Sed0026514 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAATAACTCATTTTCTCTCTCTAATTTTTCTCTCCAAACATCCAAAAAATTTCAAGTATCAGAAAAAACAAGAACCAAAAGGTAATTTTTTTTTTTCCTCTTTTTTAATTTTTTCCTTTTTAGAGTCTCGATATGAATTTAATTAAAATGTGTATTTTTATTTTTTGTTTAATAGAGTGGTTAGGCCTGCTGCATTAATTGAAATAATAATAATAATAATAATAATAATTTCAAACCCCAAAAACGGTTAGTTAAAAAGGAGTTATGTCCTCGGCTTTTAGTAGAATTAGCAGGCAGGCCGGCCGACAGACAAAGATTTCTCCTTTTTGTGCATGTTTTTTTTTTTTGTTTTATAAAAAGAAGTGTTGTGTTTTTTTTAAGGAGAGGGTTTTTTTTTTTTTTTCTGTTGCTGAATATATATAGTTTGGGGATTTTTATGAAATTATAATGAAGCTTAGAAAGAGAGCTTCAATGGAGGCTAATTATAAAGGTGGAGAAATTAGAAGAGTTCATGTTCTTTACTTTCTTACCCGGATGGGACACGTGGAACAACCCCATCTCCTCCGTGTTCGTCATCTCGTCGGCGGTAGCGGTGGCGGCGGCGTTTATCTCCGAGGTATGAGATGTGTTTTTGTTTCAAGAAATGGCTGAGTTATGTCTTATGGTTTTAAATGGAGTTTTGTTTCTTTGTTTAAAGAAATGTCTGAGTCTGTTCATTAATCTCATTTTATATCTCAGTATCATGAGTTGAGTTTGATTATAGAGTGATAGATTGAATTATCGAATAGTACTAACAAAAAGTATAGTTTTCAGTAACATAATATTAAGTAACCAAGAAGTTATTGAATTCAAATATCGATAAAAAAGAAAAATCATAGATAGTTAAAATGATAATTGATGTCTTTTGTTTTCAACGACAATGAATTTCTACTATGACATTATGCGAATGAATTTGAAATCAACATTCAAAAATAGTTCATCTAACTAAACTTTTTTTTTTTTTTTTTTTGAAATTCTAACCTTTTTTACTGTTCTTACCATTGAATGAGTTTTTCCATAAAAGAAAATAGGGTGGTAATTAAAGTTACTGATCCATCTCTCTTCTTTTTCACATGGAATGGCAAATTTCTTTTGGTTAAAGAAATAACTCATTAGTTCACTTCACACGCTAAGAATATGAATAAATAATCGATACTTCAATTGTGATTTTATTAAAAATAGTATTAAAGTATATACAAATTTTATCAAGCACTTCTTCTCCAACTAATATTGATAGTTAAGTATTAAGTGAAATTTAAATAAAGTGACATCAAAGTAATGTAGGTCAACAATAATTAATATTATCTTCACCAAAATGTCAGAAGGGTGAATCTCTATACATTAAAATGTATTTGAAATAAAAAGATATATATTTGAAATTTTGTTAGAATTTAACATAATCTCATATGTAATGATTTTTTTTTTTTTTTTCTATTTTCTAAAGATGTCAAGAGATGGCTAGGGGATTTGAGAGGGAAGGCCATGCCAGAAGCCTTCTCATGGTCATACAAAAGGTAAGCAAATATTTATAAAATTTAAAATTTAAAATTATTAAAAATAAAAATAAAAAAAAACCATTTTTTCCACCATTATTGTCCTCTCTCTTCATTAAAAAAAGTTTTTTTTTTTTCCTTGTTCCATAAATTGATAATAACTTAAAAAATGCAGAAAGTACAAAACAGGATACGTTTGGCAAGACTTGATGGATGACGATCTCATAACTCCAATTTCTGACAACGAATATGTCCTTCAAGGCTCCCAAATAATTCCCACTACTCTTTTTGGTAATTTCCACTCGTGACCCTTTAAAAAATAAAAATAAAAATATTATTTCTTTTTTCATTTTAATAAATTCTCCTCTTTTTTATTTTTCAAACAGATCATAATTCTCTGGAGAGGAAAAAATCAACTTTCAAAGTGGAGTTAGAATCGAATGAAGATTTTGGGTTGAAACGGCGACTGAAGGAAGCATCTCCGCCGTGCGATTCGGAGAGATCGACGGTGACTGACGATGGAGATTCGATGAAGGTTGAAGAAGAGAGTAAGAACTTGGAGATACCAAAACAAGGAGTAGAAGAAGAAAGTGAGGGATTTAAGACACAATATTCTTCTTTGTATGCAAAATTGGTGAATAGCAAAAAGGAGAAAGATAAAGATAAGGAGCACATGGAGAAGGAAGGTAATTTTTGTTTATTTTTAGTTGTTCTTTCAGTTAAAATAAAGGAAAAAGTTCAAAATATATTTTTCAACTATTCTTTTTTTTAATTAGTGAGAGTGTCTAGCTAATTTATGGACAAATTATTTTCACAGAATAAATAATTGACTCTATGATTTACAAAAAATTTCTATACACCATAATTAAACCTACAATATTTTGAATTTTTTAAGACCAATTTTACTACTATGTCAATTAACATTTATGTTTTGACTAGATAAAATTAAGGTTAGAGGTTGACTTTTAGTATTTATTCCAATGATGAGTGTTTTTGGATTATTATAATTAATAATATTTTTTTAAAGACTTTAAATAATTGAGTTTCAAAAAATGCTCAAAGAATTGATGGGACAGATATTTTAATTGTTGAAAAGTCTTTTCTCACTTATATATTGACATCCCTCACATTAATTAACGTCTTGGCAAAAAAAATTTATATATGTATGGGTAGTTTTGTTATCAACCATGGTTGATGTTAGAATAAACTCTAATAAAATTATTATTTTTACAACTTCATTCTCCAATTTCCAAATATTATTTTGTAATAAAGAAACTTACAAATAAATAAATAAGTGTGACTAAACAAACTTCAACTAAAGTTTATCATTATTATTATTTTGTTGAAAGAATCAAAATAAATAATTGTCTAATCTAAATACTATGTTCATAATTATTTTTTAAAAAAACCATGTTGATAAATTTATGTATTATTTGAAATGTGATTATATATAGGTGGACCCACAGCCACGTCAACAGTTACATCATCCCAACCTGCATTTACAAAGAGCAAGAGCTGCTCAAGTGGAGCCTCCCACGTGATTCGTCAATGGATCACGTGCGGGGCGGTGGATACAAACGACGCCGTTTTGGTCAAGAATTCATCTCCCAAAGATCCCGCATCGGAAAAACTCAAAAACGACGCCGTGTTGGGCGGCTCCGCCCGTGTCGTCGGAAATTCTTGGGACGGCAGCCTCGATATCCGCCGCCACCAAACTTCTCGGTGATTTATCTAATTTTCACATTAAAAGAAAAGGCTCAATTTTTCTTTTTCTTTTTCTTTTTTTTAAAAATAGTTTTATTTTAGAGAATTTACCATCAACTTCATATTTTATATCTTCTATTATATTTATAGCAGATTTTTAAAATAATTTATATAGCACTCTAATTTCTATCACTCAACTAGTGATAGATTTCAATTTAAATTTTTATCACCGATAGAAAATTTAAATAATGATAAAATGAATTTTTCATTGATTAAATTCTTATTCAACCAGTAATAGAAACTCAATTCGAATTTTCAACTACAAATAAATTAGTTTTGATTTTATGCTAATATAAAAATATCTTATCATTTTTTTTATACATGCAAAGTTCTCTGTATTTTATTTATTATTATTATTTTTTCATAGTTTAATCAAAATTTTCCATCCTTTTTCGTAAAATAAGTGATGCCTTTTATTTTCTTGACCATGAATAGATTGATTGGTGTTTTTTTCTTTTAAGTATTGATTGATGTTCTTTATTTTTTTTATTTTATTTTATTGAGGAGATGTTCTCTATTTATCTTGTGTTAGTAAAGTTGTCCCTTGAAAAATATTCATATTCATGAATAAGTTTTATTTCTTGCTTATGTGTTATCGTGACACCAAATAATAATAAGGTGACAAGTATTTTAAGATGGAAATTTAAACATTATTTTTAGTCGATAATTAATTAATTTAATTTTTTTCTACAATAGTATATTGAGATATTTGAACCACATACTGGTAATTGCTAGTATATCAAGGTTTCATTGAGTTGTTAATATTATTTGATAAATAATATACACTAATCATGTTAAGATAAAAACATTGATATAATGTCAAGACAAAAATGTTACAATGATTTTTTTTTTTTTGGTATTTACAGAAAAAGCTTCGACGACTCAAGAAAGAAGAGGCAAAAGGAGAACGAAAGAAAGACGACGACCACCTCGACTTACAAGCCCATGACAGGACCCAACTGCTCGTAAGTTTTCCTCATGTTCATCAATCTTGAAAGATAGCTTTTCCAATTTCCACCATTTTTTTACTTTCGTGGAAATGAGTTTGACTTTTTGGTTTGTCAACGCCAACACAAGTCACTCTCTCAACAATATTTTAAAAAGACATGGCCTTACAAGAGTGGAAGAAGCATGTTTGAAAAGTCTTCTTTTCTAAAATTGTAGAAACCACCCTTTGAATAGTATAACTAATTATTTTAAAGTAAGAGTTTACAAACTTCAATTCCTACACTTTAATTGTTATTTTTTAAAAAAAATAATCTTTTGATATCCAAACTTACTCAAAGTCATCTACATATTTAATTTGTTGTTCGACCTTTCAAAACTAATAACCATACATTTTTGTGAGTCTAATTGAACAATTTTATTGGTTGACTTAGGGTCTCCAAAATATGTTCATTTTATAATTTTATATTCAAACCACACAAATAATTAGTTTAGTGTATTCATATTCAATTTTTAAAACAAATTCTAGCTTGCAACCCTTTTTGCTTATGTATATTTTTTTGGTTGAGTAAAAGCTATCTATTTATCGACTATAATATTGTAATAAGATAAAGTTGACATTTTGAGAAGGTTTAGACAGTGAAATGAAATGATAAAATAATCTTGAGAGCTAAATACTAACATAACAAATACTTTTCAAAGAGATGAGAGGTCTGACATTTTTTAAATAATACATTTTATTAATTACCATTATATATTTTTTATATATATATAAAAAAATACAGGCTTTGTGGGAAGACATTCAAGCCAGAGAAGATGCATTCACACATGAAATCATGTAGAGGACTTAAGTCAATGACCAAGACTGCTTCAACATCTGATCATAAAACAACATCGTTTAAGTCAACATCTTCCGACAAGGAATTGACTTCCAACTACTTGTTGACCAACTGAGCCGGC AAAATAACTCATTTTCTCTCTCTAATTTTTCTCTCCAAACATCCAAAAAATTTCAAGTATCAGAAAAAACAAGAACCAAAAGAAAGAGAGCTTCAATGGAGGCTAATTATAAAGGTGGAGAAATTAGAAGAGTTCATGTTCTTTACTTTCTTACCCGGATGGGACACGTGGAACAACCCCATCTCCTCCGTGTTCGTCATCTCGTCGGCGGTAGCGGTGGCGGCGGCGTTTATCTCCGAGATGTCAAGAGATGGCTAGGGGATTTGAGAGGGAAGGCCATGCCAGAAGCCTTCTCATGGTCATACAAAAGAAAGTACAAAACAGGATACGTTTGGCAAGACTTGATGGATGACGATCTCATAACTCCAATTTCTGACAACGAATATGTCCTTCAAGGCTCCCAAATAATTCCCACTACTCTTTTTGATCATAATTCTCTGGAGAGGAAAAAATCAACTTTCAAAGTGGAGTTAGAATCGAATGAAGATTTTGGGTTGAAACGGCGACTGAAGGAAGCATCTCCGCCGTGCGATTCGGAGAGATCGACGGTGACTGACGATGGAGATTCGATGAAGGTTGAAGAAGAGAGTAAGAACTTGGAGATACCAAAACAAGGAGTAGAAGAAGAAAGTGAGGGATTTAAGACACAATATTCTTCTTTGTATGCAAAATTGGTGAATAGCAAAAAGGAGAAAGATAAAGATAAGGAGCACATGGAGAAGGAAGGTGGACCCACAGCCACGTCAACAGTTACATCATCCCAACCTGCATTTACAAAGAGCAAGAGCTGCTCAAGTGGAGCCTCCCACGTGATTCGTCAATGGATCACGTGCGGGGCGGTGGATACAAACGACGCCGTTTTGGTCAAGAATTCATCTCCCAAAGATCCCGCATCGGAAAAACTCAAAAACGACGCCGTGTTGGGCGGCTCCGCCCGTGTCGTCGGAAATTCTTGGGACGGCAGCCTCGATATCCGCCGCCACCAAACTTCTCGAAAAAGCTTCGACGACTCAAGAAAGAAGAGGCAAAAGGAGAACGAAAGAAAGACGACGACCACCTCGACTTACAAGCCCATGACAGGACCCAACTGCTCGCTTTGTGGGAAGACATTCAAGCCAGAGAAGATGCATTCACACATGAAATCATGTAGAGGACTTAAGTCAATGACCAAGACTGCTTCAACATCTGATCATAAAACAACATCGTTTAAGTCAACATCTTCCGACAAGGAATTGACTTCCAACTACTTGTTGACCAACTGAGCCGGC ATGGAGGCTAATTATAAAGGTGGAGAAATTAGAAGAGTTCATGTTCTTTACTTTCTTACCCGGATGGGACACGTGGAACAACCCCATCTCCTCCGTGTTCGTCATCTCGTCGGCGGTAGCGGTGGCGGCGGCGTTTATCTCCGAGATGTCAAGAGATGGCTAGGGGATTTGAGAGGGAAGGCCATGCCAGAAGCCTTCTCATGGTCATACAAAAGAAAGTACAAAACAGGATACGTTTGGCAAGACTTGATGGATGACGATCTCATAACTCCAATTTCTGACAACGAATATGTCCTTCAAGGCTCCCAAATAATTCCCACTACTCTTTTTGATCATAATTCTCTGGAGAGGAAAAAATCAACTTTCAAAGTGGAGTTAGAATCGAATGAAGATTTTGGGTTGAAACGGCGACTGAAGGAAGCATCTCCGCCGTGCGATTCGGAGAGATCGACGGTGACTGACGATGGAGATTCGATGAAGGTTGAAGAAGAGAGTAAGAACTTGGAGATACCAAAACAAGGAGTAGAAGAAGAAAGTGAGGGATTTAAGACACAATATTCTTCTTTGTATGCAAAATTGGTGAATAGCAAAAAGGAGAAAGATAAAGATAAGGAGCACATGGAGAAGGAAGGTGGACCCACAGCCACGTCAACAGTTACATCATCCCAACCTGCATTTACAAAGAGCAAGAGCTGCTCAAGTGGAGCCTCCCACGTGATTCGTCAATGGATCACGTGCGGGGCGGTGGATACAAACGACGCCGTTTTGGTCAAGAATTCATCTCCCAAAGATCCCGCATCGGAAAAACTCAAAAACGACGCCGTGTTGGGCGGCTCCGCCCGTGTCGTCGGAAATTCTTGGGACGGCAGCCTCGATATCCGCCGCCACCAAACTTCTCGAAAAAGCTTCGACGACTCAAGAAAGAAGAGGCAAAAGGAGAACGAAAGAAAGACGACGACCACCTCGACTTACAAGCCCATGACAGGACCCAACTGCTCGCTTTGTGGGAAGACATTCAAGCCAGAGAAGATGCATTCACACATGAAATCATGTAGAGGACTTAAGTCAATGACCAAGACTGCTTCAACATCTGATCATAAAACAACATCGTTTAAGTCAACATCTTCCGACAAGGAATTGACTTCCAACTACTTGTTGACCAACTGA MEANYKGGEIRRVHVLYFLTRMGHVEQPHLLRVRHLVGGSGGGGVYLRDVKRWLGDLRGKAMPEAFSWSYKRKYKTGYVWQDLMDDDLITPISDNEYVLQGSQIIPTTLFDHNSLERKKSTFKVELESNEDFGLKRRLKEASPPCDSERSTVTDDGDSMKVEEESKNLEIPKQGVEEESEGFKTQYSSLYAKLVNSKKEKDKDKEHMEKEGGPTATSTVTSSQPAFTKSKSCSSGASHVIRQWITCGAVDTNDAVLVKNSSPKDPASEKLKNDAVLGGSARVVGNSWDGSLDIRRHQTSRKSFDDSRKKRQKENERKTTTTSTYKPMTGPNCSLCGKTFKPEKMHSHMKSCRGLKSMTKTASTSDHKTTSFKSTSSDKELTSNYLLTN Homology
BLAST of Sed0026514 vs. NCBI nr
Match: XP_038899908.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC120087098 [Benincasa hispida]) HSP 1 Score: 525.4 bits (1352), Expect = 4.2e-145 Identity = 306/427 (71.66%), Postives = 339/427 (79.39%), Query Frame = 0
BLAST of Sed0026514 vs. NCBI nr
Match: XP_008461226.1 (PREDICTED: protein UPSTREAM OF FLC isoform X1 [Cucumis melo]) HSP 1 Score: 505.4 bits (1300), Expect = 4.5e-139 Identity = 301/416 (72.36%), Postives = 331/416 (79.57%), Query Frame = 0
BLAST of Sed0026514 vs. NCBI nr
Match: XP_008461228.1 (PREDICTED: protein UPSTREAM OF FLC isoform X3 [Cucumis melo] >XP_008461229.1 PREDICTED: protein UPSTREAM OF FLC isoform X3 [Cucumis melo]) HSP 1 Score: 505.4 bits (1300), Expect = 4.5e-139 Identity = 301/416 (72.36%), Postives = 331/416 (79.57%), Query Frame = 0
