Sed0026472 (gene) Chayote v1

Overview


Name	Sed0026472
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Tryptophan synthase
Location	LG12: 2814655 .. 2820502 (+)
RNA-Seq Expression	Sed0026472
Synteny	Sed0026472

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATTCAGCCCATCAAAACGCCAATTTTCCGCCAACAACGCAACAGTGCCCGTTTTTGGCAACTGCAGCCGCTGTAAAGCCAGAACGAAATCGAGCTGCTATAAACCTCACATTCACTCTGTATTTGAATTCGAAGAAAACCCATTCGAGAATCTGCAGTTCCACCAAAACCCTCTTTGCGAAATGGACATTGCTTTCAAATCTTCGAGGGTTCTTCCCATCAACAAGATTCCCAATTCGCTCATCTTTTCTCCACGTCCTTGCAAGGTTTCAGTCTTCCAATCCAAGCGGTTTGCTCCAATGGCTGCCCTCACAGCCTCACCTGTTCTTGGACTGACTGAAACATTCGACAAATTGAGGGAGCAAGGCAAGGTAAATGTAGTTTTGTGCTATTTCCTATGTACATTTAATTTCATTATTTTTTTAATGATTGGAAATCGGGGCTTCGCTGCACTATCCGCCTGGGGCATCCAATGTCGGGATGCAAATGAAGTTATTCTATATTGATTAGATGAAGGGAAGATCGCAGTATATAAGTGATTAACAATGAAGGCTTTTGGGTGAAACAAAAAACAAATCTCGAGCCTTTATGCCAAAATGGATAATATCATAGCATTGTATAGATACGGATTGGGTTGTCATCTTTATCTCCCACCTCGTCCCAAGGCCCGGACGCGGGAGGCAATGAGTGATTTTGCAATGAAGTTCATTTGTGGATTTCGGGACCTCTAAGAGAGCATATCTTGTTAGACCCAAAGCCTCTACTAACAAGACTGGGGATTATCTAATTTCATTTTTGAACTCTGCTCTTTCTCCGTGACTTATCTGTTATCTGGGTTGTTTGTTTGAATTTATCATTGTTTTGTTGAATTATACCTATCTTGCATTATGGTTGGTATTGGAAGGATAAATTGGTTGCATCAGGAAGAACTCGATTATCTTTTTTTTGAAACAAGGAAACCACACACGCTCCTAGGTCGGGCACCAGAGACATCGAAGGAGTAATGTCACAGGTGAGTCTCGAACCCGGGACCTTGAGGGGAGCATACACTCAAAGTCCAAGTTTTCAACCATTGTGCCACCCCTCGAGGACGGAAGAACTCGATTATCATTCATCCAAGTTCTTTCCTTCAAATGTTTTAGCCTCAAATTTAAGTTATAGTATGAGTTTGGTATCTTAACTTTCAGGTTTCTTCTGTTTAAGAAGTCCTCAATAACTCCAATTTATCTTTCACCCCACCAAAGGTTTTAACCTGCTCAAAATCAATCTTCCGTGTAATCCTTAAAATTTTAAATAATGCATCAGCATGTCATGTAAACGTAGTCATCGATAGAAACTCATTATTAGACACAAAATTTAAAGTTTAGAAATTTTTTAGAAGTTTTTTGAAGTGATTAGATGCAAATGCAACACTGAAAGTGCAAGGACATATTATGATCTTTATAAAATACTGAGATGGAATTTTACCTTAAACTTACTCTTTTTGTATAGTACCTTTGTGGTCTAATTCGATTTTTTCATTGATCAACGGTTCCTAACTAACTACATGTATGTTTTAAAGGTTGCATTGATCCCCTACATTACTGCTGGTGATCCTGATCTTTCGACCACGGCTGAAGCATTGAAAGTGCTTTCCACATGTGGATCAGATATAATTGAACTTGGTGTTCCATATTCGGATCCCTTAGCAGATGGTCCTGTTATACAGGTTCATTATTATTATTATCTTTTCCTTTCATTCATCCATTTTTAATCTATTTTTCCTTATTCAGCTGTTCTTTGAATGTTATTCTATAGGCGGCAGCTACTCGATCTTTGGCTAGAAAGACGAACTTTGATGCAATACTTTCTATGTTGAAGGGGGTAATATTGTTGTACCATGCAACTTGCTGTCTATAATATCAGCCTCTTTTCCACTTCCACTTTTGCTCTTAAATTATTTGAGGCAATAGAAAGATAAACCGAACTTGTTGACTTAAACGTGCGGCAAATCTGTTATTTTGCAAATTAGATGTAATGAATTATACCAAATGGAATAATTTAGACAGGCTATCAAGTTTTGTTTACATATGTATTTTAGCATAAATGGCATCTTGAAATCAGATGACTATGGAAATATGTTCCCAGTTCTATGTGGTTCACTGTCCTTTATTCTCTCTCATTCATGTCATTGACAGTCAAACATGCTTTCGTTATGTTTTTGACTGGTTAGGTGATTCCTGAACTATCATGTCCGGTTTCCCTGTTTACATATTATAACCCAATTCTTAAACGTGGCGTTGAAAACTTCATGATGACGATCGAAGATGCTGGTGTACGAGGTAATTTAATAAGTTCGCCGAATCTTCTTATAATGTATTAGCTTTTTTGAGGATTTTGGGTATGTAGTTTTTTTTTGGGGGGGGGGGGGGGAATGATGTTTGAATTCTTTATAAAAAGGGAGTTTGTGAATGTGTTTGTGGTAATATTGCACTTTCTTGCAGGGCTTGTGGTTCCAGATGTTCCTCTTGAGGAAACTGAAATTTTGAGAAAGGAAGCTGTAAAGCATAATATTGAACTGGTGATTTCTTTTTCTCATAAGAATTGTATAGATTATTTAAAAAGCATTCACTTACTATAACTATTTGGTTTTTTGTTTTTGGCTTTTGAAATTTAAGCCTACAACTACTGTCACACATAGTTTTTATTACTTTGATATCTAGCTTGTATTTTTTTAAAAACAAACCAAAATTTGCAAGTTAAAAAAAATAGCTTCCAAATACTTGTTTGGTTTTATGGAATTTGGTTAGAATCCACTTACTTCCTTAAGGGAAGATGAAACGATATGCACAAAATTTGAGTAAATATAAGCTTAAATTTCAAAAACCAAATATTTATGAAAAGGACCCTTAGTTTTTAGGTTTTGACTTTAGATATTTATTTTTTACTTTTAACTTAAGATACTCCATCAAAAACTTCCGGATACTATTTAAAGGGAAATAGTCCAATGCCCTTTGCCTAGTATGTGAAACATTACTTGATAAACTGCTCTTTGCAGCTCTAAAGATTAGTTTTATTACTTGGCTGAACCTGAAGAAAAAGTATATTCTGGAGTGATATGAGAGTATATATACTTTTATCTAATCATTGTTAATGCAGAAAGCAGTTGCCTTGAATGCTAGAAATTTTTTTTATCGATAAATTGTTCGACTATACTGAGCTGCATTTTTTTTTATATTGTCTATTCAACCAACTTAATGAGGAAATGAATAGCCATTTCGTTGGCTCATTCTTGTTCTATTTATTTTATTATTAAAAAACTTGTCGTTAAACCTTGAGTTGATTGCTTGTTCTTATGAATTTGATATTATTCTTTTACACTGCTAAAGGTACTCTTAACTACACCAACCACGCCAAAAGATAGGATGAAGGACATCGTTGAAGCTTCAGAAGGATTTATATATCTTGTATGGCCTTTTCTGTTTTCTATCTCTTTACATGAATATTGATTTTTATTTTTTTCATCTCATTGGAGCTTTTTGGTGTCATTCATAAAAAGATGATACTTAGACCCCCATTTGATAACCATTTTGTTTTTCATTTTTGGTTTTTAAAAATTAAACCTACAATACAACGACTACTCCAATCTCCAAATTACCCATGTTTTTAAAAACCAAACTAAAAATTGAAAACTTAAAAAAGTAACTTCCAAAAACTTGTTTTGATTTTTGGAAACTTGTTTTGATTTAAATACCTGATGAAATCCTTGGTAAAGAATTTAGGTGAAAACAAGCTAAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCGTTAGTAATTCCAAACAAAAGGATCTCAAAAAAAAAAACATTCCAAACAAAAGTATCTGCGCACAAATTTCTACCAAGTTGTAATTAAAAGACTTTAAAGGTTTTGTTTTAAAAAAAAAGACTTTAAAGGTTTCTTTTTTTAAAAAAAACTTTCATTGGGGAGGGCAAATTATTGAATCCGGCCTTTATTGCAATTGGACATTTATGATAAATGGAAGAACAAAAGACCATCATGGAGTGACTAGTGGTTGAAAAGGCATTGGAGAGCTAAGAAGTAATGAGTTTAAATCCATGGTGGTCACTTACATTTCTCATGACATTAGTCAACGTGCGCAAAATAATACAAAAAATATACTCTGTCATCATCCATGGAAATTCAAGAGGGAAGATGAAGGGATTTTTTTTATAATAGGAATTAGGCATTATTTTATCAAAAACAAACTTTTATTAGGATGAATAAATAACAAATAATAGGCAATGGGAAAAAAAGCTTTCTACAATAGAGAGCCAACAAATTAAAAAAGAAGCTTTATTTGGTGGGAGCATATTCTTTTGCTGGTTTTATTTTCGCATACAAACAGAATAATAGGTAGCAGAAGCTCCGTAAGGAGCAGCCTCGTTGATAGAGACTTGGGATTTCCAAGGTATGTTTCTTTGAAGGTTCCAAGTTCAAAACCTACGTGTGAACTTGATTATAAAATCTCTTGTTGTCTCTTGAGTTCAAATCTTTGAACGGGTAGGGGTGTTTCGGATATCTAGTGGGGTGGAACTTTGATTGACTTAGTAATCATAAAGGGTCAAAGGGATTTAAGTAACCAAGGGGTGATGAGTTCAAACTATAGGAACCGCTTACCTAGGAATTAATATCCTATAGTTTTCCTTTACATCCAAATGTTATAAGGTTTGGAGGTATGTCACGTGACAATAGTTGAGATGCTCACAAGCTGGCTCGGACAGTCACAGATATAAAAAAACACACACGCACAAAGAGAGATCAAGGATTTCAACAAAAATTCAAAGGATCTCCTTTATTATTATCGAACTAACATTTCGTTGTCAAATTAGAATCGCATCGGCAATTGACTTGCAATATAAAATATATTCATTCAATTATAGGTGAGCTCCATTGGAGTTACGGGTACCCGCACAACAGTAAGTGGTAGAGTGCAAACTCTTCTTGAGGAAATCAAAGAGGTACGTCTGCAGTCTGCTTACTAACTAATCTATGAGATGTACTTGCAGTAACTACCAATTTTGTCTTGCAAACAAAGTTATTTACTGTGAAATCTGATAGTGTTTGAAGAGGCTTTGATTTGAAACTGGTGAATAACATAGAGGTCTTGCAATCTGCTTTGCACGACAGGTTACGAAAAAGCCAGTTGCAGTTGGTTTTGGTATATCGAAACCCGAGCACGTTAAACAGGTACCAAACACTTCATCACAAGCCATAACATTGATTTTATTGTGAAATATACTGAATATGTGGCAGTCCCTAAGGGGTGGTGCAATGGTTGAGGACTTAGGTTTTGAGAGTATGCTCCCCTCAAGGTCCTGGGTCCGAGACTCATTTGTGACATTACGTTTTCGATGTCTCCGGTGCCTGGCCTAGAGATGGGCGTGGTTACCCTTATTTCAAAAAAAAAAAAAAAAAAACTGAATGTGTGGTGTGTTCATAGGTGGCTGACTGGGGGGCAGATGGCATTATTGTTGGTAGTGCTATGGTGAAGCTGTTGGGTGAAGCCCAGTCCCCTGAGGAAGGATTGAAGGAACTTGAAAACTTCACCAAATCCTTAAAATCTGCACTCTCTTGATGCAATAAACCAATGCAAACAAGTGCTCAACTTGCACTGTCATCTTAAAATCACCCAAATATTTTATTTCTCTTTTCACACAGAATAAAACTTTTAGGGTATTTTCAATCAATATAATGAGAATATTTTCTAGTATTTTCTTGGTAGCCAATGGATGGTTGCAAGTATAAATTTCTCAATAATTTACTGATTAGTCAATGCCCGTGATGTTTCCTTTATATTTTAG

