Sed0026434 (gene) Chayote v1

Overview


Name	Sed0026434
Type	gene
Organism	Sechium edule (Chayote v1)
Description	transcription factor bHLH160
Location	LG10: 34994266 .. 34999655 (+)
RNA-Seq Expression	Sed0026434
Synteny	Sed0026434

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATTGAGACCATGGGAGGAAAATACATTGTTAGATGAAAATAATGAAGTTCTAGAGAGAGAAAATGCAGCAATAATTCCATTATGTTGGAATAATAATAACAATAACAATATTGGTGAAGAAAATCAAAGCCATTTGGTTAAAAGTGGAGATCATCAATTAGAACTATTTTCAAATGAGATAGTAATTGGATCCCTTGTGGAAGCAGCAGCATTATTGGAATTGGAAGATGATGATAATAATATTATTAATTATGGAAAAATTGGGGGATCATCCAATAATATTAATGAAGCTTCAAATGCAAAGAAAGAAGAACACAATGCTAAAGAAAGAGAAAGGAGAATGAAGCTCTCTCAAACTTTCTTCTCACTTCGATCTTTGCTTCCAAATGCTAGACGATCAAAGGTTTGTACTTTTAACCCCCCTTTATTTATTTATTTTTTATTTTAAACACTTAATTAACACACACACACACAATCTTTAAATTTGTATTTATTAAAATTCTCCTATGGTTGATTTCATTTTTTTTTTTTATTATTAGGGTAAAATATAAATTTAGTATCTATGGTTTGAAGAAAACTATAGTTTAGTTCTCATAGTTTTAAAAACTAGAGTTTAGTCTTTATAGGTCGAAGAAAGTTTGAATTTAGTCCCTATAATTTGTAAAAAAAATTAGAATTTAGTCTTATGATTTTAAAAATTAGAATTTAGTCTCTATGATTTTATAAAACCTAAAATATAGCCCTAATCGTATGTAATTACTAGTGTATTAAATACATGAAAATTCACTATTCATGCATAAATTATATAATTTTTTTGTATTTAACTCATAATTTCATCATTGAAATATGAACAAGTAACTTTAAAGTACTTAATTTGCTAACGTTTAGAATGACTGTGACTTTTTTAACTTTTATCAAATCATAGGGACTAAATTCTATACTTTTTCAAAGCATAGGAACTAATCTCTATTTTTTTAAGTCATGAGACTTAACTCTAACTTTCTTCAAACTATAAAGACTAAACTTATAATTTATCGTCAATAAGAGTAGTAGCTCAGTGACATCAGTGTCCATGAGATCATGGGTTCAAATCCACCACCCCTAATTGTTGTAATATTCTCAAATATATATATATATATATACTTAGTATTTTCTAAGACACATGCAAGAAGCATCTAAAGATTTAGTATTTACATCATAATTCTTCACTACTACAAATTTGACCTAGACAAAACTACCAAACTTTAATAATCTCCTCCTCATCAATCAAAGCTTCATAAATTTTAATACCTATTGAATGGTATACATTGACATTATTCAACCCCAAACTCTCCGAATTTAGAAACGAGACCGAATGCCCACCCGCTTTACCAAATGTATATGCATCAAATCTCATCCATAAACACTGAGAGTTCATGGTTGAAAAATTGTGTAAGGATTATTTTGGTTCGAAGGGGATTGAGAACAATGTAATTTTTCTTGATGAGAGAAAAGGATTTTAATGTCAGACTTCGAATGTGAAAAAGCTTGTTTGACTATAGTAACTTATAGTAACAAACTTGAGAGGAAACAATGAAGTATATCATAATCTCTAAAATTCCAAACACACAATGAAATACAGAAATACGAACAAATAAATAAATAAAAAATTGAACAAAGAAAAACCTCAAAACCACGGGAAAAAATATAAGAAAACAAAGAACAACCACAAAACTATGGCGAAAAATATTTTAAAAAAAAAAAACAAAGAAAGAAACACAAAAAAAAACAAAGAACAACTTCAAAACTAAGGAAAAAACTCACATTTTCGACGAAAAATCATAACTAATTTGAGGGCAAACATGACAATTTCAAATATCACTAAGACGAAAGAAACACGAAAAGAAATATTTATGGAGAAGAGCGCAATAAACAAAAGGTTGTAAGCTTTAATTATAGATTTAATTTTTAAATATCAAATGGTTATTAGCTTTAATTAATTGTTTTTAAAATTAAAAAATGACAACTTTTTTAAATTTTAAGTGATTTTTTAAAAATCAAAATTCCTTCATTAACAGTAATAAATTTGATTGAGAAACATTCAAACTCACCCCAACTATGTAGGAGCAAAAACAAAATATAAAGAAATTCGCTTACTAAAAGAATTTCAACCTGACGAAAATTGACTATTAGAAGAACAATCAAAGTTCAAGAAAATTCCAAGAGAATCAACGTATATAATTCTGAGAGTTGATCTTATTATACTTGAGATTGGAAGAACTCAGTATAAAAGATCAATTAAAAAATATCAACGATTCAAAGATCGAGTTTTGTAGAGCTATAGAGGCTAAACCAATAGATATAAGTCATATTGACGAACAAGTAACCACCTAGATAAAAGAAGAGAGTTTCAATACTGTAAAGGAGTGAATACATCTTAAAGGGTAAAAATCGTTCAACTCTATAATAGAAAATTATTTATCAATCAACTCTTCTTCACAAAAGACATGACGAACATGTAACTACTTCCTTGAGACAACGGAGTGCCTAAAGATTCCCTTTTCCTTGAGTTCTCTAGATAAAATGACTTATTGTGAATGATGTTCCTGAATTTCAGAGGACACCCCTTCATATACTAATGAACAACCATCTTCCTCACATAAGATTGAATAGATAACAAGTTAAATAATTCCGCATGTGTATTTCAGGTATCCGTTATAGTATTACAAATTATGTTAAATTACAAGTTCAATCCTCAAATTGTTAAGTTCTATTTAGTTCTTGGACTTATCAAAAAGTGTCTAATAAGCTTGTAAATTTTTTATTTTAAATTTAATAAGTCCTTAATTTTTTTTTTTAGAACGAAAGTTTAAGGTCTTATTGAAAATAAAATTCAATTATACCAATAAAAGGTTAATATTAATGTTTTTTTTATGAGAACTAGTTAATATTATTGTTTTATTGGGTAAATATGATAGAGACTTAGAGACAAAAAATTAAAGTCATAAAAAATAGTACTCTAATAACATTATATACGACCTAGTAATAAAAAAGTTACAAATTCGAATTTCCAATCTCATATGTGTTGAACTCAAAGAAAAAAAAAAGCACACAAAATTAAACATTCTAAGACTTTTGTGACCAAATGAATACAAAGATAAAAATAATAATAATAAATCAATCGAGATTAAACTTGTTATAATTTTTTTTTAGTTCAACAACAATTACAAATATGAAATTCAACTCAAAACGAATTAAAGTATTTAAGACGATTTGATAACCATTTAACTTTTTTTTTTTTAAATTTCTAAAATCAAACCTACAAATTTTACTTTTATTTATAGGTTTCTTTGTTTTGTAATCTAACTTTTTTACCTTTGTTTTCAAAAACACGTTATGAAAACTTCCAAAGTTGCAAGTTCAAAAAACTTGCTTTTGTTTTTGTAGTTTGATTAAGAATTCAAATGCTTTATTTAGAGTTATAAAACCATGGATTGGGAAAAAAACATTCATATTCAAAAACCCAAATAAATAAATAATGACCAAACATAATCTAAATTAACCTAATATTTGGAATTTTGTTTGGTTTTGGGAGTTTTGTTGCAGAAGAGATGGAGCACAGCAACCATAATAGACAAAGTTGTAGACTACATTCCCACACTACAAAAGGAGATAGAGAATTTGAATCAAAAGAAACACAATTTGATAAAAGCAAAAGATACCAACAATAATGATCAAAGAGTAACAATAGCTCATGAAAATCAAGGCTTGGAATTATTTGATCATCATAATCCAACTGTTTCAATCCATCAACTTTGCAAAGGAGAACAACTAATCATCCAAATATGTATAAACCAAACAAATATTCTCAAGTTGTCAACTTTGATCCATAAGGCTCAAGCAGATGGCCTTCGAATCATTGGCGCTTCCGCGGTTTCTGTTTCGGTTCCTTTTTCGGATGATCGTCCAACCCTCACCTGTCATTTGCATCTTCAGGTATTTTTACTACCCCTCATCTAACTATCTTATTTTGAGAAAGATGTTCAGTAAATTTTATCCTTGTGTACTGAGAAAACATTTACACGTATTTGGAGCAAGACAAATAAGAATGATTATGAGCAGAATAAAAATTAGAGAAAGAATAAAGAAATGGATTATAGAGGAAAGATGATTAGTGTTTGAGTACATAAAATGTTTAATTAGGGTTTATGGTGGAAATGATTATAAGAAAATTAAACAATGAATATAGAAAATAAAAATAATTATAGGAAGAATGAAATATAGTTATGAAAAGAATAAAATTGTGAGAAGAATAAAAAATGATTATGAGTAATAAATATAAATCCTAGGGAGATGATTTTCGATAGCCAAAATGTGGTAAAAGAATAGAACGAATCATTCTTATCATTGTCTCATGCATGGATGTTAATAGAGATGGTAGGAAAACAGTCCAATTTTAAGATGAAAAATACTTGATTCCTTATGACTAAGAATGCAAGTTCTCTTAAGGGTAAGGGTGATGGTGCACTATTTCATGGCACAAATTTTTTGTTTCAAAAGAAGATAAAAAAAATTAGGTGATTCTAAAAAAAATAAAAAAAATTGTGGCACAAAATAATATCACATCACTGACTTGCATCCTTAGTCATTAGGAGGTAAGTACAGCTCTTTTAAAAGTTAGGGTCGACAATTTTAGAAAGACATTAAATTGTGACCGTGTCATTAAATCATTTAAATTAAAAACCTGAAATTAGGTGATTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTGATGATTTGTGTGGTTGATCCATGAGCATTTTAGTGGCTATTTGTGAGGGTGATTTTTTTACCACTTTTTTTTTTTTTACTTGGATTTTTTTACCACTGAATTAATTAATAGCTTTAATGCTATATAGGTTCGAATCTTTTTTAATTTTTTATATTTATATTATCAAGCTTGAGTGTTTTTGTGATTACTATTGATATATTTTTTGTTAAATTCAAGTTATTTCATGGTTGAATTTAAATGGTTCTGTAGTATGAACCCAATAATTTTCAAGATTGTTGCTCCCTACTTTCATCTAAGATATATGCCGAAGAACTTTTAACCATGACATTAATTTAAAGCAATTTCTATAAATCAAGATTCTTCATTTAAATATATATATATACACATATATGTATATCAAGATTCTTTTTTCTTTATTTTGTGGAGGGTTACTTTTTTGTTTTAATTGAAAAAATATATGAGGTGACAATTCAAACCTTTAAACTTTAACCTTTCATGGTAATTCTAAATTAAATTGATAACTAATGAGTGATTTGTGCAGGTAAACAGAAGTTTACTAGAAGCAGGCAACCACGAATCAATATTAAGAAAAAAGGTAATTTCTTGGATATGTTGA

