Sed0026470 (gene) Chayote v1

Overview


Name	Sed0026470
Type	gene
Organism	Sechium edule (Chayote v1)
Description	THO complex, subunit
Location	LG13: 22460211 .. 22463674 (-)
RNA-Seq Expression	Sed0026470
Synteny	Sed0026470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGCTCCTCATAATCCGCCCAACCGGCAGCCGATCGGCCCGTCGTGCCCTTCGCCAACAGGTCGATAACCTCGCCGTTCAATTCGACTTGAGATTTCATCGAAGCTCAGAGCAGAGCTCAGCGTCTGACTGAATCCGGCGGCCAGTAATCTACAGAGATGGACGGAATGGTCGTAGAAGACGACCCCAAACCCTCGCCGCCGCAGAGCGAAGTATCTCCGTTCGAAATGCTTCAAGAGACCAAAGCCTCTGTGGAGGATATCGTCGCCAAGATGCTCTCCGTCAAGAAACACGGCGGCTCCAAAGCTCAGTTCAGAGAACTCGTTACTCAGATGTTCCTTCGTTTCGTAACCCTTCGCCAGGTTCTTCTTTCTTACCATCTCTTTTCTAGGGTTTTTAATTTCTATTGCATTGCTAATTTGCTGTGCGGAACTAGTGTGGGGTTTCATCACATACAAAATCTTATTAATTATGAGGGATTAGTCCACATCTAGAACACTCCTCACCTTTCAATTGTGTATGTGGAATGAGTATTCTCCAGATGGGAATACCATTTTGGATTACATCCGAATTTTAGGTTTATCAGCTTCGGTTGGGTCTGAATTTGTGGACTAAATATTCACTTAGGTTTTACCCGGTCGAGTTAAATTCAAATTTGTGGATCAAATAATGTTTGGAGCTCTAAGATTAATAACCCAAAAGTTTAAGTTGATGGGTTGGGGTAAAATTAATTATATCAACTAACATGGTATCTCTAAAGGATGACACAGTGGTCGAAGATTAGGCTTTGTAATTACGTTTCCCTCAAGGTACCGAGTTTGAGATTGAACTATGACTTTAATTTGTAAACACCTCCCATGCTCCATTCTTTTGATATCTCTCGGTCTCTGGCATAGAAACGGGTGTGGTTACCCTAGATATAGTGAAGCGAAGCTCTTATTTTTTTATTTCCAAAAAAAAAACACCATGAACTTCAATCATATTGTAGTAGGTTTAATTTCAAATTGCAGCTGGTGATGACTGTTGTGGCATAATGTTTTCTCACAGGTGAACCGCTCTATTTTGCTGGCAGAGGACAGGGTGAAAGCTGAAACAGAGCGAGCAAAAGCTTCAGTTGACTTTACGACTCTGCAACTTAACAACTTGATGTATGAAAAGAGTCACTGTGTTAAGGCAATCAAGGCATGTGAAAACTTCAAATCAAAGTATCCTGATATTGAACTTGTGTCTGAGGATGAGTTTTTACGGGATGCGCCTGAAGACGTTAAGAACTACGTGAGGTCAAAGGACAGCGCGCACAACCTGATGTTGCAGAGGCTTGACTATGAAATTTCCCAGGTGACCTTGAGTTTTTTTTATTATTATTGTCTCTTTGAATTAATGAGCACGGCTTTAGAATATTTCTGGTAGTGGAGACACTGATAGTCGTCTTCAAAGGATGGCGCGGTAGTCGAAGGCTTCAGTTTTGAAGGTGTGCTCTTCTCAAGGTCCTAGGTTCGAGACTTAACTGTTACATTAATTTATAGACACCTCCTGTGTCTGCATTCCTTCGATCTCTCTAGGTGCCTGGTCTAGGGATGGGCATGGTTACCCCGAGGATAGAGGAGCGAAACTTTGATTTTCCGATTTAAAAAAAAAAGTTTGAATTCTCCACCTTTAGTATCGAGGAAATACACAGTTGATTTTGTTTTTTTTGAGCTGAGTGTTTCTTTCTTCACTTGTTGCTATTAAGTGTATCAATATCCACCATTTTATCAGCGGAAAGAACTTTGCAAACGGCGAGATGAACTTGAACAACACAAGAAAAGCCTTCTAGAAGTCATTGCTAATAGAAAGAAATTCATGTCAAGTCTTCCTTCACACCTCAAGACCTTGAAAAAGGCATCTTTACCTGTACAGAATCAGTTGGGGATATTGCAGACAAAGAAATTAAAGCAACACCAACAAGCAGAGCTACTTCCACCTCCTCTTTATGTAATCTACTCGCAATTCTTGGCACAAAAGGAAGCATTTGGTGAGAATATTGAACTCGAGATTGTGGGAAGCATCAAAGATGCCCAAGCTTTTGCACACCGTCAAGCAAATAAGGATACTGGTACCTGGATATTTGTTTTCTATATGACCATTTGTTGATTAGTTATACCTTATATGATGATATTTACTTTTTTAATTATCTTGTTATGTATAGCCTATACAAATGCATTGAGTATATTGTTTTTTGTAATCGTCGTATGATTCTAAATCCTAGATTGTATTTATTTTCTATGAAAGGACAATTTGGAGATGCTAAAAACTACTTTCTTTGGACTGTATAGTCTGTATCAAGCACAATATCTACATATAACTCTTTCATCATTTGTTAATTTTTATAAGAATAGTATTTTCAATGCAAATATTTTAGGTGCATCAACCAATGTTGAGAGCTCCAAATCGGAGGATGATGCCCCCGAGGAAGATGATGACAGCCAAAGGAGGAGAAAGCGGCCAAAGATTCCAGCAAAGGTGAACGTTGAGCACGCAGGGATATATCAAGATCATCCGCTAAAGATCATCCTTCATATATATGACAATGAAACATGTGAACCCAAGTCAGTGAAATTGCTTTCTCTGAAGTTTGAATGCTTGTTAAAGTTGAACATTATTTGTGTTGGGATTGAAGGATCTCATGAAGAACCTGAGAATAACATCTTATGCAACTTGTTCCCTGATGACACTGGCCTTGAGCTGCCTCTCCAGGTATGAATCCAAAATATTTGGTTCATGTTTTGATCGTTCTGATCCCGCCGCCCCCAACTTACATTTTTAACAGAAAAGAAGGGAATCCTATGATGATGTATTATTTTGTTTTAAATGATGCAGTCAGCCAAGCTTGTTGTTGGTGAAACTCTTGCATTTAGTTATCAGAGAACCTCTAGACCTTATAAGTGGGCTCAACATTTGGCTGGAATTGATTTTTTGCCAGAATTGCCACCTTTGGTGTGTGCACAAGAATCTGCCAGTGGTGAAACTGTTAGAAGTGATATTGTATCGGGCCTCTCAATCTATCGTCATCAGAACCGAATACAGACAGTTGTGCAAAGATTGCGCTCTCGAAAAAAGGCTCAGCTGGCTCTTGTGTGAGTAATTGATTTGTATTCCAGCCCTTATCTTTACAAAACATGATCTAAAAGTGTATGTGATGGGAAAAAGGCTATTTTATGTTGTAGATTCGTTCTCTTGTTTTAAAAGCACGCAATTAACCAGTTCGTCGTTTGAGGTGGTGGGTGTATGGGATGACATACTGAAATTTTTATGGTTTGACCCTTCAAATAAATATCATTGAGGCATCTCATCACAAGGAGAAATTGTGAGGAATAGAAGTACTGGTTGTTGACCTGTTTTTTTTTTTTTTTAATATATATTTTCAAAGTGTCTGGGCTTAGCTTACGTGCACGTTGACTATTTTCATGGGATATACTGTCTGAC

mRNA sequence

CAGCTCCTCATAATCCGCCCAACCGGCAGCCGATCGGCCCGTCGTGCCCTTCGCCAACAGGTCGATAACCTCGCCGTTCAATTCGACTTGAGATTTCATCGAAGCTCAGAGCAGAGCTCAGCGTCTGACTGAATCCGGCGGCCAGTAATCTACAGAGATGGACGGAATGGTCGTAGAAGACGACCCCAAACCCTCGCCGCCGCAGAGCGAAGTATCTCCGTTCGAAATGCTTCAAGAGACCAAAGCCTCTGTGGAGGATATCGTCGCCAAGATGCTCTCCGTCAAGAAACACGGCGGCTCCAAAGCTCAGTTCAGAGAACTCGTTACTCAGATGTTCCTTCGTTTCGTAACCCTTCGCCAGGTGAACCGCTCTATTTTGCTGGCAGAGGACAGGGTGAAAGCTGAAACAGAGCGAGCAAAAGCTTCAGTTGACTTTACGACTCTGCAACTTAACAACTTGATGTATGAAAAGAGTCACTGTGTTAAGGCAATCAAGGCATGTGAAAACTTCAAATCAAAGTATCCTGATATTGAACTTGTGTCTGAGGATGAGTTTTTACGGGATGCGCCTGAAGACGTTAAGAACTACGTGAGGTCAAAGGACAGCGCGCACAACCTGATGTTGCAGAGGCTTGACTATGAAATTTCCCAGAATCAGTTGGGGATATTGCAGACAAAGAAATTAAAGCAACACCAACAAGCAGAGCTACTTCCACCTCCTCTTTATGTAATCTACTCGCAATTCTTGGCACAAAAGGAAGCATTTGGTGAGAATATTGAACTCGAGATTGTGGGAAGCATCAAAGATGCCCAAGCTTTTGCACACCGTCAAGCAAATAAGGATACTGGTGCATCAACCAATGTTGAGAGCTCCAAATCGGAGGATGATGCCCCCGAGGAAGATGATGACAGCCAAAGGAGGAGAAAGCGGCCAAAGATTCCAGCAAAGGTGAACGTTGAGCACGCAGGGATATATCAAGATCATCCGCTAAAGATCATCCTTCATATATATGACAATGAAACATGTGAACCCAAGTCAGTGAAATTGCTTTCTCTGAAGTTTGAATGCTTGTTAAAGTTGAACATTATTTGTGTTGGGATTGAAGGATCTCATGAAGAACCTGAGAATAACATCTTATGCAACTTGTTCCCTGATGACACTGGCCTTGAGCTGCCTCTCCAGTCAGCCAAGCTTGTTGTTGGTGAAACTCTTGCATTTAGTTATCAGAGAACCTCTAGACCTTATAAGTGGGCTCAACATTTGGCTGGAATTGATTTTTTGCCAGAATTGCCACCTTTGGTGTGTGCACAAGAATCTGCCAGTGGTGAAACTGTTAGAAGTGATATTGTATCGGGCCTCTCAATCTATCGTCATCAGAACCGAATACAGACAGTTGTGCAAAGATTGCGCTCTCGAAAAAAGGCTCAGCTGGCTCTTGTGTGAGTAATTGATTTGTATTCCAGCCCTTATCTTTACAAAACATGATCTAAAAGTGTATGTGATGGGAAAAAGGCTATTTTATGTTGTAGATTCGTTCTCTTGTTTTAAAAGCACGCAATTAACCAGTTCGTCGTTTGAGGTGGTGGGTGTATGGGATGACATACTGAAATTTTTATGGTTTGACCCTTCAAATAAATATCATTGAGGCATCTCATCACAAGGAGAAATTGTGAGGAATAGAAGTACTGGTTGTTGACCTGTTTTTTTTTTTTTTTAATATATATTTTCAAAGTGTCTGGGCTTAGCTTACGTGCACGTTGACTATTTTCATGGGATATACTGTCTGAC