mRNA sequence

AAATTCAGCCCATCAAAACGCCAATTTTCCGCCAACAACGCAACAGTGCCCGTTTTTGGCAACTGCAGCCGCTGTAAAGCCAGAACGAAATCGAGCTGCTATAAACCTCACATTCACTCTGTATTTGAATTCGAAGAAAACCCATTCGAGAATCTGCAGTTCCACCAAAACCCTCTTTGCGAAATGGACATTGCTTTCAAATCTTCGAGGGTTCTTCCCATCAACAAGATTCCCAATTCGCTCATCTTTTCTCCACGTCCTTGCAAGGTTTCAGTCTTCCAATCCAAGCGGTTTGCTCCAATGGCTGCCCTCACAGCCTCACCTGTTCTTGGACTGACTGAAACATTCGACAAATTGAGGGAGCAAGGCAAGGTTGCATTGATCCCCTACATTACTGCTGGTGATCCTGATCTTTCGACCACGGCTGAAGCATTGAAAGTGCTTTCCACATGTGGATCAGATATAATTGAACTTGGTGTTCCATATTCGGATCCCTTAGCAGATGGTCCTGTTATACAGGCGGCAGCTACTCGATCTTTGGCTAGAAAGACGAACTTTGATGCAATACTTTCTATGTTGAAGGGGGTGATTCCTGAACTATCATGTCCGGTTTCCCTGTTTACATATTATAACCCAATTCTTAAACGTGGCGTTGAAAACTTCATGATGACGATCGAAGATGCTGGTGTACGAGGGCTTGTGGTTCCAGATGTTCCTCTTGAGGAAACTGAAATTTTGAGAAAGGAAGCTGTAAAGCATAATATTGAACTGGTACTCTTAACTACACCAACCACGCCAAAAGATAGGATGAAGGACATCGTTGAAGCTTCAGAAGGATTTATATATCTTGTGAGCTCCATTGGAGTTACGGGTACCCGCACAACAGTAAGTGGTAGAGTGCAAACTCTTCTTGAGGAAATCAAAGAGGTTACGAAAAAGCCAGTTGCAGTTGGTTTTGGTATATCGAAACCCGAGCACGTTAAACAGGTGGCTGACTGGGGGGCAGATGGCATTATTGTTGGTAGTGCTATGGTGAAGCTGTTGGGTGAAGCCCAGTCCCCTGAGGAAGGATTGAAGGAACTTGAAAACTTCACCAAATCCTTAAAATCTGCACTCTCTTGATGCAATAAACCAATGCAAACAAGTGCTCAACTTGCACTGTCATCTTAAAATCACCCAAATATTTTATTTCTCTTTTCACACAGAATAAAACTTTTAGGGTATTTTCAATCAATATAATGAGAATATTTTCTAGTATTTTCTTGGTAGCCAATGGATGGTTGCAAGTATAAATTTCTCAATAATTTACTGATTAGTCAATGCCCGTGATGTTTCCTTTATATTTTAG

Coding sequence (CDS)