BLAST of Sed0026514 vs. NCBI nr
Match: XP_008461227.1 (PREDICTED: uncharacterized protein LOC103499876 isoform X2 [Cucumis melo]) HSP 1 Score: 493.8 bits (1270), Expect = 1.3e-135 Identity = 298/416 (71.63%), Postives = 328/416 (78.85%), Query Frame = 0
BLAST of Sed0026514 vs. NCBI nr
Match: XP_004136105.3 (uncharacterized protein LOC101207468 isoform X1 [Cucumis sativus]) HSP 1 Score: 481.9 bits (1239), Expect = 5.3e-132 Identity = 293/417 (70.26%), Postives = 323/417 (77.46%), Query Frame = 0
BLAST of Sed0026514 vs. ExPASy Swiss-Prot
Match: Q9SYJ8 (Protein SOSEKI 1 OS=Arabidopsis thaliana OX=3702 GN=SOK1 PE=1 SV=1) HSP 1 Score: 220.7 bits (561), Expect = 2.9e-56 Identity = 156/369 (42.28%), Postives = 214/369 (57.99%), Query Frame = 0
BLAST of Sed0026514 vs. ExPASy Swiss-Prot
Match: A0A2R6X6S3 (Protein SOSEKI OS=Marchantia polymorpha OX=3197 GN=SOK PE=1 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 1.5e-20 Identity = 60/155 (38.71%), Postives = 90/155 (58.06%), Query Frame = 0
BLAST of Sed0026514 vs. ExPASy Swiss-Prot
Match: Q9FJF5 (Protein SOSEKI 5 OS=Arabidopsis thaliana OX=3702 GN=SOK5 PE=1 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 9.7e-20 Identity = 50/121 (41.32%), Postives = 71/121 (58.68%), Query Frame = 0
BLAST of Sed0026514 vs. ExPASy Swiss-Prot
Match: Q8GYT8 (Protein SOSEKI 3 OS=Arabidopsis thaliana OX=3702 GN=SOK3 PE=1 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 6.3e-19 Identity = 47/106 (44.34%), Postives = 69/106 (65.09%), Query Frame = 0
BLAST of Sed0026514 vs. ExPASy Swiss-Prot
Match: Q8GY65 (Protein SOSEKI 4 OS=Arabidopsis thaliana OX=3702 GN=SOK4 PE=1 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 2.6e-17 Identity = 60/172 (34.88%), Postives = 92/172 (53.49%), Query Frame = 0
BLAST of Sed0026514 vs. ExPASy TrEMBL
Match: A0A1S3CEM9 (protein UPSTREAM OF FLC isoform X3 OS=Cucumis melo OX=3656 GN=LOC103499876 PE=3 SV=1) HSP 1 Score: 505.4 bits (1300), Expect = 2.2e-139 Identity = 301/416 (72.36%), Postives = 331/416 (79.57%), Query Frame = 0
BLAST of Sed0026514 vs. ExPASy TrEMBL
Match: A0A1S3CE79 (protein UPSTREAM OF FLC isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499876 PE=3 SV=1) HSP 1 Score: 505.4 bits (1300), Expect = 2.2e-139 Identity = 301/416 (72.36%), Postives = 331/416 (79.57%), Query Frame = 0
BLAST of Sed0026514 vs. ExPASy TrEMBL
Match: A0A1S3CE85 (uncharacterized protein LOC103499876 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499876 PE=3 SV=1) HSP 1 Score: 493.8 bits (1270), Expect = 6.5e-136 Identity = 298/416 (71.63%), Postives = 328/416 (78.85%), Query Frame = 0
BLAST of Sed0026514 vs. ExPASy TrEMBL
Match: A0A6J1CV58 (protein UPSTREAM OF FLC isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014499 PE=3 SV=1) HSP 1 Score: 467.2 bits (1201), Expect = 6.5e-128 Identity = 278/422 (65.88%), Postives = 314/422 (74.41%), Query Frame = 0
BLAST of Sed0026514 vs. ExPASy TrEMBL
Match: A0A6J1CUY7 (protein UPSTREAM OF FLC isoform X2 OS=Momordica charantia OX=3673 GN=LOC111014499 PE=3 SV=1) HSP 1 Score: 467.2 bits (1201), Expect = 6.5e-128 Identity = 278/422 (65.88%), Postives = 314/422 (74.41%), Query Frame = 0
BLAST of Sed0026514 vs. TAIR 10
Match: AT1G05577.1 (Domain of unknown function (DUF966) ) HSP 1 Score: 220.7 bits (561), Expect = 2.0e-57 Identity = 156/369 (42.28%), Postives = 214/369 (57.99%), Query Frame = 0
BLAST of Sed0026514 vs. TAIR 10
Match: AT5G59790.1 (Domain of unknown function (DUF966) ) HSP 1 Score: 99.4 bits (246), Expect = 6.9e-21 Identity = 50/121 (41.32%), Postives = 71/121 (58.68%), Query Frame = 0
BLAST of Sed0026514 vs. TAIR 10
Match: AT2G28150.1 (Domain of unknown function (DUF966) ) HSP 1 Score: 96.7 bits (239), Expect = 4.5e-20 Identity = 47/106 (44.34%), Postives = 69/106 (65.09%), Query Frame = 0
BLAST of Sed0026514 vs. TAIR 10
Match: AT3G46110.2 (Domain of unknown function (DUF966) ) HSP 1 Score: 91.3 bits (225), Expect = 1.9e-18 Identity = 60/172 (34.88%), Postives = 92/172 (53.49%), Query Frame = 0
BLAST of Sed0026514 vs. TAIR 10
Match: AT3G46110.1 (Domain of unknown function (DUF966) ) HSP 1 Score: 91.3 bits (225), Expect = 1.9e-18 Identity = 60/172 (34.88%), Postives = 92/172 (53.49%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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