFQTVINLNNNLIPFLLGLDAG 250
             ++  WPS    S+    FW  +W KHG+C+  +  +YFQT ++        L  L+  
Sbjct: 94  STMEKNWPSLACPSSDGLKFWSHEWLKHGTCSALNQHAYFQTALDFKTK-SNLLQNLNNA 153

Query: 251 GIVP-NLQLKSHSEVFNAIFQINEFYPLLRCRL-ANGVHYLVEVVICFDEYATNKLHC 300
           GI P N        +  AI +     P + C + + G H L +V +C D  A+  + C
Sbjct: 154 GIKPRNGDYYGVESIKKAIEKGVGHTPFIECNVDSQGNHQLYQVYLCVDSSASKFIDC 210

[Close]
BLAST of Sed0026554 vs. ExPASy TrEMBL
Match: A0A1S3B8Q3 (Ribonuclease T(2) OS=Cucumis melo OX=3656 GN=LOC103486996 PE=3 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 3.0e-30
Identity = 73/184 (39.67%), Postives = 96/184 (52.17%), Query Frame = 0 

Query: 131 VYQWPGTLCHLQPCPSAPVGPYRFTVHGLWPHIGALPLIYCPSNEWDLREIRPLRGQLDF 190
           V QWP  +C LQ       G   FT+HGLWP  G   +  C  N +D  +I  L   L+ 
Sbjct: 33  VQQWPPAICTLQSGRCVGRGTRSFTIHGLWPQKGGRSVTNCSGNSFDFTKIAHLESDLNV 92

Query: 191 IWPSYIGVSNSAFWLRQWRKHGSC--TVFDHWSYFQTVINLNNNLIPFLLGLDAGGIVPN 250
           +WP+ +  +N  FW  +W KHG C  + FD   YFQT IN+ ++ I  L  L  GGIVPN
Sbjct: 93  VWPNVVTGNNKFFWGHEWNKHGICSESKFDQAKYFQTAINMRHS-IDLLSVLRTGGIVPN 152

Query: 251 LQLKSHSEVFNAIFQINEFYPLLRCRLA-NGVHYLVEVVICFDEYATNKLHCNYLESNCP 310
              K+   V  AI       P+LRC+ A NG   L E+VICFD+     ++CN   SNC 
Sbjct: 153 GASKAKQRVETAISSHFAKDPILRCKTASNGQVLLTEIVICFDDDGVTLINCNKARSNCA 212

Query: 311 LQFV 312
             F+
Sbjct: 213 RSFI 215

[Close]
BLAST of Sed0026554 vs. ExPASy TrEMBL
Match: Q40115 (Ribonuclease (RNase LC1) OS=Luffa aegyptiaca OX=3670 PE=2 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 8.6e-30
Identity = 70/184 (38.04%), Postives = 97/184 (52.72%), Query Frame = 0 

Query: 130 LVYQWPGTLCHLQPCPSAPVGPYRFTVHGLWPHIGALPLIYCPSNEWDLREIRPLRGQLD 189
           +V  WP  +C  Q       G   FT+HG+WP  G   +I CP   +D  +I  L   L+
Sbjct: 31  MVQHWPPAVCSFQQGRCVGQGLRSFTIHGVWPQKGGTSVINCPGPTFDFTKISHLESTLN 90

Query: 190 FIWPSYIGVSNSAFWLRQWRKHGSCTV--FDHWSYFQTVINLNNNLIPFLLGLDAGGIVP 249
             WP+ I  +N  FW  +W KHG C+V  FD  +YFQ  IN+ N+ I  L  L  GG+VP
Sbjct: 91  VDWPNVITGNNKWFWGHEWNKHGICSVSKFDQQAYFQMAINMRNS-IDLLSALRVGGVVP 150

Query: 250 NLQLKSHSEVFNAIFQINEFYPLLRCRLANGVHYLVEVVICFDEYATNKLHCNYLESNCP 309
           N + K+   V +AI       P+LRCR       L+E+V+CFD+     ++CN   SNCP
Sbjct: 151 NGRSKARQRVQSAIRAQLGKEPVLRCRGTGRQSRLLEIVMCFDDDGVTLINCNPANSNCP 210

Query: 310 LQFV 312
             F+
Sbjct: 211 NSFI 213

[Close]
BLAST of Sed0026554 vs. ExPASy TrEMBL
Match: A0A0A0LC37 (Ribonuclease T(2) OS=Cucumis sativus OX=3659 GN=Csa_3G825050 PE=3 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 1.6e-28
Identity = 70/184 (38.04%), Postives = 95/184 (51.63%), Query Frame = 0 