ATGGACATTGCTTTCAAATCTTCGAGGGTTCTTCCCATCAACAAGATTCCCAATTCGCTCATCTTTTCTCCACGTCCTTGCAAGGTTTCAGTCTTCCAATCCAAGCGGTTTGCTCCAATGGCTGCCCTCACAGCCTCACCTGTTCTTGGACTGACTGAAACATTCGACAAATTGAGGGAGCAAGGCAAGGTTGCATTGATCCCCTACATTACTGCTGGTGATCCTGATCTTTCGACCACGGCTGAAGCATTGAAAGTGCTTTCCACATGTGGATCAGATATAATTGAACTTGGTGTTCCATATTCGGATCCCTTAGCAGATGGTCCTGTTATACAGGCGGCAGCTACTCGATCTTTGGCTAGAAAGACGAACTTTGATGCAATACTTTCTATGTTGAAGGGGGTGATTCCTGAACTATCATGTCCGGTTTCCCTGTTTACATATTATAACCCAATTCTTAAACGTGGCGTTGAAAACTTCATGATGACGATCGAAGATGCTGGTGTACGAGGGCTTGTGGTTCCAGATGTTCCTCTTGAGGAAACTGAAATTTTGAGAAAGGAAGCTGTAAAGCATAATATTGAACTGGTACTCTTAACTACACCAACCACGCCAAAAGATAGGATGAAGGACATCGTTGAAGCTTCAGAAGGATTTATATATCTTGTGAGCTCCATTGGAGTTACGGGTACCCGCACAACAGTAAGTGGTAGAGTGCAAACTCTTCTTGAGGAAATCAAAGAGGTTACGAAAAAGCCAGTTGCAGTTGGTTTTGGTATATCGAAACCCGAGCACGTTAAACAGGTGGCTGACTGGGGGGCAGATGGCATTATTGTTGGTAGTGCTATGGTGAAGCTGTTGGGTGAAGCCCAGTCCCCTGAGGAAGGATTGAAGGAACTTGAAAACTTCACCAAATCCTTAAAATCTGCACTCTCTTGA

Protein sequence

MDIAFKSSRVLPINKIPNSLIFSPRPCKVSVFQSKRFAPMAALTASPVLGLTETFDKLREQGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPLADGPVIQAAATRSLARKTNFDAILSMLKGVIPELSCPVSLFTYYNPILKRGVENFMMTIEDAGVRGLVVPDVPLEETEILRKEAVKHNIELVLLTTPTTPKDRMKDIVEASEGFIYLVSSIGVTGTRTTVSGRVQTLLEEIKEVTKKPVAVGFGISKPEHVKQVADWGADGIIVGSAMVKLLGEAQSPEEGLKELENFTKSLKSALS

Homology

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BLAST of Sed0026472 vs. NCBI nr
Match: XP_008465320.1 (PREDICTED: tryptophan synthase alpha chain-like isoform X1 [Cucumis melo] >KAA0051282.1 tryptophan synthase alpha chain-like isoform X1 [Cucumis melo var. makuwa] >TYK29979.1 tryptophan synthase alpha chain-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 564.7 bits (1454), Expect = 5.0e-157
Identity = 284/312 (91.03%), Postives = 304/312 (97.44%), Query Frame = 0


Query: 1   MDIAFKSSRVLPINKIPNSLIFSPRPCKVSVFQSKRFAPMAALTASPVLGLTETFDKLRE 60
           MDIAFK SR+LP+NKIPN+LIFSPRPCK+SV Q+KRFAPMAAL A PV+GL+ETF KLRE
Sbjct: 1   MDIAFKPSRILPLNKIPNTLIFSPRPCKISVSQTKRFAPMAALAAYPVVGLSETFKKLRE 60

Query: 61  QGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPLADGPVIQAAATRSLA 120
           QGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPLADGPVIQAAATRSLA
Sbjct: 61  QGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPLADGPVIQAAATRSLA 120

Query: 121 RKTNFDAILSMLKGVIPELSCPVSLFTYYNPILKRGVENFMMTIEDAGVRGLVVPDVPLE 180
           R+TNF+AI+SMLKGVIPELSCP+SLFTYYNPILKRGVENFMM I+D GVRGLVVPDVPLE
Sbjct: 121 RETNFNAIISMLKGVIPELSCPISLFTYYNPILKRGVENFMMIIKDTGVRGLVVPDVPLE 180

Query: 181 ETEILRKEAVKHNIELVLLTTPTTPKDRMKDIVEASEGFIYLVSSIGVTGTRTTVSGRVQ 240
           ETE+LRKEAVKHNIELVLLTTPTTPK+RMK IVEASEGF+YLVSSIGVTGTRT+VSGRVQ
Sbjct: 181 ETEVLRKEAVKHNIELVLLTTPTTPKERMKKIVEASEGFVYLVSSIGVTGTRTSVSGRVQ 240

Query: 241 TLLEEIKEVTKKPVAVGFGISKPEHVKQVADWGADGIIVGSAMVKLLGEAQSPEEGLKEL 300
           TLLEE+KEVT+KPVAVGFGISKPEHVKQVA+WGADGII+GSAMVKLLGEAQSPEEGLKEL
Sbjct: 241 TLLEEVKEVTEKPVAVGFGISKPEHVKQVAEWGADGIIIGSAMVKLLGEAQSPEEGLKEL 300

Query: 301 ENFTKSLKSALS 313
           ENFTKSLKSALS
Sbjct: 301 ENFTKSLKSALS 312

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BLAST of Sed0026472 vs. NCBI nr
Match: XP_004141207.1 (tryptophan synthase alpha chain [Cucumis sativus] >KGN59758.1 hypothetical protein Csa_002167 [Cucumis sativus])

HSP 1 Score: 556.2 bits (1432), Expect = 1.8e-154
Identity = 281/312 (90.06%), Postives = 302/312 (96.79%), Query Frame = 0


Query: 1   MDIAFKSSRVLPINKIPNSLIFSPRPCKVSVFQSKRFAPMAALTASPVLGLTETFDKLRE 60
           MDIAFKSSR+LP+NKIPN+LIFSPRPCK+SV QSKRFAPMAAL A PV+GL+ETF  LRE
Sbjct: 1   MDIAFKSSRILPLNKIPNTLIFSPRPCKISVSQSKRFAPMAALAAYPVVGLSETFKNLRE 60

Query: 61  QGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPLADGPVIQAAATRSLA 120
           QGKVALIPYITAGDPDLSTTAEALKVLS CGSDIIELGVPYSDPLADGPVIQAAATRSLA
Sbjct: 61  QGKVALIPYITAGDPDLSTTAEALKVLSKCGSDIIELGVPYSDPLADGPVIQAAATRSLA 120

Query: 121 RKTNFDAILSMLKGVIPELSCPVSLFTYYNPILKRGVENFMMTIEDAGVRGLVVPDVPLE 180
           R+TNF+AI+SMLKGVIPELS P+SLFTYYNPILKRGVENFMM I+D GVRGLVVPDVPLE
Sbjct: 121 RETNFNAIISMLKGVIPELSRPISLFTYYNPILKRGVENFMMIIKDTGVRGLVVPDVPLE 180

Query: 181 ETEILRKEAVKHNIELVLLTTPTTPKDRMKDIVEASEGFIYLVSSIGVTGTRTTVSGRVQ 240
           ETE+LRKEAVKHNIELVLLTTPTTPK+RMK+IVEASEGF+YLVSSIGVTGTRT+VS RVQ
Sbjct: 181 ETEVLRKEAVKHNIELVLLTTPTTPKERMKNIVEASEGFVYLVSSIGVTGTRTSVSSRVQ 240

Query: 241 TLLEEIKEVTKKPVAVGFGISKPEHVKQVADWGADGIIVGSAMVKLLGEAQSPEEGLKEL 300
           TLLEE+KEVT+KPVAVGFGISKPEHVKQVA+WGADGII+GSAMVKLLGEAQSPEEGLKEL
Sbjct: 241 TLLEEVKEVTEKPVAVGFGISKPEHVKQVAEWGADGIIIGSAMVKLLGEAQSPEEGLKEL 300

Query: 301 ENFTKSLKSALS 313
           ENFT+SLKSALS
Sbjct: 301 ENFTRSLKSALS 312

[Close]

BLAST of Sed0026472 vs. NCBI nr
Match: XP_038906368.1 (tryptophan synthase alpha chain-like [Benincasa hispida])

HSP 1 Score: 555.1 bits (1429), Expect = 3.9e-154
Identity = 281/312 (90.06%), Postives = 301/312 (96.47%), Query Frame = 0


Query: 1   MDIAFKSSRVLPINKIPNSLIFSPRPCKVSVFQSKRFAPMAALTASPVLGLTETFDKLRE 60
           M IAFKSS   P+NKIP+S IFSPRPCK+SVF+SKRFAPMA L ASPV+GL+ETF+KLRE
Sbjct: 1   MAIAFKSSSFRPLNKIPSSPIFSPRPCKISVFKSKRFAPMATLAASPVVGLSETFNKLRE 60

Query: 61  QGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPLADGPVIQAAATRSLA 120
           QGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPLADGPVIQAAATRSLA
Sbjct: 61  QGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPLADGPVIQAAATRSLA 120

Query: 121 RKTNFDAILSMLKGVIPELSCPVSLFTYYNPILKRGVENFMMTIEDAGVRGLVVPDVPLE 180
           R+TNF+AI+SMLKGVIPELSCP+SLFTYYN ILKRG+ENF+M I+DAGVRGLVVPDVPLE
Sbjct: 121 RETNFNAIISMLKGVIPELSCPISLFTYYNLILKRGIENFVMIIKDAGVRGLVVPDVPLE 180

Query: 181 ETEILRKEAVKHNIELVLLTTPTTPKDRMKDIVEASEGFIYLVSSIGVTGTRTTVSGRVQ 240
           ETEILRKEAVK+NIELVLLTTPTTPKDRMKDI EASEGF+YLVSS+GVTGTRT+VSGRVQ
Sbjct: 181 ETEILRKEAVKYNIELVLLTTPTTPKDRMKDIAEASEGFVYLVSSVGVTGTRTSVSGRVQ 240

Query: 241 TLLEEIKEVTKKPVAVGFGISKPEHVKQVADWGADGIIVGSAMVKLLGEAQSPEEGLKEL 300
           TLLEE+KEVT KPVAVGFGISKPEHVKQVADWGADGII+GSAMVKLLGEAQSPEEGLKEL
Sbjct: 241 TLLEEVKEVTDKPVAVGFGISKPEHVKQVADWGADGIIIGSAMVKLLGEAQSPEEGLKEL 300

Query: 301 ENFTKSLKSALS 313
           ENFTKSLKSALS
Sbjct: 301 ENFTKSLKSALS 312

[Close]

BLAST of Sed0026472 vs. NCBI nr
Match: XP_016903364.1 (PREDICTED: tryptophan synthase alpha chain-like isoform X2 [Cucumis melo])

HSP 1 Score: 553.5 bits (1425), Expect = 1.1e-153
Identity = 281/312 (90.06%), Postives = 301/312 (96.47%), Query Frame = 0


Query: 1   MDIAFKSSRVLPINKIPNSLIFSPRPCKVSVFQSKRFAPMAALTASPVLGLTETFDKLRE 60
           MDIAFK SR+LP+NKIPN+LIFSPRPCK+SV Q+KRFAPMAAL A PV+GL+ETF KLRE
Sbjct: 1   MDIAFKPSRILPLNKIPNTLIFSPRPCKISVSQTKRFAPMAALAAYPVVGLSETFKKLRE 60

Query: 61  QGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPLADGPVIQAAATRSLA 120
           QGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPLADGPVIQAAATRSLA
Sbjct: 61  QGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPLADGPVIQAAATRSLA 120

Query: 121 RKTNFDAILSMLKGVIPELSCPVSLFTYYNPILKRGVENFMMTIEDAGVRGLVVPDVPLE 180
           R+TNF+AI+SMLKGVIPELSCP+SLFTYYNPILKRGVENFMM I+D    GLVVPDVPLE
Sbjct: 121 RETNFNAIISMLKGVIPELSCPISLFTYYNPILKRGVENFMMIIKDT---GLVVPDVPLE 180

Query: 181 ETEILRKEAVKHNIELVLLTTPTTPKDRMKDIVEASEGFIYLVSSIGVTGTRTTVSGRVQ 240
           ETE+LRKEAVKHNIELVLLTTPTTPK+RMK IVEASEGF+YLVSSIGVTGTRT+VSGRVQ
Sbjct: 181 ETEVLRKEAVKHNIELVLLTTPTTPKERMKKIVEASEGFVYLVSSIGVTGTRTSVSGRVQ 240

Query: 241 TLLEEIKEVTKKPVAVGFGISKPEHVKQVADWGADGIIVGSAMVKLLGEAQSPEEGLKEL 300
           TLLEE+KEVT+KPVAVGFGISKPEHVKQVA+WGADGII+GSAMVKLLGEAQSPEEGLKEL
Sbjct: 241 TLLEEVKEVTEKPVAVGFGISKPEHVKQVAEWGADGIIIGSAMVKLLGEAQSPEEGLKEL 300

Query: 301 ENFTKSLKSALS 313
           ENFTKSLKSALS
Sbjct: 301 ENFTKSLKSALS 309

[Close]

BLAST of Sed0026472 vs. NCBI nr
Match: XP_022932801.1 (tryptophan synthase alpha chain-like [Cucurbita moschata])

HSP 1 Score: 549.7 bits (1415), Expect = 1.7e-152
Identity = 277/312 (88.78%), Postives = 300/312 (96.15%), Query Frame = 0


Query: 1   MDIAFKSSRVLPINKIPNSLIFSPRPCKVSVFQSKRFAPMAALTASPVLGLTETFDKLRE 60
           MDIAFKSSR LP+NKIP + I SPRPC +SVFQSKRFAP+AALTASP  GL+ETF+KLRE
Sbjct: 1   MDIAFKSSRFLPLNKIPTTRIVSPRPCTISVFQSKRFAPIAALTASPAAGLSETFNKLRE 60

Query: 61  QGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPLADGPVIQAAATRSLA 120
           QGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPLADGPVIQAAATR+LA
Sbjct: 61  QGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPLADGPVIQAAATRALA 120

Query: 121 RKTNFDAILSMLKGVIPELSCPVSLFTYYNPILKRGVENFMMTIEDAGVRGLVVPDVPLE 180
           R+TNF+AI+SMLKGVIPELSCPVSLF+YYNPILKRG+ENFMMTI DAGVRGLVVPDVPLE
Sbjct: 121 RETNFNAIISMLKGVIPELSCPVSLFSYYNPILKRGIENFMMTIRDAGVRGLVVPDVPLE 180

Query: 181 ETEILRKEAVKHNIELVLLTTPTTPKDRMKDIVEASEGFIYLVSSIGVTGTRTTVSGRVQ 240
           ET +LR+EAVK+NIELVLLTTPTTPKDRMK+IVEASEGF+YLVSS+GVTG RT+VSGRVQ
Sbjct: 181 ETAVLREEAVKYNIELVLLTTPTTPKDRMKNIVEASEGFVYLVSSVGVTGARTSVSGRVQ 240

Query: 241 TLLEEIKEVTKKPVAVGFGISKPEHVKQVADWGADGIIVGSAMVKLLGEAQSPEEGLKEL 300
           +LLEEIKEVT+KPVAVGFGISKPEHVKQVA WGADG+IVGSAMVKLLGEAQSPEEGLKEL
Sbjct: 241 SLLEEIKEVTEKPVAVGFGISKPEHVKQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKEL 300

Query: 301 ENFTKSLKSALS 313
           E FTKSL+SALS
Sbjct: 301 ETFTKSLRSALS 312

[Close]

BLAST of Sed0026472 vs. ExPASy Swiss-Prot
Match: Q42529 (Tryptophan synthase alpha chain, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TSA1 PE=1 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 6.6e-120
Identity = 227/312 (72.76%), Postives = 260/312 (83.33%), Query Frame = 0


Query: 1   MDIAFKSSRVLPINKIPNSLIFSPRPCKVSVFQSKRFAPMAAL-TASPVLGLTETFDKLR 60
           M IAFKS  V  +    + + F       S    KRF PMA+L T+SP LGL +TF +L+
Sbjct: 1   MAIAFKSG-VFFLQSPKSQIGFRHSSPPDSSLSFKRFTPMASLSTSSPTLGLADTFTQLK 60

Query: 61  EQGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPLADGPVIQAAATRSL 120
           +QGKVA IPYITAGDPDLSTTAEALKVL  CGSDIIELGVPYSDPLADGPVIQAAATRSL
Sbjct: 61  KQGKVAFIPYITAGDPDLSTTAEALKVLDACGSDIIELGVPYSDPLADGPVIQAAATRSL 120

Query: 121 ARKTNFDAILSMLKGVIPELSCPVSLFTYYNPILKRGVENFMMTIEDAGVRGLVVPDVPL 180
            R TN D+IL ML  V+P++SCP+SLFTYYNPILKRG+  FM +I   GV+GLVVPDVPL
Sbjct: 121 ERGTNLDSILEMLDKVVPQISCPISLFTYYNPILKRGLGKFMSSIRAVGVQGLVVPDVPL 180

