Sed0026373 (gene) Chayote v1

Overview


Name	Sed0026373
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Kelch repeat-containing F-box family protein
Location	LG09: 35222487 .. 35225146 (+)
RNA-Seq Expression	Sed0026373
Synteny	Sed0026373

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTGGAAAAAAGGCAAGAATGAAGGGGATTATTATCCTCTGTGCTATCTGATCAACAAACTGTCAATTGTTGCTCCATAATCTGAGCAACGGAGCTGATCATTTCATATCGCAGTTCTGTGTTTGAGGTGAAATCCAAATCCTTCTTAATTCCCCCCTTTTCATTTCTGTTTAATCGCAATCCAAAATTGCCCTAATTTACAGCCCTCCATCCAAAAACTTGTTTGTTTATATTTAGCGTGTGTTTGGAGCATCGGTTTGGTTATGATAGACGGAAGGTTATGATATAGAGTGAGTTATTATAATTGATGTTTGATAGACAAGTTATTATAATACGAAATGGTATTTGATGGACTGGTTATATAACAAAAAGTAATATATGTAAGGTTTAGATAAACGGGCACACAGGTAACCACCGTTTATAATAAATGGTGTGACAAATATAGGTTGAGTTGTTATAACCAACTCACCCGTTTACATAAATGAGGGCCCAAACACACATGTTTACATTTCATCTTTAATGGAGTCTGTAGGCTACTCATTTTCTGCTTTCGATCTGGAATCACCATCACGATGGACTCCTATGCTTTTTTTCTTCTAGTTCTTTTTATGTTCTTGTCGCCTGAATAGATTATGGGAGTTTAATAATATAATTTATTGTTTTTATTTTTTATGTTAGTATTTGGATATTGAATTCTTGAAATGTCCTGGATTTTGCCTGAGTTGTCTGATAAAGTATAAATGTAGAGGTTTGTGGTGTTTAAGGTATGTTCCTTTTATGGTCTCGAGTTCAAAATGCACGAGTGAGCTTAATTATAGAATCATTTTTTATTTTTTGGGACTGGGCCTTGAGACGGGTGTAGAAAAGAAAAAACAAATTGATGTGCAAAAGAATGTAATATTTGTACTGATATTCTTGAAAAGGACTATGCTATTCAATTTTCTCCTTTTGCATCATTGTTTTTCTTATTCCGCTTTTCACTTTTGTAAAACGAATTGGGATGTAGAAACTATTTTTGTTCTTGTGTCTCAAAAGGAGTACTAGATTTTGAAAAGGATTTAGTAGAAATCCAGTAAGTGGTTACTTTTCACCTATTATATTGGCTGGTTTCTCATAATATACTTTTTTGTTTCCAAGAGACCTGGATTGGACATAAGTTTCATCTGTCATAACTTGAATCCTTTCTCAGATACAAGTGAAGTTTTCCTTCCTCAGAACAAAATCTAGTTATCTGTTAGCAATGAAATCGAGTGGTTAAATAAGAGGGTACTGATTTAGATTTTACTCTGTCTCATGTTTTTATATATTACTTGATGTGTTTCAGCTGGCTTGTTTGAGACTGAGGGTACAAAAGATAATCTGGAATTGAAGATCATGTCTAGTCTGATGGAAGGTCTCCCCGATGAAGTCGCCCTTAGATGCCTTGCTTTTGTTCCGTTTTACCTTCATCCCAAGTTGGAACTTGTTTCCCGGTCCTGGAGATCTGTCATTCGTAGTGGGAAAATTTTCAAAGTTCGAGAGGAGGTTGGTTCAGTGGAGGATTTACTATTTGTGTGCTGTTACGACGACGATAATACATGGCAGTTCTTTGACCCTCTTCGAGACCTTTGGATCACCCTTCCTCGACTTCCATCGACAAGAAAGAGTGCTTCTAGCGTTGTCTCCATTTCTCAAAAGCTGTTTGTTCTTGGTGGTATTTTCAATGATCCTCTTAATCCAATGTCTGATGATTTTGCATGCAATGAGGTATGGTCCTTTGACCCTGTAACTCGAAATTGGTTGATGCAAGCACCAATGCTCGAGTCACGTGCTGTGTTTGCTTGCGCTGTTTTGGATGGGAAGATCATTGTTGTAGGTGGCTTGGATATAAAACATGAACCAACATCTAAGGTAGAAATGTATGACCCTGAGATGGATCTTTGGGTACCATTACCTGATCTACCTGAAACCTATAAGTCATATTTAGGCTGCTTTGCAGTAGTTGTTGGAACAAAAATGCACTTCGTTTACAATGGAATCCCCTTAGTGCAAACATTTGACAGTACGGATTGTACGTGGACAGTTGAGGATTACGGTTGGTTTTGCGACATCAATGCGGTGGTTCCTTTTCAAGATTCACTCTACATCATGAGCCATGGATGTATCTTCAAGCAGGATGGACGAGACTACGATTTTTTTGCTCCGGCGCATGAGTTTAATTCTAGGGATAGGGCGAGAATGATCTGTTTTAGAGGCGAACTATATGTGATTGGAGGAAGAATTTACTTCGAGAACGATTATGAAAATCTATCTGACGTGAACGTTCTTACTCTGGGAGGCAATGAGCCATCTTGGGTCTCGGCTACTCCGATGAGTCGAGGATCTGGAGTTGTTCTTGGTTGTGCAGAGTTGAGGATTTAAGATTTGAATGTTTTCTTTTCTAGTGTTTTGTTGTCAGGTTTGAGGATGAGGTTAAAAATGGGCTCTAAAATGGCATCTATCCTTAGAAGCTTTGTATGAGAGCTTGAAACAGGTCGCAACAATGGTGGTGCTTCATTAAACTTTTTGATTTAGTTGATGTTGTATGCTTTTGTCATTAGAATTATTATGTACATCACCATATTACTGGGGCTTTTCCTGGAAGATATATATATAGAAAAAGTAGTGCTTTATTAGAAA

mRNA sequence

ATTTTGGAAAAAAGGCAAGAATGAAGGGGATTATTATCCTCTGTGCTATCTGATCAACAAACTGTCAATTGTTGCTCCATAATCTGAGCAACGGAGCTGATCATTTCATATCGCAGTTCTGTGTTTGAGCTGGCTTGTTTGAGACTGAGGGTACAAAAGATAATCTGGAATTGAAGATCATGTCTAGTCTGATGGAAGGTCTCCCCGATGAAGTCGCCCTTAGATGCCTTGCTTTTGTTCCGTTTTACCTTCATCCCAAGTTGGAACTTGTTTCCCGGTCCTGGAGATCTGTCATTCGTAGTGGGAAAATTTTCAAAGTTCGAGAGGAGGTTGGTTCAGTGGAGGATTTACTATTTGTGTGCTGTTACGACGACGATAATACATGGCAGTTCTTTGACCCTCTTCGAGACCTTTGGATCACCCTTCCTCGACTTCCATCGACAAGAAAGAGTGCTTCTAGCGTTGTCTCCATTTCTCAAAAGCTGTTTGTTCTTGGTGGTATTTTCAATGATCCTCTTAATCCAATGTCTGATGATTTTGCATGCAATGAGGTATGGTCCTTTGACCCTGTAACTCGAAATTGGTTGATGCAAGCACCAATGCTCGAGTCACGTGCTGTGTTTGCTTGCGCTGTTTTGGATGGGAAGATCATTGTTGTAGGTGGCTTGGATATAAAACATGAACCAACATCTAAGGTAGAAATGTATGACCCTGAGATGGATCTTTGGGTACCATTACCTGATCTACCTGAAACCTATAAGTCATATTTAGGCTGCTTTGCAGTAGTTGTTGGAACAAAAATGCACTTCGTTTACAATGGAATCCCCTTAGTGCAAACATTTGACAGTACGGATTGTACGTGGACAGTTGAGGATTACGGTTGGTTTTGCGACATCAATGCGGTGGTTCCTTTTCAAGATTCACTCTACATCATGAGCCATGGATGTATCTTCAAGCAGGATGGACGAGACTACGATTTTTTTGCTCCGGCGCATGAGTTTAATTCTAGGGATAGGGCGAGAATGATCTGTTTTAGAGGCGAACTATATGTGATTGGAGGAAGAATTTACTTCGAGAACGATTATGAAAATCTATCTGACGTGAACGTTCTTACTCTGGGAGGCAATGAGCCATCTTGGGTCTCGGCTACTCCGATGAGTCGAGGATCTGGAGTTGTTCTTGGTTGTGCAGAGTTGAGGATTTAAGATTTGAATGTTTTCTTTTCTAGTGTTTTGTTGTCAGGTTTGAGGATGAGGTTAAAAATGGGCTCTAAAATGGCATCTATCCTTAGAAGCTTTGTATGAGAGCTTGAAACAGGTCGCAACAATGGTGGTGCTTCATTAAACTTTTTGATTTAGTTGATGTTGTATGCTTTTGTCATTAGAATTATTATGTACATCACCATATTACTGGGGCTTTTCCTGGAAGATATATATATAGAAAAAGTAGTGCTTTATTAGAAA