mRNA sequence

ATGGCATTGAGACCATGGGAGGAAAATACATTGTTAGATGAAAATAATGAAGTTCTAGAGAGAGAAAATGCAGCAATAATTCCATTATGTTGGAATAATAATAACAATAACAATATTGGTGAAGAAAATCAAAGCCATTTGGTTAAAAGTGGAGATCATCAATTAGAACTATTTTCAAATGAGATAGTAATTGGATCCCTTGTGGAAGCAGCAGCATTATTGGAATTGGAAGATGATGATAATAATATTATTAATTATGGAAAAATTGGGGGATCATCCAATAATATTAATGAAGCTTCAAATGCAAAGAAAGAAGAACACAATGCTAAAGAAAGAGAAAGGAGAATGAAGCTCTCTCAAACTTTCTTCTCACTTCGATCTTTGCTTCCAAATGCTAGACGATCAAAGGCTCAAGCAGATGGCCTTCGAATCATTGGCGCTTCCGCGGTTTCTGTTTCGGTTCCTTTTTCGGATGATCGTCCAACCCTCACCTGTCATTTGCATCTTCAGGTAAACAGAAGTTTACTAGAAGCAGGCAACCACGAATCAATATTAAGAAAAAAGGTAATTTCTTGGATATGTTGA

Coding sequence (CDS)

ATGGCATTGAGACCATGGGAGGAAAATACATTGTTAGATGAAAATAATGAAGTTCTAGAGAGAGAAAATGCAGCAATAATTCCATTATGTTGGAATAATAATAACAATAACAATATTGGTGAAGAAAATCAAAGCCATTTGGTTAAAAGTGGAGATCATCAATTAGAACTATTTTCAAATGAGATAGTAATTGGATCCCTTGTGGAAGCAGCAGCATTATTGGAATTGGAAGATGATGATAATAATATTATTAATTATGGAAAAATTGGGGGATCATCCAATAATATTAATGAAGCTTCAAATGCAAAGAAAGAAGAACACAATGCTAAAGAAAGAGAAAGGAGAATGAAGCTCTCTCAAACTTTCTTCTCACTTCGATCTTTGCTTCCAAATGCTAGACGATCAAAGGCTCAAGCAGATGGCCTTCGAATCATTGGCGCTTCCGCGGTTTCTGTTTCGGTTCCTTTTTCGGATGATCGTCCAACCCTCACCTGTCATTTGCATCTTCAGGTAAACAGAAGTTTACTAGAAGCAGGCAACCACGAATCAATATTAAGAAAAAAGGTAATTTCTTGGATATGTTGA

Protein sequence

MALRPWEENTLLDENNEVLERENAAIIPLCWNNNNNNNIGEENQSHLVKSGDHQLELFSNEIVIGSLVEAAALLELEDDDNNIINYGKIGGSSNNINEASNAKKEEHNAKERERRMKLSQTFFSLRSLLPNARRSKAQADGLRIIGASAVSVSVPFSDDRPTLTCHLHLQVNRSLLEAGNHESILRKKVISWIC

Homology

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BLAST of Sed0026434 vs. NCBI nr
Match: XP_031743831.1 (transcription factor bHLH160 [Cucumis sativus] >KAE8647334.1 hypothetical protein Csa_004052 [Cucumis sativus])

HSP 1 Score: 115.9 bits (289), Expect = 3.8e-22
Identity = 112/313 (35.78%), Postives = 144/313 (46.01%), Query Frame = 0


Query: 1   MALRPWEENTLLDENNEVLERENAAIIPL-CWNNNNN--NNIGEENQSHLVKSGDHQLEL 60
           M+L PWEE+ L+DE+N + E+EN    PL  W+NNN     I  + QS   KSG+  L L
Sbjct: 1   MSLIPWEEHILIDEDNGIEEKEN----PLRNWSNNNGELEEIFIDIQSS--KSGEEAL-L 60

Query: 61  FSNEIVIGSLVEAAALLELEDDDNNI----------------INYGKIGGSSNNINEASN 120
             NEI IGSLVE + LL LE++D++I                IN      S++N    +N
Sbjct: 61  LPNEI-IGSLVEDSTLLGLEENDHSIDGVLERENSKLFPPTSINVHNEEPSNSN---KAN 120

Query: 121 AKKEEHNAKERERRMKLSQTFFSLRSLLPNARRS-------------------------- 180
           AKKEEHNA+ER+RR+KLS ++FSLRSLLPNARRS                          
Sbjct: 121 AKKEEHNARERQRRLKLSHSYFSLRSLLPNARRSKKRWSAGTIIDKVVDYIPTLQKEIEN 180

Query: 181 ------------------------------------------------------------ 195
                                                                       
Sbjct: 181 MNQKKQKLIKAKKNMSNNNERVSVSVEENEGLDQYYNNINPTVSIHQLCKGEVIIQICIN 240

[Close]

BLAST of Sed0026434 vs. NCBI nr
Match: XP_038888939.1 (transcription factor bHLH160 [Benincasa hispida])

HSP 1 Score: 109.8 bits (273), Expect = 2.7e-20
Identity = 99/290 (34.14%), Postives = 139/290 (47.93%), Query Frame = 0


Query: 1   MALRPWEENTLLDENNEVLERENAAIIPLCWNNNNNNNIGEENQSHLVKSGDHQLELFSN 60
           M+L  WEE  L++ENN + E EN  ++ L  ++ +NNN GE  ++ L ++G+    L S+
Sbjct: 1   MSLTQWEEYILMNENNGISEIENPELLGLSLSSLSNNN-GELEETQLSENGE---ALLSD 60

Query: 61  EIVIGSLVEAAALLELEDDDNNII--NYGKIGGSS-------NNINEASNAKKEEHNAKE 120
           EI +GSL+EAA LL LE++ + ++     K+  SS        +I   +NAKKEEHNA+E
Sbjct: 61  EI-LGSLMEAATLLGLEENIDGVLEKESSKLIPSSIINANIEPSIANKANAKKEEHNARE 120

Query: 121 RERRMKLSQTFFSLRSLLPNARRS------------------------------------ 180
           R+RRM+LS ++FSLRSLLPNARRS                                    
Sbjct: 121 RQRRMQLSHSYFSLRSLLPNARRSKKRWSSGTIIDKVVDYIPTLQKEIENMNQKKQKLIK 180

Query: 181 --------------------------------------------------------KAQA 190
                                                                   KAQA
Sbjct: 181 AKEMSNERVLLVDENEGLNNNPTVSIHQLCKGEVIIQICINQRNNNVIINFSNLIQKAQA 240

[Close]

BLAST of Sed0026434 vs. NCBI nr
Match: XP_022159073.1 (transcription factor bHLH160 [Momordica charantia])

HSP 1 Score: 107.8 bits (268), Expect = 1.0e-19
Identity = 93/285 (32.63%), Postives = 115/285 (40.35%), Query Frame = 0


Query: 1   MALRPWEENTL-LDENNEVLERENAAIIPLCWNNNNNNNIGEENQSHLVKSGDHQLELFS 60
           MAL PWEE+ L +D+N   +EREN  + P+   + N NNI E   +H  K+         
Sbjct: 11  MALAPWEEDILNIDQNYGFVERENPPLFPIFPPSINGNNIEE---THFSKAS-------- 70

Query: 61  NEIVIGSLVEAAALLELEDDDNNIINYGKIGGSSNNINEASNAKKEEHNAKERERRMKLS 120
                                                N  +NAKKEEHNAKERERRMKLS
Sbjct: 71  -------------------------------------NSNANAKKEEHNAKERERRMKLS 130

Query: 121 QTFFSLRSLLPNARRS-------------------------------------------- 180
           QT+FSLRSLLPN+RRS                                            
Sbjct: 131 QTYFSLRSLLPNSRRSKKRWSSSRIIDKVIEYIPTVEKEIEKQKHKKEELIKAKEMRNYN 190

Query: 181 -----------------------------------------------KAQADGLRIIGAS 194
                                                          KA+A+G+ IIGAS
Sbjct: 191 NNNERVTAAATVSTHPLSNSGEVIIQICINQKPAAENYCILFSSLIRKAEAEGITIIGAS 243

[Close]

BLAST of Sed0026434 vs. NCBI nr
Match: XP_008449406.1 (PREDICTED: transcription factor bHLH100 [Cucumis melo])

HSP 1 Score: 104.4 bits (259), Expect = 1.1e-18
Identity = 102/313 (32.59%), Postives = 134/313 (42.81%), Query Frame = 0


Query: 1   MALRPWEENTLLDENNEVLERENAAIIPLCWNNNNNNNIGEENQSHLVKSGDHQLELFSN 60
           M+L PWEE+ L+DE+N + E E     PL   N +NNN   E    L KSG+  L L  N
Sbjct: 1   MSLTPWEEHILIDEDNGIEEEET----PL--RNWSNNNGELEEIIRLSKSGEEAL-LLPN 60

Query: 61  EIVIGSLVEAAALLELEDDDNNIINYGKIGGSSNNI---------------NEASNAKKE 120
           EI+  SLVE + LL L++ DN    YG +   ++ +               +   NAKKE
Sbjct: 61  EIIGRSLVEDSTLLGLKESDN---IYGVLERENSKLFPPPSINAHNEEPSNSNKENAKKE 120

