Sed0026545 (gene) Chayote v1

Overview


Name	Sed0026545
Type	gene
Organism	Sechium edule (Chayote v1)
Description	PLAT domain-containing protein
Location	LG05: 4501997 .. 4504253 (+)
RNA-Seq Expression	Sed0026545
Synteny	Sed0026545

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCAACTGGAAAGAACGAAAATGGCGCCTCGTTGTCTCTGCATTCCCACCGTTTTCATCGCTCTCTTCCTCTCTGCAATGGCCGACAACTCTCACGTAAGTTTATTCTCTTTTAACGCATTTTTTCTTTACTCATTACACGATCTTCGTAATTTCATCACCAGATCCCGTTTGATTGATCTCCGTTGAGTCTGATCTTTCTTTCTGGTTTGTTTTGACTGCGTTTTGTTTCTTTTTTGTTGATCGATCGCGTTTAGCAATCAAGTCATTGCAACATTTCAGATTCGTTGTGATTTATGAGTTCTGACTGTCGAGCTGATTACAGATTCATGTAGTTTAGAGAATGATGCCGATTGAGTTTGATCTTTCTTTTTTTATCATTACTTTTGACTGCATTTGTTTCTGTTTTGTTGATCGATCGCCTACAGCAATCAAGTTACATTTCAGATTCGTTGTGATTTATGAGTTCTAACTATCCAACTGATTACAGAATCACGTGGTTTAGTATATGAGCCGATTTCTGTGTTGATTATTGTCGATTTCATGTACAATAACGAAGTGAATGATTGATTTGCGTTTGAGATCTATTTCGAGCTATGACAGGGCAATTAATTGCAGACATGATATTTAGAAAGATAATGCTCCGATTTCTCCGTTAATAATCAGCCGATTATGTAAATAAAGAACGAAATGAATGATCCACGTTTCTGATCGATTAGATGAGCTATGACAGGTCAAGTAGTTACAAAAATACTATTAAGAAAATGCAAGATCATGCTCCGATTTATTGATTGAATGAGTAAGAAAGAATGAAATGAATGATCCGCGTTTCAGATTTGATTATATGAGTTATCACAGACCAACTAATTATTGAAATGTTGTATAGAAAATTCTTGATCGTGCTCTGATTTCTGCGTTAACGATCCATCTGTTGTATGCGTAATTAAGAATTGAATGAATCGATTCAGATTTCAATATAATATTGAGAAATAAGTTAGAACAGGTTAATTAGGCCCGATTTGATAATCATTTGGTTTTTTTTTTTTTGTTTATGAAATCTAAGCTTATTTCTACCCAAAGATTTGGAAGCTATTTTTTTTTTTTTATACATGCTTGGCTTACTTTAACTTTGGATCAAATACCGGCTTATATGCCCGTTTGAGTGGGGTCCACACCCGCTTTTTTTGAATTCAAAGCATTTTGGGTAGGATCAAAATTTGGGAGGCTCATAACTCACATGGAGCTTTGATATCATATTAGAGAATATGAGGTTCCAGTTCAAAATCAATTGACAATGAGGAGAGTAACTCATATCTCTTTATAAATATGTCCTTACCTTTTCAATGTAGGACAATTTCCACATGGTGAGTATGTCCGACATTAAAATATAGGAAAGACGTAGATATCCAAATAAAGAAAAAGGAATAGGAAGATGGTTGTTGTAGGCTTAAATTTTATAAACAAAAAAGAAAAACAAAATGGTTATCGCTGGGGCTGAATTATTGAATTGTTGCAAGATCATGCTCGGATTTCTGCATTTTGATGGACACCGATCGATTTTAATCTGAAAAATTGGAATCAATTTCTAACGACAGTGTTTTTTTCTCCGGTGCAGGACAAATGCGTGTACACGTTCTACGTGAAGACGGGATCGGCAATAAAGGGCGGAACCGACGCGAAAATCAGCGTGACAGTGAGCGACGCATCGGGGCAGTGGGTGGCGATTTCGGATCTGGAATCGTGGGGGATAATGGAACAAGGCCACGACTATTTCGAACGAAGCAACCTCGACATATTCAGCGGCCGCGGCGCGTGCATCGAGGCGCCGCTGTGCCGACTGAACCTCACCTCCGACGGATCCGGCGCCCACCACGGTTGGTTCTGCGAATATGTGGAGATGACGTTGACGGGGCCGCACAGACCCTGCTCCCAAACGGCGTTTCACGTCGACCAGTGGCTCGCCACCGACGCGCCGCCGTATCAGCTGACGGCGCTTCTGGACGGGTGCGGGGATGATGAGATCAGAGGACATGGACGACCGACGAGGCATATGGTCATCAAATCCAAAGCCTCTGCTTCGTCTTAACGGAATGCGATCGAGAGAAGCTTTGTGAGTTTGTTTTTTTTTAATTTTTATTTAAATAAATAGGCATTTTGTTACTTCGTTTTCCCAATTTCCTGCCTTTTCTTTTCTTGTTTGTGAGATGTAAATTTCTTAGATACCCAGTTAAAATCTTATTTTTGAACTCCATAAATTC