Coding sequence (CDS)

ATGGACGGAATGGTCGTAGAAGACGACCCCAAACCCTCGCCGCCGCAGAGCGAAGTATCTCCGTTCGAAATGCTTCAAGAGACCAAAGCCTCTGTGGAGGATATCGTCGCCAAGATGCTCTCCGTCAAGAAACACGGCGGCTCCAAAGCTCAGTTCAGAGAACTCGTTACTCAGATGTTCCTTCGTTTCGTAACCCTTCGCCAGGTGAACCGCTCTATTTTGCTGGCAGAGGACAGGGTGAAAGCTGAAACAGAGCGAGCAAAAGCTTCAGTTGACTTTACGACTCTGCAACTTAACAACTTGATGTATGAAAAGAGTCACTGTGTTAAGGCAATCAAGGCATGTGAAAACTTCAAATCAAAGTATCCTGATATTGAACTTGTGTCTGAGGATGAGTTTTTACGGGATGCGCCTGAAGACGTTAAGAACTACGTGAGGTCAAAGGACAGCGCGCACAACCTGATGTTGCAGAGGCTTGACTATGAAATTTCCCAGAATCAGTTGGGGATATTGCAGACAAAGAAATTAAAGCAACACCAACAAGCAGAGCTACTTCCACCTCCTCTTTATGTAATCTACTCGCAATTCTTGGCACAAAAGGAAGCATTTGGTGAGAATATTGAACTCGAGATTGTGGGAAGCATCAAAGATGCCCAAGCTTTTGCACACCGTCAAGCAAATAAGGATACTGGTGCATCAACCAATGTTGAGAGCTCCAAATCGGAGGATGATGCCCCCGAGGAAGATGATGACAGCCAAAGGAGGAGAAAGCGGCCAAAGATTCCAGCAAAGGTGAACGTTGAGCACGCAGGGATATATCAAGATCATCCGCTAAAGATCATCCTTCATATATATGACAATGAAACATGTGAACCCAAGTCAGTGAAATTGCTTTCTCTGAAGTTTGAATGCTTGTTAAAGTTGAACATTATTTGTGTTGGGATTGAAGGATCTCATGAAGAACCTGAGAATAACATCTTATGCAACTTGTTCCCTGATGACACTGGCCTTGAGCTGCCTCTCCAGTCAGCCAAGCTTGTTGTTGGTGAAACTCTTGCATTTAGTTATCAGAGAACCTCTAGACCTTATAAGTGGGCTCAACATTTGGCTGGAATTGATTTTTTGCCAGAATTGCCACCTTTGGTGTGTGCACAAGAATCTGCCAGTGGTGAAACTGTTAGAAGTGATATTGTATCGGGCCTCTCAATCTATCGTCATCAGAACCGAATACAGACAGTTGTGCAAAGATTGCGCTCTCGAAAAAAGGCTCAGCTGGCTCTTGTGTGA

Protein sequence

MDGMVVEDDPKPSPPQSEVSPFEMLQETKASVEDIVAKMLSVKKHGGSKAQFRELVTQMFLRFVTLRQVNRSILLAEDRVKAETERAKASVDFTTLQLNNLMYEKSHCVKAIKACENFKSKYPDIELVSEDEFLRDAPEDVKNYVRSKDSAHNLMLQRLDYEISQNQLGILQTKKLKQHQQAELLPPPLYVIYSQFLAQKEAFGENIELEIVGSIKDAQAFAHRQANKDTGASTNVESSKSEDDAPEEDDDSQRRRKRPKIPAKVNVEHAGIYQDHPLKIILHIYDNETCEPKSVKLLSLKFECLLKLNIICVGIEGSHEEPENNILCNLFPDDTGLELPLQSAKLVVGETLAFSYQRTSRPYKWAQHLAGIDFLPELPPLVCAQESASGETVRSDIVSGLSIYRHQNRIQTVVQRLRSRKKAQLALV

Homology

[Close]

BLAST of Sed0026470 vs. NCBI nr
Match: XP_022982205.1 (THO complex subunit 5B [Cucurbita maxima])

HSP 1 Score: 690.6 bits (1781), Expect = 8.3e-195
Identity = 371/478 (77.62%), Postives = 397/478 (83.05%), Query Frame = 0


Query: 2   DGMVVEDDPKPSPPQSE---VSPFEMLQETKASVEDIVAKMLSVKKHGGSKAQFRELVTQ 61
           +GM++ED+ +P P +SE   +SP+EML+E+K+SVE+IV KMLS+KKHG  K Q RELVTQ
Sbjct: 7   EGMLIEDETEPPPQESETGKISPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQLRELVTQ 66

Query: 62  MFLRFVTLRQVNRSILLAEDRVKAETERAKASVDFTTLQLNNLMYEKSHCVKAIKACENF 121
           MFL FVTLRQ NRSILL EDRVKAETERAKA VDFTTLQLNNLMYEKSH VKAIKAC++F
Sbjct: 67  MFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAIKACKDF 126

Query: 122 KSKYPDIELVSEDEFLRDAPEDVKNYVRSKDSAHNLMLQRLDYEI--------------- 181
           KSKYPDIELVSEDEF RDAPED+KN +RSKDSAHNLMLQRLDYE+               
Sbjct: 127 KSKYPDIELVSEDEFFRDAPEDIKNSIRSKDSAHNLMLQRLDYELFQRKELCKRRDELEQ 186

Query: 182 --------------------------------SQNQLGILQTKKLKQHQQAELLPPPLYV 241
                                            QNQLG+LQTKKLKQHQ AELLPPPLYV
Sbjct: 187 HKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGMLQTKKLKQHQLAELLPPPLYV 246

Query: 242 IYSQFLAQKEAFGENIELEIVGSIKDAQAFAHRQANKDTGASTNVESSKSEDDAPEEDDD 301
           IYSQFLAQKEAFGENIELEIVGS+KDAQAFA  QANKD GASTNVESSK EDDAP+EDDD
Sbjct: 247 IYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKDAGASTNVESSKLEDDAPDEDDD 306

Query: 302 SQRRRKRP-KIPAKVNVEHAGIYQDHPLKIILHIYDNETCEPKSVKLLSLKFECLLKLNI 361
            QRRRKRP KIPAKVN+EHAGIYQ HPLKIILHIYDNETCEPKS+KLLSLKFECL KLNI
Sbjct: 307 GQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYDNETCEPKSMKLLSLKFECLSKLNI 366

Query: 362 ICVGIEGSHEEPENNILCNLFPDDTGLELPLQSAKLVVGETLAFSYQRTSRPYKWAQHLA 421
           ICVGIEGSHE PENNILCNLFPDDTGLELP QSAKLVV ETL+FS +RTSRPYKWAQHLA
Sbjct: 367 ICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVVRETLSFSDKRTSRPYKWAQHLA 426

Query: 422 GIDFLPELPPLVCAQESASGETVRSDIVSGLSIYRHQNRIQTVVQRLRSRKKAQLALV 429
           GIDFLPELPPLV AQESASGETVRSDIVSGLS+YR QNRIQTVVQRLRSRKKAQLALV
Sbjct: 427 GIDFLPELPPLVSAQESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQLALV 484

[Close]

BLAST of Sed0026470 vs. NCBI nr
Match: KAG7037799.1 (THO complex subunit 5B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 689.1 bits (1777), Expect = 2.4e-194
Identity = 370/478 (77.41%), Postives = 397/478 (83.05%), Query Frame = 0


Query: 2   DGMVVEDDPKPSPPQSE---VSPFEMLQETKASVEDIVAKMLSVKKHGGSKAQFRELVTQ 61
           +GM++ED+ +P P +SE   +SP+EML+E+K+SVE+IV KMLS+KKHG  K Q RELVTQ
Sbjct: 7   EGMLIEDETEPPPQESETGKISPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQLRELVTQ 66

Query: 62  MFLRFVTLRQVNRSILLAEDRVKAETERAKASVDFTTLQLNNLMYEKSHCVKAIKACENF 121
           MFL FVTLRQ NRSILL EDRVKAETERAKA VDFTTLQLNNLMYEKSH VKAIKAC++F
Sbjct: 67  MFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAIKACKDF 126