Query: 121 EHNAKERERRMKLSQTFFSLRSLLPNARRS------------------------------ 180
           EHNA+ER+RR++LS ++FSLRSLLPNARRS                              
Sbjct: 121 EHNARERQRRLELSHSYFSLRSLLPNARRSKKRWSSGTIIDKVVDYIPTLQKEIEKMNQK 180

Query: 181 ------------------------------------------------------------ 195
                                                                       
Sbjct: 181 KQNLIKAKERIMSNNNAERVLVSVDENEGLDNQYYNNINPTVSIHQLCEGEVIIQICINP 240

[Close]

BLAST of Sed0026434 vs. NCBI nr
Match: XP_022967618.1 (transcription factor bHLH160 [Cucurbita maxima])

HSP 1 Score: 102.1 bits (253), Expect = 5.7e-18
Identity = 102/290 (35.17%), Postives = 121/290 (41.72%), Query Frame = 0


Query: 1   MALRPWEE-NTLLDENNEVLERENAAIIPLCWNNNNNNNIGEENQSHLVKSGDHQLELFS 60
           MA+ PWE   TL DENN                       GEE ++ L K G    E   
Sbjct: 1   MAVTPWESYYTLTDENN-----------------------GEE-ETQLPKGG----EALC 60

Query: 61  NEIVIGSLVEAAALLELEDDDNNIINYGKIGGSSN------NIN-EASNAKKEEHNAKER 120
            E   GS+ E AALL LE+D      YG  G  +       N N E SNAKKEEHNA+ER
Sbjct: 61  GE-KGGSMAEVAALLGLEED-----IYGGFGRENEAFPPAMNANIEPSNAKKEEHNARER 120

Query: 121 ERRMKLSQTFFSLRSLLPNARRS------------------------------------- 180
           +RRM+LSQ +FSLRSLLPNARRS                                     
Sbjct: 121 QRRMELSQLYFSLRSLLPNARRSKKRWSSTTIINKVVDYIPTLQKEIENMKEKKQKMIKE 180

Query: 181 -----------------------------------------------------KAQADGL 193
                                                                KA+ DGL
Sbjct: 181 KGKSNERVLVDEKEGLENDNLSVLVHQVCKGEVIIQICIKQRNNMINFSNLIQKAEEDGL 240

[Close]

BLAST of Sed0026434 vs. ExPASy TrEMBL
Match: A0A0A0KGG0 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G417860 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 3.2e-35
Identity = 112/214 (52.34%), Postives = 144/214 (67.29%), Query Frame = 0


Query: 1   MALRPWEENTLLDENNEVLERENAAIIPL-CWNNNNN--NNIGEENQSHLVKSGDHQLEL 60
           M+L PWEE+ L+DE+N + E+EN    PL  W+NNN     I  + QS   KSG+  L L
Sbjct: 1   MSLIPWEEHILIDEDNGIEEKEN----PLRNWSNNNGELEEIFIDIQSS--KSGEEAL-L 60

Query: 61  FSNEIVIGSLVEAAALLELEDDDNNI----------------INYGKIGGSSNNINEASN 120
             NEI IGSLVE + LL LE++D++I                IN      S++N    +N
Sbjct: 61  LPNEI-IGSLVEDSTLLGLEENDHSIDGVLERENSKLFPPTSINVHNEEPSNSN---KAN 120

Query: 121 AKKEEHNAKERERRMKLSQTFFSLRSLLPNARRSKAQADGLRIIGASAVSVSVPFSDDRP 180
           AKKEEHNA+ER+RR+KLS ++FSLRSLLPNARRSKA+A+GLRIIGAS VSV    S D  
Sbjct: 121 AKKEEHNARERQRRLKLSHSYFSLRSLLPNARRSKAEAEGLRIIGASTVSV----SHDHQ 180

Query: 181 TLTCHLHLQ-VNRSLLEAGNHESILRKKVISWIC 195
            LT HLH+Q ++RSL EA ++ES+LRK+VISW+C
Sbjct: 181 ILTSHLHIQMMDRSLQEAADYESMLRKRVISWLC 199

[Close]

BLAST of Sed0026434 vs. ExPASy TrEMBL
Match: A0A6J1DXT5 (transcription factor bHLH160 OS=Momordica charantia OX=3673 GN=LOC111025515 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 5.0e-20
Identity = 93/285 (32.63%), Postives = 115/285 (40.35%), Query Frame = 0