Query: 181 EETEILRKEAVKHNIELVLLTTPTTPKDRMKDIVEASEGFIYLVSSIGVTGTRTTVSGRV 240
           EETE+LRKEA+ ++IELVLLTTPTTP +RMK IV+ASEGFIYLVSSIGVTG R++VSG+V
Sbjct: 181 EETEMLRKEALNNDIELVLLTTPTTPTERMKLIVDASEGFIYLVSSIGVTGARSSVSGKV 240

Query: 241 QTLLEEIKEVTKKPVAVGFGISKPEHVKQVADWGADGIIVGSAMVKLLGEAQSPEEGLKE 300
           Q+LL++IKE T KPVAVGFGISKPEHVKQ+A WGADG+IVGSAMVKLLG+A+SP EGLKE
Sbjct: 241 QSLLKDIKEATDKPVAVGFGISKPEHVKQIAGWGADGVIVGSAMVKLLGDAKSPTEGLKE 300

Query: 301 LENFTKSLKSAL 312
           LE  TKSLKSAL
Sbjct: 301 LEKLTKSLKSAL 311

[Close]

BLAST of Sed0026472 vs. ExPASy Swiss-Prot
Match: O22765 (Tryptophan synthase alpha chain OS=Arabidopsis thaliana OX=3702 GN=TRPA1 PE=1 SV=2)

HSP 1 Score: 423.7 bits (1088), Expect = 1.8e-117
Identity = 211/268 (78.73%), Postives = 243/268 (90.67%), Query Frame = 0


Query: 44  TASPVLGLTETFDKLREQGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSD 103
           T S  +GL+ETF +L+ QGKVALIPYITAGDPDLSTTA+ALKVL +CGSDIIELGVPYSD
Sbjct: 6   TPSSTVGLSETFARLKSQGKVALIPYITAGDPDLSTTAKALKVLDSCGSDIIELGVPYSD 65

Query: 104 PLADGPVIQAAATRSLARKTNFDAILSMLKGVIPELSCPVSLFTYYNPILKRGVENFMMT 163
           PLADGP IQAAA RSL + TNF++I+SMLK VIP+LSCP++LFTYYNPIL+RGVEN+M  
Sbjct: 66  PLADGPAIQAAARRSLLKGTNFNSIISMLKEVIPQLSCPIALFTYYNPILRRGVENYMTV 125

Query: 164 IEDAGVRGLVVPDVPLEETEILRKEAVKHNIELVLLTTPTTPKDRMKDIVEASEGFIYLV 223
           I++AGV GL+VPDVPLEETE LR EA KH IELVLLTTPTTPK+RM  IVEASEGFIYLV
Sbjct: 126 IKNAGVHGLLVPDVPLEETETLRNEARKHQIELVLLTTPTTPKERMNAIVEASEGFIYLV 185

Query: 224 SSIGVTGTRTTVSGRVQTLLEEIKEVTKKPVAVGFGISKPEHVKQVADWGADGIIVGSAM 283
           SS+GVTGTR +V+ +VQ+LL++IKE T KPVAVGFGISKPEHVKQVA+WGADG+IVGSAM
Sbjct: 186 SSVGVTGTRESVNEKVQSLLQQIKEATSKPVAVGFGISKPEHVKQVAEWGADGVIVGSAM 245

Query: 284 VKLLGEAQSPEEGLKELENFTKSLKSAL 312
           VK+LGE++SPE+GLKELE FTKSLKSAL
Sbjct: 246 VKILGESESPEQGLKELEFFTKSLKSAL 273

[Close]

BLAST of Sed0026472 vs. ExPASy Swiss-Prot
Match: P42390 (Indole-3-glycerol phosphate lyase, chloroplastic OS=Zea mays OX=4577 GN=BX1 PE=1 SV=2)

HSP 1 Score: 318.9 bits (816), Expect = 6.2e-86
Identity = 163/289 (56.40%), Postives = 211/289 (73.01%), Query Frame = 0


Query: 23  SPRPCKVSVFQSKRFAPMAALTASPVLGLTETFDKLREQGKVALIPYITAGDPDLSTTAE 82
           +P P  V     K+ A  A   + PV   ++T   L  +GK A IPYITAGDPDL+TTAE
Sbjct: 68  APAPAPV---PPKQAAAPAERRSRPV---SDTMAALMAKGKTAFIPYITAGDPDLATTAE 127

Query: 83  ALKVLSTCGSDIIELGVPYSDPLADGPVIQAAATRSLARKTNFDAILSMLKGVIPELSCP 142
           AL++L  CG+D+IELGVP SDP  DGP+IQA+  R+LA  T  DA+L ML+ V PELSCP
Sbjct: 128 ALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPELSCP 187

Query: 143 VSLFTYYNPILKRGVENFMMTIEDAGVRGLVVPDVPLEETEILRKEAVKHNIELVLLTTP 202
           V L +YY PI+ R     +  +++AGV GL+VPD+P      L  EA  +N+ELVLLTTP
Sbjct: 188 VVLLSYYKPIMSRS----LAEMKEAGVHGLIVPDLPYVAAHSLWSEAKNNNLELVLLTTP 247

Query: 203 TTPKDRMKDIVEASEGFIYLVSSIGVTGTRTTVSGRVQTLLEEIKEVTKKPVAVGFGISK 262
             P+DRMK+I +ASEGF+YLVS  GVTG R  V+ RV++L++E+K+VT KPVAVGFGISK
Sbjct: 248 AIPEDRMKEITKASEGFVYLVSVNGVTGPRANVNPRVESLIQEVKKVTNKPVAVGFGISK 307

Query: 263 PEHVKQVADWGADGIIVGSAMVKLLGEAQSPEEGLKELENFTKSLKSAL 312
           PEHVKQ+A WGADG+I+GSAMV+ LGEA SP++GL+ LE + + +K+AL
Sbjct: 308 PEHVKQIAQWGADGVIIGSAMVRQLGEAASPKQGLRRLEEYARGMKNAL 346

[Close]

BLAST of Sed0026472 vs. ExPASy Swiss-Prot
Match: B8HPH2 (Tryptophan synthase alpha chain OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) OX=395961 GN=trpA PE=3 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 3.9e-80
Identity = 151/265 (56.98%), Postives = 194/265 (73.21%), Query Frame = 0


Query: 48  VLGLTETFDKLREQGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPLAD 107
           ++ ++  F  LR++ + ALIP+ITAGDP L  TA+AL+VL   G+D+IELGVPYSDPLAD
Sbjct: 1   MVSVSTCFSALRDRAQCALIPFITAGDPSLEITAKALQVLDQQGADLIELGVPYSDPLAD 60

Query: 108 GPVIQAAATRSLARKTNFDAILSMLKGVIPELSCPVSLFTYYNPILKRGVENFMMTIEDA 167
           GP IQAAATR+L + T  DA+L M+  V P L  P+ LFTYYNPI  RGVE F+  +  A
Sbjct: 61  GPTIQAAATRALQKGTRLDAVLEMISHVAPNLRSPLILFTYYNPIFHRGVEPFLQQVAQA 120

Query: 168 GVRGLVVPDVPLEETEILRKEAVKHNIELVLLTTPTTPKDRMKDIVEASEGFIYLVSSIG 227
           GV+GLVVPD+PLEE + +  +A    IEL LL  PTTP+ R+  I E S+GFIYLVS+ G
Sbjct: 121 GVQGLVVPDLPLEEADTVLTQAAAVGIELTLLVAPTTPRSRIAAIAERSQGFIYLVSTTG 180

Query: 228 VTGTRTTVSGRVQTLLEEIKEVTKKPVAVGFGISKPEHVKQVADWGADGIIVGSAMVKLL 287
           VTG R+ V GRV  LL E+++VT KP+ VGFGIS+PEH +QV +WGAD  IVGSA VK L
Sbjct: 181 VTGMRSKVEGRVHELLLELQQVTDKPIGVGFGISQPEHARQVMEWGADAAIVGSAFVKRL 240

Query: 288 GEAQSPEEGLKELENFTKSLKSALS 313
            E  +PE+GL  + +F +SLK+AL+
Sbjct: 241 AEG-TPEQGLAAIADFCRSLKTALT 264

[Close]