Query: 131 VYQWPGTLCHLQPCPSAPVGPYRFTVHGLWPHIGALPLIYCPSNEWDLREIRPLRGQLDF 190
           V QWP  +C LQ       G   FT+HGLWP  G   +  C  N++D  +I  L   L+ 
Sbjct: 34  VQQWPPAVCTLQSGRCVGRGTRSFTIHGLWPQKGGRSVTNCTGNQFDFTKIAHLENDLNV 93

Query: 191 IWPSYIGVSNSAFWLRQWRKHGSC--TVFDHWSYFQTVINLNNNLIPFLLGLDAGGIVPN 250
           +WP+ +  +N  FW  +W KHG C  + FD   YFQT IN+ +  I  L  L  GG+ PN
Sbjct: 94  VWPNVVTGNNKFFWGHEWNKHGICSESKFDEAKYFQTAINMRHG-IDLLSVLRTGGVGPN 153

Query: 251 LQLKSHSEVFNAIFQINEFYPLLRCRLA-NGVHYLVEVVICFDEYATNKLHCNYLESNCP 310
              K+   V  AI       P+LRC+ A NG   L E+V+CFD+     ++CN   SNC 
Sbjct: 154 GASKAKQRVETAISSHFGKDPILRCKKASNGQVLLTEIVMCFDDDGVTLINCNKARSNCA 213

Query: 311 LQFV 312
             F+
Sbjct: 214 GSFI 216

[Close]
BLAST of Sed0026554 vs. ExPASy TrEMBL
Match: Q40116 (Ribonuclease T(2) OS=Luffa aegyptiaca OX=3670 PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 8.1e-28
Identity = 65/187 (34.76%), Postives = 94/187 (50.27%), Query Frame = 0 

Query: 127 HLRLVYQWPGTLCHLQPCPSAPVGPYRFTVHGLWPHIGALPLIYCPSNEWDLREIRPLRG 186
           H   V QWP T C  Q  P     P  F +HGLWP  G   ++YC  N +D  +I  L  
Sbjct: 29  HFFFVQQWPPTTCQQQQKPCFQPPPATFKIHGLWPQKGPNSVVYCNKN-FDRTQISSLEN 88

Query: 187 QLDFIWPSYIGVSNSAFWLRQWRKHGSC--TVFDHWSYFQTVINLNNNLIPFLLGLDAGG 246
           QLD +WP  +  +N+ FW  +W KHGSC  + F+   YFQT IN+ N  +  L  L  GG
Sbjct: 89  QLDVVWPDVVTGNNTGFWEHEWNKHGSCSESQFNQTLYFQTAINMMNK-VNLLKALGKGG 148

Query: 247 IVPNLQLKSHSEVFNAIFQINEFYPLLRCRLANGVHYLVEVVICFDEYATNKLHCNYLES 306
           I  + + KS   +   +       P LRC+      +L+E+V+CF +     ++C   + 
Sbjct: 149 ITSDERTKSSQTMQKVLLAQFGNQPFLRCKKVGQQFWLLEIVMCFKDDGVTMINCQPSKV 208

Query: 307 NCPLQFV 312
           +CP  F+
Sbjct: 209 SCPPNFI 213

[Close]
BLAST of Sed0026554 vs. ExPASy TrEMBL
Match: A0A6J1CKH7 (Ribonuclease T(2) OS=Momordica charantia OX=3673 GN=LOC111012440 PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.4e-27
Identity = 72/211 (34.12%), Postives = 108/211 (51.18%), Query Frame = 0 

Query: 103 ILSLMMLPMFFYQPVQYVKPEPPIHLRLVYQWPGTLCHLQPCPSAPVGPYRFTVHGLWPH 162
           ++ +  L +  + PV  VK +   +   V QWP  +C+ Q       G   FTVHGLWP 
Sbjct: 12  VVLMFALTITIFFPV--VKSQAFDNFWFVQQWPPAVCNFQQGRCVGQGLRTFTVHGLWPQ 71

Query: 163 IGALPLIYCPSNEWDLREIRPLRGQLDFIWPSYIGVSNSAFWLRQWRKHGSC--TVFDHW 222
            G   +I C    +D  ++  L+  L+ +WP+ I  +N  FW  +W KHG C  + FD  
Sbjct: 72  KGGTSVINCSGTRFDFTQVSHLQNDLNRVWPNVITGNNRFFWGHEWNKHGICSESKFDMK 131

Query: 223 SYFQTVINLNNNLIPFLLGLDAGGIVPNLQLKSHSEVFNAIFQINEFYPLLRCRLANGVH 282
           +YFQ  IN+ ++L   +  L  GG+ PN + KS   V +AI       P+LRCR      
Sbjct: 132 AYFQMAINMRDSL-DLMNALRVGGLAPNGRTKSRQRVQSAIRAQFGKEPVLRCRGTGRNV 191

Query: 283 YLVEVVICFDEYATNKLHCNYLESNCPLQFV 312
            L+E+V+CFD+     ++CN   SNC   F+
Sbjct: 192 RLIEIVMCFDDDGVTLINCNPASSNCANSFI 219