mRNA sequence

CTCAACTGGAAAGAACGAAAATGGCGCCTCGTTGTCTCTGCATTCCCACCGTTTTCATCGCTCTCTTCCTCTCTGCAATGGCCGACAACTCTCACGACAAATGCGTGTACACGTTCTACGTGAAGACGGGATCGGCAATAAAGGGCGGAACCGACGCGAAAATCAGCGTGACAGTGAGCGACGCATCGGGGCAGTGGGTGGCGATTTCGGATCTGGAATCGTGGGGGATAATGGAACAAGGCCACGACTATTTCGAACGAAGCAACCTCGACATATTCAGCGGCCGCGGCGCGTGCATCGAGGCGCCGCTGTGCCGACTGAACCTCACCTCCGACGGATCCGGCGCCCACCACGGTTGGTTCTGCGAATATGTGGAGATGACGTTGACGGGGCCGCACAGACCCTGCTCCCAAACGGCGTTTCACGTCGACCAGTGGCTCGCCACCGACGCGCCGCCGTATCAGCTGACGGCGCTTCTGGACGGGTGCGGGGATGATGAGATCAGAGGACATGGACGACCGACGAGGCATATGGTCATCAAATCCAAAGCCTCTGCTTCGTCTTAACGGAATGCGATCGAGAGAAGCTTTGTGAGTTTGTTTTTTTTTAATTTTTATTTAAATAAATAGGCATTTTGTTACTTCGTTTTCCCAATTTCCTGCCTTTTCTTTTCTTGTTTGTGAGATGTAAATTTCTTAGATACCCAGTTAAAATCTTATTTTTGAACTCCATAAATTC

Coding sequence (CDS)

ATGGCGCCTCGTTGTCTCTGCATTCCCACCGTTTTCATCGCTCTCTTCCTCTCTGCAATGGCCGACAACTCTCACGACAAATGCGTGTACACGTTCTACGTGAAGACGGGATCGGCAATAAAGGGCGGAACCGACGCGAAAATCAGCGTGACAGTGAGCGACGCATCGGGGCAGTGGGTGGCGATTTCGGATCTGGAATCGTGGGGGATAATGGAACAAGGCCACGACTATTTCGAACGAAGCAACCTCGACATATTCAGCGGCCGCGGCGCGTGCATCGAGGCGCCGCTGTGCCGACTGAACCTCACCTCCGACGGATCCGGCGCCCACCACGGTTGGTTCTGCGAATATGTGGAGATGACGTTGACGGGGCCGCACAGACCCTGCTCCCAAACGGCGTTTCACGTCGACCAGTGGCTCGCCACCGACGCGCCGCCGTATCAGCTGACGGCGCTTCTGGACGGGTGCGGGGATGATGAGATCAGAGGACATGGACGACCGACGAGGCATATGGTCATCAAATCCAAAGCCTCTGCTTCGTCTTAA

Protein sequence

MAPRCLCIPTVFIALFLSAMADNSHDKCVYTFYVKTGSAIKGGTDAKISVTVSDASGQWVAISDLESWGIMEQGHDYFERSNLDIFSGRGACIEAPLCRLNLTSDGSGAHHGWFCEYVEMTLTGPHRPCSQTAFHVDQWLATDAPPYQLTALLDGCGDDEIRGHGRPTRHMVIKSKASASS

Homology

[Close]

BLAST of Sed0026545 vs. NCBI nr
Match: XP_022957900.1 (PLAT domain-containing protein 3-like [Cucurbita moschata] >KAG6605634.1 PLAT domain-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035544.1 PLAT domain-containing protein 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 286.6 bits (732), Expect = 1.5e-73
Identity = 137/186 (73.66%), Postives = 157/186 (84.41%), Query Frame = 0


Query: 1   MAPRCLCIPTVFIALFLSAMADNSHDKCVYTFYVKTGSAIKGGTDAKISVTVSDASGQWV 60
           MAPRCL    +FIALFLSA+A N+ +KCVYTFYVKTGS +KGGTDA ISVT+SDA+GQ V
Sbjct: 1   MAPRCLFFSLIFIALFLSALARNTKEKCVYTFYVKTGSVLKGGTDAMISVTISDANGQSV 60