Query: 122 KSKYPDIELVSEDEFLRDAPEDVKNYVRSKDSAHNLMLQRLDYEI--------------- 181
           KSKYPDIELVSEDEF RDAPED+KN +RSKDSAHNLMLQRLDYE+               
Sbjct: 127 KSKYPDIELVSEDEFCRDAPEDIKNSIRSKDSAHNLMLQRLDYELFQRKELCKRRDELEQ 186

Query: 182 --------------------------------SQNQLGILQTKKLKQHQQAELLPPPLYV 241
                                            QNQLG+LQTKKLKQHQ AELLPPPLYV
Sbjct: 187 HKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGMLQTKKLKQHQLAELLPPPLYV 246

Query: 242 IYSQFLAQKEAFGENIELEIVGSIKDAQAFAHRQANKDTGASTNVESSKSEDDAPEEDDD 301
           IYSQFLAQKEAFGENIELEIVGS+KDAQAFA  QANKD GASTNVESSK EDDAP+EDDD
Sbjct: 247 IYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKDAGASTNVESSKLEDDAPDEDDD 306

Query: 302 SQRRRKRP-KIPAKVNVEHAGIYQDHPLKIILHIYDNETCEPKSVKLLSLKFECLLKLNI 361
            QRRRKRP KIPA+VN+EHAGIYQ HPLKIILHIYDNETCEPKS+KLLSLKFECL KLNI
Sbjct: 307 GQRRRKRPKKIPARVNIEHAGIYQVHPLKIILHIYDNETCEPKSMKLLSLKFECLSKLNI 366

Query: 362 ICVGIEGSHEEPENNILCNLFPDDTGLELPLQSAKLVVGETLAFSYQRTSRPYKWAQHLA 421
           ICVGIEGSHE PENNILCNLFPDDTGLELP QSAKLVV ETL+FS +RTSRPYKWAQHLA
Sbjct: 367 ICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVVRETLSFSDKRTSRPYKWAQHLA 426

Query: 422 GIDFLPELPPLVCAQESASGETVRSDIVSGLSIYRHQNRIQTVVQRLRSRKKAQLALV 429
           GIDFLPELPPLV AQESASGETVRSDIVSGLS+YR QNRIQTVVQRLRSRKKAQLALV
Sbjct: 427 GIDFLPELPPLVSAQESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQLALV 484

[Close]

BLAST of Sed0026470 vs. NCBI nr
Match: XP_004141378.1 (THO complex subunit 5B [Cucumis sativus] >KGN55195.1 hypothetical protein Csa_012617 [Cucumis sativus])

HSP 1 Score: 687.6 bits (1773), Expect = 7.0e-194
Identity = 369/478 (77.20%), Postives = 395/478 (82.64%), Query Frame = 0


Query: 2   DGMVVEDDPKPSPPQSE---VSPFEMLQETKASVEDIVAKMLSVKKHGGSKAQFRELVTQ 61
           +GM++ED+ +P PP SE   +SPFEML+E+K+ VEDIV KMLS+KKHG SK Q RELVTQ
Sbjct: 7   EGMLIEDETEPLPPDSETGKISPFEMLRESKSCVEDIVTKMLSIKKHGESKTQLRELVTQ 66

Query: 62  MFLRFVTLRQVNRSILLAEDRVKAETERAKASVDFTTLQLNNLMYEKSHCVKAIKACENF 121
           MFL FVTLRQ NRSILL EDRVK+ETERAKA VDFTTLQLNNLMYEKSH VKAIKAC++F
Sbjct: 67  MFLHFVTLRQANRSILLEEDRVKSETERAKAPVDFTTLQLNNLMYEKSHYVKAIKACKDF 126

Query: 122 KSKYPDIELVSEDEFLRDAPEDVKNYVRSKDSAHNLMLQRLDYEI--------------- 181
           KSKYPDIELVSEDEF RDAPE++KN +RSKDSAHNLMLQRLDYE+               
Sbjct: 127 KSKYPDIELVSEDEFFRDAPENIKNSMRSKDSAHNLMLQRLDYELFQRKELCKRRDELEQ 186

Query: 182 --------------------------------SQNQLGILQTKKLKQHQQAELLPPPLYV 241
                                            QNQLGILQTKKLKQHQ AELLPPPLYV
Sbjct: 187 HKKGLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGILQTKKLKQHQLAELLPPPLYV 246

Query: 242 IYSQFLAQKEAFGENIELEIVGSIKDAQAFAHRQANKDTGASTNVESSKSEDDAPEEDDD 301
           IYSQFLAQKEAFGENIELEIVGSIKDAQAFA  QANK+TGAS N ES+K EDDAP+EDDD
Sbjct: 247 IYSQFLAQKEAFGENIELEIVGSIKDAQAFARHQANKETGASNNAESNKLEDDAPDEDDD 306

Query: 302 SQRRRKRP-KIPAKVNVEHAGIYQDHPLKIILHIYDNETCEPKSVKLLSLKFECLLKLNI 361
            QRRRKRP KIPAKVN+EHAGIYQ HPLKIILHIYD+ETCEPKS+KLLSLKFECLLKLN+
Sbjct: 307 GQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYDSETCEPKSMKLLSLKFECLLKLNV 366

Query: 362 ICVGIEGSHEEPENNILCNLFPDDTGLELPLQSAKLVVGETLAFSYQRTSRPYKWAQHLA 421
           ICVGIEGSHE PENNILCNLFPDDTGLELP QSAKLVVGETLAFS +RTSRPYKWAQHLA
Sbjct: 367 ICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVVGETLAFSDKRTSRPYKWAQHLA 426

Query: 422 GIDFLPELPPLVCAQESASGETVRSDIVSGLSIYRHQNRIQTVVQRLRSRKKAQLALV 429
           GIDFLPELPPLV AQES SGE VR DIVSGLS+YR QNRIQTVVQRLRSRKKAQLALV
Sbjct: 427 GIDFLPELPPLVSAQESVSGEPVRGDIVSGLSMYRQQNRIQTVVQRLRSRKKAQLALV 484

[Close]

BLAST of Sed0026470 vs. NCBI nr
Match: KAG6608471.1 (THO complex subunit 5B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 686.0 bits (1769), Expect = 2.0e-193
Identity = 369/478 (77.20%), Postives = 396/478 (82.85%), Query Frame = 0


Query: 2   DGMVVEDDPKPSPPQSE---VSPFEMLQETKASVEDIVAKMLSVKKHGGSKAQFRELVTQ 61
           +GM++ED+ +P P +SE   +SP+EML+E+K+SVE+IV KMLS+KKHG  K Q RELVTQ
Sbjct: 7   EGMLIEDETEPPPQESETGKISPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQLRELVTQ 66

Query: 62  MFLRFVTLRQVNRSILLAEDRVKAETERAKASVDFTTLQLNNLMYEKSHCVKAIKACENF 121
           MFL FVTLRQ NRSILL EDRVKAETERAKA VDFTTLQLNNLMYEKSH VKAIKAC++F
Sbjct: 67  MFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAIKACKDF 126

Query: 122 KSKYPDIELVSEDEFLRDAPEDVKNYVRSKDSAHNLMLQRLDYEI--------------- 181
           KSKYPDIELVSEDEF RDAPED+KN +RSKDSA NLMLQRLDYE+               
Sbjct: 127 KSKYPDIELVSEDEFCRDAPEDIKNSIRSKDSAQNLMLQRLDYELFQRKELCKRRDELEQ 186

Query: 182 --------------------------------SQNQLGILQTKKLKQHQQAELLPPPLYV 241
                                            QNQLG+LQTKKLKQHQ AELLPPPLYV
Sbjct: 187 HKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGMLQTKKLKQHQLAELLPPPLYV 246

Query: 242 IYSQFLAQKEAFGENIELEIVGSIKDAQAFAHRQANKDTGASTNVESSKSEDDAPEEDDD 301
           IYSQFLAQKEAFGENIELEIVGS+KDAQAFA  QANKD GASTNVESSK EDDAP+EDDD
Sbjct: 247 IYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKDAGASTNVESSKLEDDAPDEDDD 306

Query: 302 SQRRRKRP-KIPAKVNVEHAGIYQDHPLKIILHIYDNETCEPKSVKLLSLKFECLLKLNI 361
            QRRRKRP KIPA+VN+EHAGIYQ HPLKIILHIYDNETCEPKS+KLLSLKFECL KLNI
Sbjct: 307 GQRRRKRPKKIPARVNIEHAGIYQVHPLKIILHIYDNETCEPKSMKLLSLKFECLSKLNI 366

Query: 362 ICVGIEGSHEEPENNILCNLFPDDTGLELPLQSAKLVVGETLAFSYQRTSRPYKWAQHLA 421
           ICVGIEGSHE PENNILCNLFPDDTGLELP QSAKLVV ETL+FS +RTSRPYKWAQHLA
Sbjct: 367 ICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVVRETLSFSDKRTSRPYKWAQHLA 426

Query: 422 GIDFLPELPPLVCAQESASGETVRSDIVSGLSIYRHQNRIQTVVQRLRSRKKAQLALV 429
           GIDFLPELPPLV AQESASGETVRSDIVSGLS+YR QNRIQTVVQRLRSRKKAQLALV
Sbjct: 427 GIDFLPELPPLVSAQESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQLALV 484

[Close]

BLAST of Sed0026470 vs. NCBI nr
Match: XP_022940324.1 (THO complex subunit 5B [Cucurbita moschata])

HSP 1 Score: 684.9 bits (1766), Expect = 4.5e-193
Identity = 368/478 (76.99%), Postives = 395/478 (82.64%), Query Frame = 0


Query: 2   DGMVVEDDPKPSPPQSE---VSPFEMLQETKASVEDIVAKMLSVKKHGGSKAQFRELVTQ 61
           +GM++ED+ +P P +SE   +SP+EML+E+K+SVE+IV KMLS+KKHG  K Q RELVTQ
Sbjct: 7   EGMLIEDETEPPPQESETGKISPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQLRELVTQ 66

Query: 62  MFLRFVTLRQVNRSILLAEDRVKAETERAKASVDFTTLQLNNLMYEKSHCVKAIKACENF 121
           MFL FVTLRQ NRSILL EDRVKAETERAKA VDFTTLQLNNLMYEKSH VKAIKAC++F
Sbjct: 67  MFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAIKACKDF 126

Query: 122 KSKYPDIELVSEDEFLRDAPEDVKNYVRSKDSAHNLMLQRLDYEI--------------- 181
           KSKYPDIELVSEDEF +DAPED+K  +RSKDSAHNLMLQRLDYE+               
Sbjct: 127 KSKYPDIELVSEDEFFQDAPEDIKKSIRSKDSAHNLMLQRLDYELFQRKELCKRRDELEQ 186

Query: 182 --------------------------------SQNQLGILQTKKLKQHQQAELLPPPLYV 241
                                            QNQLG+LQTKKLKQHQ AELLPPPLYV
Sbjct: 187 HKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGMLQTKKLKQHQLAELLPPPLYV 246

Query: 242 IYSQFLAQKEAFGENIELEIVGSIKDAQAFAHRQANKDTGASTNVESSKSEDDAPEEDDD 301
           IYSQFLAQKEAFGENIELEIVGS+KDAQAFA  QANKD GASTNVESSK EDDAP+EDDD
Sbjct: 247 IYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKDAGASTNVESSKLEDDAPDEDDD 306

Query: 302 SQRRRKRP-KIPAKVNVEHAGIYQDHPLKIILHIYDNETCEPKSVKLLSLKFECLLKLNI 361
            QRRRKRP KIPAKVN+EHAGIYQ HPLKIILHIYDNETCEPKS+KLLSLKFECL KLNI
Sbjct: 307 GQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYDNETCEPKSMKLLSLKFECLSKLNI 366

Query: 362 ICVGIEGSHEEPENNILCNLFPDDTGLELPLQSAKLVVGETLAFSYQRTSRPYKWAQHLA 421
           ICVGIEGSHE PENNILCNLFPDDTGLELP Q AKLVV ETL+FS +RTSRPYKWAQHLA
Sbjct: 367 ICVGIEGSHEGPENNILCNLFPDDTGLELPHQPAKLVVRETLSFSDKRTSRPYKWAQHLA 426

Query: 422 GIDFLPELPPLVCAQESASGETVRSDIVSGLSIYRHQNRIQTVVQRLRSRKKAQLALV 429
           GIDFLPELPPLV AQESASGETVRSDIVSGLS+YR QNRIQTVVQRLRSRKKAQLALV
Sbjct: 427 GIDFLPELPPLVSAQESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQLALV 484

[Close]

BLAST of Sed0026470 vs. ExPASy Swiss-Prot
Match: F4K4J0 (THO complex subunit 5B OS=Arabidopsis thaliana OX=3702 GN=THO5B PE=1 SV=1)

HSP 1 Score: 483.0 bits (1242), Expect = 3.4e-135
Identity = 270/485 (55.67%), Postives = 334/485 (68.87%), Query Frame = 0


Query: 2   DGMVVEDD-PKPS---------PPQSEVSPFEMLQETKASVEDIVAKMLSVKKHGGSKAQ 61
           +GMV  D+ P P          P +   SP E+L+E+K SVE+IVAKMLS+KK G  K++
Sbjct: 8   EGMVTADEFPTPEVTTIETIQPPREPGKSPLELLRESKTSVEEIVAKMLSMKKQGNHKSE 67

Query: 62  FRELVTQMFLRFVTLRQVNRSILLAEDRVKAETERAKASVDFTTLQLNNLMYEKSHCVKA 121
            REL+TQMFL FV LRQ NR+IL  ED+VKAETERAKA VDFTTLQL+NLMYEKSH VKA
Sbjct: 68  IRELLTQMFLNFVNLRQANRAILTEEDKVKAETERAKAPVDFTTLQLHNLMYEKSHYVKA 127

Query: 122 IKACENFKSKYPDIELVSEDEFLRDAPEDVKNYVRSKDSAHNLMLQRLDYEIS------- 181
           IKAC +FKSKYPDI+LV E +F R APE +K+   S DS+H LM +RL++E+        
Sbjct: 128 IKACRDFKSKYPDIDLVPEQDFFRHAPEAIKDQSLSSDSSHVLMPKRLNFELHQRKELCK 187

Query: 182 ----------------------------------------QNQLGILQTKKLKQHQQAEL 241
                                                   QN LGI  TKKLKQH  AEL
Sbjct: 188 HRARLEQQKKSLLETIAERKKFLSSLPLHLKSLKKASLPVQNHLGIQHTKKLKQHNLAEL 247

Query: 242 LPPPLYVIYSQFLAQKEAFGENIELEIVGSIKDAQAFAHRQANKDTGASTNVESSKSEDD 301
           LPPPLYV+YSQ LAQKEAF E+IELE+VGS+KDAQA+A +Q+ KD+G S+N ESS+ EDD
Sbjct: 248 LPPPLYVLYSQLLAQKEAFEESIELEVVGSLKDAQAYARQQSRKDSGMSSNTESSRLEDD 307

Query: 302 APEEDDDSQRRRKRP-KIPAKVNVEHAGIYQDHPLKIILHIYDNETCEPKSVKLLSLKFE 361
            P++DDD QRRRKRP K+ +K   + AG+YQ HPLKI+LHIYD+E  + KS+KL+ LKFE
Sbjct: 308 GPDDDDDGQRRRKRPKKLTSKEGSDKAGLYQVHPLKIVLHIYDDEIPDTKSLKLVILKFE 367

Query: 362 CLLKLNIICVGIEGSHEEPENNILCNLFPDDTGLELPLQSAKLVVGETLAFSYQRTSRPY 421
            LLKLN++CVG EGS + PE NI CNLFPDD GLE P QS KL++G+   F   RTSRPY
Sbjct: 368 YLLKLNVVCVGAEGSQDGPEKNIFCNLFPDDAGLEPPHQSTKLILGDGQTFDENRTSRPY 427

Query: 422 KWAQHLAGIDFLPELPPLVCAQESASGETVRSD-IVSGLSIYRHQNRIQTVVQRLRSRKK 428
           KW QHLAGID    + P++  QE+ + +  +SD  V  LS+YR Q+R+QTV++R+R RKK
Sbjct: 428 KWVQHLAGID----ISPVLLGQEAHNTDPAKSDTFVPDLSLYRQQHRVQTVLRRIRLRKK 487

[Close]

BLAST of Sed0026470 vs. ExPASy Swiss-Prot
Match: F4HRC1 (THO complex subunit 5A OS=Arabidopsis thaliana OX=3702 GN=THO5A PE=1 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 7.0e-112
Identity = 230/459 (50.11%), Postives = 298/459 (64.92%), Query Frame = 0


Query: 17  SEVSPFEMLQETKASVEDIVAKMLSVKKHGGSKAQFRELVTQMFLRFVTLRQVNRSILLA 76
           +E SP E+LQ+TKASVE I+AKMLS+K+ G  K++ REL+TQMFL F+ LRQ NRSIL+ 
Sbjct: 13  AEKSPLELLQQTKASVEAIIAKMLSIKQQGTPKSENRELLTQMFLNFINLRQANRSILIE 72

Query: 77  EDRVKAETERAKASVDFTTLQLNNLMYEKSHCVKAIKACENFKSKYPDIELVSEDEFLRD 136
           E++V+ ETE AK+ VDFTTL+L+NLMYEKSH +KA KA  +FKS+YP+I+L+SE +F  D
Sbjct: 73  EEKVRTETEIAKSPVDFTTLELHNLMYEKSHYLKANKASRDFKSRYPNIDLISEQDFFSD 132

Query: 137 APEDVKNYVRSKDSAHNLMLQRLDYEIS-------------------------------- 196
           APE +K+   S DS+H+LML+RL++E+                                 
Sbjct: 133 APEAIKSQTLSNDSSHDLMLKRLNFELHQRKELCKLRVRLEQQKKSLLESNAERNKFLSS 192

Query: 197 ---------------QNQLGILQTKKLKQHQQAELLPPPLYVIYSQFLAQKEAFGENIEL 256
                          Q+QL +   KKLK H  AELLPPPLYVIYSQF+A KEAF ENI++
Sbjct: 193 LPVHLKSLKKASLPVQSQLSLQNQKKLKYHNLAELLPPPLYVIYSQFMALKEAFEENIDV 252

Query: 257 EIVGSIKDAQAFAHRQANKDTGASTNVESSKSEDDAPEEDDDSQRRRKRPKIPAKVNVEH 316
           E+ GS+KDAQ +A +QA +      N ES + E    EE     R+RKR K   KV  + 
Sbjct: 253 EVSGSLKDAQTYARQQAEQ------NSESLRLEVGVDEE-----RQRKRLK---KVGSDE 312

Query: 317 AGIYQDHPLKIILHIYDNETCEPKSVKLLSLKFECLLKLNIICVGIEGSHEEPENNILCN 376
            G+YQ HPLK++LH+YD+E  +PKS +L+ LKFE LLKLN++CVGIE S +  E NILCN
Sbjct: 313 GGVYQVHPLKVVLHVYDDEITDPKSHELVMLKFEYLLKLNVVCVGIEESEDGLEKNILCN 372

Query: 377 LFPDDTGLELPLQSAKLVVGETLAFSYQRTSRPYKWAQHLAGIDFLPELPPLVCAQESAS 429
           LFPDD+GLE P QSAKL++G    F   RTSRPYKWAQHLAGI+ LPE+ P         
Sbjct: 373 LFPDDSGLEPPHQSAKLILGNDHVFDKSRTSRPYKWAQHLAGIETLPEMSPFF-----TD 432