Coding sequence (CDS)

ATGTCTAGTCTGATGGAAGGTCTCCCCGATGAAGTCGCCCTTAGATGCCTTGCTTTTGTTCCGTTTTACCTTCATCCCAAGTTGGAACTTGTTTCCCGGTCCTGGAGATCTGTCATTCGTAGTGGGAAAATTTTCAAAGTTCGAGAGGAGGTTGGTTCAGTGGAGGATTTACTATTTGTGTGCTGTTACGACGACGATAATACATGGCAGTTCTTTGACCCTCTTCGAGACCTTTGGATCACCCTTCCTCGACTTCCATCGACAAGAAAGAGTGCTTCTAGCGTTGTCTCCATTTCTCAAAAGCTGTTTGTTCTTGGTGGTATTTTCAATGATCCTCTTAATCCAATGTCTGATGATTTTGCATGCAATGAGGTATGGTCCTTTGACCCTGTAACTCGAAATTGGTTGATGCAAGCACCAATGCTCGAGTCACGTGCTGTGTTTGCTTGCGCTGTTTTGGATGGGAAGATCATTGTTGTAGGTGGCTTGGATATAAAACATGAACCAACATCTAAGGTAGAAATGTATGACCCTGAGATGGATCTTTGGGTACCATTACCTGATCTACCTGAAACCTATAAGTCATATTTAGGCTGCTTTGCAGTAGTTGTTGGAACAAAAATGCACTTCGTTTACAATGGAATCCCCTTAGTGCAAACATTTGACAGTACGGATTGTACGTGGACAGTTGAGGATTACGGTTGGTTTTGCGACATCAATGCGGTGGTTCCTTTTCAAGATTCACTCTACATCATGAGCCATGGATGTATCTTCAAGCAGGATGGACGAGACTACGATTTTTTTGCTCCGGCGCATGAGTTTAATTCTAGGGATAGGGCGAGAATGATCTGTTTTAGAGGCGAACTATATGTGATTGGAGGAAGAATTTACTTCGAGAACGATTATGAAAATCTATCTGACGTGAACGTTCTTACTCTGGGAGGCAATGAGCCATCTTGGGTCTCGGCTACTCCGATGAGTCGAGGATCTGGAGTTGTTCTTGGTTGTGCAGAGTTGAGGATTTAA

Protein sequence

MSSLMEGLPDEVALRCLAFVPFYLHPKLELVSRSWRSVIRSGKIFKVREEVGSVEDLLFVCCYDDDNTWQFFDPLRDLWITLPRLPSTRKSASSVVSISQKLFVLGGIFNDPLNPMSDDFACNEVWSFDPVTRNWLMQAPMLESRAVFACAVLDGKIIVVGGLDIKHEPTSKVEMYDPEMDLWVPLPDLPETYKSYLGCFAVVVGTKMHFVYNGIPLVQTFDSTDCTWTVEDYGWFCDINAVVPFQDSLYIMSHGCIFKQDGRDYDFFAPAHEFNSRDRARMICFRGELYVIGGRIYFENDYENLSDVNVLTLGGNEPSWVSATPMSRGSGVVLGCAELRI

Homology

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BLAST of Sed0026373 vs. NCBI nr
Match: XP_038896848.1 (F-box/kelch-repeat protein SKIP30-like [Benincasa hispida] >XP_038896849.1 F-box/kelch-repeat protein SKIP30-like [Benincasa hispida])

HSP 1 Score: 440.3 bits (1131), Expect = 1.5e-119
Identity = 208/343 (60.64%), Postives = 254/343 (74.05%), Query Frame = 0


Query: 1   MSSLMEGLPDEVALRCLAFVPFYLHPKLELVSRSWRSVIRSGKIFKVREEVGSVEDLLFV 60
           MSSL+EGLP +VALRCLAFVPFYLHP LELV RSWR VI SG+I++VR E G+VEDLLFV
Sbjct: 1   MSSLIEGLPHDVALRCLAFVPFYLHPTLELVCRSWRDVICSGEIYRVRWECGTVEDLLFV 60

Query: 61  CCYDDDNTWQFFDPLRDLWITLPRLPSTRKSASSVVSISQKLFVLGGIFNDPLNP-MSDD 120
           CC+D++N WQF+DP+ D W+TLP LP  RK    VVS  QKLF+LGG+  + ++P + +D
Sbjct: 61  CCHDEENKWQFYDPIEDFWVTLPELPGGRKHYFGVVSTYQKLFILGGLLINTIDPSIDED 120

Query: 121 FACNEVWSFDPVTRNWLMQAPMLESRAVFACAVLDGKIIVVGGLDIKHEPTSKVEMYDPE 180
           F+C EVWSF+P+TR W  QAPM ESRA+FAC VLDGKIIV GG++ K E TSK EMYDP 
Sbjct: 121 FSCTEVWSFNPMTRKWKQQAPMHESRALFACGVLDGKIIVAGGMNRKFESTSKAEMYDPV 180

Query: 181 MDLWVPLPDLPETYKSYLGCFAVVVGTKMHFVYNGIPLVQTFDSTDCTWTVEDYGWFCDI 240
            D+W+ LPDLP++  S + C  VVVG K+HF+Y G+P+VQTFDS +  WTVEDY WF  I
Sbjct: 181 KDVWIELPDLPQSCDSGI-CMGVVVGRKLHFIYKGLPIVQTFDSVEWRWTVEDYNWFSHI 240

Query: 241 NAVVPFQDSLYIMSHGCIFKQDGRDYDFFAPAHEFNSRDRARMICFRGELYVIGGRIYFE 300
             +   +D +YIMS G IF Q G++      A +FN  D   MICFRGELYVIGG +Y +
Sbjct: 241 WLMTADRDVIYIMSQGYIFMQVGQNSKVVISADQFNLNDGMGMICFRGELYVIGGTLYTD 300

Query: 301 NDYENLSDVNVLTLGGN-EPSWVSATPMSRGSGVVLGCAELRI 342
            DYE LSDV+VLTL  N    WV+  PMSRG G VLGCA LR+
Sbjct: 301 RDYEYLSDVHVLTLCSNLRTCWVNTAPMSRGYGTVLGCAALRV 342

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BLAST of Sed0026373 vs. NCBI nr
Match: XP_008451325.1 (PREDICTED: F-box/kelch-repeat protein SKIP30-like [Cucumis melo] >XP_008451326.1 PREDICTED: F-box/kelch-repeat protein SKIP30-like [Cucumis melo] >XP_008451328.1 PREDICTED: F-box/kelch-repeat protein SKIP30-like [Cucumis melo] >XP_008451329.1 PREDICTED: F-box/kelch-repeat protein SKIP30-like [Cucumis melo])

HSP 1 Score: 429.1 bits (1102), Expect = 3.6e-116
Identity = 202/343 (58.89%), Postives = 248/343 (72.30%), Query Frame = 0


Query: 1   MSSLMEGLPDEVALRCLAFVPFYLHPKLELVSRSWRSVIRSGKIFKVREEVGSVEDLLFV 60
           MSSL+EGLP +VALRCLAFVPFYLHP LE V RSWR  I SG+I++VR E G  EDLLFV
Sbjct: 1   MSSLIEGLPRDVALRCLAFVPFYLHPTLEQVCRSWRDAICSGEIYRVRHECGKAEDLLFV 60

Query: 61  CCYDDDNTWQFFDPLRDLWITLPRLPSTRKSASSVVSISQKLFVLGGIFNDPLNPMSD-D 120
           CC+D++N WQF+DP+ + W+TLP LP  RK    VVS  QKLF+LGG+  +P++P +D D
Sbjct: 61  CCHDEENKWQFYDPIENFWVTLPELPGGRKHYFGVVSTYQKLFILGGLLINPIDPSADED 120

Query: 121 FACNEVWSFDPVTRNWLMQAPMLESRAVFACAVLDGKIIVVGGLDIKHEPTSKVEMYDPE 180
           F+CNEVWSF+P+TR W +QAPM E+R++FAC VLDG IIVVGG++ K E T K EMYDP 
Sbjct: 121 FSCNEVWSFNPMTRKWSIQAPMHEARSLFACGVLDGMIIVVGGMNKKFEATPKAEMYDPV 180