Query: 61  AISDLESWGIMEQGHDYFERSNLDIFSGRGACIEAPLCRLNLTSDGSGAHHGWFCEYVEM 120
            I+DLESWG+ME+ HDYFER N+DIFSGRG CIEAPLCRLNLTSDGSGAHHGWFC+Y+E+
Sbjct: 61  EIADLESWGLMEKNHDYFERDNVDIFSGRGPCIEAPLCRLNLTSDGSGAHHGWFCDYLEV 120

Query: 121 TLTGPHRPCSQTAFHVDQWLATDAPPYQLTALLDGCGDDEIRGHGRPTRH------MVIK 180
           T TGPHR CSQTAF+VDQWLATDAPP+QLT +LDGC DD I+GHG  +RH      +V  
Sbjct: 121 TSTGPHRSCSQTAFYVDQWLATDAPPFQLTTILDGC-DDWIKGHGE-SRHTSSGKLVVSG 180

[Close]

BLAST of Sed0026545 vs. NCBI nr
Match: XP_023534497.1 (PLAT domain-containing protein 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 285.4 bits (729), Expect = 3.4e-73
Identity = 137/186 (73.66%), Postives = 157/186 (84.41%), Query Frame = 0


Query: 1   MAPRCLCIPTVFIALFLSAMADNSHDKCVYTFYVKTGSAIKGGTDAKISVTVSDASGQWV 60
           MAPRCL    +FIALFLSA+A N+ +KCVYTFYVKTGS +KGGTDA ISVT+SDA+GQ V
Sbjct: 1   MAPRCLFFSLIFIALFLSALARNTKEKCVYTFYVKTGSVLKGGTDAIISVTISDANGQPV 60

Query: 61  AISDLESWGIMEQGHDYFERSNLDIFSGRGACIEAPLCRLNLTSDGSGAHHGWFCEYVEM 120
            I+DLESWG+ME+ HDYFER N+DIFSGRG CIEAPLCRLNLTSDGSGAHHGWFC+Y+E+
Sbjct: 61  EIADLESWGLMEKNHDYFERDNVDIFSGRGPCIEAPLCRLNLTSDGSGAHHGWFCDYLEV 120

Query: 121 TLTGPHRPCSQTAFHVDQWLATDAPPYQLTALLDGCGDDEIRGHGRPTRH------MVIK 180
           T TGPHR CSQTAF+VDQWLATDAPP+QLT +LDGC DD I+GHG  +RH      +V  
Sbjct: 121 TSTGPHRSCSQTAFYVDQWLATDAPPFQLTTILDGC-DDWIKGHGE-SRHTSSGKLVVSG 180

[Close]

BLAST of Sed0026545 vs. NCBI nr
Match: XP_022994993.1 (PLAT domain-containing protein 3-like [Cucurbita maxima])

HSP 1 Score: 283.5 bits (724), Expect = 1.3e-72
Identity = 136/186 (73.12%), Postives = 156/186 (83.87%), Query Frame = 0


Query: 1   MAPRCLCIPTVFIALFLSAMADNSHDKCVYTFYVKTGSAIKGGTDAKISVTVSDASGQWV 60
           MAPRCL    +FIALFLSA+A N+ +KCVYTFYVKTGS +KGGTDA ISVT+SDA+GQ V
Sbjct: 1   MAPRCLFFSLIFIALFLSALARNTKEKCVYTFYVKTGSVLKGGTDAIISVTISDANGQSV 60

Query: 61  AISDLESWGIMEQGHDYFERSNLDIFSGRGACIEAPLCRLNLTSDGSGAHHGWFCEYVEM 120
            I+DLESWG+ME+ HDYFER N+DIFSGRG CIEAPLCRLNLTSDGSGAHHGWFC+Y+E+
Sbjct: 61  EIADLESWGLMEKNHDYFERDNVDIFSGRGPCIEAPLCRLNLTSDGSGAHHGWFCDYLEV 120

Query: 121 TLTGPHRPCSQTAFHVDQWLATDAPPYQLTALLDGCGDDEIRGHGRPTRH------MVIK 180
           T TGPHR CSQTAF+VDQWLATDAPP+QLT +LDGC DD I+GH   +RH      +V  
Sbjct: 121 TSTGPHRSCSQTAFYVDQWLATDAPPFQLTTILDGC-DDWIKGH-EASRHTSRGKLVVSG 180

[Close]

BLAST of Sed0026545 vs. NCBI nr
Match: XP_022159540.1 (PLAT domain-containing protein 3-like [Momordica charantia] >XP_022159543.1 PLAT domain-containing protein 3-like [Momordica charantia])

HSP 1 Score: 282.7 bits (722), Expect = 2.2e-72
Identity = 132/187 (70.59%), Postives = 157/187 (83.96%), Query Frame = 0


Query: 1   MAPRCLCIPTVFIALFLSAMADNSHDKCVYTFYVKTGSAIKGGTDAKISVTVSDASGQWV 60
           MAP  LC   VFIALFLSAMA +SHDKCVYTFYV+TGS +KGGTD+KIS+T+ D+ GQ V
Sbjct: 1   MAPPSLCFSIVFIALFLSAMAGDSHDKCVYTFYVRTGSILKGGTDSKISITLGDSFGQSV 60

Query: 61  AISDLESWGIMEQGHDYFERSNLDIFSGRGACIEAPLCRLNLTSDGSGAHHGWFCEYVEM 120
           +ISDLESWG+M  GHDYFER ++D+FSGRGACI+AP+CRLNLTSDGSG HHGW+C+YVE+
Sbjct: 61  SISDLESWGLMGPGHDYFERDSVDVFSGRGACIDAPVCRLNLTSDGSGPHHGWYCDYVEV 120

Query: 121 TLTGPHRPCSQTAFHVDQWLATDAPPYQLTALLDGCGDDEIRGHGRPTRHM------VIK 180
           T TGPHR CSQTAF+VDQWLATD PP+QLT +LDGC +D +RGHG P++HM      V  
Sbjct: 121 TSTGPHRACSQTAFYVDQWLATDVPPFQLTTILDGC-EDWVRGHG-PSKHMNSRRLVVSS 180

Query: 181 SKASASS 182
           SK +ASS
Sbjct: 181 SKKAASS 185

[Close]

BLAST of Sed0026545 vs. NCBI nr
Match: KAA0042612.1 (Lipoxygenase, LH2 [Cucumis melo var. makuwa] >TYK06014.1 Lipoxygenase, LH2 [Cucumis melo var. makuwa])

HSP 1 Score: 272.7 bits (696), Expect = 2.3e-69
Identity = 124/171 (72.51%), Postives = 144/171 (84.21%), Query Frame = 0


Query: 1   MAPRCLCIPTVFIALFLSAMADNSHDKCVYTFYVKTGSAIKGGTDAKISVTVSDASGQWV 60
           MA   LC   +FIALF SAMAD S +KCVYT YVKTGS +KGGTD+KISV + D+ GQ V
Sbjct: 1   MASSSLCFSIIFIALFFSAMADKSSEKCVYTLYVKTGSILKGGTDSKISVKLGDSRGQSV 60

Query: 61  AISDLESWGIMEQGHDYFERSNLDIFSGRGACIEAPLCRLNLTSDGSGAHHGWFCEYVEM 120
            ISDLESWG+M+QGHDYFER N+DIFSGRG C+E+P+CRLNLTSDGSG+HHGW+C+YVE+
Sbjct: 61  EISDLESWGLMKQGHDYFERDNIDIFSGRGVCLESPVCRLNLTSDGSGSHHGWYCDYVEV 120

Query: 121 TLTGPHRPCSQTAFHVDQWLATDAPPYQLTALLDGCGDDEIRGHGRPTRHM 172
           T  GPHR CSQTAF+VDQWLATDAPP+QLT  LDGC DD + GHG P+RHM
Sbjct: 121 TSAGPHRACSQTAFYVDQWLATDAPPFQLTTTLDGC-DDWLSGHG-PSRHM 169

[Close]

BLAST of Sed0026545 vs. ExPASy Swiss-Prot
Match: O65660 (PLAT domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=PLAT1 PE=1 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.2e-41
Identity = 79/158 (50.00%), Postives = 107/158 (67.72%), Query Frame = 0


Query: 1   MAPRCLCIPTVFIALFLSAMADNSHD-KCVYTFYVKTGSAIKGGTDAKISVTVSDASGQW 60
           MA R + +P + +   +SA+A    D  CVYTFY++TGS  K GTD+ IS  + D  G +
Sbjct: 1   MARRDVLLPFLLLLATVSAVAFAEDDPDCVYTFYLRTGSIWKAGTDSIISARIYDKDGDY 60

Query: 61  VAISDLESW-GIMEQGHDYFERSNLDIFSGRGACIEAPLCRLNLTSDGSGAHHGWFCEYV 120
           + I +L++W G+M   ++YFER NLDIFSGR  C+ +P+C LNLTSDGSG HHGW+  YV
Sbjct: 61  IGIKNLQAWAGLMGPDYNYFERGNLDIFSGRAPCLPSPICALNLTSDGSGDHHGWYVNYV 120