[Close]

BLAST of Sed0026470 vs. ExPASy Swiss-Prot
Match: Q6NY52 (THO complex subunit 5 homolog OS=Danio rerio OX=7955 GN=thoc5 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.8e-27
Identity = 122/473 (25.79%), Postives = 207/473 (43.76%), Query Frame = 0


Query: 22  FEMLQETKASVEDIVAKMLSVK----KHGGSKAQFRELVTQMFLRFVTLRQVNRSILLAE 81
           + + +ET A++  +++++  +K    K G ++ + R    Q  + F+TL+++NR   +  
Sbjct: 52  YTLYKETCAALAKLMSEIQELKTSGAKDGSAEIELRR--KQSSIHFITLKKLNRLAHMRL 111

Query: 82  DRVKAETERAKASVDFTTLQLNNLMYEKSHCVKAIKACENFKSKYPDIELVSEDEFLRDA 141
            + + +T  AK  VD   LQL NL+YE  H  K I  C  FKS++ +IELVSEDEF +DA
Sbjct: 112 KKGRDQTHEAKQRVDVLHLQLQNLLYEVMHLQKEIGKCLEFKSQHEEIELVSEDEFFQDA 171

Query: 142 PEDVKNYVRSKDSAHNLMLQRLDYEISQN-----------------QLGILQTKKL---- 201
           P ++     +++  H L L RLD+E+ Q                  Q  I Q ++     
Sbjct: 172 PAEISRPQVTREDHHQLTLARLDWELDQRKRLAEQYKTSLSSKEKIQKAIEQKREYLSSL 231

Query: 202 --------------------------KQHQQAELLPPPLYVIYSQFLAQKEAFGENIELE 261
                                     KQ + A  LPPPLYV++ Q  A  +A  +N+ + 
Sbjct: 232 QPGLHNIMQASLPVQEYLSMPFEHMQKQAEVARHLPPPLYVLFVQAGAYGQACDKNLTVS 291

Query: 262 IVGSIKDAQAFAHRQANKDTGASTNVESSKSEDDAPEEDDDSQRRRKRPKIPAKVNVEHA 321
           I G + +A+A +              +S   E D+  E++    +R+RP +  +++ +  
Sbjct: 292 IRGDVDEAKALSRPPE----------DSQDDESDSDAEEEQQNTKRRRPTVGVQLDDKRK 351

Query: 322 GIYQDHPLKIILHIYDNETCEPKSVKLLSLKFECLLKLNIICV------------GIEGS 381
            + + HPL + + +     C+  SV  L L F  L+ LNI+ V             I   
Sbjct: 352 EMLRRHPLSLGIDL----KCKDGSV--LHLYFYYLMNLNILTVKTKVSTSVDLSGAISAG 411

Query: 382 HEEPENNILCNLFPDDTGLELPLQSAKL---VVGETLAFSY-QRTSRPYKWAQHLAGIDF 428
                 ++L  L+  D G E P  + +     VG T    Y      PY W Q L+G+ F
Sbjct: 412 ELLNSESLLNCLYASDHGNETPNPANRYQFDKVGITTFADYVSDLGHPYVWVQKLSGLQF 471

[Close]

BLAST of Sed0026470 vs. ExPASy Swiss-Prot
Match: Q13769 (THO complex subunit 5 homolog OS=Homo sapiens OX=9606 GN=THOC5 PE=1 SV=2)

HSP 1 Score: 124.4 bits (311), Expect = 3.1e-27
Identity = 119/473 (25.16%), Postives = 207/473 (43.76%), Query Frame = 0


Query: 22  FEMLQETKASVEDIVAKMLSVKKHGGSKA--QFRELVTQMFLRFVTLRQVNRSILLAEDR 81
           +E+ + T   ++ ++A++  +K  GG     +  E   Q  + F+TL+++NR   +   +
Sbjct: 52  YELYKYTCQELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKK 111

Query: 82  VKAETERAKASVDFTTLQLNNLMYEKSHCVKAIKACENFKSKYPDIELVSEDEFLRDAPE 141
            + +T  AK  VD   LQL NL+YE  H  K I  C  FKSK+ +I+LVS +EF ++AP 
Sbjct: 112 GRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPP 171

Query: 142 DVKNYVRSKDSAHNLMLQRLDYEISQNQ----------------LGILQTKK-------- 201
           D+     +    H   L RLD+E+ Q +                L  ++ KK        
Sbjct: 172 DISKAEVTMGDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQP 231

Query: 202 -----------------------LKQHQQAELLPPPLYVIYSQFLAQKEAFGENIELEIV 261
                                   KQ++ A  LPPPLYV++ Q  A  +A  + + + I 
Sbjct: 232 RLNSIMQASLPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACDKTLSVAIE 291

Query: 262 GSIKDAQAFAHRQANKDTGASTNVESSKSEDDAPEEDDDSQRRRKRPKIPAKVNVEHAGI 321
           GS+ +A+A                E S+ ++   + +++   +R+RP +  +++ +   +
Sbjct: 292 GSVDEAKALFKPP-----------EDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEM 351

Query: 322 YQDHPLKIILHIYDNETCEPKSVKLLSLKFECLLKLNIICVGIE-------------GSH 381
            + HPL ++L +     C+  SV  L L F  L+ LNI+ V  +             G  
Sbjct: 352 LKRHPLSVMLDL----KCKDDSV--LHLTFYYLMNLNIMTVKAKVTTAMELITPISAGDL 411

Query: 382 EEPENNILCNLFPDDTGLELPLQSAKLVVGE----TLAFSYQRTSRPYKWAQHLAGIDFL 428
             P++ + C L+P D G + P  + +    +    TL+        PY W Q L G+ F 
Sbjct: 412 LSPDSVLSC-LYPGDHGKKTPNPANQYQFDKVGILTLSDYVLELGHPYLWVQKLGGLHFP 471

[Close]

BLAST of Sed0026470 vs. ExPASy Swiss-Prot
Match: A4IFQ0 (THO complex subunit 5 homolog OS=Bos taurus OX=9913 GN=THOC5 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 2.6e-26
Identity = 120/472 (25.42%), Postives = 208/472 (44.07%), Query Frame = 0


Query: 22  FEMLQETKASVEDIVAKMLSVKKHGGSKA--QFRELVTQMFLRFVTLRQVNRSILLAEDR 81
           +E+ + T   ++ ++A++  +K  GG  A  +  +   Q  + F+TL+++NR   +   +
Sbjct: 52  YELYKYTCQELQRLMAEIQDLKSRGGKDAAVEIEDRRIQSCVHFMTLKKLNRLAHIRLKK 111

Query: 82  VKAETERAKASVDFTTLQLNNLMYEKSHCVKAIKACENFKSKYPDIELVSEDEFLRDAPE 141
            + +T  AK  VD   LQL NL+YE  H  K I  C  FKSK+ +I+LVS +EF ++AP 
Sbjct: 112 GRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPP 171

Query: 142 DVKNYVRSKDSAHNLMLQRLDYEISQNQ----------------LGILQTKK-------- 201
           D+     +    H   L RLD+E+ Q +                L  ++ KK        
Sbjct: 172 DISKAEVTMGDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQP 231

Query: 202 -----------------------LKQHQQAELLPPPLYVIYSQFLAQKEAFGENIELEIV 261
                                   KQ++ A  LPPPLYV++ Q  A  +A  + + + I 
Sbjct: 232 RLNSNMQASLPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACDKMLSVAIE 291

Query: 262 GSIKDAQAFAHRQANKDTGASTNVESSKSEDDAPEEDDDSQRRRKRPKIPAKVNVEHAGI 321
           GS+ +A+A                E S+ ++   + +++   +R+RP +  +++ +   +
Sbjct: 292 GSVDEAKALFKPP-----------EDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEM 351

Query: 322 YQDHPLKIILHIYDNETCEPKSVKLLSLKFECLLKLNIICVGIE-------------GSH 381
            + HPL ++L +     C+  SV  L L F  L+ LNI+ V                G  
Sbjct: 352 LKRHPLSVLLDL----KCKDDSV--LHLTFYYLMNLNIMTVKARVTTATELITPISAGDL 411

Query: 382 EEPENNILCNLFPDDTGLELPLQSAKLVVGE----TLAFSYQRTSRPYKWAQHLAGIDFL 428
             P++ + C L+P D G + P  + +    +    TL         PY W Q L G+ F 
Sbjct: 412 LSPDSVLSC-LYPGDHGKKTPNPANQYQFDKVGILTLRDYVLDLGHPYLWVQKLGGLHFP 471

[Close]

BLAST of Sed0026470 vs. ExPASy TrEMBL
Match: A0A6J1J206 (THO complex subunit 5B OS=Cucurbita maxima OX=3661 GN=LOC111481103 PE=3 SV=1)

HSP 1 Score: 690.6 bits (1781), Expect = 4.0e-195
Identity = 371/478 (77.62%), Postives = 397/478 (83.05%), Query Frame = 0


Query: 2   DGMVVEDDPKPSPPQSE---VSPFEMLQETKASVEDIVAKMLSVKKHGGSKAQFRELVTQ 61
           +GM++ED+ +P P +SE   +SP+EML+E+K+SVE+IV KMLS+KKHG  K Q RELVTQ
Sbjct: 7   EGMLIEDETEPPPQESETGKISPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQLRELVTQ 66

Query: 62  MFLRFVTLRQVNRSILLAEDRVKAETERAKASVDFTTLQLNNLMYEKSHCVKAIKACENF 121
           MFL FVTLRQ NRSILL EDRVKAETERAKA VDFTTLQLNNLMYEKSH VKAIKAC++F
Sbjct: 67  MFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAIKACKDF 126

Query: 122 KSKYPDIELVSEDEFLRDAPEDVKNYVRSKDSAHNLMLQRLDYEI--------------- 181
           KSKYPDIELVSEDEF RDAPED+KN +RSKDSAHNLMLQRLDYE+               
Sbjct: 127 KSKYPDIELVSEDEFFRDAPEDIKNSIRSKDSAHNLMLQRLDYELFQRKELCKRRDELEQ 186

Query: 182 --------------------------------SQNQLGILQTKKLKQHQQAELLPPPLYV 241
                                            QNQLG+LQTKKLKQHQ AELLPPPLYV
Sbjct: 187 HKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGMLQTKKLKQHQLAELLPPPLYV 246

Query: 242 IYSQFLAQKEAFGENIELEIVGSIKDAQAFAHRQANKDTGASTNVESSKSEDDAPEEDDD 301
           IYSQFLAQKEAFGENIELEIVGS+KDAQAFA  QANKD GASTNVESSK EDDAP+EDDD
Sbjct: 247 IYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKDAGASTNVESSKLEDDAPDEDDD 306

Query: 302 SQRRRKRP-KIPAKVNVEHAGIYQDHPLKIILHIYDNETCEPKSVKLLSLKFECLLKLNI 361
            QRRRKRP KIPAKVN+EHAGIYQ HPLKIILHIYDNETCEPKS+KLLSLKFECL KLNI
Sbjct: 307 GQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYDNETCEPKSMKLLSLKFECLSKLNI 366

Query: 362 ICVGIEGSHEEPENNILCNLFPDDTGLELPLQSAKLVVGETLAFSYQRTSRPYKWAQHLA 421
           ICVGIEGSHE PENNILCNLFPDDTGLELP QSAKLVV ETL+FS +RTSRPYKWAQHLA
Sbjct: 367 ICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVVRETLSFSDKRTSRPYKWAQHLA 426

Query: 422 GIDFLPELPPLVCAQESASGETVRSDIVSGLSIYRHQNRIQTVVQRLRSRKKAQLALV 429
           GIDFLPELPPLV AQESASGETVRSDIVSGLS+YR QNRIQTVVQRLRSRKKAQLALV
Sbjct: 427 GIDFLPELPPLVSAQESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQLALV 484

[Close]

BLAST of Sed0026470 vs. ExPASy TrEMBL
Match: A0A0A0KZS2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639830 PE=3 SV=1)

HSP 1 Score: 687.6 bits (1773), Expect = 3.4e-194
Identity = 369/478 (77.20%), Postives = 395/478 (82.64%), Query Frame = 0


Query: 2   DGMVVEDDPKPSPPQSE---VSPFEMLQETKASVEDIVAKMLSVKKHGGSKAQFRELVTQ 61
           +GM++ED+ +P PP SE   +SPFEML+E+K+ VEDIV KMLS+KKHG SK Q RELVTQ
Sbjct: 7   EGMLIEDETEPLPPDSETGKISPFEMLRESKSCVEDIVTKMLSIKKHGESKTQLRELVTQ 66

Query: 62  MFLRFVTLRQVNRSILLAEDRVKAETERAKASVDFTTLQLNNLMYEKSHCVKAIKACENF 121
           MFL FVTLRQ NRSILL EDRVK+ETERAKA VDFTTLQLNNLMYEKSH VKAIKAC++F
Sbjct: 67  MFLHFVTLRQANRSILLEEDRVKSETERAKAPVDFTTLQLNNLMYEKSHYVKAIKACKDF 126

Query: 122 KSKYPDIELVSEDEFLRDAPEDVKNYVRSKDSAHNLMLQRLDYEI--------------- 181
           KSKYPDIELVSEDEF RDAPE++KN +RSKDSAHNLMLQRLDYE+               
Sbjct: 127 KSKYPDIELVSEDEFFRDAPENIKNSMRSKDSAHNLMLQRLDYELFQRKELCKRRDELEQ 186

Query: 182 --------------------------------SQNQLGILQTKKLKQHQQAELLPPPLYV 241
                                            QNQLGILQTKKLKQHQ AELLPPPLYV
Sbjct: 187 HKKGLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGILQTKKLKQHQLAELLPPPLYV 246

Query: 242 IYSQFLAQKEAFGENIELEIVGSIKDAQAFAHRQANKDTGASTNVESSKSEDDAPEEDDD 301
           IYSQFLAQKEAFGENIELEIVGSIKDAQAFA  QANK+TGAS N ES+K EDDAP+EDDD
Sbjct: 247 IYSQFLAQKEAFGENIELEIVGSIKDAQAFARHQANKETGASNNAESNKLEDDAPDEDDD 306

Query: 302 SQRRRKRP-KIPAKVNVEHAGIYQDHPLKIILHIYDNETCEPKSVKLLSLKFECLLKLNI 361
            QRRRKRP KIPAKVN+EHAGIYQ HPLKIILHIYD+ETCEPKS+KLLSLKFECLLKLN+
Sbjct: 307 GQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYDSETCEPKSMKLLSLKFECLLKLNV 366

Query: 362 ICVGIEGSHEEPENNILCNLFPDDTGLELPLQSAKLVVGETLAFSYQRTSRPYKWAQHLA 421
           ICVGIEGSHE PENNILCNLFPDDTGLELP QSAKLVVGETLAFS +RTSRPYKWAQHLA
Sbjct: 367 ICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVVGETLAFSDKRTSRPYKWAQHLA 426

Query: 422 GIDFLPELPPLVCAQESASGETVRSDIVSGLSIYRHQNRIQTVVQRLRSRKKAQLALV 429
           GIDFLPELPPLV AQES SGE VR DIVSGLS+YR QNRIQTVVQRLRSRKKAQLALV
Sbjct: 427 GIDFLPELPPLVSAQESVSGEPVRGDIVSGLSMYRQQNRIQTVVQRLRSRKKAQLALV 484

[Close]

BLAST of Sed0026470 vs. ExPASy TrEMBL
Match: A0A6J1FJR5 (THO complex subunit 5B OS=Cucurbita moschata OX=3662 GN=LOC111445974 PE=3 SV=1)

HSP 1 Score: 684.9 bits (1766), Expect = 2.2e-193
Identity = 368/478 (76.99%), Postives = 395/478 (82.64%), Query Frame = 0


Query: 2   DGMVVEDDPKPSPPQSE---VSPFEMLQETKASVEDIVAKMLSVKKHGGSKAQFRELVTQ 61
           +GM++ED+ +P P +SE   +SP+EML+E+K+SVE+IV KMLS+KKHG  K Q RELVTQ
Sbjct: 7   EGMLIEDETEPPPQESETGKISPYEMLRESKSSVEEIVTKMLSIKKHGEPKTQLRELVTQ 66

Query: 62  MFLRFVTLRQVNRSILLAEDRVKAETERAKASVDFTTLQLNNLMYEKSHCVKAIKACENF 121
           MFL FVTLRQ NRSILL EDRVKAETERAKA VDFTTLQLNNLMYEKSH VKAIKAC++F
Sbjct: 67  MFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLNNLMYEKSHYVKAIKACKDF 126

Query: 122 KSKYPDIELVSEDEFLRDAPEDVKNYVRSKDSAHNLMLQRLDYEI--------------- 181
           KSKYPDIELVSEDEF +DAPED+K  +RSKDSAHNLMLQRLDYE+               
Sbjct: 127 KSKYPDIELVSEDEFFQDAPEDIKKSIRSKDSAHNLMLQRLDYELFQRKELCKRRDELEQ 186

Query: 182 --------------------------------SQNQLGILQTKKLKQHQQAELLPPPLYV 241
                                            QNQLG+LQTKKLKQHQ AELLPPPLYV
Sbjct: 187 HKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGMLQTKKLKQHQLAELLPPPLYV 246

Query: 242 IYSQFLAQKEAFGENIELEIVGSIKDAQAFAHRQANKDTGASTNVESSKSEDDAPEEDDD 301
           IYSQFLAQKEAFGENIELEIVGS+KDAQAFA  QANKD GASTNVESSK EDDAP+EDDD
Sbjct: 247 IYSQFLAQKEAFGENIELEIVGSVKDAQAFARHQANKDAGASTNVESSKLEDDAPDEDDD 306

Query: 302 SQRRRKRP-KIPAKVNVEHAGIYQDHPLKIILHIYDNETCEPKSVKLLSLKFECLLKLNI 361
            QRRRKRP KIPAKVN+EHAGIYQ HPLKIILHIYDNETCEPKS+KLLSLKFECL KLNI
Sbjct: 307 GQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYDNETCEPKSMKLLSLKFECLSKLNI 366

Query: 362 ICVGIEGSHEEPENNILCNLFPDDTGLELPLQSAKLVVGETLAFSYQRTSRPYKWAQHLA 421
           ICVGIEGSHE PENNILCNLFPDDTGLELP Q AKLVV ETL+FS +RTSRPYKWAQHLA
Sbjct: 367 ICVGIEGSHEGPENNILCNLFPDDTGLELPHQPAKLVVRETLSFSDKRTSRPYKWAQHLA 426

Query: 422 GIDFLPELPPLVCAQESASGETVRSDIVSGLSIYRHQNRIQTVVQRLRSRKKAQLALV 429
           GIDFLPELPPLV AQESASGETVRSDIVSGLS+YR QNRIQTVVQRLRSRKKAQLALV
Sbjct: 427 GIDFLPELPPLVSAQESASGETVRSDIVSGLSMYRQQNRIQTVVQRLRSRKKAQLALV 484

[Close]

BLAST of Sed0026470 vs. ExPASy TrEMBL
Match: A0A5A7VBI1 (THO complex subunit 5B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G00890 PE=3 SV=1)

HSP 1 Score: 682.9 bits (1761), Expect = 8.3e-193
Identity = 367/478 (76.78%), Postives = 391/478 (81.80%), Query Frame = 0


Query: 2   DGMVVEDDPKPSPPQSE---VSPFEMLQETKASVEDIVAKMLSVKKHGGSKAQFRELVTQ 61
           +GM++ED+  P PP SE   +SPFEML+E+K+ VEDIV KMLS+KKHG  K Q RELVTQ
Sbjct: 7   EGMLIEDETAPLPPDSETGKISPFEMLRESKSCVEDIVTKMLSIKKHGEPKTQLRELVTQ 66

Query: 62  MFLRFVTLRQVNRSILLAEDRVKAETERAKASVDFTTLQLNNLMYEKSHCVKAIKACENF 121
           MFL FVTLRQ NRSILL EDRVK+ETERAKA VDFTTLQLNNLMYEKSH VKAIKAC++F
Sbjct: 67  MFLHFVTLRQANRSILLEEDRVKSETERAKAPVDFTTLQLNNLMYEKSHYVKAIKACKDF 126

Query: 122 KSKYPDIELVSEDEFLRDAPEDVKNYVRSKDSAHNLMLQRLDYEI--------------- 181
           KSKYPDIELVSEDEF RDAPE++KN  RSKDSAHNLMLQRLDYE+               
Sbjct: 127 KSKYPDIELVSEDEFFRDAPENIKNSTRSKDSAHNLMLQRLDYELFQRKELCKRRDELEQ 186

Query: 182 --------------------------------SQNQLGILQTKKLKQHQQAELLPPPLYV 241
                                            QNQLGILQTKKLKQHQ AELLPPPLYV
Sbjct: 187 HKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGILQTKKLKQHQLAELLPPPLYV 246

Query: 242 IYSQFLAQKEAFGENIELEIVGSIKDAQAFAHRQANKDTGASTNVESSKSEDDAPEEDDD 301
           IYSQFLAQKEAFGENIELEIVGSIKDAQAFA  QANK+TG+S N ES+K EDDAP+EDDD
Sbjct: 247 IYSQFLAQKEAFGENIELEIVGSIKDAQAFARHQANKETGSSNNAESNKLEDDAPDEDDD 306

Query: 302 SQRRRKRP-KIPAKVNVEHAGIYQDHPLKIILHIYDNETCEPKSVKLLSLKFECLLKLNI 361
            QRRRKRP KIPAKVN+EHAGIYQ HPLKIILHIYDNE CEPKS+KLLSLKFECLLKLN+
Sbjct: 307 GQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYDNEICEPKSMKLLSLKFECLLKLNV 366

Query: 362 ICVGIEGSHEEPENNILCNLFPDDTGLELPLQSAKLVVGETLAFSYQRTSRPYKWAQHLA 421
           ICVGIEGSHE PENNILCNLFPDDTGLELP QSAKLVVGETLAFS +RTSRPYKWAQHLA
Sbjct: 367 ICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVVGETLAFSDKRTSRPYKWAQHLA 426

Query: 422 GIDFLPELPPLVCAQESASGETVRSDIVSGLSIYRHQNRIQTVVQRLRSRKKAQLALV 429
           GIDFLPELPPLV AQES SGE VR DIVSGLS+YR QNRIQTVVQRLRSRKKAQLALV
Sbjct: 427 GIDFLPELPPLVSAQESVSGEPVRGDIVSGLSMYRQQNRIQTVVQRLRSRKKAQLALV 484

[Close]

BLAST of Sed0026470 vs. ExPASy TrEMBL
Match: A0A1S3BTI6 (THO complex subunit 5B OS=Cucumis melo OX=3656 GN=LOC103493544 PE=3 SV=1)

HSP 1 Score: 682.9 bits (1761), Expect = 8.3e-193
Identity = 367/478 (76.78%), Postives = 391/478 (81.80%), Query Frame = 0


Query: 2   DGMVVEDDPKPSPPQSE---VSPFEMLQETKASVEDIVAKMLSVKKHGGSKAQFRELVTQ 61
           +GM++ED+  P PP SE   +SPFEML+E+K+ VEDIV KMLS+KKHG  K Q RELVTQ
Sbjct: 7   EGMLIEDETAPLPPDSETGKISPFEMLRESKSCVEDIVTKMLSIKKHGEPKTQLRELVTQ 66

Query: 62  MFLRFVTLRQVNRSILLAEDRVKAETERAKASVDFTTLQLNNLMYEKSHCVKAIKACENF 121
           MFL FVTLRQ NRSILL EDRVK+ETERAKA VDFTTLQLNNLMYEKSH VKAIKAC++F
Sbjct: 67  MFLHFVTLRQANRSILLEEDRVKSETERAKAPVDFTTLQLNNLMYEKSHYVKAIKACKDF 126

Query: 122 KSKYPDIELVSEDEFLRDAPEDVKNYVRSKDSAHNLMLQRLDYEI--------------- 181
           KSKYPDIELVSEDEF RDAPE++KN  RSKDSAHNLMLQRLDYE+               
Sbjct: 127 KSKYPDIELVSEDEFFRDAPENIKNSTRSKDSAHNLMLQRLDYELFQRKELCKRRDELEQ 186

Query: 182 --------------------------------SQNQLGILQTKKLKQHQQAELLPPPLYV 241
                                            QNQLGILQTKKLKQHQ AELLPPPLYV
Sbjct: 187 HKKSLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGILQTKKLKQHQLAELLPPPLYV 246

Query: 242 IYSQFLAQKEAFGENIELEIVGSIKDAQAFAHRQANKDTGASTNVESSKSEDDAPEEDDD 301
           IYSQFLAQKEAFGENIELEIVGSIKDAQAFA  QANK+TG+S N ES+K EDDAP+EDDD
Sbjct: 247 IYSQFLAQKEAFGENIELEIVGSIKDAQAFARHQANKETGSSNNAESNKLEDDAPDEDDD 306

Query: 302 SQRRRKRP-KIPAKVNVEHAGIYQDHPLKIILHIYDNETCEPKSVKLLSLKFECLLKLNI 361
            QRRRKRP KIPAKVN+EHAGIYQ HPLKIILHIYDNE CEPKS+KLLSLKFECLLKLN+
Sbjct: 307 GQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYDNEICEPKSMKLLSLKFECLLKLNV 366

Query: 362 ICVGIEGSHEEPENNILCNLFPDDTGLELPLQSAKLVVGETLAFSYQRTSRPYKWAQHLA 421
           ICVGIEGSHE PENNILCNLFPDDTGLELP QSAKLVVGETLAFS +RTSRPYKWAQHLA
Sbjct: 367 ICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVVGETLAFSDKRTSRPYKWAQHLA 426

Query: 422 GIDFLPELPPLVCAQESASGETVRSDIVSGLSIYRHQNRIQTVVQRLRSRKKAQLALV 429
           GIDFLPELPPLV AQES SGE VR DIVSGLS+YR QNRIQTVVQRLRSRKKAQLALV
Sbjct: 427 GIDFLPELPPLVSAQESVSGEPVRGDIVSGLSMYRQQNRIQTVVQRLRSRKKAQLALV 484

[Close]

BLAST of Sed0026470 vs. TAIR 10
Match: AT5G42920.2 (THO complex, subunit 5 )

HSP 1 Score: 483.0 bits (1242), Expect = 2.4e-136
Identity = 270/485 (55.67%), Postives = 334/485 (68.87%), Query Frame = 0


Query: 2   DGMVVEDD-PKPS---------PPQSEVSPFEMLQETKASVEDIVAKMLSVKKHGGSKAQ 61
           +GMV  D+ P P          P +   SP E+L+E+K SVE+IVAKMLS+KK G  K++
Sbjct: 8   EGMVTADEFPTPEVTTIETIQPPREPGKSPLELLRESKTSVEEIVAKMLSMKKQGNHKSE 67

Query: 62  FRELVTQMFLRFVTLRQVNRSILLAEDRVKAETERAKASVDFTTLQLNNLMYEKSHCVKA 121
            REL+TQMFL FV LRQ NR+IL  ED+VKAETERAKA VDFTTLQL+NLMYEKSH VKA
Sbjct: 68  IRELLTQMFLNFVNLRQANRAILTEEDKVKAETERAKAPVDFTTLQLHNLMYEKSHYVKA 127

Query: 122 IKACENFKSKYPDIELVSEDEFLRDAPEDVKNYVRSKDSAHNLMLQRLDYEIS------- 181
           IKAC +FKSKYPDI+LV E +F R APE +K+   S DS+H LM +RL++E+        
Sbjct: 128 IKACRDFKSKYPDIDLVPEQDFFRHAPEAIKDQSLSSDSSHVLMPKRLNFELHQRKELCK 187

Query: 182 ----------------------------------------QNQLGILQTKKLKQHQQAEL 241
                                                   QN LGI  TKKLKQH  AEL
Sbjct: 188 HRARLEQQKKSLLETIAERKKFLSSLPLHLKSLKKASLPVQNHLGIQHTKKLKQHNLAEL 247

Query: 242 LPPPLYVIYSQFLAQKEAFGENIELEIVGSIKDAQAFAHRQANKDTGASTNVESSKSEDD 301
           LPPPLYV+YSQ LAQKEAF E+IELE+VGS+KDAQA+A +Q+ KD+G S+N ESS+ EDD
Sbjct: 248 LPPPLYVLYSQLLAQKEAFEESIELEVVGSLKDAQAYARQQSRKDSGMSSNTESSRLEDD 307

Query: 302 APEEDDDSQRRRKRP-KIPAKVNVEHAGIYQDHPLKIILHIYDNETCEPKSVKLLSLKFE 361
            P++DDD QRRRKRP K+ +K   + AG+YQ HPLKI+LHIYD+E  + KS+KL+ LKFE
Sbjct: 308 GPDDDDDGQRRRKRPKKLTSKEGSDKAGLYQVHPLKIVLHIYDDEIPDTKSLKLVILKFE 367

Query: 362 CLLKLNIICVGIEGSHEEPENNILCNLFPDDTGLELPLQSAKLVVGETLAFSYQRTSRPY 421
            LLKLN++CVG EGS + PE NI CNLFPDD GLE P QS KL++G+   F   RTSRPY
Sbjct: 368 YLLKLNVVCVGAEGSQDGPEKNIFCNLFPDDAGLEPPHQSTKLILGDGQTFDENRTSRPY 427

Query: 422 KWAQHLAGIDFLPELPPLVCAQESASGETVRSD-IVSGLSIYRHQNRIQTVVQRLRSRKK 428
           KW QHLAGID    + P++  QE+ + +  +SD  V  LS+YR Q+R+QTV++R+R RKK
Sbjct: 428 KWVQHLAGID----ISPVLLGQEAHNTDPAKSDTFVPDLSLYRQQHRVQTVLRRIRLRKK 487

[Close]

BLAST of Sed0026470 vs. TAIR 10
Match: AT1G45233.2 (THO complex, subunit 5 )

HSP 1 Score: 405.6 bits (1041), Expect = 4.9e-113
Identity = 230/459 (50.11%), Postives = 298/459 (64.92%), Query Frame = 0


Query: 17  SEVSPFEMLQETKASVEDIVAKMLSVKKHGGSKAQFRELVTQMFLRFVTLRQVNRSILLA 76
           +E SP E+LQ+TKASVE I+AKMLS+K+ G  K++ REL+TQMFL F+ LRQ NRSIL+ 
Sbjct: 13  AEKSPLELLQQTKASVEAIIAKMLSIKQQGTPKSENRELLTQMFLNFINLRQANRSILIE 72

Query: 77  EDRVKAETERAKASVDFTTLQLNNLMYEKSHCVKAIKACENFKSKYPDIELVSEDEFLRD 136
           E++V+ ETE AK+ VDFTTL+L+NLMYEKSH +KA KA  +FKS+YP+I+L+SE +F  D
Sbjct: 73  EEKVRTETEIAKSPVDFTTLELHNLMYEKSHYLKANKASRDFKSRYPNIDLISEQDFFSD 132

Query: 137 APEDVKNYVRSKDSAHNLMLQRLDYEIS-------------------------------- 196
           APE +K+   S DS+H+LML+RL++E+                                 
Sbjct: 133 APEAIKSQTLSNDSSHDLMLKRLNFELHQRKELCKLRVRLEQQKKSLLESNAERNKFLSS 192

Query: 197 ---------------QNQLGILQTKKLKQHQQAELLPPPLYVIYSQFLAQKEAFGENIEL 256
                          Q+QL +   KKLK H  AELLPPPLYVIYSQF+A KEAF ENI++
Sbjct: 193 LPVHLKSLKKASLPVQSQLSLQNQKKLKYHNLAELLPPPLYVIYSQFMALKEAFEENIDV 252

Query: 257 EIVGSIKDAQAFAHRQANKDTGASTNVESSKSEDDAPEEDDDSQRRRKRPKIPAKVNVEH 316
           E+ GS+KDAQ +A +QA +      N ES + E    EE     R+RKR K   KV  + 
Sbjct: 253 EVSGSLKDAQTYARQQAEQ------NSESLRLEVGVDEE-----RQRKRLK---KVGSDE 312

Query: 317 AGIYQDHPLKIILHIYDNETCEPKSVKLLSLKFECLLKLNIICVGIEGSHEEPENNILCN 376
            G+YQ HPLK++LH+YD+E  +PKS +L+ LKFE LLKLN++CVGIE S +  E NILCN
Sbjct: 313 GGVYQVHPLKVVLHVYDDEITDPKSHELVMLKFEYLLKLNVVCVGIEESEDGLEKNILCN 372

Query: 377 LFPDDTGLELPLQSAKLVVGETLAFSYQRTSRPYKWAQHLAGIDFLPELPPLVCAQESAS 429
           LFPDD+GLE P QSAKL++G    F   RTSRPYKWAQHLAGI+ LPE+ P         
Sbjct: 373 LFPDDSGLEPPHQSAKLILGNDHVFDKSRTSRPYKWAQHLAGIETLPEMSPFF-----TD 432

[Close]

BLAST of Sed0026470 vs. TAIR 10
Match: AT5G42920.1 (THO complex, subunit 5 )

HSP 1 Score: 373.6 bits (958), Expect = 2.1e-103
Identity = 204/375 (54.40%), Postives = 254/375 (67.73%), Query Frame = 0


Query: 102 MYEKSHCVKAIKACENFKSKYPDIELVSEDEFLRDAPEDVKNYVRSKDSAHNLMLQRLDY 161
           MYEKSH VKAIKAC +FKSKYPDI+LV E +F R APE +K+   S DS+H LM +RL++
Sbjct: 1   MYEKSHYVKAIKACRDFKSKYPDIDLVPEQDFFRHAPEAIKDQSLSSDSSHVLMPKRLNF 60

Query: 162 EIS-----------------------------------------------QNQLGILQTK 221
           E+                                                QN LGI  TK
Sbjct: 61  ELHQRKELCKHRARLEQQKKSLLETIAERKKFLSSLPLHLKSLKKASLPVQNHLGIQHTK 120

Query: 222 KLKQHQQAELLPPPLYVIYSQFLAQKEAFGENIELEIVGSIKDAQAFAHRQANKDTGAST 281
           KLKQH  AELLPPPLYV+YSQ LAQKEAF E+IELE+VGS+KDAQA+A +Q+ KD+G S+
Sbjct: 121 KLKQHNLAELLPPPLYVLYSQLLAQKEAFEESIELEVVGSLKDAQAYARQQSRKDSGMSS 180

Query: 282 NVESSKSEDDAPEEDDDSQRRRKRP-KIPAKVNVEHAGIYQDHPLKIILHIYDNETCEPK 341
           N ESS+ EDD P++DDD QRRRKRP K+ +K   + AG+YQ HPLKI+LHIYD+E  + K
Sbjct: 181 NTESSRLEDDGPDDDDDGQRRRKRPKKLTSKEGSDKAGLYQVHPLKIVLHIYDDEIPDTK 240

Query: 342 SVKLLSLKFECLLKLNIICVGIEGSHEEPENNILCNLFPDDTGLELPLQSAKLVVGETLA 401
           S+KL+ LKFE LLKLN++CVG EGS + PE NI CNLFPDD GLE P QS KL++G+   
Sbjct: 241 SLKLVILKFEYLLKLNVVCVGAEGSQDGPEKNIFCNLFPDDAGLEPPHQSTKLILGDGQT 300

Query: 402 FSYQRTSRPYKWAQHLAGIDFLPELPPLVCAQESASGETVRSD-IVSGLSIYRHQNRIQT 428
           F   RTSRPYKW QHLAGID    + P++  QE+ + +  +SD  V  LS+YR Q+R+QT
Sbjct: 301 FDENRTSRPYKWVQHLAGID----ISPVLLGQEAHNTDPAKSDTFVPDLSLYRQQHRVQT 360

The following BLAST results are available for this feature:

BLAST of Sed0026470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022982205.1	8.3e-195	77.62	THO complex subunit 5B [Cucurbita maxima]	[more]
KAG7037799.1	2.4e-194	77.41	THO complex subunit 5B [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_004141378.1	7.0e-194	77.20	THO complex subunit 5B [Cucumis sativus] >KGN55195.1 hypothetical protein Csa_01...	[more]
KAG6608471.1	2.0e-193	77.20	THO complex subunit 5B, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022940324.1	4.5e-193	76.99	THO complex subunit 5B [Cucurbita moschata]	[more]

BLAST of Sed0026470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4K4J0	3.4e-135	55.67	THO complex subunit 5B OS=Arabidopsis thaliana OX=3702 GN=THO5B PE=1 SV=1	[more]
F4HRC1	7.0e-112	50.11	THO complex subunit 5A OS=Arabidopsis thaliana OX=3702 GN=THO5A PE=1 SV=1	[more]
Q6NY52	1.8e-27	25.79	THO complex subunit 5 homolog OS=Danio rerio OX=7955 GN=thoc5 PE=2 SV=1	[more]
Q13769	3.1e-27	25.16	THO complex subunit 5 homolog OS=Homo sapiens OX=9606 GN=THOC5 PE=1 SV=2	[more]
A4IFQ0	2.6e-26	25.42	THO complex subunit 5 homolog OS=Bos taurus OX=9913 GN=THOC5 PE=2 SV=1	[more]

BLAST of Sed0026470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J206	4.0e-195	77.62	THO complex subunit 5B OS=Cucurbita maxima OX=3661 GN=LOC111481103 PE=3 SV=1	[more]
A0A0A0KZS2	3.4e-194	77.20	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639830 PE=3 SV=1	[more]
A0A6J1FJR5	2.2e-193	76.99	THO complex subunit 5B OS=Cucurbita moschata OX=3662 GN=LOC111445974 PE=3 SV=1	[more]
A0A5A7VBI1	8.3e-193	76.78	THO complex subunit 5B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2...	[more]
A0A1S3BTI6	8.3e-193	76.78	THO complex subunit 5B OS=Cucumis melo OX=3656 GN=LOC103493544 PE=3 SV=1	[more]

BLAST of Sed0026470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G42920.2	2.4e-136	55.67	THO complex, subunit 5	[more]
AT1G45233.2	4.9e-113	50.11	THO complex, subunit 5	[more]
AT5G42920.1	2.1e-103	54.40	THO complex, subunit 5	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 166..186
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 271..308
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
IPR019163	THO complex, subunit 5	PFAM	PF09766	FmiP_Thoc5	coord: 65..421 e-value: 1.7E-101 score: 340.1
IPR019163	THO complex, subunit 5	PANTHER	PTHR13375	FMS INTERACTING PROTEIN	coord: 13..474

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0026470.1	Sed0026470.1	mRNA
Sed0026470.2	Sed0026470.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006406	mRNA export from nucleus
biological_process	GO:0032786	positive regulation of DNA-templated transcription, elongation
cellular_component	GO:0000445	THO complex part of transcription export complex
molecular_function	GO:0003729	mRNA binding