[Close]
BLAST of Sed0026554 vs. TAIR 10
Match: AT2G02990.1 (ribonuclease 1 )

HSP 1 Score: 86.3 bits (212), Expect = 4.8e-17
Identity = 57/179 (31.84%), Postives = 81/179 (45.25%), Query Frame = 0 

Query: 131 VYQWPGTLCHLQP---CPSAPVGPYRFTVHGLWPHI--GALPLIYCPSNEWDLREIRPLR 190
           V QWPG+ C  Q     P++      F +HGLWP+   G  P     S  +D   I  L 
Sbjct: 36  VQQWPGSYCDTQKKCCYPNSGKPAADFGIHGLWPNYKDGTYPSNCDASKPFDSSTISDLL 95

Query: 191 GQLDFIWPSYIGVSNS--AFWLRQWRKHGSC--TVFDHWSYFQTVINLNNNLIPFLLGLD 250
             +   WP+    S S  AFW  +W KHG+C  +V D   YFQT +NL       L  L 
Sbjct: 96  TSMKKSWPTLACPSGSGEAFWEHEWEKHGTCSESVIDQHEYFQTALNLKQK-TNLLGALT 155

Query: 251 AGGIVPNLQLKSHSEVFNAIFQINEFYPLLRC-RLANGVHYLVEVVICFDEYATNKLHC 300
             GI P+ +  S   + ++I +   F P + C R  +G   L +V +C D   +  + C
Sbjct: 156 KAGINPDGKSYSLESIRDSIKESIGFTPWVECNRDGSGNSQLYQVYLCVDRSGSGLIEC 213

The following BLAST results are available for this feature:
BLAST of Sed0026554 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008443402.16.1e-3039.67PREDICTED: ribonuclease MC-like [Cucumis melo][more]
XP_022935695.16.1e-3036.41ribonuclease MC-like [Cucurbita moschata][more]
BAA10891.11.8e-2938.04ribonuclease (RNase LC1) [Luffa aegyptiaca][more]
XP_038905534.12.3e-2938.59ribonuclease MC-like [Benincasa hispida][more]
XP_022934270.14.0e-2936.87ribonuclease MC-like [Cucurbita moschata][more]
BLAST of Sed0026554 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q409653.3e-1833.15Ribonuclease S-2 OS=Pyrus pyrifolia OX=3767 PE=1 SV=1[more]
Q403811.2e-1731.15Ribonuclease S-7 OS=Nicotiana alata OX=4087 PE=1 SV=1[more]
P428136.8e-1631.84Ribonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=RNS1 PE=1 SV=1[more]
Q387171.2e-1534.05Ribonuclease S-4 OS=Antirrhinum hispanicum OX=49039 GN=S4 PE=2 SV=1[more]
P801964.1e-1328.65Intracellular ribonuclease LX OS=Solanum lycopersicum OX=4081 GN=RNALX PE=1 SV=2[more]
BLAST of Sed0026554 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3B8Q33.0e-3039.67Ribonuclease T(2) OS=Cucumis melo OX=3656 GN=LOC103486996 PE=3 SV=1[more]
Q401158.6e-3038.04Ribonuclease (RNase LC1) OS=Luffa aegyptiaca OX=3670 PE=2 SV=1[more]
A0A0A0LC371.6e-2838.04Ribonuclease T(2) OS=Cucumis sativus OX=3659 GN=Csa_3G825050 PE=3 SV=1[more]
Q401168.1e-2834.76Ribonuclease T(2) OS=Luffa aegyptiaca OX=3670 PE=2 SV=1[more]
A0A6J1CKH71.4e-2734.12Ribonuclease T(2) OS=Momordica charantia OX=3673 GN=LOC111012440 PE=3 SV=1[more]
BLAST of Sed0026554 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G02990.14.8e-1731.84ribonuclease 1 [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036430Ribonuclease T2-like superfamilyGENE3D3.90.730.10coord: 127..307
e-value: 1.4E-33
score: 118.5
IPR036430Ribonuclease T2-like superfamilySUPERFAMILY55895Ribonuclease Rh-likecoord: 128..310
IPR001568Ribonuclease T2-likePFAMPF00445Ribonuclease_T2coord: 128..299
e-value: 2.8E-25
score: 89.5
IPR001568Ribonuclease T2-likePANTHERPTHR11240RIBONUCLEASE T2coord: 127..305
NoneNo IPR availablePANTHERPTHR11240:SF49RIBONUCLEASE 3coord: 127..305
IPR018188Ribonuclease T2, His active site 1PROSITEPS00530RNASE_T2_1coord: 154..161

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0026554.1Sed0026554.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090304 nucleic acid metabolic process
molecular_function GO:0033897 ribonuclease T2 activity
molecular_function GO:0003723 RNA binding