Query: 1   MALRPWEENTL-LDENNEVLERENAAIIPLCWNNNNNNNIGEENQSHLVKSGDHQLELFS 60
           MAL PWEE+ L +D+N   +EREN  + P+   + N NNI E   +H  K+         
Sbjct: 11  MALAPWEEDILNIDQNYGFVERENPPLFPIFPPSINGNNIEE---THFSKAS-------- 70

Query: 61  NEIVIGSLVEAAALLELEDDDNNIINYGKIGGSSNNINEASNAKKEEHNAKERERRMKLS 120
                                                N  +NAKKEEHNAKERERRMKLS
Sbjct: 71  -------------------------------------NSNANAKKEEHNAKERERRMKLS 130

Query: 121 QTFFSLRSLLPNARRS-------------------------------------------- 180
           QT+FSLRSLLPN+RRS                                            
Sbjct: 131 QTYFSLRSLLPNSRRSKKRWSSSRIIDKVIEYIPTVEKEIEKQKHKKEELIKAKEMRNYN 190

Query: 181 -----------------------------------------------KAQADGLRIIGAS 194
                                                          KA+A+G+ IIGAS
Sbjct: 191 NNNERVTAAATVSTHPLSNSGEVIIQICINQKPAAENYCILFSSLIRKAEAEGITIIGAS 243

[Close]

BLAST of Sed0026434 vs. ExPASy TrEMBL
Match: A0A1S3BLZ5 (transcription factor bHLH100 OS=Cucumis melo OX=3656 GN=LOC103491303 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 5.6e-19
Identity = 102/313 (32.59%), Postives = 134/313 (42.81%), Query Frame = 0


Query: 1   MALRPWEENTLLDENNEVLERENAAIIPLCWNNNNNNNIGEENQSHLVKSGDHQLELFSN 60
           M+L PWEE+ L+DE+N + E E     PL   N +NNN   E    L KSG+  L L  N
Sbjct: 1   MSLTPWEEHILIDEDNGIEEEET----PL--RNWSNNNGELEEIIRLSKSGEEAL-LLPN 60

Query: 61  EIVIGSLVEAAALLELEDDDNNIINYGKIGGSSNNI---------------NEASNAKKE 120
           EI+  SLVE + LL L++ DN    YG +   ++ +               +   NAKKE
Sbjct: 61  EIIGRSLVEDSTLLGLKESDN---IYGVLERENSKLFPPPSINAHNEEPSNSNKENAKKE 120

Query: 121 EHNAKERERRMKLSQTFFSLRSLLPNARRS------------------------------ 180
           EHNA+ER+RR++LS ++FSLRSLLPNARRS                              
Sbjct: 121 EHNARERQRRLELSHSYFSLRSLLPNARRSKKRWSSGTIIDKVVDYIPTLQKEIEKMNQK 180

Query: 181 ------------------------------------------------------------ 195
                                                                       
Sbjct: 181 KQNLIKAKERIMSNNNAERVLVSVDENEGLDNQYYNNINPTVSIHQLCEGEVIIQICINP 240

[Close]

BLAST of Sed0026434 vs. ExPASy TrEMBL
Match: A0A6J1HVK8 (transcription factor bHLH160 OS=Cucurbita maxima OX=3661 GN=LOC111467064 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 2.8e-18
Identity = 102/290 (35.17%), Postives = 121/290 (41.72%), Query Frame = 0


Query: 1   MALRPWEE-NTLLDENNEVLERENAAIIPLCWNNNNNNNIGEENQSHLVKSGDHQLELFS 60
           MA+ PWE   TL DENN                       GEE ++ L K G    E   
Sbjct: 1   MAVTPWESYYTLTDENN-----------------------GEE-ETQLPKGG----EALC 60

Query: 61  NEIVIGSLVEAAALLELEDDDNNIINYGKIGGSSN------NIN-EASNAKKEEHNAKER 120
            E   GS+ E AALL LE+D      YG  G  +       N N E SNAKKEEHNA+ER
Sbjct: 61  GE-KGGSMAEVAALLGLEED-----IYGGFGRENEAFPPAMNANIEPSNAKKEEHNARER 120

Query: 121 ERRMKLSQTFFSLRSLLPNARRS------------------------------------- 180
           +RRM+LSQ +FSLRSLLPNARRS                                     
Sbjct: 121 QRRMELSQLYFSLRSLLPNARRSKKRWSSTTIINKVVDYIPTLQKEIENMKEKKQKMIKE 180

Query: 181 -----------------------------------------------------KAQADGL 193
                                                                KA+ DGL
Sbjct: 181 KGKSNERVLVDEKEGLENDNLSVLVHQVCKGEVIIQICIKQRNNMINFSNLIQKAEEDGL 240

[Close]

BLAST of Sed0026434 vs. ExPASy TrEMBL
Match: A0A6J1HFM3 (transcription factor bHLH160 OS=Cucurbita moschata OX=3662 GN=LOC111463877 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 8.0e-18
Identity = 100/292 (34.25%), Postives = 120/292 (41.10%), Query Frame = 0


Query: 1   MALRPWEE-NTLLDENNEVLERENAAIIPLCWNNNNNNNIGEENQSHLVKSGDHQLELFS 60
           MA+ PWE   TL DENN                       GEE Q+ L K G    E   
Sbjct: 1   MAVAPWESYYTLTDENN-----------------------GEE-QTLLPKGG----EALC 60

Query: 61  NEIVIGSLVEAAALLELEDDDNNIINYGKIGGSS-------NNINEASNAKKEEHNAKER 120
            EI  GS+ E AALL LE+D      YG  G  +       N   E SNAKKEEHNA+ER
Sbjct: 61  GEIG-GSMAEVAALLGLEED-----IYGGFGRENAAFPPAMNANIEPSNAKKEEHNARER 120

Query: 121 ERRMKLSQTFFSLRSLLPNARRS------------------------------------- 180
           +RRM+LSQ +FSLRSLLPNARRS                                     
Sbjct: 121 QRRMELSQLYFSLRSLLPNARRSKKRWSSTTIINKVVDYIPTLQKEIENMKEKKQKMIKE 180

Query: 181 -----------------------------------------------------KAQADGL 195
                                                                KA+ +GL
Sbjct: 181 KGKSNERVLVDEKEGLENDNLSVLVHQVCKGEVIIQICINQRNNMITFSNLIQKAEEEGL 240

The following BLAST results are available for this feature:

BLAST of Sed0026434 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031743831.1	3.8e-22	35.78	transcription factor bHLH160 [Cucumis sativus] >KAE8647334.1 hypothetical protei...	[more]
XP_038888939.1	2.7e-20	34.14	transcription factor bHLH160 [Benincasa hispida]	[more]
XP_022159073.1	1.0e-19	32.63	transcription factor bHLH160 [Momordica charantia]	[more]
XP_008449406.1	1.1e-18	32.59	PREDICTED: transcription factor bHLH100 [Cucumis melo]	[more]
XP_022967618.1	5.7e-18	35.17	transcription factor bHLH160 [Cucurbita maxima]	[more]

BLAST of Sed0026434 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0026434 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGG0	3.2e-35	52.34	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G417860 PE=4 S...	[more]
A0A6J1DXT5	5.0e-20	32.63	transcription factor bHLH160 OS=Momordica charantia OX=3673 GN=LOC111025515 PE=4...	[more]
A0A1S3BLZ5	5.6e-19	32.59	transcription factor bHLH100 OS=Cucumis melo OX=3656 GN=LOC103491303 PE=4 SV=1	[more]
A0A6J1HVK8	2.8e-18	35.17	transcription factor bHLH160 OS=Cucurbita maxima OX=3661 GN=LOC111467064 PE=4 SV...	[more]
A0A6J1HFM3	8.0e-18	34.25	transcription factor bHLH160 OS=Cucurbita moschata OX=3662 GN=LOC111463877 PE=4 ...	[more]

BLAST of Sed0026434 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 93..187 e-value: 8.9E-8 score: 34.0
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 100..136
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 103..138 e-value: 6.2E-6 score: 26.1
IPR015660	Achaete-scute transcription factor-related	PANTHER	PTHR13935	ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED	coord: 59..136
None	No IPR available	PANTHER	PTHR13935:SF104	TRANSCRIPTION FACTOR BHLH160	coord: 59..136

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0026434.1	Sed0026434.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity