Homology
BLAST of Sed0026453 vs. NCBI nr
Match:
XP_023517651.1 (KH domain-containing protein At4g18375-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1056.6 bits (2731), Expect = 8.4e-305
Identity = 551/626 (88.02%), Postives = 582/626 (92.97%), Query Frame = 0
Query: 1 MLSGKRPYGHRVNNGDSKGYKRRAPDREEWAGHGDELVAYRILCPAEVIGSVIGKSGKVI 60
M+SGKRPYG R NNGDSKGYKRR DR++W GDELV YRILCP EVIGSVIGKSGKVI
Sbjct: 1 MVSGKRPYGQRDNNGDSKGYKRRITDRDDWV--GDELVVYRILCPDEVIGSVIGKSGKVI 60
Query: 61 NSIRHETRAKIKVVDPFPGAKDRVLTIFCFVKDKEEVEVDDEFDDRRPLCAAQDALLKVH 120
NSIR ETRAKIKVVDPFPGAKDRV+TIFCFVKDKEEV+VDDEF DRRP+CAAQDALLKVH
Sbjct: 61 NSIRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEEVDVDDEFYDRRPVCAAQDALLKVH 120
Query: 121 AAIANAVASAGDLDKNQRDRELCQILIPASQSANVIGKAGSTIKKLRGKTRTSIKISPKD 180
AAIANA+ASAGDLDKNQRD+E CQIL+P+SQSANVIGKAGSTIKKLRGKTRTSIKISPKD
Sbjct: 121 AAIANALASAGDLDKNQRDKEQCQILVPSSQSANVIGKAGSTIKKLRGKTRTSIKISPKD 180
Query: 181 ATDPLHSCAMEFDNFATIAGEPEGVRLALFAISSIMYKFPPREEIPLDTSVNEA-PSIII 240
ATDP+HSCAMEFDNF IAGEPEGVR ALFAISSIMYKFPPREEIPLDT+VNEA PSIII
Sbjct: 181 ATDPIHSCAMEFDNFVMIAGEPEGVRRALFAISSIMYKFPPREEIPLDTTVNEAPPSIII 240
Query: 241 PSDVSLYST-GLYSSADPILSHRSIPPMLGAPQVQDLCDYPDTGNTWPLYTSALPVVSGI 300
PSDV LYS GLY SADPIL RSIPPMLG VQD+ DYPDTGNTWPLY+S+LPVVSGI
Sbjct: 241 PSDVPLYSAGGLYPSADPILPPRSIPPMLGGQHVQDIHDYPDTGNTWPLYSSSLPVVSGI 300
Query: 301 DGHPSSEELMVRVLCPFDNIGRVIGKGGGTIKSIRQATGARVEVDDSKRDCDECIITITS 360
GHP SEEL+VRVLCPFDNIGRVIGKGGGTIKSIRQA+G+RVEVDDSKRDCDEC+ITITS
Sbjct: 301 GGHPPSEELIVRVLCPFDNIGRVIGKGGGTIKSIRQASGSRVEVDDSKRDCDECLITITS 360
Query: 361 IESLDDLKSMVVETVLLLQEKINDDEGGTVVMRLLVPSKVIGCIIGKSGSIINEIRKTTR 420
IESLDDLKSM VETVLLLQEKINDDEGGTV+MRLLVPSKVIGCIIGKSGSIINEIRKTTR
Sbjct: 361 IESLDDLKSMAVETVLLLQEKINDDEGGTVIMRLLVPSKVIGCIIGKSGSIINEIRKTTR 420
Query: 421 ADIRISKGDKIKCTTDGDELVEVSGKVGSVRDALVQIVLRLRDDALKERDVGHNHAVGTD 480
ADIRISKGDKIKC + DELVEVSGKVGSVRDALVQIVLRLR++ALK+R+VG+N AV TD
Sbjct: 421 ADIRISKGDKIKCASANDELVEVSGKVGSVRDALVQIVLRLREEALKDREVGYNPAVCTD 480
Query: 481 SMYTSGSSFSMPSVLPSVSPGAPPMSYDRRADSGSGLGTYSSSSVYGYGSLSMGDNGYGS 540
SMY SGSSFSMPSVLPSVSPGAPPM YD+RA+SGSGLG SSSS+YGYGSLSMGDNGYGS
Sbjct: 481 SMYHSGSSFSMPSVLPSVSPGAPPMGYDQRAESGSGLGALSSSSLYGYGSLSMGDNGYGS 540
Query: 541 MSSYSSKMYGGLSPPSALEMLIPAHAAGKVIGKGGANIANIRKISGASIELSNSKGSRGD 600
MSSYSSKMYGGL PPSALEMLIPA AAGKVIGKGGANIANIRKISGA IE+S+S SRGD
Sbjct: 541 MSSYSSKMYGGLPPPSALEMLIPATAAGKVIGKGGANIANIRKISGALIEISDSNSSRGD 600
Query: 601 RIALISGTSEQKRTAENLIQAFIMAT 625
RIALISGTSEQKR AENLIQAFIMAT
Sbjct: 601 RIALISGTSEQKRAAENLIQAFIMAT 624
BLAST of Sed0026453 vs. NCBI nr
Match:
KAG7026457.1 (KH domain-containing protein [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1056.2 bits (2730), Expect = 1.1e-304
Identity = 551/626 (88.02%), Postives = 583/626 (93.13%), Query Frame = 0
Query: 1 MLSGKRPYGHRVNNGDSKGYKRRAPDREEWAGHGDELVAYRILCPAEVIGSVIGKSGKVI 60
M+SGKRPYG R NNGDSKGYKRR DR++W GDELV YRILCP EVIGSVIGKSGKVI
Sbjct: 1 MVSGKRPYGQRDNNGDSKGYKRRITDRDDWV--GDELVVYRILCPDEVIGSVIGKSGKVI 60
Query: 61 NSIRHETRAKIKVVDPFPGAKDRVLTIFCFVKDKEEVEVDDEFDDRRPLCAAQDALLKVH 120
NSIR ETRAKIKVVDPFPGAKDRV+TIFCFVKDKEEV+VDDEF DRRP+CAAQDALLKVH
Sbjct: 61 NSIRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEEVDVDDEFYDRRPVCAAQDALLKVH 120
Query: 121 AAIANAVASAGDLDKNQRDRELCQILIPASQSANVIGKAGSTIKKLRGKTRTSIKISPKD 180
AAIANA+ASAGDLDKNQRD+E CQIL+P+SQSANVIGKAGSTIKKLRGKTRTSIKISPKD
Sbjct: 121 AAIANALASAGDLDKNQRDKEQCQILVPSSQSANVIGKAGSTIKKLRGKTRTSIKISPKD 180
Query: 181 ATDPLHSCAMEFDNFATIAGEPEGVRLALFAISSIMYKFPPREEIPLDTSVNEA-PSIII 240
ATDP+HSCAMEFDNF IAGEPEGVR ALFAISSIMYKFPPREEIPLDT+VNEA PSIII
Sbjct: 181 ATDPIHSCAMEFDNFVMIAGEPEGVRRALFAISSIMYKFPPREEIPLDTTVNEAPPSIII 240
Query: 241 PSDVSLYST-GLYSSADPILSHRSIPPMLGAPQVQDLCDYPDTGNTWPLYTSALPVVSGI 300
PSDV LYS GLY SADPIL RSIPPMLGA VQD+ DYPDTGNTWPLY+S+LPVVSGI
Sbjct: 241 PSDVPLYSAGGLYPSADPILPPRSIPPMLGAQHVQDIHDYPDTGNTWPLYSSSLPVVSGI 300
Query: 301 DGHPSSEELMVRVLCPFDNIGRVIGKGGGTIKSIRQATGARVEVDDSKRDCDECIITITS 360
GHP SEEL+VRVLCPFDNIGRVIGKGGGTIKSIRQA+G+RVEVDDSKRDCDEC+ITITS
Sbjct: 301 GGHPPSEELIVRVLCPFDNIGRVIGKGGGTIKSIRQASGSRVEVDDSKRDCDECLITITS 360
Query: 361 IESLDDLKSMVVETVLLLQEKINDDEGGTVVMRLLVPSKVIGCIIGKSGSIINEIRKTTR 420
IESLDDLKSM VETVLLLQEKINDDEGGTV+MRLLVPSKVIGCIIGKSGSIINEIRKTTR
Sbjct: 361 IESLDDLKSMAVETVLLLQEKINDDEGGTVIMRLLVPSKVIGCIIGKSGSIINEIRKTTR 420
Query: 421 ADIRISKGDKIKCTTDGDELVEVSGKVGSVRDALVQIVLRLRDDALKERDVGHNHAVGTD 480
ADIRISKGDKIKC + DELVEVSGKVGSVRDALVQIVLRLR++ALK+R+VG+N AV TD
Sbjct: 421 ADIRISKGDKIKCASANDELVEVSGKVGSVRDALVQIVLRLREEALKDREVGYNPAVCTD 480
Query: 481 SMYTSGSSFSMPSVLPSVSPGAPPMSYDRRADSGSGLGTYSSSSVYGYGSLSMGDNGYGS 540
SMY SGSSFSMPSVLPSVSPGAPPM YD+RA+SGSGLG SSSS+YGYGSLSMGD+GYGS
Sbjct: 481 SMYHSGSSFSMPSVLPSVSPGAPPMGYDQRAESGSGLGALSSSSLYGYGSLSMGDSGYGS 540
Query: 541 MSSYSSKMYGGLSPPSALEMLIPAHAAGKVIGKGGANIANIRKISGASIELSNSKGSRGD 600
MSSYSSKMYGGL PPSALEMLIPA AAGKVIGKGGANIANIRKISGA IE+S+S SRGD
Sbjct: 541 MSSYSSKMYGGLPPPSALEMLIPATAAGKVIGKGGANIANIRKISGALIEISDSNSSRGD 600
Query: 601 RIALISGTSEQKRTAENLIQAFIMAT 625
RIALISGTSEQKR AENLIQAFIMAT
Sbjct: 601 RIALISGTSEQKRAAENLIQAFIMAT 624
BLAST of Sed0026453 vs. NCBI nr
Match:
XP_023003482.1 (KH domain-containing protein At4g18375-like [Cucurbita maxima])
HSP 1 Score: 1053.9 bits (2724), Expect = 5.4e-304
Identity = 550/626 (87.86%), Postives = 582/626 (92.97%), Query Frame = 0
Query: 1 MLSGKRPYGHRVNNGDSKGYKRRAPDREEWAGHGDELVAYRILCPAEVIGSVIGKSGKVI 60
M+SGKRPYG R N+GDSKGYKRR DR++W GDELV YRILCP EVIGSVIGKSGKVI
Sbjct: 1 MVSGKRPYGQRDNSGDSKGYKRRITDRDDWV--GDELVVYRILCPDEVIGSVIGKSGKVI 60
Query: 61 NSIRHETRAKIKVVDPFPGAKDRVLTIFCFVKDKEEVEVDDEFDDRRPLCAAQDALLKVH 120
NSIR ETRAKIKVVDPFPGAKDRV+TIFCFVKDKEEV+VDDEF DRRP+CAAQDALLKVH
Sbjct: 61 NSIRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEEVDVDDEFYDRRPVCAAQDALLKVH 120
Query: 121 AAIANAVASAGDLDKNQRDRELCQILIPASQSANVIGKAGSTIKKLRGKTRTSIKISPKD 180
AAIANA+ASAGDLDKNQRD+E CQIL+P+SQSANVIGKAGSTIKKLRGKTRTSIKISPKD
Sbjct: 121 AAIANALASAGDLDKNQRDKEQCQILVPSSQSANVIGKAGSTIKKLRGKTRTSIKISPKD 180
Query: 181 ATDPLHSCAMEFDNFATIAGEPEGVRLALFAISSIMYKFPPREEIPLDTSVNEA-PSIII 240
ATDP+HSCAMEFDNF IAGEPEGVR ALFAISSIMYKFPPREEIPLDT+VNEA PSIII
Sbjct: 181 ATDPIHSCAMEFDNFVMIAGEPEGVRRALFAISSIMYKFPPREEIPLDTTVNEAPPSIII 240
Query: 241 PSDVSLYST-GLYSSADPILSHRSIPPMLGAPQVQDLCDYPDTGNTWPLYTSALPVVSGI 300
PSDV LYS GLY SADPIL RSIPPMLGA VQD+ DYPDTGNTWPLY+S+LPVVSGI
Sbjct: 241 PSDVPLYSAGGLYPSADPILPPRSIPPMLGAQHVQDIQDYPDTGNTWPLYSSSLPVVSGI 300
Query: 301 DGHPSSEELMVRVLCPFDNIGRVIGKGGGTIKSIRQATGARVEVDDSKRDCDECIITITS 360
GHP SEEL+VRVLCPFDNIGRVIGKGGGTIKSIRQA+G+RVEVDDSKRDCDEC+ITITS
Sbjct: 301 GGHPPSEELIVRVLCPFDNIGRVIGKGGGTIKSIRQASGSRVEVDDSKRDCDECLITITS 360
Query: 361 IESLDDLKSMVVETVLLLQEKINDDEGGTVVMRLLVPSKVIGCIIGKSGSIINEIRKTTR 420
IESLDDLKSM VETVLLLQEKINDDEGGTV+MRLLVPSKVIGCIIGKSGSIINEIRKTTR
Sbjct: 361 IESLDDLKSMAVETVLLLQEKINDDEGGTVIMRLLVPSKVIGCIIGKSGSIINEIRKTTR 420
Query: 421 ADIRISKGDKIKCTTDGDELVEVSGKVGSVRDALVQIVLRLRDDALKERDVGHNHAVGTD 480
ADIRISKGDKIKC + DELVEVSGKVGSVRDALVQIVLRLR++ALK+R+VG+N AV TD
Sbjct: 421 ADIRISKGDKIKCASANDELVEVSGKVGSVRDALVQIVLRLREEALKDREVGYNPAVCTD 480
Query: 481 SMYTSGSSFSMPSVLPSVSPGAPPMSYDRRADSGSGLGTYSSSSVYGYGSLSMGDNGYGS 540
SMY SGSSFSMPSVLPSVSPGAPPM YD+RA+SGSGLG SSSS+YGYGSLSMGDNGYGS
Sbjct: 481 SMYHSGSSFSMPSVLPSVSPGAPPMGYDQRAESGSGLGALSSSSLYGYGSLSMGDNGYGS 540
Query: 541 MSSYSSKMYGGLSPPSALEMLIPAHAAGKVIGKGGANIANIRKISGASIELSNSKGSRGD 600
MSSY SKMYGGL PPSALEMLIPA AAGKVIGKGGANIANIRKISGA IE+S+S SRGD
Sbjct: 541 MSSYLSKMYGGLPPPSALEMLIPATAAGKVIGKGGANIANIRKISGALIEISDSNSSRGD 600
Query: 601 RIALISGTSEQKRTAENLIQAFIMAT 625
RIALISGTSEQKR AENLIQAFIMAT
Sbjct: 601 RIALISGTSEQKRAAENLIQAFIMAT 624
BLAST of Sed0026453 vs. NCBI nr
Match:
KAG6594458.1 (KH domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1053.5 bits (2723), Expect = 7.1e-304
Identity = 550/626 (87.86%), Postives = 581/626 (92.81%), Query Frame = 0
Query: 1 MLSGKRPYGHRVNNGDSKGYKRRAPDREEWAGHGDELVAYRILCPAEVIGSVIGKSGKVI 60
M+SGKRPYG R NNGDSKGYKRR DR++W GDELV YRILCP EVIGSVIGKSGKVI
Sbjct: 1 MVSGKRPYGQRDNNGDSKGYKRRITDRDDWV--GDELVVYRILCPDEVIGSVIGKSGKVI 60
Query: 61 NSIRHETRAKIKVVDPFPGAKDRVLTIFCFVKDKEEVEVDDEFDDRRPLCAAQDALLKVH 120
NSIR ETRAKIKVVDPFPGAKDRV+TIFCFVKDKEEV+VDDEF DRRP+CAAQDALLKVH
Sbjct: 61 NSIRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEEVDVDDEFYDRRPVCAAQDALLKVH 120
Query: 121 AAIANAVASAGDLDKNQRDRELCQILIPASQSANVIGKAGSTIKKLRGKTRTSIKISPKD 180
AAIANA+ASAGDLDKNQRD+E CQIL+P SQSANVIGKAGSTIKKLRGKTRTSIKISPKD
Sbjct: 121 AAIANALASAGDLDKNQRDKEQCQILVPLSQSANVIGKAGSTIKKLRGKTRTSIKISPKD 180
Query: 181 ATDPLHSCAMEFDNFATIAGEPEGVRLALFAISSIMYKFPPREEIPLDTSVNEAP-SIII 240
ATDP+HSCAMEFDNF IAGEPEGVR ALFAISSIMYKFPPREEIPLDT+VNEAP SIII
Sbjct: 181 ATDPIHSCAMEFDNFVMIAGEPEGVRRALFAISSIMYKFPPREEIPLDTTVNEAPSSIII 240
Query: 241 PSDVSLYST-GLYSSADPILSHRSIPPMLGAPQVQDLCDYPDTGNTWPLYTSALPVVSGI 300
PSDV LYS GLY SADPIL RSIPPMLGA VQD+ DYPDTGNTWPLY+S+LPVV GI
Sbjct: 241 PSDVPLYSAGGLYPSADPILPPRSIPPMLGAQHVQDIHDYPDTGNTWPLYSSSLPVVPGI 300
Query: 301 DGHPSSEELMVRVLCPFDNIGRVIGKGGGTIKSIRQATGARVEVDDSKRDCDECIITITS 360
GHP SEEL+VRVLCPFDNIGRVIGKGGGTIKSIRQA+G+RVEVDDSKRDCDEC+ITITS
Sbjct: 301 GGHPPSEELIVRVLCPFDNIGRVIGKGGGTIKSIRQASGSRVEVDDSKRDCDECLITITS 360
Query: 361 IESLDDLKSMVVETVLLLQEKINDDEGGTVVMRLLVPSKVIGCIIGKSGSIINEIRKTTR 420
IESLDDLKSM VETVLLLQEKINDDEGGTV+MRLLVPSKVIGCIIGKSGSIINEIRKTTR
Sbjct: 361 IESLDDLKSMAVETVLLLQEKINDDEGGTVIMRLLVPSKVIGCIIGKSGSIINEIRKTTR 420
Query: 421 ADIRISKGDKIKCTTDGDELVEVSGKVGSVRDALVQIVLRLRDDALKERDVGHNHAVGTD 480
ADIRISKGDKIKC + DELVEVSGKVGSVRDALVQIVLRLR++ALK+R+VG+N AV TD
Sbjct: 421 ADIRISKGDKIKCASANDELVEVSGKVGSVRDALVQIVLRLREEALKDREVGYNPAVCTD 480
Query: 481 SMYTSGSSFSMPSVLPSVSPGAPPMSYDRRADSGSGLGTYSSSSVYGYGSLSMGDNGYGS 540
SMY SGSSFSMPSVLPSVSPGAPPM YD+RA+SGSGLG SSSS+YGYGSLSMGD+GYGS
Sbjct: 481 SMYHSGSSFSMPSVLPSVSPGAPPMGYDQRAESGSGLGALSSSSLYGYGSLSMGDSGYGS 540
Query: 541 MSSYSSKMYGGLSPPSALEMLIPAHAAGKVIGKGGANIANIRKISGASIELSNSKGSRGD 600
MSSYSSKMYGGL PPSALEMLIPA AAGKVIGKGGANIANIRKISGA IE+S+S SRGD
Sbjct: 541 MSSYSSKMYGGLPPPSALEMLIPATAAGKVIGKGGANIANIRKISGALIEISDSNSSRGD 600
Query: 601 RIALISGTSEQKRTAENLIQAFIMAT 625
RIALISGTSEQKR AENLIQAFIMAT
Sbjct: 601 RIALISGTSEQKRAAENLIQAFIMAT 624
BLAST of Sed0026453 vs. NCBI nr
Match:
XP_022926572.1 (KH domain-containing protein At4g18375-like [Cucurbita moschata])
HSP 1 Score: 1048.9 bits (2711), Expect = 1.7e-302
Identity = 550/626 (87.86%), Postives = 581/626 (92.81%), Query Frame = 0
Query: 1 MLSGKRPYGHRVNNGDSKGYKRRAPDREEWAGHGDELVAYRILCPAEVIGSVIGKSGKVI 60
M+SGKRPYG R NNGDSKGYKRR DR++W GDELV YRILCP EVIGSVIGKSGKVI
Sbjct: 1 MVSGKRPYGQRDNNGDSKGYKRRITDRDDWV--GDELVVYRILCPDEVIGSVIGKSGKVI 60
Query: 61 NSIRHETRAKIKVVDPFPGAKDRVLTIFCFVKDKEEVEVDDEFDDRRPLCAAQDALLKVH 120
NSIR ETRAKIKVVDPFPGAKDRV+TIFCFVKDKEEV+VDDEF DRRP+CAAQDALLKVH
Sbjct: 61 NSIRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEEVDVDDEFYDRRPVCAAQDALLKVH 120
Query: 121 AAIANAVASAGDLDKNQRDRELCQILIPASQSANVIGKAGSTIKKLRGKTRTSIKISPKD 180
AAIANA+ASAGDLDKNQRD+E CQIL+P+SQSANVIGKAGSTIKKLRGKTRTSIKISPKD
Sbjct: 121 AAIANALASAGDLDKNQRDKEQCQILVPSSQSANVIGKAGSTIKKLRGKTRTSIKISPKD 180
Query: 181 ATDPLHSCAMEFDNFATIAGEPEGVRLALFAISSIMYKFPPREEIPLDTSVNEA-PSIII 240
ATDP+HSCAMEFDNF IAGEPEGVR ALFAISSIMYKFPPREEIPLDT+VNEA PSIII
Sbjct: 181 ATDPIHSCAMEFDNFVMIAGEPEGVRRALFAISSIMYKFPPREEIPLDTTVNEAPPSIII 240
Query: 241 PSDVSLYST-GLYSSADPILSHRSIPPMLGAPQVQDLCDYPDTGNTWPLYTSALPVVSGI 300
PSDV LYS GLY SADPIL RSIPPMLGA VQD+ DYPDTGNTWPLY S+LPVVSGI
Sbjct: 241 PSDVPLYSAGGLYPSADPILPPRSIPPMLGAQHVQDIHDYPDTGNTWPLY-SSLPVVSGI 300
Query: 301 DGHPSSEELMVRVLCPFDNIGRVIGKGGGTIKSIRQATGARVEVDDSKRDCDECIITITS 360
GHP SEEL+VRVLCP DNIGRVIGKGGGTIKSIRQA+G+RVEVDDSKRDCDEC+ITITS
Sbjct: 301 GGHPPSEELIVRVLCPLDNIGRVIGKGGGTIKSIRQASGSRVEVDDSKRDCDECLITITS 360
Query: 361 IESLDDLKSMVVETVLLLQEKINDDEGGTVVMRLLVPSKVIGCIIGKSGSIINEIRKTTR 420
IESLDDLKSM VETVLLLQEKINDDEGGTV+MRLLVPSKVIGCIIGKSGSIINEIRKTTR
Sbjct: 361 IESLDDLKSMAVETVLLLQEKINDDEGGTVIMRLLVPSKVIGCIIGKSGSIINEIRKTTR 420
Query: 421 ADIRISKGDKIKCTTDGDELVEVSGKVGSVRDALVQIVLRLRDDALKERDVGHNHAVGTD 480
ADIRISKGDKIKC + DELVEVSGKVGSVRDALVQIVLRLR++ALK+R+VG+N AV TD
Sbjct: 421 ADIRISKGDKIKCASANDELVEVSGKVGSVRDALVQIVLRLREEALKDREVGYNPAVCTD 480
Query: 481 SMYTSGSSFSMPSVLPSVSPGAPPMSYDRRADSGSGLGTYSSSSVYGYGSLSMGDNGYGS 540
SMY SGSSFSMPSVLPSVSPGAPPM YD+RA+SGSGLG SSSS+YGYGSLSMGD+GYGS
Sbjct: 481 SMYHSGSSFSMPSVLPSVSPGAPPMGYDQRAESGSGLGALSSSSLYGYGSLSMGDSGYGS 540
Query: 541 MSSYSSKMYGGLSPPSALEMLIPAHAAGKVIGKGGANIANIRKISGASIELSNSKGSRGD 600
MSSYSSKMYGGL PPSALEMLIPA AAGKVIGKGGANIANIRKISGA IE+S+S SRGD
Sbjct: 541 MSSYSSKMYGGLPPPSALEMLIPATAAGKVIGKGGANIANIRKISGALIEISDSNSSRGD 600
Query: 601 RIALISGTSEQKRTAENLIQAFIMAT 625
RIALISGTSEQKR AENLIQAFIMAT
Sbjct: 601 RIALISGTSEQKRAAENLIQAFIMAT 623
BLAST of Sed0026453 vs. ExPASy Swiss-Prot
Match:
P58223 (KH domain-containing protein At4g18375 OS=Arabidopsis thaliana OX=3702 GN=At4g18375 PE=2 SV=1)
HSP 1 Score: 545.8 bits (1405), Expect = 6.3e-154
Identity = 329/641 (51.33%), Postives = 421/641 (65.68%), Query Frame = 0
Query: 5 KRPYGHRVNNGDSKGYKRRAPDREEWAGHGDELVAYRILCPAEVIGSVIGKSGKVINSIR 64
KR R N+ ++ KRR + + DELV YRILCP +V+G VIGKSGKVIN+IR
Sbjct: 6 KRKQIQRNNSESNRNQKRRISHDKI---NRDELVVYRILCPIDVVGGVIGKSGKVINAIR 65
Query: 65 HETRAKIKVVDPFPGAKDRVLTIFCFVKDKEEVEVDDEFDDRRPLCAAQDALLKVHAAIA 124
H T+AKIKV D G RV+TI+C VK+K+E E+ + PLC AQDALLKV+ AI
Sbjct: 66 HNTKAKIKVFDQLHGCSQRVITIYCSVKEKQE-EIGFTKSENEPLCCAQDALLKVYDAIV 125
Query: 125 NAVASAGDLDKNQR------DRELCQILIPASQSANVIGKAGSTIKKLRGKTRTSIKISP 184
A D + N + D + C++L+P SQS+++IGKAG IK++R +TR S+K+
Sbjct: 126 -----ASDEENNTKTNVDRDDNKECRLLVPFSQSSSLIGKAGENIKRIRRRTRASVKVVS 185
Query: 185 KDATDPLHSCAMEFDNFATIAGEPEGVRLALFAISSIMYKFPPREEIPLDTSVNEAP--S 244
KD +DP H CAME+DN I+GEPE V+ ALFA+S+IMYK PRE IPLD++ + P S
Sbjct: 186 KDVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIMYKINPRENIPLDSTSQDVPAAS 245
Query: 245 IIIPSDV--SLY-STGLYSSADPILSH-RSIPPMLGAPQVQDLCDYPDT-GNTWPLYTSA 304
+I+PSD+ S+Y TG YS+ D IL +P A V D Y +T N P++ S+
Sbjct: 246 VIVPSDLSNSVYPQTGFYSNQDHILQQGAGVPSYFNALSVSDFQGYAETAANPVPVFASS 305
Query: 305 LPVVSGIDGHPSSEELMVRVLCPFDNIGRVIGKGGGTIKSIRQATGARVEVDDSKRDC-- 364
LPV G G SEEL+ +VLCP NI RVIGKGG TIK IR+A+G+ +EV+DS+ C
Sbjct: 306 LPVTHGFGGSSRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGD 365
Query: 365 DECIITITSIESLDDLKSMVVETVLLLQEKINDDEGGTVVMRLLVPSKVIGCIIGKSGSI 424
DEC+I +T+ ES DD+KSM VE VLLLQE IND++ V M+LLV SKVIGC+IGKSGS+
Sbjct: 366 DECVIIVTATESPDDMKSMAVEAVLLLQEYINDEDAENVKMQLLVSSKVIGCVIGKSGSV 425
Query: 425 INEIRKTTRADIRISKGDKIKCTTDGDELVEVSGKVGSVRDALVQIVLRLRDDALKERD- 484
INEIRK T A+I ISKG K D+LVEVSG+V SVRDAL+QIVLRLR+D L ++D
Sbjct: 426 INEIRKRTNANICISKGKK-------DDLVEVSGEVSSVRDALIQIVLRLREDVLGDKDS 485
Query: 485 -VGHNHAVGTDS-MYTSGSS---FSMPSVLPSVSPGAPPMSYDRRADSGSGLGTYSSSSV 544
TD+ + SGSS +++PS + S++ S+S
Sbjct: 486 VATRKPPARTDNCSFLSGSSNAGYTLPSFMSSMA---------------------STSGF 545
Query: 545 YGYGSLSMGDNGYGSMSSYSSKMYGGLSPPSALEMLIPAHAAGKVIGKGGANIANIRKIS 604
+GYGS GDN GS YS YG L SALE+LIPAHA KV+GKGG N+ NIR+IS
Sbjct: 546 HGYGSFPAGDNVLGSTGPYS---YGRLPSSSALEILIPAHAMSKVMGKGGGNLENIRRIS 605
Query: 605 GASIELSNSKGSRGDRIALISGTSEQKRTAENLIQAFIMAT 625
GA IE+S SK S GD IAL+SGT EQ R AENL+QAF+M+T
Sbjct: 606 GAMIEISASKTSHGDHIALLSGTLEQMRCAENLVQAFVMST 606
BLAST of Sed0026453 vs. ExPASy Swiss-Prot
Match:
Q8W4B1 (RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana OX=3702 GN=RCF3 PE=1 SV=1)
HSP 1 Score: 170.2 bits (430), Expect = 7.2e-41
Identity = 168/607 (27.68%), Postives = 278/607 (45.80%), Query Frame = 0
Query: 40 YRILCPAEVIGSVIGKSGKVINSIRHETRAKIKVVDPFPGAKDRVLTIFCFVKDKEEVEV 99
YRILC G VIGKSG +I SIR T A I V + PG +R++ I D +
Sbjct: 70 YRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEI----SDNRRRDP 129
Query: 100 DDEFDDRRPLCAAQDALLKVHAAIANAVAS---AGDLDKNQRD---------RELCQILI 159
D P AQ+AL VH I + A G + + D R + ++++
Sbjct: 130 DGRMPSFSP---AQEALFSVHDRILESEAQFGYGGPPPEEEEDYGGVRPGGGRVVTRLVV 189
Query: 160 PASQSANVIGKAGSTIKKLRGKTRTSIKISPKDATDPLHSCAMEFDNFATIAGEPEGVRL 219
++GK G I+++R +T+T I+I P+++ P C + I GE V+
Sbjct: 190 SRMHVGCLLGKGGKIIEQMRIETKTHIRILPRESNLP--RCVSLSEEIVQIVGELNAVKN 249
Query: 220 ALFAISSIMYKFPPREEIPLDTSVNEAPSIIIPSDVSLYSTGLYSSADPILSHRSIPPML 279
AL +SS + + R+ + +P + Y L + +
Sbjct: 250 ALAIVSSRLRESQHRDRSNFQ-GRSHSPERSFAAAGDDYMPQLRRQSSDRFPRGNFRNN- 309
Query: 280 GAPQVQDLCDYPDTGNTWPLYTSALPVVSGIDGHPSSEELMVRVLCPFDNIGRVIGKGGG 339
++ + + A+PV + SEEL+ ++LCP D I RV+G+ G
Sbjct: 310 ---------NFSSRQSNYAEEAPAVPVGENV----YSEELVFQILCPADKIVRVVGESQG 369
Query: 340 TIKSIRQATGARVEVDDSKRDCDECIITITSIESLDDLKSMVVETVLLLQEKIND---DE 399
I ++ G V V D DE IITI+S E+ DD E +L +Q +I D D+
Sbjct: 370 IIDLLQNEIGVDVRVSDPVAGSDEQIITISSEEAPDDPFFPAQEALLHIQTQIIDLIPDK 429
Query: 400 GGTVVMRLLVPSKVIGCIIGKSGSIINEIRKTTRADIRISKGDKI-KCTTDGDELVEVSG 459
+ RLLVPS+ C+ GK+GS ++EI + T ++I ++I +C + D +++++G
Sbjct: 430 DNLITTRLLVPSRDSICLEGKAGS-VSEISRLTGTSVQILAREEIPRCASINDVVIQITG 489
Query: 460 KVGSVRDALVQIVLRLRDDALKERDVGHNHAVGTDSMYTSGSSFSMPSVLPSVSPGAPPM 519
++ + R+ALV++ L LR KE T T+G + V+ S
Sbjct: 490 EIRAAREALVELTLLLRSHMFKELSQKETPPASTS---TTGPLEGVAGVMEVASSNNTIQ 549
Query: 520 SYDRRADSGSGLGTYSSSSVY-----GYGSLS-MGDNGY-GSMSSYSSKMYGGLSPPSAL 579
S R + S L S++ G+GS++ G++ + + +S+M L S L
Sbjct: 550 S--REGPTSSNLNLQQVSTILPQFKEGFGSVAKAGESEHREEVPVTTSRMAVPLVTRSTL 609
Query: 580 EMLIPAHAAGKVIGKGGANIANIRKISGASIELSNSKGSRGDRIALISGTSEQKRTAENL 624
E+++P K++ K +A I + SGAS+ + + I ISGT EQ A++L
Sbjct: 610 EVVLPEAVVPKLVTKSRNKLAQISEWSGASVTIVEDRPEETQNIIRISGTPEQAERAQSL 646
BLAST of Sed0026453 vs. ExPASy Swiss-Prot
Match:
F4KDN0 (KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 SV=1)
HSP 1 Score: 126.3 bits (316), Expect = 1.2e-27
Identity = 108/396 (27.27%), Postives = 193/396 (48.74%), Query Frame = 0
Query: 304 SEELMVRVLCPFDNIGRVIGKGGGTIKSIRQATGARVEVDDSKRDCDECIITITSIESLD 363
+++++ ++LC +N G VIG GG ++ + TGA + V ++ DC+E +I +T+ E+ +
Sbjct: 449 NQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENPE 508
Query: 364 DLKSMVVETVLLLQEKIND-------DEG--GTVVMRLLVPSKVIGCIIGKSGSIINEIR 423
S + ++L+ ++ + D G ++ RL+VP+ IGC++GK G I++E+R
Sbjct: 509 CQSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKGGVIVSEMR 568
Query: 424 KTTRADIRISKGDK-IKCTTDGDELVEVSGKVGSVRDALVQIVLRLRD----DALKERDV 483
KTT A I+I K ++ KC ++ D++V+++G+ +VR+A+ I RLRD +++K
Sbjct: 569 KTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVFSNSMKNSLA 628
Query: 484 GHNHAVGTDSMY--TSGSSFSMPSVLPSVSPGAPPMSYDRRADSGSGLGTYSS------- 543
+ A+ T+ Y S + S+ S +P S RR++ G++SS
Sbjct: 629 KSSSALTTERFYDRQSDNPLSIGSHQSVSNPATNSSSLHRRSEDSFLSGSHSSVNYSRSV 688
Query: 544 ------------------SSVYGYG-----SLSMGDNGYGSMSSYS-------------- 603
S+ Y + ++ DN + + S
Sbjct: 689 GTDPYIRPEDPFPDRFNPSAGYSHNFGRRFTMDHSDNSHHLTEAPSRLWASPPPAAPRGL 748
Query: 604 SKMYGGLSPPSA-----------------LEMLIPAHAAGKVIGKGGANIANIRKISGAS 623
S GGLS A +E+ +PA+A V G+ G N+ +R+ISGA
Sbjct: 749 SDASGGLSSARAGHVLGSGHKSAIVTNTTVEIRVPANAMSFVYGEQGYNLEQLRQISGAR 808
BLAST of Sed0026453 vs. ExPASy Swiss-Prot
Match:
Q9SR13 (Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV=1)
HSP 1 Score: 96.3 bits (238), Expect = 1.3e-18
Identity = 93/359 (25.91%), Postives = 154/359 (42.90%), Query Frame = 0
Query: 26 DREEWAGHGDELVAYRILCPAEVIGSVIGKSGKVINSIRHETRAKIKVVDPFPGAKDRVL 85
+ + W G E V +R+L PA+ +GS+IG+ G VI I ETRA+IK++D PG +R +
Sbjct: 176 EEKRWPGWPGETV-FRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAV 235
Query: 86 TIFCFVKDKEEVEVDDEFDDRRPLCAAQDALLKVHAAIANAVASAGDLDKNQRDRELCQI 145
V KEE E L + D LL+VH I + + + ++
Sbjct: 236 ----MVSGKEEPE--------SSLPPSMDGLLRVHMRIVDGLDGEAS-QAPPPSKVSTRL 295
Query: 146 LIPASQSANVIGKAGSTIKKLRGKTRTSIKISPKDATDPLHSCAMEFDNFATIAGEPEGV 205
L+PASQ+ ++IGK G T+K ++ + +++ ++ L A++ D + GEP V
Sbjct: 296 LVPASQAGSLIGKQGGTVKAIQEASACIVRVL---GSEDLPVFALQDDRVVEVVGEPTSV 355
Query: 206 RLALFAISSIMYKF-PPREEIPLDTSVNEAPSIIIPSDVSLYSTGLYSSADPILSH---- 265
AL I+S + KF R IP + + P+ + + + S P H
Sbjct: 356 HRALELIASHLRKFLVDRSIIPFFENQMQKPTRQMD-----HMPPPHQSWGPPQGHAPSV 415
Query: 266 ------RSIPPMLGAPQVQDLCDYPDTGNTWPLYTSALPVVSG------IDGHPSSEELM 325
+ PP + P D P P+ +S ++ H SS M
Sbjct: 416 GGGGYGHNPPPYMQPPPRHDSYYPPPEMRQPPMEKQPHQGISAYGREPPMNVHVSSAPPM 475
Query: 326 V------RVLCPFDNIGRVIGKGGGTIKSIRQATGARVEVDDSKRDCDECIITITSIES 362
V ++ P VIG G I R+ +GA V + +++ E + ++ S
Sbjct: 476 VAQQVTQQMQIPLSYADAVIGTSGSNISYTRRLSGATVTIQETRGVPGEMTVEVSGTGS 512
HSP 2 Score: 73.2 bits (178), Expect = 1.2e-11
Identity = 92/343 (26.82%), Postives = 145/343 (42.27%), Query Frame = 0
Query: 306 ELMVRVLCPFDNIGRVIGKGGGTIKSIRQATGARVEVDDSKRDCDECIITITSIESLDDL 365
E + R+L P +G +IG+ G IK I + T AR+++ D E + ++ E +
Sbjct: 186 ETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESS 245
Query: 366 KSMVVETVLLLQEKINDDEGG---------TVVMRLLVPSKVIGCIIGKSGSIINEIRKT 425
++ +L + +I D G V RLLVP+ G +IGK G + I++
Sbjct: 246 LPPSMDGLLRVHMRIVDGLDGEASQAPPPSKVSTRLLVPASQAGSLIGKQGGTVKAIQEA 305
Query: 426 TRADIRISKGDKIKC-TTDGDELVEVSGKVGSVRDALVQIVLRLRDDALKERDV------ 485
+ +R+ + + D +VEV G+ SV AL I LR L +R +
Sbjct: 306 SACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLR-KFLVDRSIIPFFEN 365
Query: 486 -GHNHAVGTDSMYTSGSSFSMP-SVLPSVSPGA------PPMSYDRRADSGSGLGTYSSS 545
D M S+ P PSV G P M R DS
Sbjct: 366 QMQKPTRQMDHMPPPHQSWGPPQGHAPSVGGGGYGHNPPPYMQPPPRHDSYYPPPEMRQP 425
Query: 546 SVYGYGSLSMGDNGYG---SMSSYSSKMYGGLSPPSALEMLIPAHAAGKVIGKGGANIAN 605
+ G + YG M+ + S ++ +M IP A VIG G+NI+
Sbjct: 426 PM--EKQPHQGISAYGREPPMNVHVSSAPPMVAQQVTQQMQIPLSYADAVIGTSGSNISY 485
Query: 606 IRKISGASIELSNSKGSRGDRIALISGTSEQKRTAENLIQAFI 622
R++SGA++ + ++G G+ +SGT Q +TA LIQ F+
Sbjct: 486 TRRLSGATVTIQETRGVPGEMTVEVSGTGSQVQTAVQLIQNFM 525
BLAST of Sed0026453 vs. ExPASy Swiss-Prot
Match:
Q0VCU0 (Poly(rC)-binding protein 4 OS=Bos taurus OX=9913 GN=PCBP4 PE=2 SV=1)
HSP 1 Score: 88.6 bits (218), Expect = 2.7e-16
Identity = 100/339 (29.50%), Postives = 162/339 (47.79%), Query Frame = 0
Query: 296 SGIDGHPS-SEELMVRVLCPFDNIGRVIGKGGGTIKSIRQATGARVEVDDSKRDCDECII 355
+G++ P S L +R+L +G +IGK G T+K IR+ + AR+ + S+ C E I
Sbjct: 6 AGLEEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITI--SEGSCPERIT 65
Query: 356 TITSIESLDDLKSMVVETVLLLQEKINDD------EGGT-----VVMRLLVPSKVIGCII 415
TIT + V V ++ K+++D GG V +RL++P+ G +I
Sbjct: 66 TITG------STAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLI 125
Query: 416 GKSGSIINEIRKTTRADIRISKGDKIKCTTDGDELVEVSGKVGSVRDALVQIVLRLRDDA 475
GK+G+ I EIR+TT A ++++ GD + +T + V VSG V DA++ V ++
Sbjct: 126 GKAGTKIKEIRETTGAQVQVA-GDLLPNST--ERAVTVSG----VPDAIILCVRQICAVI 185
Query: 476 LKERDVGHNHAVGTDSMYTSGSSFSMPSVLPSVSPGAPPMSYDRRADSGSGLGTYSSSSV 535
L+ G + PS+S G +S ++ GT + + V
Sbjct: 186 LESPPKG-----------------ATIPYHPSLSLGTVLLSTNQGFSVQGQYGTVTPAEV 245
Query: 536 YGYGSLSMGDNGYGSMSSYSSKMYGGLSP---PSALEMLIPAHAAGKVIGKGGANIANIR 595
LS G+ ++ S M GL P S+ E L+P G VIG+ G+ I+ IR
Sbjct: 246 TKLQQLS----GH-AVPFASPSMVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIR 305
Query: 596 KISGASIELSNSKGSRGDRIALISGTSEQKRTAENLIQA 620
++SGA I++ N G+R I+G+ A+ LI A
Sbjct: 306 QMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITA 307
BLAST of Sed0026453 vs. ExPASy TrEMBL
Match:
A0A6J1KMN7 (KH domain-containing protein At4g18375-like OS=Cucurbita maxima OX=3661 GN=LOC111497084 PE=4 SV=1)
HSP 1 Score: 1053.9 bits (2724), Expect = 2.6e-304
Identity = 550/626 (87.86%), Postives = 582/626 (92.97%), Query Frame = 0
Query: 1 MLSGKRPYGHRVNNGDSKGYKRRAPDREEWAGHGDELVAYRILCPAEVIGSVIGKSGKVI 60
M+SGKRPYG R N+GDSKGYKRR DR++W GDELV YRILCP EVIGSVIGKSGKVI
Sbjct: 1 MVSGKRPYGQRDNSGDSKGYKRRITDRDDWV--GDELVVYRILCPDEVIGSVIGKSGKVI 60
Query: 61 NSIRHETRAKIKVVDPFPGAKDRVLTIFCFVKDKEEVEVDDEFDDRRPLCAAQDALLKVH 120
NSIR ETRAKIKVVDPFPGAKDRV+TIFCFVKDKEEV+VDDEF DRRP+CAAQDALLKVH
Sbjct: 61 NSIRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEEVDVDDEFYDRRPVCAAQDALLKVH 120
Query: 121 AAIANAVASAGDLDKNQRDRELCQILIPASQSANVIGKAGSTIKKLRGKTRTSIKISPKD 180
AAIANA+ASAGDLDKNQRD+E CQIL+P+SQSANVIGKAGSTIKKLRGKTRTSIKISPKD
Sbjct: 121 AAIANALASAGDLDKNQRDKEQCQILVPSSQSANVIGKAGSTIKKLRGKTRTSIKISPKD 180
Query: 181 ATDPLHSCAMEFDNFATIAGEPEGVRLALFAISSIMYKFPPREEIPLDTSVNEA-PSIII 240
ATDP+HSCAMEFDNF IAGEPEGVR ALFAISSIMYKFPPREEIPLDT+VNEA PSIII
Sbjct: 181 ATDPIHSCAMEFDNFVMIAGEPEGVRRALFAISSIMYKFPPREEIPLDTTVNEAPPSIII 240
Query: 241 PSDVSLYST-GLYSSADPILSHRSIPPMLGAPQVQDLCDYPDTGNTWPLYTSALPVVSGI 300
PSDV LYS GLY SADPIL RSIPPMLGA VQD+ DYPDTGNTWPLY+S+LPVVSGI
Sbjct: 241 PSDVPLYSAGGLYPSADPILPPRSIPPMLGAQHVQDIQDYPDTGNTWPLYSSSLPVVSGI 300
Query: 301 DGHPSSEELMVRVLCPFDNIGRVIGKGGGTIKSIRQATGARVEVDDSKRDCDECIITITS 360
GHP SEEL+VRVLCPFDNIGRVIGKGGGTIKSIRQA+G+RVEVDDSKRDCDEC+ITITS
Sbjct: 301 GGHPPSEELIVRVLCPFDNIGRVIGKGGGTIKSIRQASGSRVEVDDSKRDCDECLITITS 360
Query: 361 IESLDDLKSMVVETVLLLQEKINDDEGGTVVMRLLVPSKVIGCIIGKSGSIINEIRKTTR 420
IESLDDLKSM VETVLLLQEKINDDEGGTV+MRLLVPSKVIGCIIGKSGSIINEIRKTTR
Sbjct: 361 IESLDDLKSMAVETVLLLQEKINDDEGGTVIMRLLVPSKVIGCIIGKSGSIINEIRKTTR 420
Query: 421 ADIRISKGDKIKCTTDGDELVEVSGKVGSVRDALVQIVLRLRDDALKERDVGHNHAVGTD 480
ADIRISKGDKIKC + DELVEVSGKVGSVRDALVQIVLRLR++ALK+R+VG+N AV TD
Sbjct: 421 ADIRISKGDKIKCASANDELVEVSGKVGSVRDALVQIVLRLREEALKDREVGYNPAVCTD 480
Query: 481 SMYTSGSSFSMPSVLPSVSPGAPPMSYDRRADSGSGLGTYSSSSVYGYGSLSMGDNGYGS 540
SMY SGSSFSMPSVLPSVSPGAPPM YD+RA+SGSGLG SSSS+YGYGSLSMGDNGYGS
Sbjct: 481 SMYHSGSSFSMPSVLPSVSPGAPPMGYDQRAESGSGLGALSSSSLYGYGSLSMGDNGYGS 540
Query: 541 MSSYSSKMYGGLSPPSALEMLIPAHAAGKVIGKGGANIANIRKISGASIELSNSKGSRGD 600
MSSY SKMYGGL PPSALEMLIPA AAGKVIGKGGANIANIRKISGA IE+S+S SRGD
Sbjct: 541 MSSYLSKMYGGLPPPSALEMLIPATAAGKVIGKGGANIANIRKISGALIEISDSNSSRGD 600
Query: 601 RIALISGTSEQKRTAENLIQAFIMAT 625
RIALISGTSEQKR AENLIQAFIMAT
Sbjct: 601 RIALISGTSEQKRAAENLIQAFIMAT 624
BLAST of Sed0026453 vs. ExPASy TrEMBL
Match:
A0A6J1EER2 (KH domain-containing protein At4g18375-like OS=Cucurbita moschata OX=3662 GN=LOC111433674 PE=4 SV=1)
HSP 1 Score: 1048.9 bits (2711), Expect = 8.4e-303
Identity = 550/626 (87.86%), Postives = 581/626 (92.81%), Query Frame = 0
Query: 1 MLSGKRPYGHRVNNGDSKGYKRRAPDREEWAGHGDELVAYRILCPAEVIGSVIGKSGKVI 60
M+SGKRPYG R NNGDSKGYKRR DR++W GDELV YRILCP EVIGSVIGKSGKVI
Sbjct: 1 MVSGKRPYGQRDNNGDSKGYKRRITDRDDWV--GDELVVYRILCPDEVIGSVIGKSGKVI 60
Query: 61 NSIRHETRAKIKVVDPFPGAKDRVLTIFCFVKDKEEVEVDDEFDDRRPLCAAQDALLKVH 120
NSIR ETRAKIKVVDPFPGAKDRV+TIFCFVKDKEEV+VDDEF DRRP+CAAQDALLKVH
Sbjct: 61 NSIRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEEVDVDDEFYDRRPVCAAQDALLKVH 120
Query: 121 AAIANAVASAGDLDKNQRDRELCQILIPASQSANVIGKAGSTIKKLRGKTRTSIKISPKD 180
AAIANA+ASAGDLDKNQRD+E CQIL+P+SQSANVIGKAGSTIKKLRGKTRTSIKISPKD
Sbjct: 121 AAIANALASAGDLDKNQRDKEQCQILVPSSQSANVIGKAGSTIKKLRGKTRTSIKISPKD 180
Query: 181 ATDPLHSCAMEFDNFATIAGEPEGVRLALFAISSIMYKFPPREEIPLDTSVNEA-PSIII 240
ATDP+HSCAMEFDNF IAGEPEGVR ALFAISSIMYKFPPREEIPLDT+VNEA PSIII
Sbjct: 181 ATDPIHSCAMEFDNFVMIAGEPEGVRRALFAISSIMYKFPPREEIPLDTTVNEAPPSIII 240
Query: 241 PSDVSLYST-GLYSSADPILSHRSIPPMLGAPQVQDLCDYPDTGNTWPLYTSALPVVSGI 300
PSDV LYS GLY SADPIL RSIPPMLGA VQD+ DYPDTGNTWPLY S+LPVVSGI
Sbjct: 241 PSDVPLYSAGGLYPSADPILPPRSIPPMLGAQHVQDIHDYPDTGNTWPLY-SSLPVVSGI 300
Query: 301 DGHPSSEELMVRVLCPFDNIGRVIGKGGGTIKSIRQATGARVEVDDSKRDCDECIITITS 360
GHP SEEL+VRVLCP DNIGRVIGKGGGTIKSIRQA+G+RVEVDDSKRDCDEC+ITITS
Sbjct: 301 GGHPPSEELIVRVLCPLDNIGRVIGKGGGTIKSIRQASGSRVEVDDSKRDCDECLITITS 360
Query: 361 IESLDDLKSMVVETVLLLQEKINDDEGGTVVMRLLVPSKVIGCIIGKSGSIINEIRKTTR 420
IESLDDLKSM VETVLLLQEKINDDEGGTV+MRLLVPSKVIGCIIGKSGSIINEIRKTTR
Sbjct: 361 IESLDDLKSMAVETVLLLQEKINDDEGGTVIMRLLVPSKVIGCIIGKSGSIINEIRKTTR 420
Query: 421 ADIRISKGDKIKCTTDGDELVEVSGKVGSVRDALVQIVLRLRDDALKERDVGHNHAVGTD 480
ADIRISKGDKIKC + DELVEVSGKVGSVRDALVQIVLRLR++ALK+R+VG+N AV TD
Sbjct: 421 ADIRISKGDKIKCASANDELVEVSGKVGSVRDALVQIVLRLREEALKDREVGYNPAVCTD 480
Query: 481 SMYTSGSSFSMPSVLPSVSPGAPPMSYDRRADSGSGLGTYSSSSVYGYGSLSMGDNGYGS 540
SMY SGSSFSMPSVLPSVSPGAPPM YD+RA+SGSGLG SSSS+YGYGSLSMGD+GYGS
Sbjct: 481 SMYHSGSSFSMPSVLPSVSPGAPPMGYDQRAESGSGLGALSSSSLYGYGSLSMGDSGYGS 540
Query: 541 MSSYSSKMYGGLSPPSALEMLIPAHAAGKVIGKGGANIANIRKISGASIELSNSKGSRGD 600
MSSYSSKMYGGL PPSALEMLIPA AAGKVIGKGGANIANIRKISGA IE+S+S SRGD
Sbjct: 541 MSSYSSKMYGGLPPPSALEMLIPATAAGKVIGKGGANIANIRKISGALIEISDSNSSRGD 600
Query: 601 RIALISGTSEQKRTAENLIQAFIMAT 625
RIALISGTSEQKR AENLIQAFIMAT
Sbjct: 601 RIALISGTSEQKRAAENLIQAFIMAT 623
BLAST of Sed0026453 vs. ExPASy TrEMBL
Match:
A0A6J1CYK2 (KH domain-containing protein At4g18375-like OS=Momordica charantia OX=3673 GN=LOC111015766 PE=4 SV=1)
HSP 1 Score: 1035.8 bits (2677), Expect = 7.4e-299
Identity = 541/626 (86.42%), Postives = 576/626 (92.01%), Query Frame = 0
Query: 1 MLSGKRPYGHRVNNGDSKGYKRRAPDREEWAGHGDELVAYRILCPAEVIGSVIGKSGKVI 60
M+ GKRPYGHR NNGD+K +KRR D+++W DELV YRILCP EVIGSVIGKSGKVI
Sbjct: 1 MVIGKRPYGHRDNNGDNKSHKRRMSDKDDWV--SDELVVYRILCPDEVIGSVIGKSGKVI 60
Query: 61 NSIRHETRAKIKVVDPFPGAKDRVLTIFCFVKDKEEVEVDDEFDDRRPLCAAQDALLKVH 120
NSIR ETRAKIKVVDPFPGAKDRV+TIF FVKDKEEVE+DDEF+DR PLCAAQDALLKVH
Sbjct: 61 NSIRQETRAKIKVVDPFPGAKDRVITIFSFVKDKEEVEIDDEFNDREPLCAAQDALLKVH 120
Query: 121 AAIANAVASAGDLDKNQRDRELCQILIPASQSANVIGKAGSTIKKLRGKTRTSIKISPKD 180
AAIANAVASAGDLD Q+D+E CQIL+P+SQSANVIGKAGSTIKKLR KTRTSIKIS KD
Sbjct: 121 AAIANAVASAGDLDMKQKDKEQCQILVPSSQSANVIGKAGSTIKKLRSKTRTSIKISAKD 180
Query: 181 ATDPLHSCAMEFDNFATIAGEPEGVRLALFAISSIMYKFPPREEIPLDTSVNEA-PSIII 240
ATDP+HSCAMEFDNF ++GEPEGVR ALFAISSIMYKFPPREEIPLDT+VNEA PSIII
Sbjct: 181 ATDPIHSCAMEFDNFVVLSGEPEGVRWALFAISSIMYKFPPREEIPLDTNVNEAPPSIII 240
Query: 241 PSDVSLYST-GLYSSADPILSHRSIPPMLGAPQVQDLCDYPDTGNTWPLYTSALPVVSGI 300
PSDV LYS GLY SADPIL RSIPPMLG P VQDL DY DTGNTWPLY+SALPVVSGI
Sbjct: 241 PSDVPLYSAGGLYPSADPILPPRSIPPMLGPPHVQDLHDYSDTGNTWPLYSSALPVVSGI 300
Query: 301 DGHPSSEELMVRVLCPFDNIGRVIGKGGGTIKSIRQATGARVEVDDSKRDCDECIITITS 360
G P SEEL+VRVLCPFDNIGRVIGKGGGTIKSIRQA+GARVEVDDSKRDCDEC+ITITS
Sbjct: 301 GGQPPSEELVVRVLCPFDNIGRVIGKGGGTIKSIRQASGARVEVDDSKRDCDECLITITS 360
Query: 361 IESLDDLKSMVVETVLLLQEKINDDEGGTVVMRLLVPSKVIGCIIGKSGSIINEIRKTTR 420
ESLDDLKSM VETVLLLQEKINDDEGGTV+MRLLVPSKVIGCIIGKSGSII+EIRKTTR
Sbjct: 361 FESLDDLKSMAVETVLLLQEKINDDEGGTVIMRLLVPSKVIGCIIGKSGSIIHEIRKTTR 420
Query: 421 ADIRISKGDKIKCTTDGDELVEVSGKVGSVRDALVQIVLRLRDDALKERDVGHNHAVGTD 480
ADIRISKGDKIKC DELVE+SGKVGSVRDALVQIVLRLRDDALKERDVGHN VGTD
Sbjct: 421 ADIRISKGDKIKCAAANDELVELSGKVGSVRDALVQIVLRLRDDALKERDVGHNPGVGTD 480
Query: 481 SMYTSGSSFSMPSVLPSVSPGAPPMSYDRRADSGSGLGTYSSSSVYGYGSLSMGDNGYGS 540
SMYTSGS+FSMPSVLPSVSPGA P+ YD+RA+SGSGLG SSSS+YGYGSLSMGDNGYGS
Sbjct: 481 SMYTSGSNFSMPSVLPSVSPGA-PIGYDQRAESGSGLGVLSSSSLYGYGSLSMGDNGYGS 540
Query: 541 MSSYSSKMYGGLSPPSALEMLIPAHAAGKVIGKGGANIANIRKISGASIELSNSKGSRGD 600
+SSYSSK+YGGL PPSALEMLIPA+AAGKVIGKGGANIANIRKISGASIE+S+S+ SRGD
Sbjct: 541 ISSYSSKLYGGLPPPSALEMLIPANAAGKVIGKGGANIANIRKISGASIEISDSRSSRGD 600
Query: 601 RIALISGTSEQKRTAENLIQAFIMAT 625
RIALISGTSEQKRTAENLIQAFIMAT
Sbjct: 601 RIALISGTSEQKRTAENLIQAFIMAT 623
BLAST of Sed0026453 vs. ExPASy TrEMBL
Match:
A0A1S3AZT7 (KH domain-containing protein At4g18375-like OS=Cucumis melo OX=3656 GN=LOC103484357 PE=4 SV=1)
HSP 1 Score: 1031.6 bits (2666), Expect = 1.4e-297
Identity = 537/627 (85.65%), Postives = 577/627 (92.03%), Query Frame = 0
Query: 1 MLSGKRPYGHRVNNGDSKGYKRRAPDREEWAGHGDELVAYRILCPAEVIGSVIGKSGKVI 60
M+SGKRPYG R NGD+KGYKRR ++++W DELV YRILCP EVIGSVIGKSGKVI
Sbjct: 1 MVSGKRPYGQRDYNGDNKGYKRRITEQDDWV--SDELVVYRILCPDEVIGSVIGKSGKVI 60
Query: 61 NSIRHETRAKIKVVDPFPGAKDRVLTIFCFVKDKEEVEVDDEFDDRRPLCAAQDALLKVH 120
NSIR ETRAKIKVVDPFPGAKDRV+TIFCFVKDKE+VEVDDEF+DR+ LCAAQDALLKVH
Sbjct: 61 NSIRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEDVEVDDEFNDRQTLCAAQDALLKVH 120
Query: 121 AAIANAVASAGDLDKNQRDRELCQILIPASQSANVIGKAGSTIKKLRGKTRTSIKISPKD 180
AAIANA+ASAGDLD+ QRD+E CQILIP+SQSANVIGKAGSTIKKLR KTRTSIKISPKD
Sbjct: 121 AAIANALASAGDLDRKQRDKEQCQILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKD 180
Query: 181 ATDPLHSCAMEFDNFATIAGEPEGVRLALFAISSIMYKFPPREEIPLDTSVNEA-PSIII 240
ATDP+HSCAMEFDNFA I+GEPEGVR ALFAISSIMYKFPPREEIPLDT+V+EA P+III
Sbjct: 181 ATDPIHSCAMEFDNFAVISGEPEGVRRALFAISSIMYKFPPREEIPLDTNVSEAPPNIII 240
Query: 241 PSDVSLYST-GLYSSADPILSHRSIPPMLGAPQVQDLCDYPDTGNTWPLYTSALPVV-SG 300
PSDV LYS GLY SADPIL RSIPPMLGA VQDL DYPD+GN WPLY+SALPVV G
Sbjct: 241 PSDVPLYSAGGLYPSADPILPPRSIPPMLGAQHVQDLHDYPDSGNAWPLYSSALPVVPGG 300
Query: 301 IDGHPSSEELMVRVLCPFDNIGRVIGKGGGTIKSIRQATGARVEVDDSKRDCDECIITIT 360
I GHP SEEL+VRVLCPFDNIGRVIGKGGGTIKSIRQA+GARVEVDD+KRDCDECIITI+
Sbjct: 301 ISGHPPSEELVVRVLCPFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIITIS 360
Query: 361 SIESLDDLKSMVVETVLLLQEKINDDEGGTVVMRLLVPSKVIGCIIGKSGSIINEIRKTT 420
S ESLDDLKSM VETVLLLQEKINDDEGG V+MRLL+PSKVIGCIIGKSGSIINEIRK+T
Sbjct: 361 SFESLDDLKSMAVETVLLLQEKINDDEGGMVIMRLLIPSKVIGCIIGKSGSIINEIRKST 420
Query: 421 RADIRISKGDKIKCTTDGDELVEVSGKVGSVRDALVQIVLRLRDDALKERDVGHNHAVGT 480
RADIRISKGDK+KC + DELVEV+GKVG VRDALVQIVLRLRDDALKERDVGHN A+ T
Sbjct: 421 RADIRISKGDKLKCASSSDELVEVTGKVGCVRDALVQIVLRLRDDALKERDVGHNSAIVT 480
Query: 481 DSMYTSGSSFSMPSVLPSVSPGAPPMSYDRRADSGSGLGTYSSSSVYGYGSLSMGDNGYG 540
DSMYTSGSSFSMPSVLPSVSPGAPPM YD+RA+SGSGL SSS +YGYGSLSMGDNGYG
Sbjct: 481 DSMYTSGSSFSMPSVLPSVSPGAPPMGYDQRAESGSGLSVLSSSGLYGYGSLSMGDNGYG 540
Query: 541 SMSSYSSKMYGGLSPPSALEMLIPAHAAGKVIGKGGANIANIRKISGASIELSNSKGSRG 600
SMSSYSSK+YGGL PPS+LEMLIPA+AAGKVIGKGGANIANIRKISGA IE+S+SK SRG
Sbjct: 541 SMSSYSSKLYGGLPPPSSLEMLIPANAAGKVIGKGGANIANIRKISGALIEISDSKSSRG 600
Query: 601 DRIALISGTSEQKRTAENLIQAFIMAT 625
DRIALISGTSEQKRTAENLIQAFIMAT
Sbjct: 601 DRIALISGTSEQKRTAENLIQAFIMAT 625
BLAST of Sed0026453 vs. ExPASy TrEMBL
Match:
A0A5D3CPJ5 (KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009130 PE=4 SV=1)
HSP 1 Score: 1031.6 bits (2666), Expect = 1.4e-297
Identity = 537/627 (85.65%), Postives = 577/627 (92.03%), Query Frame = 0
Query: 1 MLSGKRPYGHRVNNGDSKGYKRRAPDREEWAGHGDELVAYRILCPAEVIGSVIGKSGKVI 60
M+SGKRPYG R NGD+KGYKRR ++++W DELV YRILCP EVIGSVIGKSGKVI
Sbjct: 1 MVSGKRPYGQRDYNGDNKGYKRRITEQDDWV--SDELVVYRILCPDEVIGSVIGKSGKVI 60
Query: 61 NSIRHETRAKIKVVDPFPGAKDRVLTIFCFVKDKEEVEVDDEFDDRRPLCAAQDALLKVH 120
NSIR ETRAKIKVVDPFPGAKDRV+TIFCFVKDKE+VEVDDEF+DR+ LCAAQDALLKVH
Sbjct: 61 NSIRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEDVEVDDEFNDRQTLCAAQDALLKVH 120
Query: 121 AAIANAVASAGDLDKNQRDRELCQILIPASQSANVIGKAGSTIKKLRGKTRTSIKISPKD 180
AAIANA+ASAGDLD+ QRD+E CQILIP+SQSANVIGKAGSTIKKLR KTRTSIKISPKD
Sbjct: 121 AAIANALASAGDLDRKQRDKEQCQILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKD 180
Query: 181 ATDPLHSCAMEFDNFATIAGEPEGVRLALFAISSIMYKFPPREEIPLDTSVNEA-PSIII 240
ATDP+HSCAMEFDNFA I+GEPEGVR ALFAISSIMYKFPPREEIPLDT+V+EA P+III
Sbjct: 181 ATDPIHSCAMEFDNFAVISGEPEGVRRALFAISSIMYKFPPREEIPLDTNVSEAPPNIII 240
Query: 241 PSDVSLYST-GLYSSADPILSHRSIPPMLGAPQVQDLCDYPDTGNTWPLYTSALPVV-SG 300
PSDV LYS GLY SADPIL RSIPPMLGA VQDL DYPD+GN WPLY+SALPVV G
Sbjct: 241 PSDVPLYSAGGLYPSADPILPPRSIPPMLGAQHVQDLHDYPDSGNAWPLYSSALPVVPGG 300
Query: 301 IDGHPSSEELMVRVLCPFDNIGRVIGKGGGTIKSIRQATGARVEVDDSKRDCDECIITIT 360
I GHP SEEL+VRVLCPFDNIGRVIGKGGGTIKSIRQA+GARVEVDD+KRDCDECIITI+
Sbjct: 301 ISGHPPSEELVVRVLCPFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIITIS 360
Query: 361 SIESLDDLKSMVVETVLLLQEKINDDEGGTVVMRLLVPSKVIGCIIGKSGSIINEIRKTT 420
S ESLDDLKSM VETVLLLQEKINDDEGG V+MRLL+PSKVIGCIIGKSGSIINEIRK+T
Sbjct: 361 SFESLDDLKSMAVETVLLLQEKINDDEGGMVIMRLLIPSKVIGCIIGKSGSIINEIRKST 420
Query: 421 RADIRISKGDKIKCTTDGDELVEVSGKVGSVRDALVQIVLRLRDDALKERDVGHNHAVGT 480
RADIRISKGDK+KC + DELVEV+GKVG VRDALVQIVLRLRDDALKERDVGHN A+ T
Sbjct: 421 RADIRISKGDKLKCASSSDELVEVTGKVGCVRDALVQIVLRLRDDALKERDVGHNSAIVT 480
Query: 481 DSMYTSGSSFSMPSVLPSVSPGAPPMSYDRRADSGSGLGTYSSSSVYGYGSLSMGDNGYG 540
DSMYTSGSSFSMPSVLPSVSPGAPPM YD+RA+SGSGL SSS +YGYGSLSMGDNGYG
Sbjct: 481 DSMYTSGSSFSMPSVLPSVSPGAPPMGYDQRAESGSGLSVLSSSGLYGYGSLSMGDNGYG 540
Query: 541 SMSSYSSKMYGGLSPPSALEMLIPAHAAGKVIGKGGANIANIRKISGASIELSNSKGSRG 600
SMSSYSSK+YGGL PPS+LEMLIPA+AAGKVIGKGGANIANIRKISGA IE+S+SK SRG
Sbjct: 541 SMSSYSSKLYGGLPPPSSLEMLIPANAAGKVIGKGGANIANIRKISGALIEISDSKSSRG 600
Query: 601 DRIALISGTSEQKRTAENLIQAFIMAT 625
DRIALISGTSEQKRTAENLIQAFIMAT
Sbjct: 601 DRIALISGTSEQKRTAENLIQAFIMAT 625
BLAST of Sed0026453 vs. TAIR 10
Match:
AT5G46190.1 (RNA-binding KH domain-containing protein )
HSP 1 Score: 595.9 bits (1535), Expect = 3.8e-170
Identity = 348/645 (53.95%), Postives = 456/645 (70.70%), Query Frame = 0
Query: 4 GKRPYGH-RVNNGDSKGYKRR----APDREEWAGHGDELVAYRILCPAEVIGSVIGKSGK 63
GKR + R NN D+ +RR + ++ D +V YRILCP+ V+GSVIGKSGK
Sbjct: 5 GKRTHNRFRDNNNDNNRNQRRRLSYESEEKKIDNKDDLVVVYRILCPSGVMGSVIGKSGK 64
Query: 64 VINSIRHETRAKIKVVDPFPGAKDRVLTIFCFVKDKEE-VEVD-DEFDDRRPLCAAQDAL 123
VIN IR ETRA+IKVVDPFPG +RV+TIFC V +K++ V+++ E D PLC+AQ AL
Sbjct: 65 VINLIRQETRARIKVVDPFPGCSERVITIFCSVSEKKDIVDIEYSELDYSVPLCSAQAAL 124
Query: 124 LKVHAAIANAVASAGDLDKNQRD--RELCQILIPASQSANVIGKAGSTIKKLRGKTRTSI 183
LKVH AI ++A+A + K RD RE C++L+P+SQ + VIGK+GS IK +RG+TR ++
Sbjct: 125 LKVHDAIVASLATAAENTKIDRDDFRE-CRLLVPSSQCSIVIGKSGSIIKNIRGRTRANV 184
Query: 184 KISPKDATDPLHSCAMEFDNFATIAGEPEGVRLALFAISSIMYKFPPREEIPLDTSVNEA 243
K+ KD +DP H+CAM+FDN I+GE E V+ ALFA+S+IMYK PRE+IPLDT+V E
Sbjct: 185 KVVSKDVSDPSHTCAMDFDNIVMISGETESVKKALFAVSAIMYKVSPREQIPLDTTVQEV 244
Query: 244 P-SIIIPSDVSLY-STGLYSSADPILSH-RSIPPMLGA-PQVQDLCDYPDTGNTWPLYT- 303
P SIIIPSD+S+Y GLY S D I H ++ +G PQ + N P+++
Sbjct: 245 PASIIIPSDLSIYPQAGLYPSQDSIFQHGANVSSFIGTLPQGYG----ENAANPVPVFSA 304
Query: 304 SALPVVSGIDGHPSSEELMVRVLCPFDNIGRVIGKGGGTIKSIRQATGARVEVDDSKRD- 363
SALPVV G G SE+L ++V+C IGRVIGKGG TIK IRQA+G+ +EV+DS+ +
Sbjct: 305 SALPVVHGFGGSSRSEKLAIKVICSSSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNH 364
Query: 364 CDECIITITSIESLDDLKSMVVETVLLLQEKINDDEGGTVVMRLLVPSKVIGCIIGKSGS 423
D+C+IT+T+ ES DDLKSM VE VLLLQEKIND++ V M+LLV SKVIGCIIGKSGS
Sbjct: 365 DDDCVITVTATESPDDLKSMAVEAVLLLQEKINDEDEDKVKMQLLVSSKVIGCIIGKSGS 424
Query: 424 IINEIRKTTRADIRISKGDKI-KCTTDGDELVEVSGKVGSVRDALVQIVLRLRDDALKER 483
II+EIRK T+ADI ISKG+ KC DELVE+SG+V +VRDAL+QIVLRLRDD L++R
Sbjct: 425 IISEIRKRTKADIHISKGNNTPKCADPNDELVEISGEVSNVRDALIQIVLRLRDDVLRDR 484
Query: 484 DVGHNH----AVGTDSMYTSGSS---FSMPSVLPSVSPGAPPMSYDRRADSGSGLGTY-S 543
+ G + ++ ++S SS ++P S P + ++RR ++GS + S
Sbjct: 485 ETGSRNQPPARSENNNFFSSSSSNTGLALPQSFMSSVPQVASVDFNRRPETGSSMSMLPS 544
Query: 544 SSSVYGYGSLSMGDNGYGSMSSYSSKMYGGLSPPSALEMLIPAHAAGKVIGKGGANIANI 603
S +YGYGS +G+ YGS SSYSS +YGGL + +E+ IPA+A GKV+G+GG N+ NI
Sbjct: 545 SGGIYGYGSFPVGNTSYGSNSSYSSNLYGGLPQSTTMEVRIPANAVGKVMGRGGGNLDNI 604
Query: 604 RKISGASIELSNSKGSRGDRIALISGTSEQKRTAENLIQAFIMAT 625
R+ISGA IE+S+SK S G R+ALISGTSEQKRTAENL QAFIM+T
Sbjct: 605 RRISGAMIEISDSKNSHGGRVALISGTSEQKRTAENLFQAFIMST 644
BLAST of Sed0026453 vs. TAIR 10
Match:
AT4G18375.2 (RNA-binding KH domain-containing protein )
HSP 1 Score: 545.8 bits (1405), Expect = 4.5e-155
Identity = 329/641 (51.33%), Postives = 421/641 (65.68%), Query Frame = 0
Query: 5 KRPYGHRVNNGDSKGYKRRAPDREEWAGHGDELVAYRILCPAEVIGSVIGKSGKVINSIR 64
KR R N+ ++ KRR + + DELV YRILCP +V+G VIGKSGKVIN+IR
Sbjct: 6 KRKQIQRNNSESNRNQKRRISHDKI---NRDELVVYRILCPIDVVGGVIGKSGKVINAIR 65
Query: 65 HETRAKIKVVDPFPGAKDRVLTIFCFVKDKEEVEVDDEFDDRRPLCAAQDALLKVHAAIA 124
H T+AKIKV D G RV+TI+C VK+K+E E+ + PLC AQDALLKV+ AI
Sbjct: 66 HNTKAKIKVFDQLHGCSQRVITIYCSVKEKQE-EIGFTKSENEPLCCAQDALLKVYDAIV 125
Query: 125 NAVASAGDLDKNQR------DRELCQILIPASQSANVIGKAGSTIKKLRGKTRTSIKISP 184
A D + N + D + C++L+P SQS+++IGKAG IK++R +TR S+K+
Sbjct: 126 -----ASDEENNTKTNVDRDDNKECRLLVPFSQSSSLIGKAGENIKRIRRRTRASVKVVS 185
Query: 185 KDATDPLHSCAMEFDNFATIAGEPEGVRLALFAISSIMYKFPPREEIPLDTSVNEAP--S 244
KD +DP H CAME+DN I+GEPE V+ ALFA+S+IMYK PRE IPLD++ + P S
Sbjct: 186 KDVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIMYKINPRENIPLDSTSQDVPAAS 245
Query: 245 IIIPSDV--SLY-STGLYSSADPILSH-RSIPPMLGAPQVQDLCDYPDT-GNTWPLYTSA 304
+I+PSD+ S+Y TG YS+ D IL +P A V D Y +T N P++ S+
Sbjct: 246 VIVPSDLSNSVYPQTGFYSNQDHILQQGAGVPSYFNALSVSDFQGYAETAANPVPVFASS 305
Query: 305 LPVVSGIDGHPSSEELMVRVLCPFDNIGRVIGKGGGTIKSIRQATGARVEVDDSKRDC-- 364
LPV G G SEEL+ +VLCP NI RVIGKGG TIK IR+A+G+ +EV+DS+ C
Sbjct: 306 LPVTHGFGGSSRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGD 365
Query: 365 DECIITITSIESLDDLKSMVVETVLLLQEKINDDEGGTVVMRLLVPSKVIGCIIGKSGSI 424
DEC+I +T+ ES DD+KSM VE VLLLQE IND++ V M+LLV SKVIGC+IGKSGS+
Sbjct: 366 DECVIIVTATESPDDMKSMAVEAVLLLQEYINDEDAENVKMQLLVSSKVIGCVIGKSGSV 425
Query: 425 INEIRKTTRADIRISKGDKIKCTTDGDELVEVSGKVGSVRDALVQIVLRLRDDALKERD- 484
INEIRK T A+I ISKG K D+LVEVSG+V SVRDAL+QIVLRLR+D L ++D
Sbjct: 426 INEIRKRTNANICISKGKK-------DDLVEVSGEVSSVRDALIQIVLRLREDVLGDKDS 485
Query: 485 -VGHNHAVGTDS-MYTSGSS---FSMPSVLPSVSPGAPPMSYDRRADSGSGLGTYSSSSV 544
TD+ + SGSS +++PS + S++ S+S
Sbjct: 486 VATRKPPARTDNCSFLSGSSNAGYTLPSFMSSMA---------------------STSGF 545
Query: 545 YGYGSLSMGDNGYGSMSSYSSKMYGGLSPPSALEMLIPAHAAGKVIGKGGANIANIRKIS 604
+GYGS GDN GS YS YG L SALE+LIPAHA KV+GKGG N+ NIR+IS
Sbjct: 546 HGYGSFPAGDNVLGSTGPYS---YGRLPSSSALEILIPAHAMSKVMGKGGGNLENIRRIS 605
Query: 605 GASIELSNSKGSRGDRIALISGTSEQKRTAENLIQAFIMAT 625
GA IE+S SK S GD IAL+SGT EQ R AENL+QAF+M+T
Sbjct: 606 GAMIEISASKTSHGDHIALLSGTLEQMRCAENLVQAFVMST 606
BLAST of Sed0026453 vs. TAIR 10
Match:
AT4G18375.1 (RNA-binding KH domain-containing protein )
HSP 1 Score: 455.3 bits (1170), Expect = 7.9e-128
Identity = 276/560 (49.29%), Postives = 359/560 (64.11%), Query Frame = 0
Query: 5 KRPYGHRVNNGDSKGYKRRAPDREEWAGHGDELVAYRILCPAEVIGSVIGKSGKVINSIR 64
KR R N+ ++ KRR + + DELV YRILCP +V+G VIGKSGKVIN+IR
Sbjct: 6 KRKQIQRNNSESNRNQKRRISHDKI---NRDELVVYRILCPIDVVGGVIGKSGKVINAIR 65
Query: 65 HETRAKIKVVDPFPGAKDRVLTIFCFVKDKEEVEVDDEFDDRRPLCAAQDALLKVHAAIA 124
H T+AKIKV D G RV+TI+C VK+K+E E+ + PLC AQDALLKV+ AI
Sbjct: 66 HNTKAKIKVFDQLHGCSQRVITIYCSVKEKQE-EIGFTKSENEPLCCAQDALLKVYDAIV 125
Query: 125 NAVASAGDLDKNQR------DRELCQILIPASQSANVIGKAGSTIKKLRGKTRTSIKISP 184
A D + N + D + C++L+P SQS+++IGKAG IK++R +TR S+K+
Sbjct: 126 -----ASDEENNTKTNVDRDDNKECRLLVPFSQSSSLIGKAGENIKRIRRRTRASVKVVS 185
Query: 185 KDATDPLHSCAMEFDNFATIAGEPEGVRLALFAISSIMYKFPPREEIPLDTSVNEAP--S 244
KD +DP H CAME+DN I+GEPE V+ ALFA+S+IMYK PRE IPLD++ + P S
Sbjct: 186 KDVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIMYKINPRENIPLDSTSQDVPAAS 245
Query: 245 IIIPSDV--SLY-STGLYSSADPILSH-RSIPPMLGAPQVQDLCDYPDT-GNTWPLYTSA 304
+I+PSD+ S+Y TG YS+ D IL +P A V D Y +T N P++ S+
Sbjct: 246 VIVPSDLSNSVYPQTGFYSNQDHILQQGAGVPSYFNALSVSDFQGYAETAANPVPVFASS 305
Query: 305 LPVVSGIDGHPSSEELMVRVLCPFDNIGRVIGKGGGTIKSIRQATGARVEVDDSKRDC-- 364
LPV G G SEEL+ +VLCP NI RVIGKGG TIK IR+A+G+ +EV+DS+ C
Sbjct: 306 LPVTHGFGGSSRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGD 365
Query: 365 DECIITITSIESLDDLKSMVVETVLLLQEKINDDEGGTVVMRLLVPSKVIGCIIGKSGSI 424
DEC+I +T+ ES DD+KSM VE VLLLQE IND++ V M+LLV SKVIGC+IGKSGS+
Sbjct: 366 DECVIIVTATESPDDMKSMAVEAVLLLQEYINDEDAENVKMQLLVSSKVIGCVIGKSGSV 425
Query: 425 INEIRKTTRADIRISKGDKIKCTTDGDELVEVSGKVGSVRDALVQIVLRLRDDALKERD- 484
INEIRK T A+I ISKG K D+LVEVSG+V SVRDAL+QIVLRLR+D L ++D
Sbjct: 426 INEIRKRTNANICISKGKK-------DDLVEVSGEVSSVRDALIQIVLRLREDVLGDKDS 485
Query: 485 -VGHNHAVGTDS-MYTSGSS---FSMPSVLPSVSPGAPPMSYDRRADSGSGLGTYSSSSV 544
TD+ + SGSS +++PS + S++ S+S
Sbjct: 486 VATRKPPARTDNCSFLSGSSNAGYTLPSFMSSMA---------------------STSGF 528
BLAST of Sed0026453 vs. TAIR 10
Match:
AT5G15270.2 (RNA-binding KH domain-containing protein )
HSP 1 Score: 221.9 bits (564), Expect = 1.5e-57
Identity = 182/575 (31.65%), Postives = 288/575 (50.09%), Query Frame = 0
Query: 6 RPYGHRVNNGDSKGYKRRAPDREEWAGHGDELVAYRILCPAEVIGSVIGKSGKVINSIRH 65
RP +NG SK + R DR+ D+ V +R LCP + IGSVIG+ G ++ +R+
Sbjct: 20 RPQSDYDDNGGSK-RRYRGDDRDSLVIDRDDTV-FRYLCPVKKIGSVIGRGGDIVKQLRN 79
Query: 66 ETRAKIKVVDPFPGAKDRVLTIFCFVKDKEEVEVDDEFDDRRPLCAAQDALLKVHAAIAN 125
+TR+KI++ + PG +RV+TI+ E + D + L AQDAL ++H +
Sbjct: 80 DTRSKIRIGEAIPGCDERVITIY-----SPSDETNAFGDGEKVLSPAQDALFRIHDRVVA 139
Query: 126 AVASAGDLDKNQRDRELCQILIPASQSANVIGKAGSTIKKLRGKTRTSIKISPKDATDPL 185
A + D + ++ + ++L+P+ Q ++G+ G ++ +R +T I+I KD PL
Sbjct: 140 DDARSEDSPEGEK-QVTAKLLVPSDQIGCILGRGGQIVQNIRSETGAQIRI-VKDRNMPL 199
Query: 186 HSCAMEFDNFATIAGEPEGVRLALFAISSIMYKFPPREEIPLDTSVNEAPSIIIPSDVSL 245
CA+ D I+GE V+ AL I+S +++ P R S L
Sbjct: 200 --CALNSDELIQISGEVLIVKKALLQIASRLHENPSR------------------SQNLL 259
Query: 246 YSTGLYSSADPILSHRSIPPMLGAPQVQDLCDYPDTGNTWPLYTSALPVVSGIDGHPSSE 305
S+G Y A ++SH P ++G + + Y W + P+ P +
Sbjct: 260 SSSGGY-PAGSLMSHAGGPRLVGLAPL--MGSYGRDAGDW-----SRPLYQPPRNDPPAT 319
Query: 306 ELMVRVLCPFDNIGRVIGKGGGTIKSIRQATGARVEVDDSKRDCDECIITITSIESLDDL 365
E +R++ P +NI VIGKGG I +RQ T A ++VD S+ + ++C+ITI++ E +D
Sbjct: 320 EFFIRLVSPVENIASVIGKGGALINQLRQETRATIKVDSSRTEGNDCLITISAREVFEDA 379
Query: 366 KSMVVETVLLLQEKINDD---EGGTV--VMRLLVPSKVIGCIIGKSGSIINEIRKTTRAD 425
S +E V+ LQ K +D + G V RLLVPS IGCI+GK G+II E+R+ T+A+
Sbjct: 380 YSPTIEAVMRLQPKCSDKVERDSGLVSFTTRLLVPSSRIGCILGKGGAIITEMRRMTKAN 439
Query: 426 IRI-SKGDKIKCTTDGDELVEVSGKVGSVRDALVQIVLRLRDDALKERDVGHNHAVGTDS 485
IRI K + K +D DE+V++SG++ ++AL+QI RLR +
Sbjct: 440 IRILGKENLPKVASDDDEMVQISGELDVAKEALIQITSRLRANVFDR------------- 499
Query: 486 MYTSGSSFSMPSVLPSVSPGAPP----MSYD----RRADSGSGL-GTYSSSSVYGYGSLS 545
G+ ++ VLP V P AP YD RR + G+ G Y SS V G
Sbjct: 500 ---EGAVSALMPVLPYV-PVAPDAGDRFDYDSRDSRRLERGNPYPGGYGSSGVSAEGYSP 539
Query: 546 MGDNGYGSMSSYSSKMYGGLSPPSALEMLIPAHAA 566
G G SS +YGG + + + +H++
Sbjct: 560 YG-APVGGSSSTPYGVYGGYASGRSSSSGLSSHSS 539
BLAST of Sed0026453 vs. TAIR 10
Match:
AT5G15270.1 (RNA-binding KH domain-containing protein )
HSP 1 Score: 221.9 bits (564), Expect = 1.5e-57
Identity = 182/575 (31.65%), Postives = 288/575 (50.09%), Query Frame = 0
Query: 6 RPYGHRVNNGDSKGYKRRAPDREEWAGHGDELVAYRILCPAEVIGSVIGKSGKVINSIRH 65
RP +NG SK + R DR+ D+ V +R LCP + IGSVIG+ G ++ +R+
Sbjct: 20 RPQSDYDDNGGSK-RRYRGDDRDSLVIDRDDTV-FRYLCPVKKIGSVIGRGGDIVKQLRN 79
Query: 66 ETRAKIKVVDPFPGAKDRVLTIFCFVKDKEEVEVDDEFDDRRPLCAAQDALLKVHAAIAN 125
+TR+KI++ + PG +RV+TI+ E + D + L AQDAL ++H +
Sbjct: 80 DTRSKIRIGEAIPGCDERVITIY-----SPSDETNAFGDGEKVLSPAQDALFRIHDRVVA 139
Query: 126 AVASAGDLDKNQRDRELCQILIPASQSANVIGKAGSTIKKLRGKTRTSIKISPKDATDPL 185
A + D + ++ + ++L+P+ Q ++G+ G ++ +R +T I+I KD PL
Sbjct: 140 DDARSEDSPEGEK-QVTAKLLVPSDQIGCILGRGGQIVQNIRSETGAQIRI-VKDRNMPL 199
Query: 186 HSCAMEFDNFATIAGEPEGVRLALFAISSIMYKFPPREEIPLDTSVNEAPSIIIPSDVSL 245
CA+ D I+GE V+ AL I+S +++ P R S L
Sbjct: 200 --CALNSDELIQISGEVLIVKKALLQIASRLHENPSR------------------SQNLL 259
Query: 246 YSTGLYSSADPILSHRSIPPMLGAPQVQDLCDYPDTGNTWPLYTSALPVVSGIDGHPSSE 305
S+G Y A ++SH P ++G + + Y W + P+ P +
Sbjct: 260 SSSGGY-PAGSLMSHAGGPRLVGLAPL--MGSYGRDAGDW-----SRPLYQPPRNDPPAT 319
Query: 306 ELMVRVLCPFDNIGRVIGKGGGTIKSIRQATGARVEVDDSKRDCDECIITITSIESLDDL 365
E +R++ P +NI VIGKGG I +RQ T A ++VD S+ + ++C+ITI++ E +D
Sbjct: 320 EFFIRLVSPVENIASVIGKGGALINQLRQETRATIKVDSSRTEGNDCLITISAREVFEDA 379
Query: 366 KSMVVETVLLLQEKINDD---EGGTV--VMRLLVPSKVIGCIIGKSGSIINEIRKTTRAD 425
S +E V+ LQ K +D + G V RLLVPS IGCI+GK G+II E+R+ T+A+
Sbjct: 380 YSPTIEAVMRLQPKCSDKVERDSGLVSFTTRLLVPSSRIGCILGKGGAIITEMRRMTKAN 439
Query: 426 IRI-SKGDKIKCTTDGDELVEVSGKVGSVRDALVQIVLRLRDDALKERDVGHNHAVGTDS 485
IRI K + K +D DE+V++SG++ ++AL+QI RLR +
Sbjct: 440 IRILGKENLPKVASDDDEMVQISGELDVAKEALIQITSRLRANVFDR------------- 499
Query: 486 MYTSGSSFSMPSVLPSVSPGAPP----MSYD----RRADSGSGL-GTYSSSSVYGYGSLS 545
G+ ++ VLP V P AP YD RR + G+ G Y SS V G
Sbjct: 500 ---EGAVSALMPVLPYV-PVAPDAGDRFDYDSRDSRRLERGNPYPGGYGSSGVSAEGYSP 539
Query: 546 MGDNGYGSMSSYSSKMYGGLSPPSALEMLIPAHAA 566
G G SS +YGG + + + +H++
Sbjct: 560 YG-APVGGSSSTPYGVYGGYASGRSSSSGLSSHSS 539
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_023517651.1 | 8.4e-305 | 88.02 | KH domain-containing protein At4g18375-like [Cucurbita pepo subsp. pepo] | [more] |
KAG7026457.1 | 1.1e-304 | 88.02 | KH domain-containing protein [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
XP_023003482.1 | 5.4e-304 | 87.86 | KH domain-containing protein At4g18375-like [Cucurbita maxima] | [more] |
KAG6594458.1 | 7.1e-304 | 87.86 | KH domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
XP_022926572.1 | 1.7e-302 | 87.86 | KH domain-containing protein At4g18375-like [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
P58223 | 6.3e-154 | 51.33 | KH domain-containing protein At4g18375 OS=Arabidopsis thaliana OX=3702 GN=At4g18... | [more] |
Q8W4B1 | 7.2e-41 | 27.68 | RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana OX=3702 GN... | [more] |
F4KDN0 | 1.2e-27 | 27.27 | KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 S... | [more] |
Q9SR13 | 1.3e-18 | 25.91 | Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV... | [more] |
Q0VCU0 | 2.7e-16 | 29.50 | Poly(rC)-binding protein 4 OS=Bos taurus OX=9913 GN=PCBP4 PE=2 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1KMN7 | 2.6e-304 | 87.86 | KH domain-containing protein At4g18375-like OS=Cucurbita maxima OX=3661 GN=LOC11... | [more] |
A0A6J1EER2 | 8.4e-303 | 87.86 | KH domain-containing protein At4g18375-like OS=Cucurbita moschata OX=3662 GN=LOC... | [more] |
A0A6J1CYK2 | 7.4e-299 | 86.42 | KH domain-containing protein At4g18375-like OS=Momordica charantia OX=3673 GN=LO... | [more] |
A0A1S3AZT7 | 1.4e-297 | 85.65 | KH domain-containing protein At4g18375-like OS=Cucumis melo OX=3656 GN=LOC103484... | [more] |
A0A5D3CPJ5 | 1.4e-297 | 85.65 | KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... | [more] |