Query: 121 EMTLTGPHRPCSQTAFHVDQWLATDAPPYQLTALLDGC 157
           E+T  G H  CS   F ++QWLATD  PY+LTA+ + C
Sbjct: 121 EITTAGVHAQCSTQDFEIEQWLATDTSPYELTAVRNNC 158

[Close]

BLAST of Sed0026545 vs. ExPASy Swiss-Prot
Match: Q9SIE7 (PLAT domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PLAT2 PE=2 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.0e-40
Identity = 74/139 (53.24%), Postives = 101/139 (72.66%), Query Frame = 0


Query: 19  AMADNSHDKCVYTFYVKTGSAIKGGTDAKISVTVSDASGQWVAISDLESW-GIMEQGHDY 78
           A+AD+  D CVYTF+++TGS  K GTD+ IS  V D  G ++ I +LE+W G+M  G++Y
Sbjct: 23  ALADDEAD-CVYTFFLRTGSTFKAGTDSIISARVYDKYGDYIGIRNLEAWGGLMGPGYNY 82

Query: 79  FERSNLDIFSGRGACIEAPLCRLNLTSDGSGAHHGWFCEYVEMTLTGPHRPCSQTAFHVD 138
           +ER NLDIFSG+  C+ +P+C LNLTSDGSG HHGW+  YVE+T  G H  CS  +F V+
Sbjct: 83  YERGNLDIFSGKAPCLPSPVCSLNLTSDGSGDHHGWYVNYVEVTTAGVHAKCSYQSFDVE 142

Query: 139 QWLATDAPPYQLTALLDGC 157
           QWLA+D  PY+L+A+ + C
Sbjct: 143 QWLASDTSPYELSAVRNNC 160

[Close]

BLAST of Sed0026545 vs. ExPASy Swiss-Prot
Match: Q2V2V3 (PLAT domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=PLAT3 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.7e-30
Identity = 61/104 (58.65%), Postives = 76/104 (73.08%), Query Frame = 0


Query: 48  ISVTVSDASGQWVAISDLESW-GIMEQGHDYFERSNLDIFSGRGACIEAPLCRLNLTSDG 107
           +S+ + D+ GQ   ISDL SW G+M   HDYFER NLDIFSG G+C+  P+C +NLTSDG
Sbjct: 1   MSLRLYDSYGQDAVISDLVSWGGLMGPFHDYFERGNLDIFSGLGSCLSGPVCAMNLTSDG 60

Query: 108 SGAHHGWFCEYVEMTLT-GPHRPCSQTAFHVDQWLATDAPPYQL 150
           SG HHGW+C YVE+T++    R CSQ  F V+QWLA DA PY+L
Sbjct: 61  SGDHHGWYCNYVEVTMSESRRRSCSQEKFEVEQWLARDASPYEL 104

[Close]

BLAST of Sed0026545 vs. ExPASy TrEMBL
Match: A0A6J1H1X8 (PLAT domain-containing protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111459298 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 7.4e-74
Identity = 137/186 (73.66%), Postives = 157/186 (84.41%), Query Frame = 0


Query: 1   MAPRCLCIPTVFIALFLSAMADNSHDKCVYTFYVKTGSAIKGGTDAKISVTVSDASGQWV 60
           MAPRCL    +FIALFLSA+A N+ +KCVYTFYVKTGS +KGGTDA ISVT+SDA+GQ V
Sbjct: 1   MAPRCLFFSLIFIALFLSALARNTKEKCVYTFYVKTGSVLKGGTDAMISVTISDANGQSV 60

Query: 61  AISDLESWGIMEQGHDYFERSNLDIFSGRGACIEAPLCRLNLTSDGSGAHHGWFCEYVEM 120
            I+DLESWG+ME+ HDYFER N+DIFSGRG CIEAPLCRLNLTSDGSGAHHGWFC+Y+E+
Sbjct: 61  EIADLESWGLMEKNHDYFERDNVDIFSGRGPCIEAPLCRLNLTSDGSGAHHGWFCDYLEV 120

Query: 121 TLTGPHRPCSQTAFHVDQWLATDAPPYQLTALLDGCGDDEIRGHGRPTRH------MVIK 180
           T TGPHR CSQTAF+VDQWLATDAPP+QLT +LDGC DD I+GHG  +RH      +V  
Sbjct: 121 TSTGPHRSCSQTAFYVDQWLATDAPPFQLTTILDGC-DDWIKGHGE-SRHTSSGKLVVSG 180

[Close]

BLAST of Sed0026545 vs. ExPASy TrEMBL
Match: A0A6J1K6M5 (PLAT domain-containing protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111490681 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 6.2e-73
Identity = 136/186 (73.12%), Postives = 156/186 (83.87%), Query Frame = 0


Query: 1   MAPRCLCIPTVFIALFLSAMADNSHDKCVYTFYVKTGSAIKGGTDAKISVTVSDASGQWV 60
           MAPRCL    +FIALFLSA+A N+ +KCVYTFYVKTGS +KGGTDA ISVT+SDA+GQ V
Sbjct: 1   MAPRCLFFSLIFIALFLSALARNTKEKCVYTFYVKTGSVLKGGTDAIISVTISDANGQSV 60

Query: 61  AISDLESWGIMEQGHDYFERSNLDIFSGRGACIEAPLCRLNLTSDGSGAHHGWFCEYVEM 120
            I+DLESWG+ME+ HDYFER N+DIFSGRG CIEAPLCRLNLTSDGSGAHHGWFC+Y+E+
Sbjct: 61  EIADLESWGLMEKNHDYFERDNVDIFSGRGPCIEAPLCRLNLTSDGSGAHHGWFCDYLEV 120

Query: 121 TLTGPHRPCSQTAFHVDQWLATDAPPYQLTALLDGCGDDEIRGHGRPTRH------MVIK 180
           T TGPHR CSQTAF+VDQWLATDAPP+QLT +LDGC DD I+GH   +RH      +V  
Sbjct: 121 TSTGPHRSCSQTAFYVDQWLATDAPPFQLTTILDGC-DDWIKGH-EASRHTSRGKLVVSG 180

[Close]

BLAST of Sed0026545 vs. ExPASy TrEMBL
Match: A0A6J1DZ35 (PLAT domain-containing protein 3-like OS=Momordica charantia OX=3673 GN=LOC111025926 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 1.1e-72
Identity = 132/187 (70.59%), Postives = 157/187 (83.96%), Query Frame = 0


Query: 1   MAPRCLCIPTVFIALFLSAMADNSHDKCVYTFYVKTGSAIKGGTDAKISVTVSDASGQWV 60
           MAP  LC   VFIALFLSAMA +SHDKCVYTFYV+TGS +KGGTD+KIS+T+ D+ GQ V
Sbjct: 1   MAPPSLCFSIVFIALFLSAMAGDSHDKCVYTFYVRTGSILKGGTDSKISITLGDSFGQSV 60

Query: 61  AISDLESWGIMEQGHDYFERSNLDIFSGRGACIEAPLCRLNLTSDGSGAHHGWFCEYVEM 120
           +ISDLESWG+M  GHDYFER ++D+FSGRGACI+AP+CRLNLTSDGSG HHGW+C+YVE+
Sbjct: 61  SISDLESWGLMGPGHDYFERDSVDVFSGRGACIDAPVCRLNLTSDGSGPHHGWYCDYVEV 120

Query: 121 TLTGPHRPCSQTAFHVDQWLATDAPPYQLTALLDGCGDDEIRGHGRPTRHM------VIK 180
           T TGPHR CSQTAF+VDQWLATD PP+QLT +LDGC +D +RGHG P++HM      V  
Sbjct: 121 TSTGPHRACSQTAFYVDQWLATDVPPFQLTTILDGC-EDWVRGHG-PSKHMNSRRLVVSS 180

Query: 181 SKASASS 182
           SK +ASS
Sbjct: 181 SKKAASS 185

[Close]

BLAST of Sed0026545 vs. ExPASy TrEMBL
Match: A0A5A7TGT6 (Lipoxygenase, LH2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001120 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 1.1e-69
Identity = 124/171 (72.51%), Postives = 144/171 (84.21%), Query Frame = 0


Query: 1   MAPRCLCIPTVFIALFLSAMADNSHDKCVYTFYVKTGSAIKGGTDAKISVTVSDASGQWV 60
           MA   LC   +FIALF SAMAD S +KCVYT YVKTGS +KGGTD+KISV + D+ GQ V
Sbjct: 1   MASSSLCFSIIFIALFFSAMADKSSEKCVYTLYVKTGSILKGGTDSKISVKLGDSRGQSV 60

Query: 61  AISDLESWGIMEQGHDYFERSNLDIFSGRGACIEAPLCRLNLTSDGSGAHHGWFCEYVEM 120
            ISDLESWG+M+QGHDYFER N+DIFSGRG C+E+P+CRLNLTSDGSG+HHGW+C+YVE+
Sbjct: 61  EISDLESWGLMKQGHDYFERDNIDIFSGRGVCLESPVCRLNLTSDGSGSHHGWYCDYVEV 120

Query: 121 TLTGPHRPCSQTAFHVDQWLATDAPPYQLTALLDGCGDDEIRGHGRPTRHM 172
           T  GPHR CSQTAF+VDQWLATDAPP+QLT  LDGC DD + GHG P+RHM
Sbjct: 121 TSAGPHRACSQTAFYVDQWLATDAPPFQLTTTLDGC-DDWLSGHG-PSRHM 169

[Close]

BLAST of Sed0026545 vs. ExPASy TrEMBL
Match: A0A1S3AUB5 (uncharacterized protein LOC103482902 OS=Cucumis melo OX=3656 GN=LOC103482902 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 1.1e-69
Identity = 124/171 (72.51%), Postives = 144/171 (84.21%), Query Frame = 0


Query: 1   MAPRCLCIPTVFIALFLSAMADNSHDKCVYTFYVKTGSAIKGGTDAKISVTVSDASGQWV 60
           MA   LC   +FIALF SAMAD S +KCVYT YVKTGS +KGGTD+KISV + D+ GQ V
Sbjct: 1   MASSSLCFSIIFIALFFSAMADKSSEKCVYTLYVKTGSILKGGTDSKISVKLGDSRGQSV 60

Query: 61  AISDLESWGIMEQGHDYFERSNLDIFSGRGACIEAPLCRLNLTSDGSGAHHGWFCEYVEM 120
            ISDLESWG+M+QGHDYFER N+DIFSGRG C+E+P+CRLNLTSDGSG+HHGW+C+YVE+
Sbjct: 61  EISDLESWGLMKQGHDYFERDNIDIFSGRGVCLESPVCRLNLTSDGSGSHHGWYCDYVEV 120

Query: 121 TLTGPHRPCSQTAFHVDQWLATDAPPYQLTALLDGCGDDEIRGHGRPTRHM 172
           T  GPHR CSQTAF+VDQWLATDAPP+QLT  LDGC DD + GHG P+RHM
Sbjct: 121 TSAGPHRACSQTAFYVDQWLATDAPPFQLTTTLDGC-DDWLSGHG-PSRHM 169

[Close]

BLAST of Sed0026545 vs. TAIR 10
Match: AT4G39730.1 (Lipase/lipooxygenase, PLAT/LH2 family protein )

HSP 1 Score: 171.0 bits (432), Expect = 8.7e-43
Identity = 79/158 (50.00%), Postives = 107/158 (67.72%), Query Frame = 0


Query: 1   MAPRCLCIPTVFIALFLSAMADNSHD-KCVYTFYVKTGSAIKGGTDAKISVTVSDASGQW 60
           MA R + +P + +   +SA+A    D  CVYTFY++TGS  K GTD+ IS  + D  G +
Sbjct: 1   MARRDVLLPFLLLLATVSAVAFAEDDPDCVYTFYLRTGSIWKAGTDSIISARIYDKDGDY 60

Query: 61  VAISDLESW-GIMEQGHDYFERSNLDIFSGRGACIEAPLCRLNLTSDGSGAHHGWFCEYV 120
           + I +L++W G+M   ++YFER NLDIFSGR  C+ +P+C LNLTSDGSG HHGW+  YV
Sbjct: 61  IGIKNLQAWAGLMGPDYNYFERGNLDIFSGRAPCLPSPICALNLTSDGSGDHHGWYVNYV 120

Query: 121 EMTLTGPHRPCSQTAFHVDQWLATDAPPYQLTALLDGC 157
           E+T  G H  CS   F ++QWLATD  PY+LTA+ + C
Sbjct: 121 EITTAGVHAQCSTQDFEIEQWLATDTSPYELTAVRNNC 158

[Close]

BLAST of Sed0026545 vs. TAIR 10
Match: AT2G22170.1 (Lipase/lipooxygenase, PLAT/LH2 family protein )

HSP 1 Score: 167.9 bits (424), Expect = 7.3e-42
Identity = 74/139 (53.24%), Postives = 101/139 (72.66%), Query Frame = 0


Query: 19  AMADNSHDKCVYTFYVKTGSAIKGGTDAKISVTVSDASGQWVAISDLESW-GIMEQGHDY 78
           A+AD+  D CVYTF+++TGS  K GTD+ IS  V D  G ++ I +LE+W G+M  G++Y
Sbjct: 23  ALADDEAD-CVYTFFLRTGSTFKAGTDSIISARVYDKYGDYIGIRNLEAWGGLMGPGYNY 82

Query: 79  FERSNLDIFSGRGACIEAPLCRLNLTSDGSGAHHGWFCEYVEMTLTGPHRPCSQTAFHVD 138
           +ER NLDIFSG+  C+ +P+C LNLTSDGSG HHGW+  YVE+T  G H  CS  +F V+
Sbjct: 83  YERGNLDIFSGKAPCLPSPVCSLNLTSDGSGDHHGWYVNYVEVTTAGVHAKCSYQSFDVE 142

Query: 139 QWLATDAPPYQLTALLDGC 157
           QWLA+D  PY+L+A+ + C
Sbjct: 143 QWLASDTSPYELSAVRNNC 160

[Close]

BLAST of Sed0026545 vs. TAIR 10
Match: AT5G65158.1 (Lipase/lipooxygenase, PLAT/LH2 family protein )

HSP 1 Score: 134.0 bits (336), Expect = 1.2e-31
Identity = 61/104 (58.65%), Postives = 76/104 (73.08%), Query Frame = 0


Query: 48  ISVTVSDASGQWVAISDLESW-GIMEQGHDYFERSNLDIFSGRGACIEAPLCRLNLTSDG 107
           +S+ + D+ GQ   ISDL SW G+M   HDYFER NLDIFSG G+C+  P+C +NLTSDG
Sbjct: 1   MSLRLYDSYGQDAVISDLVSWGGLMGPFHDYFERGNLDIFSGLGSCLSGPVCAMNLTSDG 60

Query: 108 SGAHHGWFCEYVEMTLT-GPHRPCSQTAFHVDQWLATDAPPYQL 150
           SG HHGW+C YVE+T++    R CSQ  F V+QWLA DA PY+L
Sbjct: 61  SGDHHGWYCNYVEVTMSESRRRSCSQEKFEVEQWLARDASPYEL 104

The following BLAST results are available for this feature:

BLAST of Sed0026545 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022957900.1	1.5e-73	73.66	PLAT domain-containing protein 3-like [Cucurbita moschata] >KAG6605634.1 PLAT do...	[more]
XP_023534497.1	3.4e-73	73.66	PLAT domain-containing protein 3-like [Cucurbita pepo subsp. pepo]	[more]
XP_022994993.1	1.3e-72	73.12	PLAT domain-containing protein 3-like [Cucurbita maxima]	[more]
XP_022159540.1	2.2e-72	70.59	PLAT domain-containing protein 3-like [Momordica charantia] >XP_022159543.1 PLAT...	[more]
KAA0042612.1	2.3e-69	72.51	Lipoxygenase, LH2 [Cucumis melo var. makuwa] >TYK06014.1 Lipoxygenase, LH2 [Cucu...	[more]

BLAST of Sed0026545 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65660	1.2e-41	50.00	PLAT domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=PLAT1 PE=1 S...	[more]
Q9SIE7	1.0e-40	53.24	PLAT domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PLAT2 PE=2 S...	[more]
Q2V2V3	1.7e-30	58.65	PLAT domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=PLAT3 PE=4 S...	[more]

BLAST of Sed0026545 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H1X8	7.4e-74	73.66	PLAT domain-containing protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111459...	[more]
A0A6J1K6M5	6.2e-73	73.12	PLAT domain-containing protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC11149068...	[more]
A0A6J1DZ35	1.1e-72	70.59	PLAT domain-containing protein 3-like OS=Momordica charantia OX=3673 GN=LOC11102...	[more]
A0A5A7TGT6	1.1e-69	72.51	Lipoxygenase, LH2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00...	[more]
A0A1S3AUB5	1.1e-69	72.51	uncharacterized protein LOC103482902 OS=Cucumis melo OX=3656 GN=LOC103482902 PE=...	[more]

BLAST of Sed0026545 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39730.1	8.7e-43	50.00	Lipase/lipooxygenase, PLAT/LH2 family protein	[more]
AT2G22170.1	7.3e-42	53.24	Lipase/lipooxygenase, PLAT/LH2 family protein	[more]
AT5G65158.1	1.2e-31	58.65	Lipase/lipooxygenase, PLAT/LH2 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.60.60.20	PLAT/LH2 domain	coord: 16..145 e-value: 5.6E-17 score: 63.7
None	No IPR available	PANTHER	PTHR31718:SF47	PLAT DOMAIN-CONTAINING PROTEIN 3-LIKE	coord: 11..179
None	No IPR available	PANTHER	PTHR31718	FAMILY NOT NAMED	coord: 11..179
IPR001024	PLAT/LH2 domain	PFAM	PF01477	PLAT	coord: 30..143 e-value: 2.4E-10 score: 41.0
IPR001024	PLAT/LH2 domain	PROSITE	PS50095	PLAT	coord: 28..154 score: 19.441536
IPR036392	PLAT/LH2 domain superfamily	SUPERFAMILY	49723	Lipase/lipooxygenase domain (PLAT/LH2 domain)	coord: 29..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0026545.1	Sed0026545.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005515	protein binding