Query: 181 MDLWVPLPDLPETYKSYLGCFAVVVGTKMHFVYNGIPLVQTFDSTDCTWTVEDYGWFCDI 240
            D+W  LPDLP    S + C  VVVG KMHF+Y G+P+VQTFD+ +  WTVEDY WF  I
Sbjct: 181 KDVWTQLPDLPRICDSGI-CMGVVVGRKMHFIYKGLPIVQTFDTVEWKWTVEDYNWFSHI 240

Query: 241 NAVVPFQDSLYIMSHGCIFKQDGRDYDFFAPAHEFNSRDRARMICFRGELYVIGGRIYFE 300
             +   +D +YIMS G IF Q G D      A +F+  D   MICFRGELYVIGG +Y +
Sbjct: 241 WLMTADRDRIYIMSQGYIFLQIGLDSKVVISADQFHLNDGMGMICFRGELYVIGGTLYTD 300

Query: 301 NDYENLSDVNVLTLGGN-EPSWVSATPMSRGSGVVLGCAELRI 342
           +DYE LSDV+VLTL  +    W+   PMSRG G VLGCA LR+
Sbjct: 301 HDYEYLSDVHVLTLSSDFRTCWIDIAPMSRGYGSVLGCAALRV 342

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BLAST of Sed0026373 vs. NCBI nr
Match: KAA0064055.1 (F-box/kelch-repeat protein SKIP30-like [Cucumis melo var. makuwa] >TYK26214.1 F-box/kelch-repeat protein SKIP30-like [Cucumis melo var. makuwa])

HSP 1 Score: 427.9 bits (1099), Expect = 8.0e-116
Identity = 202/343 (58.89%), Postives = 247/343 (72.01%), Query Frame = 0


Query: 1   MSSLMEGLPDEVALRCLAFVPFYLHPKLELVSRSWRSVIRSGKIFKVREEVGSVEDLLFV 60
           MSSL+EGLP +VALRCLAFVPFYLHP LE V RSWR  I SG+I++VR E G  EDLLFV
Sbjct: 1   MSSLIEGLPRDVALRCLAFVPFYLHPTLEQVCRSWRDAICSGEIYRVRHECGKAEDLLFV 60

Query: 61  CCYDDDNTWQFFDPLRDLWITLPRLPSTRKSASSVVSISQKLFVLGGIFNDPLNPMSD-D 120
           CC+D++N WQF+DP+ + W+TLP LP  RK    VVS  QKLF+LGG+  +P++P +D D
Sbjct: 61  CCHDEENKWQFYDPIENFWVTLPELPGGRKHYFGVVSTYQKLFILGGLLINPIDPSADED 120

Query: 121 FACNEVWSFDPVTRNWLMQAPMLESRAVFACAVLDGKIIVVGGLDIKHEPTSKVEMYDPE 180
           F+CNEVWSF+P+TR W +QAPM E+R++FAC VLDG IIVVGG++ K E T K EMYDP 
Sbjct: 121 FSCNEVWSFNPMTRKWSIQAPMHEARSLFACGVLDGMIIVVGGMNKKFEATPKAEMYDPV 180

Query: 181 MDLWVPLPDLPETYKSYLGCFAVVVGTKMHFVYNGIPLVQTFDSTDCTWTVEDYGWFCDI 240
            D+W  LPDLP    S + C  VVVG KMHF+Y G+P+VQTFD+ +  WTVEDY WF  I
Sbjct: 181 KDVWTQLPDLPRICDSGI-CMGVVVGRKMHFIYKGLPIVQTFDTVEWKWTVEDYNWFSHI 240

Query: 241 NAVVPFQDSLYIMSHGCIFKQDGRDYDFFAPAHEFNSRDRARMICFRGELYVIGGRIYFE 300
             +   +D +YIMS G IF Q G D      A +F+  D   MICFRGELYVIGG +Y +
Sbjct: 241 WLMTADRDRIYIMSQGYIFLQIGLDSKVVISADQFHLNDGMGMICFRGELYVIGGTLYTD 300

Query: 301 NDYENLSDVNVLTLGGN-EPSWVSATPMSRGSGVVLGCAELRI 342
           +DYE LSDV+VLTL  +    W    PMSRG G VLGCA LR+
Sbjct: 301 HDYEYLSDVHVLTLSSDFRTCWTDIAPMSRGYGSVLGCAALRV 342

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BLAST of Sed0026373 vs. NCBI nr
Match: XP_011659773.1 (F-box/kelch-repeat protein SKIP30 [Cucumis sativus])

HSP 1 Score: 425.6 bits (1093), Expect = 3.9e-115
Identity = 198/343 (57.73%), Postives = 248/343 (72.30%), Query Frame = 0


Query: 1   MSSLMEGLPDEVALRCLAFVPFYLHPKLELVSRSWRSVIRSGKIFKVREEVGSVEDLLFV 60
           MSSL+EGLP +VALRCLAFVPFYLH  LE V  SWR  I SG+I+KVR E G+ EDLLFV
Sbjct: 40  MSSLIEGLPHDVALRCLAFVPFYLHATLEQVCHSWRDAICSGEIYKVRSECGTAEDLLFV 99

Query: 61  CCYDDDNTWQFFDPLRDLWITLPRLPSTRKSASSVVSISQKLFVLGGIFNDPLNP-MSDD 120
           CC+D++N WQF+DP+ + W+TLP LP  RK    VVS  QKLF+LGG+  + ++P + +D
Sbjct: 100 CCHDEENKWQFYDPIENFWVTLPELPGGRKHYFGVVSTHQKLFILGGLLINAIDPSIDED 159

Query: 121 FACNEVWSFDPVTRNWLMQAPMLESRAVFACAVLDGKIIVVGGLDIKHEPTSKVEMYDPE 180
           F+CNEVWSF+P+TR W +QAPM E+R++FAC +LDG IIVVGG++ K E T K EMYDP 
Sbjct: 160 FSCNEVWSFNPMTRKWSIQAPMHEARSLFACGILDGMIIVVGGMNKKFESTPKAEMYDPV 219

Query: 181 MDLWVPLPDLPETYKSYLGCFAVVVGTKMHFVYNGIPLVQTFDSTDCTWTVEDYGWFCDI 240
            D+W+ LPDLP    S + C  VVVG KMHF+Y G+P+VQTFD+ +  WT+EDY WF  I
Sbjct: 220 KDVWIQLPDLPRICDSGI-CMGVVVGRKMHFIYKGLPIVQTFDTVEWRWTIEDYNWFSHI 279

Query: 241 NAVVPFQDSLYIMSHGCIFKQDGRDYDFFAPAHEFNSRDRARMICFRGELYVIGGRIYFE 300
             +   +D +YIMS G IF Q G+D      A +FN  D   MICFRGELYVIGG +Y +
Sbjct: 280 WLMTADRDRIYIMSQGYIFLQIGQDSKVVISADQFNLNDGMGMICFRGELYVIGGTLYTD 339

Query: 301 NDYENLSDVNVLTLGGN-EPSWVSATPMSRGSGVVLGCAELRI 342
            DYE LSDV+VLTL  +    W++  PMSRG G VLGCA LR+
Sbjct: 340 RDYEYLSDVHVLTLSSDFRTCWITIAPMSRGYGSVLGCAALRV 381

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BLAST of Sed0026373 vs. NCBI nr
Match: KGN44795.1 (hypothetical protein Csa_015560 [Cucumis sativus])

HSP 1 Score: 425.6 bits (1093), Expect = 3.9e-115
Identity = 198/343 (57.73%), Postives = 248/343 (72.30%), Query Frame = 0


Query: 1   MSSLMEGLPDEVALRCLAFVPFYLHPKLELVSRSWRSVIRSGKIFKVREEVGSVEDLLFV 60
           MSSL+EGLP +VALRCLAFVPFYLH  LE V  SWR  I SG+I+KVR E G+ EDLLFV
Sbjct: 1   MSSLIEGLPHDVALRCLAFVPFYLHATLEQVCHSWRDAICSGEIYKVRSECGTAEDLLFV 60

Query: 61  CCYDDDNTWQFFDPLRDLWITLPRLPSTRKSASSVVSISQKLFVLGGIFNDPLNP-MSDD 120
           CC+D++N WQF+DP+ + W+TLP LP  RK    VVS  QKLF+LGG+  + ++P + +D
Sbjct: 61  CCHDEENKWQFYDPIENFWVTLPELPGGRKHYFGVVSTHQKLFILGGLLINAIDPSIDED 120