BLAST of Sed0026472 vs. ExPASy Swiss-Prot
Match: B0C6F8 (Tryptophan synthase alpha chain OS=Acaryochloris marina (strain MBIC 11017) OX=329726 GN=trpA PE=3 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 5.1e-80
Identity = 150/261 (57.47%), Postives = 193/261 (73.95%), Query Frame = 0


Query: 51  LTETFDKLREQGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPLADGPV 110
           +++ F +LR++G+ ALIP++TAGDPDL+TTA AL+ L   G+D+IELGVPYSDPLADGPV
Sbjct: 4   VSDCFAQLRDRGQCALIPFLTAGDPDLATTASALRQLDASGADLIELGVPYSDPLADGPV 63

Query: 111 IQAAATRSLARKTNFDAILSMLKGVIPELSCPVSLFTYYNPILKRGVENFMMTIEDAGVR 170
           IQAAATR+L R T  D +L M+  + PE+  P+ LFTYYNPI  RGV  F+  I  AGVR
Sbjct: 64  IQAAATRALQRGTRLDQVLEMVTELSPEIRAPIILFTYYNPIYHRGVAEFLQQIAKAGVR 123

Query: 171 GLVVPDVPLEETEILRKEAVKHNIELVLLTTPTTPKDRMKDIVEASEGFIYLVSSIGVTG 230
           GLVVPD+PLEE+E L ++A    IE+ LL  PT+ K+R++ I   S+GFIYLVS+ GVTG
Sbjct: 124 GLVVPDLPLEESENLLQQAADLGIEVTLLVAPTSSKERIEKIALRSQGFIYLVSTTGVTG 183

Query: 231 TRTTVSGRVQTLLEEIKEVTKKPVAVGFGISKPEHVKQVADWGADGIIVGSAMVKLLGEA 290
            RT V  RVQ L+ ++++VT KP+ VGFGIS+ EH +QV DWGAD  IVGSA V  L E 
Sbjct: 184 MRTKVENRVQDLIADLRQVTDKPIGVGFGISRTEHARQVMDWGADAAIVGSAFVNRLSEG 243

Query: 291 QSPEEGLKELENFTKSLKSAL 312
            SP +GL  +  F +SLKS+L
Sbjct: 244 -SPSQGLSAISTFCRSLKSSL 263

[Close]

BLAST of Sed0026472 vs. ExPASy TrEMBL
Match: A0A5D3E2H9 (Tryptophan synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold734G00080 PE=3 SV=1)

HSP 1 Score: 564.7 bits (1454), Expect = 2.4e-157
Identity = 284/312 (91.03%), Postives = 304/312 (97.44%), Query Frame = 0


Query: 1   MDIAFKSSRVLPINKIPNSLIFSPRPCKVSVFQSKRFAPMAALTASPVLGLTETFDKLRE 60
           MDIAFK SR+LP+NKIPN+LIFSPRPCK+SV Q+KRFAPMAAL A PV+GL+ETF KLRE
Sbjct: 1   MDIAFKPSRILPLNKIPNTLIFSPRPCKISVSQTKRFAPMAALAAYPVVGLSETFKKLRE 60

Query: 61  QGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPLADGPVIQAAATRSLA 120
           QGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPLADGPVIQAAATRSLA
Sbjct: 61  QGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPLADGPVIQAAATRSLA 120

Query: 121 RKTNFDAILSMLKGVIPELSCPVSLFTYYNPILKRGVENFMMTIEDAGVRGLVVPDVPLE 180
           R+TNF+AI+SMLKGVIPELSCP+SLFTYYNPILKRGVENFMM I+D GVRGLVVPDVPLE
Sbjct: 121 RETNFNAIISMLKGVIPELSCPISLFTYYNPILKRGVENFMMIIKDTGVRGLVVPDVPLE 180

Query: 181 ETEILRKEAVKHNIELVLLTTPTTPKDRMKDIVEASEGFIYLVSSIGVTGTRTTVSGRVQ 240
           ETE+LRKEAVKHNIELVLLTTPTTPK+RMK IVEASEGF+YLVSSIGVTGTRT+VSGRVQ
Sbjct: 181 ETEVLRKEAVKHNIELVLLTTPTTPKERMKKIVEASEGFVYLVSSIGVTGTRTSVSGRVQ 240

Query: 241 TLLEEIKEVTKKPVAVGFGISKPEHVKQVADWGADGIIVGSAMVKLLGEAQSPEEGLKEL 300
           TLLEE+KEVT+KPVAVGFGISKPEHVKQVA+WGADGII+GSAMVKLLGEAQSPEEGLKEL
Sbjct: 241 TLLEEVKEVTEKPVAVGFGISKPEHVKQVAEWGADGIIIGSAMVKLLGEAQSPEEGLKEL 300

Query: 301 ENFTKSLKSALS 313
           ENFTKSLKSALS
Sbjct: 301 ENFTKSLKSALS 312

[Close]

BLAST of Sed0026472 vs. ExPASy TrEMBL
Match: A0A1S3CNL8 (Tryptophan synthase OS=Cucumis melo OX=3656 GN=LOC103502969 PE=3 SV=1)

HSP 1 Score: 564.7 bits (1454), Expect = 2.4e-157
Identity = 284/312 (91.03%), Postives = 304/312 (97.44%), Query Frame = 0


Query: 1   MDIAFKSSRVLPINKIPNSLIFSPRPCKVSVFQSKRFAPMAALTASPVLGLTETFDKLRE 60
           MDIAFK SR+LP+NKIPN+LIFSPRPCK+SV Q+KRFAPMAAL A PV+GL+ETF KLRE
Sbjct: 1   MDIAFKPSRILPLNKIPNTLIFSPRPCKISVSQTKRFAPMAALAAYPVVGLSETFKKLRE 60

Query: 61  QGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPLADGPVIQAAATRSLA 120
           QGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPLADGPVIQAAATRSLA
Sbjct: 61  QGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPLADGPVIQAAATRSLA 120

Query: 121 RKTNFDAILSMLKGVIPELSCPVSLFTYYNPILKRGVENFMMTIEDAGVRGLVVPDVPLE 180
           R+TNF+AI+SMLKGVIPELSCP+SLFTYYNPILKRGVENFMM I+D GVRGLVVPDVPLE
Sbjct: 121 RETNFNAIISMLKGVIPELSCPISLFTYYNPILKRGVENFMMIIKDTGVRGLVVPDVPLE 180

Query: 181 ETEILRKEAVKHNIELVLLTTPTTPKDRMKDIVEASEGFIYLVSSIGVTGTRTTVSGRVQ 240
           ETE+LRKEAVKHNIELVLLTTPTTPK+RMK IVEASEGF+YLVSSIGVTGTRT+VSGRVQ
Sbjct: 181 ETEVLRKEAVKHNIELVLLTTPTTPKERMKKIVEASEGFVYLVSSIGVTGTRTSVSGRVQ 240

Query: 241 TLLEEIKEVTKKPVAVGFGISKPEHVKQVADWGADGIIVGSAMVKLLGEAQSPEEGLKEL 300
           TLLEE+KEVT+KPVAVGFGISKPEHVKQVA+WGADGII+GSAMVKLLGEAQSPEEGLKEL
Sbjct: 241 TLLEEVKEVTEKPVAVGFGISKPEHVKQVAEWGADGIIIGSAMVKLLGEAQSPEEGLKEL 300

Query: 301 ENFTKSLKSALS 313
           ENFTKSLKSALS
Sbjct: 301 ENFTKSLKSALS 312

[Close]

BLAST of Sed0026472 vs. ExPASy TrEMBL
Match: A0A0A0LD81 (Tryptophan synthase OS=Cucumis sativus OX=3659 GN=Csa_3G843770 PE=3 SV=1)

HSP 1 Score: 556.2 bits (1432), Expect = 8.6e-155
Identity = 281/312 (90.06%), Postives = 302/312 (96.79%), Query Frame = 0


Query: 1   MDIAFKSSRVLPINKIPNSLIFSPRPCKVSVFQSKRFAPMAALTASPVLGLTETFDKLRE 60
           MDIAFKSSR+LP+NKIPN+LIFSPRPCK+SV QSKRFAPMAAL A PV+GL+ETF  LRE
Sbjct: 1   MDIAFKSSRILPLNKIPNTLIFSPRPCKISVSQSKRFAPMAALAAYPVVGLSETFKNLRE 60

Query: 61  QGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPLADGPVIQAAATRSLA 120
           QGKVALIPYITAGDPDLSTTAEALKVLS CGSDIIELGVPYSDPLADGPVIQAAATRSLA
Sbjct: 61  QGKVALIPYITAGDPDLSTTAEALKVLSKCGSDIIELGVPYSDPLADGPVIQAAATRSLA 120

Query: 121 RKTNFDAILSMLKGVIPELSCPVSLFTYYNPILKRGVENFMMTIEDAGVRGLVVPDVPLE 180
           R+TNF+AI+SMLKGVIPELS P+SLFTYYNPILKRGVENFMM I+D GVRGLVVPDVPLE
Sbjct: 121 RETNFNAIISMLKGVIPELSRPISLFTYYNPILKRGVENFMMIIKDTGVRGLVVPDVPLE 180

Query: 181 ETEILRKEAVKHNIELVLLTTPTTPKDRMKDIVEASEGFIYLVSSIGVTGTRTTVSGRVQ 240
           ETE+LRKEAVKHNIELVLLTTPTTPK+RMK+IVEASEGF+YLVSSIGVTGTRT+VS RVQ
Sbjct: 181 ETEVLRKEAVKHNIELVLLTTPTTPKERMKNIVEASEGFVYLVSSIGVTGTRTSVSSRVQ 240

Query: 241 TLLEEIKEVTKKPVAVGFGISKPEHVKQVADWGADGIIVGSAMVKLLGEAQSPEEGLKEL 300
           TLLEE+KEVT+KPVAVGFGISKPEHVKQVA+WGADGII+GSAMVKLLGEAQSPEEGLKEL
Sbjct: 241 TLLEEVKEVTEKPVAVGFGISKPEHVKQVAEWGADGIIIGSAMVKLLGEAQSPEEGLKEL 300

Query: 301 ENFTKSLKSALS 313
           ENFT+SLKSALS
Sbjct: 301 ENFTRSLKSALS 312

[Close]

BLAST of Sed0026472 vs. ExPASy TrEMBL
Match: A0A1S4E560 (Tryptophan synthase OS=Cucumis melo OX=3656 GN=LOC103502969 PE=3 SV=1)

HSP 1 Score: 553.5 bits (1425), Expect = 5.6e-154
Identity = 281/312 (90.06%), Postives = 301/312 (96.47%), Query Frame = 0


Query: 1   MDIAFKSSRVLPINKIPNSLIFSPRPCKVSVFQSKRFAPMAALTASPVLGLTETFDKLRE 60
           MDIAFK SR+LP+NKIPN+LIFSPRPCK+SV Q+KRFAPMAAL A PV+GL+ETF KLRE
Sbjct: 1   MDIAFKPSRILPLNKIPNTLIFSPRPCKISVSQTKRFAPMAALAAYPVVGLSETFKKLRE 60

Query: 61  QGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPLADGPVIQAAATRSLA 120
           QGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPLADGPVIQAAATRSLA
Sbjct: 61  QGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPLADGPVIQAAATRSLA 120

Query: 121 RKTNFDAILSMLKGVIPELSCPVSLFTYYNPILKRGVENFMMTIEDAGVRGLVVPDVPLE 180
           R+TNF+AI+SMLKGVIPELSCP+SLFTYYNPILKRGVENFMM I+D    GLVVPDVPLE
Sbjct: 121 RETNFNAIISMLKGVIPELSCPISLFTYYNPILKRGVENFMMIIKDT---GLVVPDVPLE 180

Query: 181 ETEILRKEAVKHNIELVLLTTPTTPKDRMKDIVEASEGFIYLVSSIGVTGTRTTVSGRVQ 240
           ETE+LRKEAVKHNIELVLLTTPTTPK+RMK IVEASEGF+YLVSSIGVTGTRT+VSGRVQ
Sbjct: 181 ETEVLRKEAVKHNIELVLLTTPTTPKERMKKIVEASEGFVYLVSSIGVTGTRTSVSGRVQ 240

Query: 241 TLLEEIKEVTKKPVAVGFGISKPEHVKQVADWGADGIIVGSAMVKLLGEAQSPEEGLKEL 300
           TLLEE+KEVT+KPVAVGFGISKPEHVKQVA+WGADGII+GSAMVKLLGEAQSPEEGLKEL
Sbjct: 241 TLLEEVKEVTEKPVAVGFGISKPEHVKQVAEWGADGIIIGSAMVKLLGEAQSPEEGLKEL 300

Query: 301 ENFTKSLKSALS 313
           ENFTKSLKSALS
Sbjct: 301 ENFTKSLKSALS 309

[Close]

BLAST of Sed0026472 vs. ExPASy TrEMBL
Match: A0A6J1EXE2 (Tryptophan synthase OS=Cucurbita moschata OX=3662 GN=LOC111439260 PE=3 SV=1)

HSP 1 Score: 549.7 bits (1415), Expect = 8.0e-153
Identity = 277/312 (88.78%), Postives = 300/312 (96.15%), Query Frame = 0


Query: 1   MDIAFKSSRVLPINKIPNSLIFSPRPCKVSVFQSKRFAPMAALTASPVLGLTETFDKLRE 60
           MDIAFKSSR LP+NKIP + I SPRPC +SVFQSKRFAP+AALTASP  GL+ETF+KLRE
Sbjct: 1   MDIAFKSSRFLPLNKIPTTRIVSPRPCTISVFQSKRFAPIAALTASPAAGLSETFNKLRE 60

Query: 61  QGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPLADGPVIQAAATRSLA 120
           QGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPLADGPVIQAAATR+LA
Sbjct: 61  QGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPLADGPVIQAAATRALA 120

Query: 121 RKTNFDAILSMLKGVIPELSCPVSLFTYYNPILKRGVENFMMTIEDAGVRGLVVPDVPLE 180
           R+TNF+AI+SMLKGVIPELSCPVSLF+YYNPILKRG+ENFMMTI DAGVRGLVVPDVPLE
Sbjct: 121 RETNFNAIISMLKGVIPELSCPVSLFSYYNPILKRGIENFMMTIRDAGVRGLVVPDVPLE 180

Query: 181 ETEILRKEAVKHNIELVLLTTPTTPKDRMKDIVEASEGFIYLVSSIGVTGTRTTVSGRVQ 240
           ET +LR+EAVK+NIELVLLTTPTTPKDRMK+IVEASEGF+YLVSS+GVTG RT+VSGRVQ
Sbjct: 181 ETAVLREEAVKYNIELVLLTTPTTPKDRMKNIVEASEGFVYLVSSVGVTGARTSVSGRVQ 240

Query: 241 TLLEEIKEVTKKPVAVGFGISKPEHVKQVADWGADGIIVGSAMVKLLGEAQSPEEGLKEL 300
           +LLEEIKEVT+KPVAVGFGISKPEHVKQVA WGADG+IVGSAMVKLLGEAQSPEEGLKEL
Sbjct: 241 SLLEEIKEVTEKPVAVGFGISKPEHVKQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKEL 300

Query: 301 ENFTKSLKSALS 313
           E FTKSL+SALS
Sbjct: 301 ETFTKSLRSALS 312

[Close]

BLAST of Sed0026472 vs. TAIR 10
Match: AT3G54640.1 (tryptophan synthase alpha chain )

HSP 1 Score: 431.8 bits (1109), Expect = 4.7e-121
Identity = 227/312 (72.76%), Postives = 260/312 (83.33%), Query Frame = 0


Query: 1   MDIAFKSSRVLPINKIPNSLIFSPRPCKVSVFQSKRFAPMAAL-TASPVLGLTETFDKLR 60
           M IAFKS  V  +    + + F       S    KRF PMA+L T+SP LGL +TF +L+
Sbjct: 1   MAIAFKSG-VFFLQSPKSQIGFRHSSPPDSSLSFKRFTPMASLSTSSPTLGLADTFTQLK 60

Query: 61  EQGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPLADGPVIQAAATRSL 120
           +QGKVA IPYITAGDPDLSTTAEALKVL  CGSDIIELGVPYSDPLADGPVIQAAATRSL
Sbjct: 61  KQGKVAFIPYITAGDPDLSTTAEALKVLDACGSDIIELGVPYSDPLADGPVIQAAATRSL 120

Query: 121 ARKTNFDAILSMLKGVIPELSCPVSLFTYYNPILKRGVENFMMTIEDAGVRGLVVPDVPL 180
            R TN D+IL ML  V+P++SCP+SLFTYYNPILKRG+  FM +I   GV+GLVVPDVPL
Sbjct: 121 ERGTNLDSILEMLDKVVPQISCPISLFTYYNPILKRGLGKFMSSIRAVGVQGLVVPDVPL 180

Query: 181 EETEILRKEAVKHNIELVLLTTPTTPKDRMKDIVEASEGFIYLVSSIGVTGTRTTVSGRV 240
           EETE+LRKEA+ ++IELVLLTTPTTP +RMK IV+ASEGFIYLVSSIGVTG R++VSG+V
Sbjct: 181 EETEMLRKEALNNDIELVLLTTPTTPTERMKLIVDASEGFIYLVSSIGVTGARSSVSGKV 240

Query: 241 QTLLEEIKEVTKKPVAVGFGISKPEHVKQVADWGADGIIVGSAMVKLLGEAQSPEEGLKE 300
           Q+LL++IKE T KPVAVGFGISKPEHVKQ+A WGADG+IVGSAMVKLLG+A+SP EGLKE
Sbjct: 241 QSLLKDIKEATDKPVAVGFGISKPEHVKQIAGWGADGVIVGSAMVKLLGDAKSPTEGLKE 300

Query: 301 LENFTKSLKSAL 312
           LE  TKSLKSAL
Sbjct: 301 LEKLTKSLKSAL 311

[Close]

BLAST of Sed0026472 vs. TAIR 10
Match: AT4G02610.1 (Aldolase-type TIM barrel family protein )

HSP 1 Score: 423.7 bits (1088), Expect = 1.3e-118
Identity = 211/268 (78.73%), Postives = 243/268 (90.67%), Query Frame = 0


Query: 44  TASPVLGLTETFDKLREQGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSD 103
           T S  +GL+ETF +L+ QGKVALIPYITAGDPDLSTTA+ALKVL +CGSDIIELGVPYSD
Sbjct: 6   TPSSTVGLSETFARLKSQGKVALIPYITAGDPDLSTTAKALKVLDSCGSDIIELGVPYSD 65

Query: 104 PLADGPVIQAAATRSLARKTNFDAILSMLKGVIPELSCPVSLFTYYNPILKRGVENFMMT 163
           PLADGP IQAAA RSL + TNF++I+SMLK VIP+LSCP++LFTYYNPIL+RGVEN+M  
Sbjct: 66  PLADGPAIQAAARRSLLKGTNFNSIISMLKEVIPQLSCPIALFTYYNPILRRGVENYMTV 125

Query: 164 IEDAGVRGLVVPDVPLEETEILRKEAVKHNIELVLLTTPTTPKDRMKDIVEASEGFIYLV 223
           I++AGV GL+VPDVPLEETE LR EA KH IELVLLTTPTTPK+RM  IVEASEGFIYLV
Sbjct: 126 IKNAGVHGLLVPDVPLEETETLRNEARKHQIELVLLTTPTTPKERMNAIVEASEGFIYLV 185

Query: 224 SSIGVTGTRTTVSGRVQTLLEEIKEVTKKPVAVGFGISKPEHVKQVADWGADGIIVGSAM 283
           SS+GVTGTR +V+ +VQ+LL++IKE T KPVAVGFGISKPEHVKQVA+WGADG+IVGSAM
Sbjct: 186 SSVGVTGTRESVNEKVQSLLQQIKEATSKPVAVGFGISKPEHVKQVAEWGADGVIVGSAM 245

Query: 284 VKLLGEAQSPEEGLKELENFTKSLKSAL 312
           VK+LGE++SPE+GLKELE FTKSLKSAL
Sbjct: 246 VKILGESESPEQGLKELEFFTKSLKSAL 273

The following BLAST results are available for this feature:

BLAST of Sed0026472 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008465320.1	5.0e-157	91.03	PREDICTED: tryptophan synthase alpha chain-like isoform X1 [Cucumis melo] >KAA00...	[more]
XP_004141207.1	1.8e-154	90.06	tryptophan synthase alpha chain [Cucumis sativus] >KGN59758.1 hypothetical prote...	[more]
XP_038906368.1	3.9e-154	90.06	tryptophan synthase alpha chain-like [Benincasa hispida]	[more]
XP_016903364.1	1.1e-153	90.06	PREDICTED: tryptophan synthase alpha chain-like isoform X2 [Cucumis melo]	[more]
XP_022932801.1	1.7e-152	88.78	tryptophan synthase alpha chain-like [Cucurbita moschata]	[more]

BLAST of Sed0026472 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q42529	6.6e-120	72.76	Tryptophan synthase alpha chain, chloroplastic OS=Arabidopsis thaliana OX=3702 G...	[more]
O22765	1.8e-117	78.73	Tryptophan synthase alpha chain OS=Arabidopsis thaliana OX=3702 GN=TRPA1 PE=1 SV...	[more]
P42390	6.2e-86	56.40	Indole-3-glycerol phosphate lyase, chloroplastic OS=Zea mays OX=4577 GN=BX1 PE=1...	[more]
B8HPH2	3.9e-80	56.98	Tryptophan synthase alpha chain OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141)...	[more]
B0C6F8	5.1e-80	57.47	Tryptophan synthase alpha chain OS=Acaryochloris marina (strain MBIC 11017) OX=3...	[more]

BLAST of Sed0026472 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E2H9	2.4e-157	91.03	Tryptophan synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold734G...	[more]
A0A1S3CNL8	2.4e-157	91.03	Tryptophan synthase OS=Cucumis melo OX=3656 GN=LOC103502969 PE=3 SV=1	[more]
A0A0A0LD81	8.6e-155	90.06	Tryptophan synthase OS=Cucumis sativus OX=3659 GN=Csa_3G843770 PE=3 SV=1	[more]
A0A1S4E560	5.6e-154	90.06	Tryptophan synthase OS=Cucumis melo OX=3656 GN=LOC103502969 PE=3 SV=1	[more]
A0A6J1EXE2	8.0e-153	88.78	Tryptophan synthase OS=Cucurbita moschata OX=3662 GN=LOC111439260 PE=3 SV=1	[more]

BLAST of Sed0026472 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G54640.1	4.7e-121	72.76	tryptophan synthase alpha chain	[more]
AT4G02610.1	1.3e-118	78.73	Aldolase-type TIM barrel family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002028	Tryptophan synthase, alpha chain	PFAM	PF00290	Trp_syntA	coord: 3..250 e-value: 1.5E-92 score: 309.2
IPR002028	Tryptophan synthase, alpha chain	TIGRFAM	TIGR00262	TIGR00262	coord: 2..248 e-value: 2.8E-91 score: 302.9
IPR002028	Tryptophan synthase, alpha chain	PANTHER	PTHR43406	TRYPTOPHAN SYNTHASE, ALPHA CHAIN	coord: 3..251
IPR002028	Tryptophan synthase, alpha chain	HAMAP	MF_00131	Trp_synth_alpha	coord: 1..250 score: 36.15464
IPR002028	Tryptophan synthase, alpha chain	CDD	cd04724	Tryptophan_synthase_alpha	coord: 5..248 e-value: 9.24141E-117 score: 332.134
IPR013785	Aldolase-type TIM barrel	GENE3D	3.20.20.70	Aldolase class I	coord: 1..252 e-value: 1.3E-106 score: 357.3
None	No IPR available	PANTHER	PTHR43406:SF6	TRYPTOPHAN SYNTHASE ALPHA CHAIN	coord: 3..251
IPR018204	Tryptophan synthase, alpha chain, active site	PROSITE	PS00167	TRP_SYNTHASE_ALPHA	coord: 35..48
IPR011060	Ribulose-phosphate binding barrel	SUPERFAMILY	51366	Ribulose-phoshate binding barrel	coord: 3..232

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0026472.1	Sed0026472.1	mRNA
Sed0026472.2	Sed0026472.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000162	tryptophan biosynthetic process
biological_process	GO:0006568	tryptophan metabolic process
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005634	nucleus
molecular_function	GO:0004834	tryptophan synthase activity
molecular_function	GO:0003824	catalytic activity