Query: 121 FACNEVWSFDPVTRNWLMQAPMLESRAVFACAVLDGKIIVVGGLDIKHEPTSKVEMYDPE 180
           F+CNEVWSF+P+TR W +QAPM E+R++FAC +LDG IIVVGG++ K E T K EMYDP 
Sbjct: 121 FSCNEVWSFNPMTRKWSIQAPMHEARSLFACGILDGMIIVVGGMNKKFESTPKAEMYDPV 180

Query: 181 MDLWVPLPDLPETYKSYLGCFAVVVGTKMHFVYNGIPLVQTFDSTDCTWTVEDYGWFCDI 240
            D+W+ LPDLP    S + C  VVVG KMHF+Y G+P+VQTFD+ +  WT+EDY WF  I
Sbjct: 181 KDVWIQLPDLPRICDSGI-CMGVVVGRKMHFIYKGLPIVQTFDTVEWRWTIEDYNWFSHI 240

Query: 241 NAVVPFQDSLYIMSHGCIFKQDGRDYDFFAPAHEFNSRDRARMICFRGELYVIGGRIYFE 300
             +   +D +YIMS G IF Q G+D      A +FN  D   MICFRGELYVIGG +Y +
Sbjct: 241 WLMTADRDRIYIMSQGYIFLQIGQDSKVVISADQFNLNDGMGMICFRGELYVIGGTLYTD 300

Query: 301 NDYENLSDVNVLTLGGN-EPSWVSATPMSRGSGVVLGCAELRI 342
            DYE LSDV+VLTL  +    W++  PMSRG G VLGCA LR+
Sbjct: 301 RDYEYLSDVHVLTLSSDFRTCWITIAPMSRGYGSVLGCAALRV 342

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BLAST of Sed0026373 vs. ExPASy Swiss-Prot
Match: Q9M1W7 (F-box/kelch-repeat protein SKIP30 OS=Arabidopsis thaliana OX=3702 GN=SKIP30 PE=1 SV=2)

HSP 1 Score: 310.8 bits (795), Expect = 1.9e-83
Identity = 158/350 (45.14%), Postives = 218/350 (62.29%), Query Frame = 0


Query: 1   MSSLMEGLPDEVALRCLAFVPFYLHPKLELVSRSWRSVIRSGKIFKVREEVGSVEDLLFV 60
           MS L++G+P+ VALRCLA VP +LHP LELVSRSWR+ IRS ++F+VR+E+ S E LL V
Sbjct: 8   MSGLLDGIPEAVALRCLAHVPLHLHPNLELVSRSWRAAIRSHELFRVRKELRSSEHLLCV 67

Query: 61  CCYDDDNTWQFFDPLRDLWITLPRLPSTRKSAS--SVVSISQKLFVLGGIFNDPLNPMSD 120
           C +D +N WQ + P  D W+TLP LPS  +  +    V+ +  LFVLGG  +D ++P++ 
Sbjct: 68  CAFDPENIWQVYSPNCDRWLTLPLLPSRIRHLAHFGAVTTAGMLFVLGG-GSDAVSPVTG 127

Query: 121 D----FACNEVWSFDPVTRNWLMQAPMLESRAVFACAVLDGKIIVVGGLDIKHEPTSKVE 180
           D    FA ++VWS+D V R W  +A ML  RA+FAC VL GKI+V GG     +  S  E
Sbjct: 128 DHDGTFATDQVWSYDFVQRQWTPRASMLVPRAMFACCVLQGKIVVAGGFTTCRKSISGAE 187

Query: 181 MYDPEMDLWVPLPDLPETYKSYLGCFAVVVGTKMHFVYNGIPLVQTFDSTDCTWTVEDYG 240
           MYDPE D+W  +PDL +T+ S   C  +VV  K+H ++ G+  VQ  +S    W V+DYG
Sbjct: 188 MYDPENDVWTSIPDLHQTHNS--ACSGLVVNGKVHVLHKGLSTVQVLESVKLGWDVKDYG 247

Query: 241 WFCDINAVVPFQDSLYIMSHGCIFKQDGRDYDFFAPAHEFNSRDRARMICFRGELYVIGG 300
           W      +V  +D LY+MSHG +FKQ+G  +   A A EF  R    M     E+ ++GG
Sbjct: 248 W--PQGPMVVVEDVLYVMSHGLVFKQEGDTWKMVASASEFKRRIGMAMTSLSDEVLIVGG 307

Query: 301 RIYFEN---DYENLSDVNVLTLGGNEPSWVSATPMSRGSGVVLGCAELRI 342
            I  +    D + LSDV+ LT+G + P+W S  PM+R  G +LGC +L I
Sbjct: 308 VIGPDRLNWDIKPLSDVDALTVGNDRPAWRSVAPMTRCRGTILGCTQLTI 352

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BLAST of Sed0026373 vs. ExPASy Swiss-Prot
Match: Q0WW40 (F-box/kelch-repeat protein At1g16250 OS=Arabidopsis thaliana OX=3702 GN=At1g16250 PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 5.3e-30
Identity = 98/323 (30.34%), Postives = 138/323 (42.72%), Query Frame = 0


Query: 3   SLMEGLPDEVALRCLAFVPFYLHPKLELVSRSWRSVIRSGKIFKVREEVGSVEDLLFVCC 62
           S++ GLPD++ALRC+A +    H  LE VSR WR ++R       +   G     LFV  
Sbjct: 7   SIIPGLPDDLALRCIAKLSHGYHGVLECVSRGWRDLVRGADYSCYKARNGWSGSWLFVLT 66

Query: 63  YDDDNTWQFFDPLRDLWITLPRLPSTR----KSASSVVSISQKLFVLGGIFNDPLN--PM 122
               N W  +DP  D W  LPR  + +     S  + V +S  L V+GG +   ++  P 
Sbjct: 67  ERSKNQWVAYDPEADRWHPLPRTRAVQDGWHHSGFACVCVSNCLLVIGGCYAPSVSSFPH 126

Query: 123 SDDFACNEVWSFDPVTRNWLMQAPMLESRAVFACAVLDGKIIVVGGLDIKH-EPTSKVEM 182
                  +V  FDP  + W M A M   R  FAC  + GK+ V GG ++ H       E+
Sbjct: 127 QKPVVTKDVMRFDPFKKQWKMVASMRTPRTHFACTSVSGKVYVAGGRNLTHSRGIPSAEV 186

Query: 183 YDPEMDLWVPLPDLPETYK-----SYLGCFAVVVGTKMHFVYNGIPLVQTFDSTDCTW-T 242
           YDP  D W  LP +P         SY GCF V+         N     + F+  D TW T
Sbjct: 187 YDPVADRWEELPAMPRPQMDCSGLSYRGCFHVLSDQVGFAEQNS---SEVFNPRDMTWST 246

Query: 243 VEDYGWF---CDINAVVPFQDSLYIM---SHGCIFKQDGRDYDFF----APAHEFNSRDR 297
           VED   F         V   D +Y +       I  +D  + +++     P+    +  R
Sbjct: 247 VEDVWPFSRAMQFAVQVMKNDRVYTIVDWGESLIKTRDTDEGEWYNVGSVPSVVLPNHPR 306

[Close]

BLAST of Sed0026373 vs. ExPASy Swiss-Prot
Match: Q9CAG8 (F-box/kelch-repeat protein At1g67480 OS=Arabidopsis thaliana OX=3702 GN=At1g67480 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.0e-25
Identity = 74/237 (31.22%), Postives = 114/237 (48.10%), Query Frame = 0


Query: 4   LMEGLPDEVALRCLAFVPFYLHPKLELVSRSWRSVIRSGKIFKVREEVGSVEDLLFVCCY 63
           L+ GLPD+VA +CLA VP    P +  V + WR V++S +   VR   G +E+ L+V   
Sbjct: 39  LIPGLPDDVAKQCLALVPRARFPSMGSVCKKWRFVVQSKEFITVRRLAGMLEEWLYVLTM 98

Query: 64  D---DDNTWQFFDPLRDLWITLPRLPSTRKSASSVVSISQKLFVLGG--IFNDPLNPMSD 123
           +    DN W+  D L     +LP +P   K+   VV +  KL V+ G  + N  L     
Sbjct: 99  NAGGKDNRWEVMDCLGQKLSSLPPMPGPAKTGFKVVVVDGKLLVIAGCCMINGSL----- 158

Query: 124 DFACNEVWSFDPVTRNWLMQAPMLESRAVFACAVLDGKIIVVGGLDIKHEPTSKVEMYDP 183
             A  +V+ +D    +W   A +  +R  FACA ++G + VVGG  +  E  S  E+YDP
Sbjct: 159 -VASADVYQYDTCLNSWSRLADLEVARYDFACAEVNGHVYVVGGHGVDGESLSSAEVYDP 218

Query: 184 EMDLWVPLPDLPETYKSYLGCFA-------VVVGTKMHFVYNGIPLVQTFDSTDCTW 229
           E   W  +  L    +   GCFA        V+G + +F      L+  +++   +W
Sbjct: 219 ETCTWTFIESL---RRPRWGCFASAFNGKLYVMGGRSNFTIGNSKLLDVYNTQCGSW 266

[Close]

BLAST of Sed0026373 vs. ExPASy Swiss-Prot
Match: Q9LM55 (F-box/kelch-repeat protein At1g22040 OS=Arabidopsis thaliana OX=3702 GN=At1g22040 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 4.8e-23
Identity = 65/224 (29.02%), Postives = 104/224 (46.43%), Query Frame = 0


Query: 4   LMEGLPDEVALRCLAFVPFYLHPKLELVSRSWRSVIRSGKIFKVREEVGSVEDLLFVCC- 63
           L+  LPDE++++ LA +P   +  + LVSR WRS + + +++ +R+E+G  E+ L+V   
Sbjct: 43  LIPSLPDELSIQILARLPRICYSSVRLVSRRWRSAVSTSEVYSLRKELGRTEEWLYVLTK 102

Query: 64  -YDDDNTWQFFDPLRDLWITLPRLP------STRKSASSVVSISQKLFVLGGIFND---- 123
            ++D   W   DP+   W  LP +P       +RKS S + ++    F +G I       
Sbjct: 103 GHEDKLLWYALDPVSTKWQRLPPMPVVVYEEESRKSLSGLWNMITPSFNVGAIVRSFLGR 162

Query: 124 ----------------------PLNPMSDDFACNEVWSFDPVTRNWLMQAPMLESRAVFA 183
                                  +  +S     + VW FDP+  +W   + ML SRA   
Sbjct: 163 RDSSEQMPFCGCAIGAVDGGLYVIGGLSRSKTVSCVWRFDPILNSWSEVSSMLASRAYSK 222

Query: 184 CAVLDGKIIVVGGLDIKH---EPTSKVEMYDPEMDLWVPLPDLP 191
             VL+ K+ VVGG+D       P    E+YDP  D W  +P +P
Sbjct: 223 TGVLNKKLYVVGGVDRGRGGLSPLQSAEVYDPSTDAWSEVPSMP 266

[Close]

BLAST of Sed0026373 vs. ExPASy Swiss-Prot
Match: Q9FKJ0 (F-box/kelch-repeat protein At5g60570 OS=Arabidopsis thaliana OX=3702 GN=At5g60570 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 3.1e-22
Identity = 63/202 (31.19%), Postives = 100/202 (49.50%), Query Frame = 0


Query: 3   SLMEGLPDEVALRCLAFVPFYLHPKLELVSRSWRSVIRSGKIFKVREEVGSVEDLLFVCC 62
           S++ GL D+VAL CLA+VP   +P L  V++ +  +I SG +F +R+E+G VE L+F+ C
Sbjct: 48  SVLPGLIDDVALNCLAWVPRSDYPSLSCVNKKYNKLINSGHLFALRKELGIVEYLVFMVC 107

Query: 63  YDDDNTWQFFDPLRDLWITLPRLPST---RKSASSVVSISQKLFVLG-GIFNDPLNPMSD 122
             D   W  F P++  W+ LP++P       +    +++  +L V G  +F         
Sbjct: 108 --DPRGWLMFSPMKKKWMVLPKMPCDECFNHADKESLAVDDELLVFGRELF--------- 167

Query: 123 DFACNEVWSFDPVTRNWLMQAPMLESRAVFACAVLDGKIIVVGGLDIKHEPTSKVEMYDP 182
            FA   +W +   +R W+    M   R +FA   L G  IV GG D+     +  E+YD 
Sbjct: 168 QFA---IWKYSLRSRCWVKCEGMHRPRCLFASGSLGGIAIVAGGTDMNGNILASAELYDS 227

Query: 183 EMDLWVPLPDLPETYKSYLGCF 201
               W  LP++    +   G F
Sbjct: 228 SSGRWEMLPNMHSPRRLCSGFF 235

[Close]

BLAST of Sed0026373 vs. ExPASy TrEMBL
Match: A0A1S3BR74 (F-box/kelch-repeat protein SKIP30-like OS=Cucumis melo OX=3656 GN=LOC103492651 PE=4 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 1.7e-116
Identity = 202/343 (58.89%), Postives = 248/343 (72.30%), Query Frame = 0


Query: 1   MSSLMEGLPDEVALRCLAFVPFYLHPKLELVSRSWRSVIRSGKIFKVREEVGSVEDLLFV 60
           MSSL+EGLP +VALRCLAFVPFYLHP LE V RSWR  I SG+I++VR E G  EDLLFV
Sbjct: 1   MSSLIEGLPRDVALRCLAFVPFYLHPTLEQVCRSWRDAICSGEIYRVRHECGKAEDLLFV 60

Query: 61  CCYDDDNTWQFFDPLRDLWITLPRLPSTRKSASSVVSISQKLFVLGGIFNDPLNPMSD-D 120
           CC+D++N WQF+DP+ + W+TLP LP  RK    VVS  QKLF+LGG+  +P++P +D D
Sbjct: 61  CCHDEENKWQFYDPIENFWVTLPELPGGRKHYFGVVSTYQKLFILGGLLINPIDPSADED 120

Query: 121 FACNEVWSFDPVTRNWLMQAPMLESRAVFACAVLDGKIIVVGGLDIKHEPTSKVEMYDPE 180
           F+CNEVWSF+P+TR W +QAPM E+R++FAC VLDG IIVVGG++ K E T K EMYDP 
Sbjct: 121 FSCNEVWSFNPMTRKWSIQAPMHEARSLFACGVLDGMIIVVGGMNKKFEATPKAEMYDPV 180

Query: 181 MDLWVPLPDLPETYKSYLGCFAVVVGTKMHFVYNGIPLVQTFDSTDCTWTVEDYGWFCDI 240
            D+W  LPDLP    S + C  VVVG KMHF+Y G+P+VQTFD+ +  WTVEDY WF  I
Sbjct: 181 KDVWTQLPDLPRICDSGI-CMGVVVGRKMHFIYKGLPIVQTFDTVEWKWTVEDYNWFSHI 240

Query: 241 NAVVPFQDSLYIMSHGCIFKQDGRDYDFFAPAHEFNSRDRARMICFRGELYVIGGRIYFE 300
             +   +D +YIMS G IF Q G D      A +F+  D   MICFRGELYVIGG +Y +
Sbjct: 241 WLMTADRDRIYIMSQGYIFLQIGLDSKVVISADQFHLNDGMGMICFRGELYVIGGTLYTD 300

Query: 301 NDYENLSDVNVLTLGGN-EPSWVSATPMSRGSGVVLGCAELRI 342
           +DYE LSDV+VLTL  +    W+   PMSRG G VLGCA LR+
Sbjct: 301 HDYEYLSDVHVLTLSSDFRTCWIDIAPMSRGYGSVLGCAALRV 342

[Close]

BLAST of Sed0026373 vs. ExPASy TrEMBL
Match: A0A5D3DRI4 (F-box/kelch-repeat protein SKIP30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G001440 PE=4 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 3.9e-116
Identity = 202/343 (58.89%), Postives = 247/343 (72.01%), Query Frame = 0


Query: 1   MSSLMEGLPDEVALRCLAFVPFYLHPKLELVSRSWRSVIRSGKIFKVREEVGSVEDLLFV 60
           MSSL+EGLP +VALRCLAFVPFYLHP LE V RSWR  I SG+I++VR E G  EDLLFV
Sbjct: 1   MSSLIEGLPRDVALRCLAFVPFYLHPTLEQVCRSWRDAICSGEIYRVRHECGKAEDLLFV 60

Query: 61  CCYDDDNTWQFFDPLRDLWITLPRLPSTRKSASSVVSISQKLFVLGGIFNDPLNPMSD-D 120
           CC+D++N WQF+DP+ + W+TLP LP  RK    VVS  QKLF+LGG+  +P++P +D D
Sbjct: 61  CCHDEENKWQFYDPIENFWVTLPELPGGRKHYFGVVSTYQKLFILGGLLINPIDPSADED 120

Query: 121 FACNEVWSFDPVTRNWLMQAPMLESRAVFACAVLDGKIIVVGGLDIKHEPTSKVEMYDPE 180
           F+CNEVWSF+P+TR W +QAPM E+R++FAC VLDG IIVVGG++ K E T K EMYDP 
Sbjct: 121 FSCNEVWSFNPMTRKWSIQAPMHEARSLFACGVLDGMIIVVGGMNKKFEATPKAEMYDPV 180

Query: 181 MDLWVPLPDLPETYKSYLGCFAVVVGTKMHFVYNGIPLVQTFDSTDCTWTVEDYGWFCDI 240
            D+W  LPDLP    S + C  VVVG KMHF+Y G+P+VQTFD+ +  WTVEDY WF  I
Sbjct: 181 KDVWTQLPDLPRICDSGI-CMGVVVGRKMHFIYKGLPIVQTFDTVEWKWTVEDYNWFSHI 240

Query: 241 NAVVPFQDSLYIMSHGCIFKQDGRDYDFFAPAHEFNSRDRARMICFRGELYVIGGRIYFE 300
             +   +D +YIMS G IF Q G D      A +F+  D   MICFRGELYVIGG +Y +
Sbjct: 241 WLMTADRDRIYIMSQGYIFLQIGLDSKVVISADQFHLNDGMGMICFRGELYVIGGTLYTD 300

Query: 301 NDYENLSDVNVLTLGGN-EPSWVSATPMSRGSGVVLGCAELRI 342
           +DYE LSDV+VLTL  +    W    PMSRG G VLGCA LR+
Sbjct: 301 HDYEYLSDVHVLTLSSDFRTCWTDIAPMSRGYGSVLGCAALRV 342

[Close]

BLAST of Sed0026373 vs. ExPASy TrEMBL
Match: A0A0A0K4Y2 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G387790 PE=4 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.9e-115
Identity = 198/343 (57.73%), Postives = 248/343 (72.30%), Query Frame = 0


Query: 1   MSSLMEGLPDEVALRCLAFVPFYLHPKLELVSRSWRSVIRSGKIFKVREEVGSVEDLLFV 60
           MSSL+EGLP +VALRCLAFVPFYLH  LE V  SWR  I SG+I+KVR E G+ EDLLFV
Sbjct: 1   MSSLIEGLPHDVALRCLAFVPFYLHATLEQVCHSWRDAICSGEIYKVRSECGTAEDLLFV 60

Query: 61  CCYDDDNTWQFFDPLRDLWITLPRLPSTRKSASSVVSISQKLFVLGGIFNDPLNP-MSDD 120
           CC+D++N WQF+DP+ + W+TLP LP  RK    VVS  QKLF+LGG+  + ++P + +D
Sbjct: 61  CCHDEENKWQFYDPIENFWVTLPELPGGRKHYFGVVSTHQKLFILGGLLINAIDPSIDED 120

Query: 121 FACNEVWSFDPVTRNWLMQAPMLESRAVFACAVLDGKIIVVGGLDIKHEPTSKVEMYDPE 180
           F+CNEVWSF+P+TR W +QAPM E+R++FAC +LDG IIVVGG++ K E T K EMYDP 
Sbjct: 121 FSCNEVWSFNPMTRKWSIQAPMHEARSLFACGILDGMIIVVGGMNKKFESTPKAEMYDPV 180

Query: 181 MDLWVPLPDLPETYKSYLGCFAVVVGTKMHFVYNGIPLVQTFDSTDCTWTVEDYGWFCDI 240
            D+W+ LPDLP    S + C  VVVG KMHF+Y G+P+VQTFD+ +  WT+EDY WF  I
Sbjct: 181 KDVWIQLPDLPRICDSGI-CMGVVVGRKMHFIYKGLPIVQTFDTVEWRWTIEDYNWFSHI 240

Query: 241 NAVVPFQDSLYIMSHGCIFKQDGRDYDFFAPAHEFNSRDRARMICFRGELYVIGGRIYFE 300
             +   +D +YIMS G IF Q G+D      A +FN  D   MICFRGELYVIGG +Y +
Sbjct: 241 WLMTADRDRIYIMSQGYIFLQIGQDSKVVISADQFNLNDGMGMICFRGELYVIGGTLYTD 300

Query: 301 NDYENLSDVNVLTLGGN-EPSWVSATPMSRGSGVVLGCAELRI 342
            DYE LSDV+VLTL  +    W++  PMSRG G VLGCA LR+
Sbjct: 301 RDYEYLSDVHVLTLSSDFRTCWITIAPMSRGYGSVLGCAALRV 342

[Close]

BLAST of Sed0026373 vs. ExPASy TrEMBL
Match: A0A6J1D7Q9 (F-box/kelch-repeat protein SKIP30-like OS=Momordica charantia OX=3673 GN=LOC111018411 PE=4 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 2.8e-106
Identity = 204/351 (58.12%), Postives = 242/351 (68.95%), Query Frame = 0


Query: 1   MSSLMEGLPDEVALRCLAFVPFYLHPKLELVSRSWRSVIRSGKIFKVREEVGSVEDLLFV 60
           MS L+EGLPD +ALRCLA VP+YLHPKLELVSRSW++  RS ++F+ R+EVGS EDLL V
Sbjct: 1   MSGLIEGLPDAIALRCLARVPYYLHPKLELVSRSWKAAFRSAELFRARQEVGSSEDLLCV 60

Query: 61  CCYDDDNTWQFFDPLRDLWITLPRLPSTRKSAS--SVVSISQKLFVLGGIFNDPLNPMS- 120
           C YD +NTWQ +DPLRDLWITLP LPS R+  S     S SQ LFVLGG  +D ++P++ 
Sbjct: 61  CSYDPNNTWQLYDPLRDLWITLPELPSKRRHLSHFGAASTSQYLFVLGG-RSDAIDPLTG 120

Query: 121 ---DDFACNEVWSFDPVTRNWLMQAPMLESRAVFACAVLDGKIIVVGGLDIKHEPTSKVE 180
              D+ + NEVWSFDPVTRNWLM+APML  RA+FAC VL+GKIIV GG     + TSK E
Sbjct: 121 DHDDNLSTNEVWSFDPVTRNWLMRAPMLVPRAMFACCVLEGKIIVAGGFTSTSKSTSKTE 180

Query: 181 MYDPEMDLWVPLPDLPETYKSYLGCFAVVVGTKMHFVYNGIPLVQTFDSTDCTWTVEDYG 240
           +YD E DLWVPLPDL +T+ S   C  VV+G K+H +Y G   VQ FD+ +  W VEDYG
Sbjct: 181 IYDSEKDLWVPLPDLLQTHDS--TCIGVVIGGKVHIMYKGQSTVQIFDTLELKWRVEDYG 240

Query: 241 WFCDINAVVPFQDSLYIMSHGCIFKQDGRDYDFFAPA-HEFNSRDRARMICFRGELYVIG 300
           W     A V  QDSLY+M  G IFKQDGRD     PA  +F  R    MI FRGELYVIG
Sbjct: 241 WLPGPMAAV--QDSLYVMCLGLIFKQDGRDRQVVIPAVSQFLHRIGMAMIGFRGELYVIG 300

Query: 301 G---RIYFENDYENLSDVNVLTLGGNEPSWVSATPMSRGSGVVLGCAELRI 342
           G    +  + D   LSDV+VL L G +P+W    PMSR  G VLGC ELRI
Sbjct: 301 GVVRPVRLDADLVKLSDVHVLNLRGEKPTWYCVAPMSRCHGTVLGCTELRI 346

[Close]

BLAST of Sed0026373 vs. ExPASy TrEMBL
Match: A0A6J1GPT2 (F-box/kelch-repeat protein SKIP30-like OS=Cucurbita moschata OX=3662 GN=LOC111456033 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 4.6e-101
Identity = 191/350 (54.57%), Postives = 238/350 (68.00%), Query Frame = 0


Query: 1   MSSLMEGLPDEVALRCLAFVPFYLHPKLELVSRSWRSVIRSGKIFKVREEVGSVEDLLFV 60
           MS L+EGLPD +++RCLAFVP+YLHPKLELVSRSW++ IRS ++F+ R+EVGS EDLL V
Sbjct: 1   MSGLIEGLPDAISIRCLAFVPYYLHPKLELVSRSWKAAIRSTELFRARQEVGSSEDLLCV 60

Query: 61  CCYDDDNTWQFFDPLRDLWITLPRLPS--TRKSASSVVSISQKLFVLGGIFNDPLNPMS- 120
           C YD +NTWQ +DPL++LW+TLP LPS  T  +   VVS SQKLFVLGG   D ++P++ 
Sbjct: 61  CSYDPNNTWQLYDPLQNLWMTLPELPSKITHLANFGVVSTSQKLFVLGG-RGDAVDPVTG 120

Query: 121 ---DDFACNEVWSFDPVTRNWLMQAPMLESRAVFACAVLDGKIIVVGGLDIKHEPTSKVE 180
              D+ + NEVWSFDPVTR W M+APML  R  FAC V+DGKI+V GG     + TS+ E
Sbjct: 121 DREDNSSTNEVWSFDPVTRTWSMRAPMLVPRYTFACCVVDGKIVVAGGFTSLSKSTSQAE 180

Query: 181 MYDPEMDLWVPLPDLPETYKSYLGCFAVVVGTKMHFVYNGIPLVQTFDSTDCTWTVEDYG 240
           MYD E D+W+PLPDL  T+ S   C  +++G KMH +Y G+  VQ FDS +  W VEDYG
Sbjct: 181 MYDNEKDVWIPLPDLLHTHDS--TCIGLMIGGKMHVMYGGVSTVQVFDSLELKWRVEDYG 240

Query: 241 WFCDINAVVPFQDSLYIMSHGCIFKQDGRDYDFFAPAHEFNSRDRARMICFRGELYVIGG 300
           W     AVV    SLY MS G +FKQ+ RD      A +F  R    ++ FRGELYVIGG
Sbjct: 241 WLPGHKAVV--GGSLYTMSQGLVFKQEERDAQAVVSASQFVQRIGMAIVGFRGELYVIGG 300

Query: 301 RI---YFENDYENLSDVNVLTLGGNEPSWVSATPMSRGSGVVLGCAELRI 342
            +    F+ D   LSDV+VL +   +PSW  A PMSR SG VLGC   RI
Sbjct: 301 VVRPERFDGDLVKLSDVHVLKVRNEKPSWYCAAPMSRCSGTVLGCTVWRI 345

[Close]

BLAST of Sed0026373 vs. TAIR 10
Match: AT3G63220.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 310.8 bits (795), Expect = 1.3e-84
Identity = 158/350 (45.14%), Postives = 218/350 (62.29%), Query Frame = 0


Query: 1   MSSLMEGLPDEVALRCLAFVPFYLHPKLELVSRSWRSVIRSGKIFKVREEVGSVEDLLFV 60
           MS L++G+P+ VALRCLA VP +LHP LELVSRSWR+ IRS ++F+VR+E+ S E LL V
Sbjct: 1   MSGLLDGIPEAVALRCLAHVPLHLHPNLELVSRSWRAAIRSHELFRVRKELRSSEHLLCV 60

Query: 61  CCYDDDNTWQFFDPLRDLWITLPRLPSTRKSAS--SVVSISQKLFVLGGIFNDPLNPMSD 120
           C +D +N WQ + P  D W+TLP LPS  +  +    V+ +  LFVLGG  +D ++P++ 
Sbjct: 61  CAFDPENIWQVYSPNCDRWLTLPLLPSRIRHLAHFGAVTTAGMLFVLGG-GSDAVSPVTG 120

Query: 121 D----FACNEVWSFDPVTRNWLMQAPMLESRAVFACAVLDGKIIVVGGLDIKHEPTSKVE 180
           D    FA ++VWS+D V R W  +A ML  RA+FAC VL GKI+V GG     +  S  E
Sbjct: 121 DHDGTFATDQVWSYDFVQRQWTPRASMLVPRAMFACCVLQGKIVVAGGFTTCRKSISGAE 180

Query: 181 MYDPEMDLWVPLPDLPETYKSYLGCFAVVVGTKMHFVYNGIPLVQTFDSTDCTWTVEDYG 240
           MYDPE D+W  +PDL +T+ S   C  +VV  K+H ++ G+  VQ  +S    W V+DYG
Sbjct: 181 MYDPENDVWTSIPDLHQTHNS--ACSGLVVNGKVHVLHKGLSTVQVLESVKLGWDVKDYG 240

Query: 241 WFCDINAVVPFQDSLYIMSHGCIFKQDGRDYDFFAPAHEFNSRDRARMICFRGELYVIGG 300
           W      +V  +D LY+MSHG +FKQ+G  +   A A EF  R    M     E+ ++GG
Sbjct: 241 W--PQGPMVVVEDVLYVMSHGLVFKQEGDTWKMVASASEFKRRIGMAMTSLSDEVLIVGG 300

Query: 301 RIYFEN---DYENLSDVNVLTLGGNEPSWVSATPMSRGSGVVLGCAELRI 342
            I  +    D + LSDV+ LT+G + P+W S  PM+R  G +LGC +L I
Sbjct: 301 VIGPDRLNWDIKPLSDVDALTVGNDRPAWRSVAPMTRCRGTILGCTQLTI 345

[Close]

BLAST of Sed0026373 vs. TAIR 10
Match: AT3G63220.2 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 310.8 bits (795), Expect = 1.3e-84
Identity = 158/350 (45.14%), Postives = 218/350 (62.29%), Query Frame = 0


Query: 1   MSSLMEGLPDEVALRCLAFVPFYLHPKLELVSRSWRSVIRSGKIFKVREEVGSVEDLLFV 60
           MS L++G+P+ VALRCLA VP +LHP LELVSRSWR+ IRS ++F+VR+E+ S E LL V
Sbjct: 8   MSGLLDGIPEAVALRCLAHVPLHLHPNLELVSRSWRAAIRSHELFRVRKELRSSEHLLCV 67

Query: 61  CCYDDDNTWQFFDPLRDLWITLPRLPSTRKSAS--SVVSISQKLFVLGGIFNDPLNPMSD 120
           C +D +N WQ + P  D W+TLP LPS  +  +    V+ +  LFVLGG  +D ++P++ 
Sbjct: 68  CAFDPENIWQVYSPNCDRWLTLPLLPSRIRHLAHFGAVTTAGMLFVLGG-GSDAVSPVTG 127

Query: 121 D----FACNEVWSFDPVTRNWLMQAPMLESRAVFACAVLDGKIIVVGGLDIKHEPTSKVE 180
           D    FA ++VWS+D V R W  +A ML  RA+FAC VL GKI+V GG     +  S  E
Sbjct: 128 DHDGTFATDQVWSYDFVQRQWTPRASMLVPRAMFACCVLQGKIVVAGGFTTCRKSISGAE 187

Query: 181 MYDPEMDLWVPLPDLPETYKSYLGCFAVVVGTKMHFVYNGIPLVQTFDSTDCTWTVEDYG 240
           MYDPE D+W  +PDL +T+ S   C  +VV  K+H ++ G+  VQ  +S    W V+DYG
Sbjct: 188 MYDPENDVWTSIPDLHQTHNS--ACSGLVVNGKVHVLHKGLSTVQVLESVKLGWDVKDYG 247

Query: 241 WFCDINAVVPFQDSLYIMSHGCIFKQDGRDYDFFAPAHEFNSRDRARMICFRGELYVIGG 300
           W      +V  +D LY+MSHG +FKQ+G  +   A A EF  R    M     E+ ++GG
Sbjct: 248 W--PQGPMVVVEDVLYVMSHGLVFKQEGDTWKMVASASEFKRRIGMAMTSLSDEVLIVGG 307

Query: 301 RIYFEN---DYENLSDVNVLTLGGNEPSWVSATPMSRGSGVVLGCAELRI 342
            I  +    D + LSDV+ LT+G + P+W S  PM+R  G +LGC +L I
Sbjct: 308 VIGPDRLNWDIKPLSDVDALTVGNDRPAWRSVAPMTRCRGTILGCTQLTI 352

[Close]

BLAST of Sed0026373 vs. TAIR 10
Match: AT1G16250.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 133.3 bits (334), Expect = 3.8e-31
Identity = 98/323 (30.34%), Postives = 138/323 (42.72%), Query Frame = 0


Query: 3   SLMEGLPDEVALRCLAFVPFYLHPKLELVSRSWRSVIRSGKIFKVREEVGSVEDLLFVCC 62
           S++ GLPD++ALRC+A +    H  LE VSR WR ++R       +   G     LFV  
Sbjct: 7   SIIPGLPDDLALRCIAKLSHGYHGVLECVSRGWRDLVRGADYSCYKARNGWSGSWLFVLT 66

Query: 63  YDDDNTWQFFDPLRDLWITLPRLPSTR----KSASSVVSISQKLFVLGGIFNDPLN--PM 122
               N W  +DP  D W  LPR  + +     S  + V +S  L V+GG +   ++  P 
Sbjct: 67  ERSKNQWVAYDPEADRWHPLPRTRAVQDGWHHSGFACVCVSNCLLVIGGCYAPSVSSFPH 126

Query: 123 SDDFACNEVWSFDPVTRNWLMQAPMLESRAVFACAVLDGKIIVVGGLDIKH-EPTSKVEM 182
                  +V  FDP  + W M A M   R  FAC  + GK+ V GG ++ H       E+
Sbjct: 127 QKPVVTKDVMRFDPFKKQWKMVASMRTPRTHFACTSVSGKVYVAGGRNLTHSRGIPSAEV 186

Query: 183 YDPEMDLWVPLPDLPETYK-----SYLGCFAVVVGTKMHFVYNGIPLVQTFDSTDCTW-T 242
           YDP  D W  LP +P         SY GCF V+         N     + F+  D TW T
Sbjct: 187 YDPVADRWEELPAMPRPQMDCSGLSYRGCFHVLSDQVGFAEQNS---SEVFNPRDMTWST 246

Query: 243 VEDYGWF---CDINAVVPFQDSLYIM---SHGCIFKQDGRDYDFF----APAHEFNSRDR 297
           VED   F         V   D +Y +       I  +D  + +++     P+    +  R
Sbjct: 247 VEDVWPFSRAMQFAVQVMKNDRVYTIVDWGESLIKTRDTDEGEWYNVGSVPSVVLPNHPR 306

[Close]

BLAST of Sed0026373 vs. TAIR 10
Match: AT1G67480.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 119.0 bits (297), Expect = 7.4e-27
Identity = 74/237 (31.22%), Postives = 114/237 (48.10%), Query Frame = 0


Query: 4   LMEGLPDEVALRCLAFVPFYLHPKLELVSRSWRSVIRSGKIFKVREEVGSVEDLLFVCCY 63
           L+ GLPD+VA +CLA VP    P +  V + WR V++S +   VR   G +E+ L+V   
Sbjct: 39  LIPGLPDDVAKQCLALVPRARFPSMGSVCKKWRFVVQSKEFITVRRLAGMLEEWLYVLTM 98

Query: 64  D---DDNTWQFFDPLRDLWITLPRLPSTRKSASSVVSISQKLFVLGG--IFNDPLNPMSD 123
           +    DN W+  D L     +LP +P   K+   VV +  KL V+ G  + N  L     
Sbjct: 99  NAGGKDNRWEVMDCLGQKLSSLPPMPGPAKTGFKVVVVDGKLLVIAGCCMINGSL----- 158

Query: 124 DFACNEVWSFDPVTRNWLMQAPMLESRAVFACAVLDGKIIVVGGLDIKHEPTSKVEMYDP 183
             A  +V+ +D    +W   A +  +R  FACA ++G + VVGG  +  E  S  E+YDP
Sbjct: 159 -VASADVYQYDTCLNSWSRLADLEVARYDFACAEVNGHVYVVGGHGVDGESLSSAEVYDP 218

Query: 184 EMDLWVPLPDLPETYKSYLGCFA-------VVVGTKMHFVYNGIPLVQTFDSTDCTW 229
           E   W  +  L    +   GCFA        V+G + +F      L+  +++   +W
Sbjct: 219 ETCTWTFIESL---RRPRWGCFASAFNGKLYVMGGRSNFTIGNSKLLDVYNTQCGSW 266

[Close]

BLAST of Sed0026373 vs. TAIR 10
Match: AT1G67480.2 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 119.0 bits (297), Expect = 7.4e-27
Identity = 74/237 (31.22%), Postives = 114/237 (48.10%), Query Frame = 0


Query: 4   LMEGLPDEVALRCLAFVPFYLHPKLELVSRSWRSVIRSGKIFKVREEVGSVEDLLFVCCY 63
           L+ GLPD+VA +CLA VP    P +  V + WR V++S +   VR   G +E+ L+V   
Sbjct: 39  LIPGLPDDVAKQCLALVPRARFPSMGSVCKKWRFVVQSKEFITVRRLAGMLEEWLYVLTM 98

Query: 64  D---DDNTWQFFDPLRDLWITLPRLPSTRKSASSVVSISQKLFVLGG--IFNDPLNPMSD 123
           +    DN W+  D L     +LP +P   K+   VV +  KL V+ G  + N  L     
Sbjct: 99  NAGGKDNRWEVMDCLGQKLSSLPPMPGPAKTGFKVVVVDGKLLVIAGCCMINGSL----- 158

Query: 124 DFACNEVWSFDPVTRNWLMQAPMLESRAVFACAVLDGKIIVVGGLDIKHEPTSKVEMYDP 183
             A  +V+ +D    +W   A +  +R  FACA ++G + VVGG  +  E  S  E+YDP
Sbjct: 159 -VASADVYQYDTCLNSWSRLADLEVARYDFACAEVNGHVYVVGGHGVDGESLSSAEVYDP 218

Query: 184 EMDLWVPLPDLPETYKSYLGCFA-------VVVGTKMHFVYNGIPLVQTFDSTDCTW 229
           E   W  +  L    +   GCFA        V+G + +F      L+  +++   +W
Sbjct: 219 ETCTWTFIESL---RRPRWGCFASAFNGKLYVMGGRSNFTIGNSKLLDVYNTQCGSW 266

The following BLAST results are available for this feature:

BLAST of Sed0026373 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896848.1	1.5e-119	60.64	F-box/kelch-repeat protein SKIP30-like [Benincasa hispida] >XP_038896849.1 F-box...	[more]
XP_008451325.1	3.6e-116	58.89	PREDICTED: F-box/kelch-repeat protein SKIP30-like [Cucumis melo] >XP_008451326.1...	[more]
KAA0064055.1	8.0e-116	58.89	F-box/kelch-repeat protein SKIP30-like [Cucumis melo var. makuwa] >TYK26214.1 F-...	[more]
XP_011659773.1	3.9e-115	57.73	F-box/kelch-repeat protein SKIP30 [Cucumis sativus]	[more]
KGN44795.1	3.9e-115	57.73	hypothetical protein Csa_015560 [Cucumis sativus]	[more]

BLAST of Sed0026373 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M1W7	1.9e-83	45.14	F-box/kelch-repeat protein SKIP30 OS=Arabidopsis thaliana OX=3702 GN=SKIP30 PE=1...	[more]
Q0WW40	5.3e-30	30.34	F-box/kelch-repeat protein At1g16250 OS=Arabidopsis thaliana OX=3702 GN=At1g1625...	[more]
Q9CAG8	1.0e-25	31.22	F-box/kelch-repeat protein At1g67480 OS=Arabidopsis thaliana OX=3702 GN=At1g6748...	[more]
Q9LM55	4.8e-23	29.02	F-box/kelch-repeat protein At1g22040 OS=Arabidopsis thaliana OX=3702 GN=At1g2204...	[more]
Q9FKJ0	3.1e-22	31.19	F-box/kelch-repeat protein At5g60570 OS=Arabidopsis thaliana OX=3702 GN=At5g6057...	[more]

BLAST of Sed0026373 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BR74	1.7e-116	58.89	F-box/kelch-repeat protein SKIP30-like OS=Cucumis melo OX=3656 GN=LOC103492651 P...	[more]
A0A5D3DRI4	3.9e-116	58.89	F-box/kelch-repeat protein SKIP30-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A0A0K4Y2	1.9e-115	57.73	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G387790 PE=4 ...	[more]
A0A6J1D7Q9	2.8e-106	58.12	F-box/kelch-repeat protein SKIP30-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1GPT2	4.6e-101	54.57	F-box/kelch-repeat protein SKIP30-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]

BLAST of Sed0026373 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G63220.1	1.3e-84	45.14	Galactose oxidase/kelch repeat superfamily protein	[more]
AT3G63220.2	1.3e-84	45.14	Galactose oxidase/kelch repeat superfamily protein	[more]
AT1G16250.1	3.8e-31	30.34	Galactose oxidase/kelch repeat superfamily protein	[more]
AT1G67480.1	7.4e-27	31.22	Galactose oxidase/kelch repeat superfamily protein	[more]
AT1G67480.2	7.4e-27	31.22	Galactose oxidase/kelch repeat superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006652	Kelch repeat type 1	SMART	SM00612	kelc_smart	coord: 288..335 e-value: 21.0 score: 0.1 coord: 101..155 e-value: 2.6E-4 score: 30.3 coord: 156..205 e-value: 0.0055 score: 25.9
IPR006652	Kelch repeat type 1	PFAM	PF01344	Kelch_1	coord: 93..141 e-value: 2.2E-4 score: 20.7 coord: 148..190 e-value: 1.5E-10 score: 40.4
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 8..48 e-value: 4.7E-5 score: 32.8
IPR015915	Kelch-type beta propeller	GENE3D	2.120.10.80		coord: 52..337 e-value: 1.1E-32 score: 115.2
IPR015915	Kelch-type beta propeller	SUPERFAMILY	117281	Kelch motif	coord: 57..327
None	No IPR available	PANTHER	PTHR24414	F-BOX/KELCH-REPEAT PROTEIN SKIP4	coord: 2..341
None	No IPR available	PANTHER	PTHR24414:SF40	F-BOX/KELCH-REPEAT PROTEIN SKIP30	coord: 2..341
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 3..47

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0026373.1	Sed0026373.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding