Sed0026350 (gene) Chayote v1

Overview


Name	Sed0026350
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein RALF-like 33
Location	LG03: 13347587 .. 13348695 (+)
RNA-Seq Expression	Sed0026350
Synteny	Sed0026350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCCACGACGGTTCCAAAAAAGAATCTAAAAGAATGGCATATTCGTAATTAAGTAGTAAAACTAAGGGCTTATTTTCTGACCACGTTCTAAATAAGTCTTCAGAGCTGGCCTCTTCACTGCTCGCTTATTCTGTGCAAAAAAAAAAAAAAAAACCAAGAACCCACCGACGAATCGCCGGAGCTTTCACCGGAGCTGAAGAAACCGTCAATTCCGAGAAGAATCGCGAGGAAAAAAGAGAGATCGAGAGCTCTATTCTGGCATGACAATGGCCGGATTCAACTCTCCGACCTTCTTCCTGATCTGCGCCGCCGTGTTCGTGGTCTTCACCTGCTCCTCCACCGCCGTCCACGGCGGCCTCGGGATCCACCACAGCCTCGCATGGATTCCTAACCAGTCGACCTGCAAGGGCACCATAGCGGAGTGTTTCGGCGGAGATGAGTTCGAGTTCGATTCGGAAATCAGTCGCCGAATCTTGGCCACCAGCCAGTACATCAGCTACGGCGCTTTGCAGAGGAACAACGTGCCGTGCTCGAGACGCGGTGCTTCCTACTACAATTGCCAGCCCGGAGCTCAGGCCAATCCCTACAACCGTGGATGCAGCGCCATTACCAGGTGCAGGAGTTGAGTAATTTGTTTCTGTACTCTCTGTTCAATAATGATCATTTTCTCTCCATTTCAATGTTTATTTAATATTTTTCTTGTTTCTTTCTTTCTCTGTGATGCCTCTGATTGTTATACAAATTGAAACGGGGAGATTGATTATATAGTACTGTCCTCGATGTTGTGATTGTAAGCGTGTTTGCAAATTCTTGTTGTGCTTCATTGATTCAATATCTCTGCTCAATAATGTGGTGATTATCTTTTAAAGGCTTGGATTTTGGTTCCTCTTCATTGAAGGGGAAAAGTGATTCTGCGAAGAACAAAGGCTGTACTGAGTTGGAAATTTAGGGAGAATTATGGATATCTCATTATGAAATATTTGAGAATCAACTGATTTGGCTGTGCTATAATAAGTATATATTTCTATTCTTGAAAATGTCAAATTTCTGTGTTTCTGGTGTTGTGTTTTGGGTTTGGATAACTTCACAAGGTCTATTTCTCTTCAATT

mRNA sequence

ATCCACGACGGTTCCAAAAAAGAATCTAAAAGAATGGCATATTCGTAATTAAGTAGTAAAACTAAGGGCTTATTTTCTGACCACGTTCTAAATAAGTCTTCAGAGCTGGCCTCTTCACTGCTCGCTTATTCTGTGCAAAAAAAAAAAAAAAAACCAAGAACCCACCGACGAATCGCCGGAGCTTTCACCGGAGCTGAAGAAACCGTCAATTCCGAGAAGAATCGCGAGGAAAAAAGAGAGATCGAGAGCTCTATTCTGGCATGACAATGGCCGGATTCAACTCTCCGACCTTCTTCCTGATCTGCGCCGCCGTGTTCGTGGTCTTCACCTGCTCCTCCACCGCCGTCCACGGCGGCCTCGGGATCCACCACAGCCTCGCATGGATTCCTAACCAGTCGACCTGCAAGGGCACCATAGCGGAGTGTTTCGGCGGAGATGAGTTCGAGTTCGATTCGGAAATCAGTCGCCGAATCTTGGCCACCAGCCAGTACATCAGCTACGGCGCTTTGCAGAGGAACAACGTGCCGTGCTCGAGACGCGGTGCTTCCTACTACAATTGCCAGCCCGGAGCTCAGGCCAATCCCTACAACCGTGGATGCAGCGCCATTACCAGGTGCAGGAGTTGAGTAATTTGTTTCTGTACTCTCTGTTCAATAATGATCATTTTCTCTCCATTTCAATGTTTATTTAATATTTTTCTTGTTTCTTTCTTTCTCTGTGATGCCTCTGATTGTTATACAAATTGAAACGGGGAGATTGATTATATAGTACTGTCCTCGATGTTGTGATTGTAAGCGTGTTTGCAAATTCTTGTTGTGCTTCATTGATTCAATATCTCTGCTCAATAATGTGGTGATTATCTTTTAAAGGCTTGGATTTTGGTTCCTCTTCATTGAAGGGGAAAAGTGATTCTGCGAAGAACAAAGGCTGTACTGAGTTGGAAATTTAGGGAGAATTATGGATATCTCATTATGAAATATTTGAGAATCAACTGATTTGGCTGTGCTATAATAAGTATATATTTCTATTCTTGAAAATGTCAAATTTCTGTGTTTCTGGTGTTGTGTTTTGGGTTTGGATAACTTCACAAGGTCTATTTCTCTTCAATT

Coding sequence (CDS)

ATGACAATGGCCGGATTCAACTCTCCGACCTTCTTCCTGATCTGCGCCGCCGTGTTCGTGGTCTTCACCTGCTCCTCCACCGCCGTCCACGGCGGCCTCGGGATCCACCACAGCCTCGCATGGATTCCTAACCAGTCGACCTGCAAGGGCACCATAGCGGAGTGTTTCGGCGGAGATGAGTTCGAGTTCGATTCGGAAATCAGTCGCCGAATCTTGGCCACCAGCCAGTACATCAGCTACGGCGCTTTGCAGAGGAACAACGTGCCGTGCTCGAGACGCGGTGCTTCCTACTACAATTGCCAGCCCGGAGCTCAGGCCAATCCCTACAACCGTGGATGCAGCGCCATTACCAGGTGCAGGAGTTGA

Protein sequence

MTMAGFNSPTFFLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPNQSTCKGTIAECFGGDEFEFDSEISRRILATSQYISYGALQRNNVPCSRRGASYYNCQPGAQANPYNRGCSAITRCRS

Homology

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BLAST of Sed0026350 vs. NCBI nr
Match: XP_022966015.1 (protein RALF-like 33 [Cucurbita maxima] >XP_023537429.1 protein RALF-like 33 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 240.0 bits (611), Expect = 1.1e-59
Identity = 113/121 (93.39%), Postives = 117/121 (96.69%), Query Frame = 0


Query: 1   MTMAGFNSPTFFLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPNQSTCKGTIAECFGGDE 60
           M MAGFNS TFFLICAAVFVVF+CSSTAVHGGLGIHHSL WIPNQSTCKGTIAECFGG+E
Sbjct: 1   MAMAGFNSSTFFLICAAVFVVFSCSSTAVHGGLGIHHSLGWIPNQSTCKGTIAECFGGEE 60

Query: 61  FEFDSEISRRILATSQYISYGALQRNNVPCSRRGASYYNCQPGAQANPYNRGCSAITRCR 120
           FEFDSEISRRILATSQYISYGAL+RN VPCSRRGASYYNCQPGAQANPY+RGCSAITRCR
Sbjct: 61  FEFDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAITRCR 120

Query: 121 S 122
           S
Sbjct: 121 S 121

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BLAST of Sed0026350 vs. NCBI nr
Match: XP_038889183.1 (protein RALF-like 33 [Benincasa hispida])

HSP 1 Score: 239.2 bits (609), Expect = 1.9e-59
Identity = 111/121 (91.74%), Postives = 118/121 (97.52%), Query Frame = 0


Query: 1   MTMAGFNSPTFFLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPNQSTCKGTIAECFGGDE 60
           M MAGFNSPTFFLICAAVFV+F+CSSTAVH GLGIHHSLAWIPNQSTCKG+IAECFGG+E
Sbjct: 1   MAMAGFNSPTFFLICAAVFVIFSCSSTAVHAGLGIHHSLAWIPNQSTCKGSIAECFGGEE 60

Query: 61  FEFDSEISRRILATSQYISYGALQRNNVPCSRRGASYYNCQPGAQANPYNRGCSAITRCR 120
           FEFDSEI+RRILATSQYISYGAL+RN VPCSRRGASYYNCQPGAQANPY+RGCSAITRCR
Sbjct: 61  FEFDSEINRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAITRCR 120

Query: 121 S 122
           S
Sbjct: 121 S 121

[Close]

BLAST of Sed0026350 vs. NCBI nr
Match: XP_022937540.1 (protein RALF-like 33 [Cucurbita moschata])

HSP 1 Score: 236.9 bits (603), Expect = 9.2e-59
Identity = 112/121 (92.56%), Postives = 116/121 (95.87%), Query Frame = 0


Query: 1   MTMAGFNSPTFFLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPNQSTCKGTIAECFGGDE 60
           M MAGFNS TFFLICAAVFVVF+CSSTAVHGGLGI HSL WIPNQSTCKGTIAECFGG+E
Sbjct: 1   MAMAGFNSSTFFLICAAVFVVFSCSSTAVHGGLGIQHSLGWIPNQSTCKGTIAECFGGEE 60

Query: 61  FEFDSEISRRILATSQYISYGALQRNNVPCSRRGASYYNCQPGAQANPYNRGCSAITRCR 120
           FEFDSEISRRILATSQYISYGAL+RN VPCSRRGASYYNCQPGAQANPY+RGCSAITRCR
Sbjct: 61  FEFDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAITRCR 120

Query: 121 S 122
           S
Sbjct: 121 S 121

[Close]

BLAST of Sed0026350 vs. NCBI nr
Match: KAG6586247.1 (Protein RALF-like 33, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 235.3 bits (599), Expect = 2.7e-58
Identity = 111/119 (93.28%), Postives = 115/119 (96.64%), Query Frame = 0


Query: 3   MAGFNSPTFFLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPNQSTCKGTIAECFGGDEFE 62
           MAGFNS TFFLICAAVFVVF+CSSTAVHGGLGI HSL WIPNQSTCKGTIAECFGG+EFE
Sbjct: 1   MAGFNSSTFFLICAAVFVVFSCSSTAVHGGLGIQHSLGWIPNQSTCKGTIAECFGGEEFE 60

Query: 63  FDSEISRRILATSQYISYGALQRNNVPCSRRGASYYNCQPGAQANPYNRGCSAITRCRS 122
           FDSEISRRILATSQYISYGAL+RN VPCSRRGASYYNCQPGAQANPY+RGCSAITRCRS
Sbjct: 61  FDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAITRCRS 119

[Close]

BLAST of Sed0026350 vs. NCBI nr
Match: XP_022150733.1 (protein RALF-like 33 [Momordica charantia])

HSP 1 Score: 232.3 bits (591), Expect = 2.3e-57
Identity = 111/121 (91.74%), Postives = 117/121 (96.69%), Query Frame = 0


Query: 1   MTMAGFNSPTFFLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPNQSTCKGTIAECFGGDE 60
           M MAGF+SPT FLICAAVFVVFTCSSTAVHGGLGIHHSLAWIP+QS+CKG+IAECFGG+E
Sbjct: 1   MAMAGFHSPT-FLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPDQSSCKGSIAECFGGEE 60

Query: 61  FEFDSEISRRILATSQYISYGALQRNNVPCSRRGASYYNCQPGAQANPYNRGCSAITRCR 120
           FEFDSEISRRILATSQYISYGAL+RN VPCSRRGASYYNCQPGAQANPY RGCSAITRCR
Sbjct: 61  FEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNCQPGAQANPYGRGCSAITRCR 120

Query: 121 S 122
           S
Sbjct: 121 S 120

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BLAST of Sed0026350 vs. ExPASy Swiss-Prot
Match: Q945T0 (Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 2.7e-29
Identity = 66/114 (57.89%), Postives = 81/114 (71.05%), Query Frame = 0


Query: 9   PTFFLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPNQSTCKGTIAECFG-GDEFEFDSEI 68
           P+  ++C  +   F   S A  G  G +  +    +   CKG+I EC    +EFE DSE 
Sbjct: 4   PSGLILCVLIGAFFI--SMAAAGDSGAYDWVMPARSGGGCKGSIGECIAEEEEFELDSES 63

Query: 69  SRRILATSQYISYGALQRNNVPCSRRGASYYNCQPGAQANPYNRGCSAITRCRS 122
           +RRILAT +YISYGALQ+N+VPCSRRGASYYNC+PGAQANPY+RGCSAITRCRS
Sbjct: 64  NRRILATKKYISYGALQKNSVPCSRRGASYYNCKPGAQANPYSRGCSAITRCRS 115

[Close]

BLAST of Sed0026350 vs. ExPASy Swiss-Prot
Match: Q8L9P8 (Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 2.7e-29
Identity = 61/83 (73.49%), Postives = 71/83 (85.54%), Query Frame = 0


Query: 41  WIPNQSTCKGTIAEC---FGGDEFEFDSEISRRILATSQYISYGALQRNNVPCSRRGASY 100
           ++P +S C GTIAEC      +EFE DSEI+RRILAT++YISYGAL+RN VPCSRRGASY
Sbjct: 33  FVPIESKCNGTIAECSLSTAEEEFEMDSEINRRILATTKYISYGALRRNTVPCSRRGASY 92

Query: 101 YNCQPGAQANPYNRGCSAITRCR 121
           YNC+ GAQANPY+RGCSAITRCR
Sbjct: 93  YNCRRGAQANPYSRGCSAITRCR 115

[Close]

BLAST of Sed0026350 vs. ExPASy Swiss-Prot
Match: Q9SRY3 (Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 3.6e-29
Identity = 70/116 (60.34%), Postives = 81/116 (69.83%), Query Frame = 0


Query: 10  TFFLICAAVFVVFTCSSTAVHGGLGIH-HSLAWI---PNQSTCKGTIAECFGGDEFEFDS 69
           T FL    + VVF  SS  V  G       +AW     N S C G+IAEC G +E E DS
Sbjct: 6   TLFL-TLTILVVFIISSPPVQAGFANDLGGVAWATTGDNGSGCHGSIAECIGAEEEEMDS 65

Query: 70  EISRRILATSQYISYGALQRNNVPCSRRGASYYNCQPGAQANPYNRGCSAITRCRS 122
           EI+RRILAT++YISY +L+RN+VPCSRRGASYYNCQ GAQANPY+RGCS I RCRS
Sbjct: 66  EINRRILATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQANPYSRGCSKIARCRS 120

[Close]

BLAST of Sed0026350 vs. ExPASy Swiss-Prot
Match: Q9LUS7 (Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.1e-27
Identity = 61/95 (64.21%), Postives = 72/95 (75.79%), Query Frame = 0


Query: 43  PNQSTCKGTIAEC-------------FG----GDEFEFDSEISRRILATSQYISYGALQR 102
           P ++ C+GTIAEC             +G    G+EFE DSEI+RRILAT +YISYGAL+R
Sbjct: 42  PFETECRGTIAECSVSAALGDGGDLFYGGGEMGEEFEMDSEINRRILATRRYISYGALRR 101

Query: 103 NNVPCSRRGASYYNCQPGAQANPYNRGCSAITRCR 121
           N +PCSRRGASYYNC+ GAQANPY+RGCSAITRCR
Sbjct: 102 NTIPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 136

[Close]

BLAST of Sed0026350 vs. ExPASy Swiss-Prot
Match: Q9MA62 (Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 7.4e-27
Identity = 57/76 (75.00%), Postives = 65/76 (85.53%), Query Frame = 0


Query: 46  STCKGTIAECFG-GDEFEFDSEISRRILATSQYISYGALQRNNVPCSRRGASYYNCQPGA 105
           S C G+IAEC    +E EFDS+ISRRILA  +YISYGA++RN+VPCSRRGASYYNCQ GA
Sbjct: 43  SGCTGSIAECIAEEEEMEFDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGA 102

Query: 106 QANPYNRGCSAITRCR 121
           QANPY+RGCS ITRCR
Sbjct: 103 QANPYSRGCSTITRCR 118

[Close]

BLAST of Sed0026350 vs. ExPASy TrEMBL
Match: A0A6J1HQE4 (protein RALF-like 33 OS=Cucurbita maxima OX=3661 GN=LOC111465728 PE=3 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 5.3e-60
Identity = 113/121 (93.39%), Postives = 117/121 (96.69%), Query Frame = 0


Query: 1   MTMAGFNSPTFFLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPNQSTCKGTIAECFGGDE 60
           M MAGFNS TFFLICAAVFVVF+CSSTAVHGGLGIHHSL WIPNQSTCKGTIAECFGG+E
Sbjct: 1   MAMAGFNSSTFFLICAAVFVVFSCSSTAVHGGLGIHHSLGWIPNQSTCKGTIAECFGGEE 60

Query: 61  FEFDSEISRRILATSQYISYGALQRNNVPCSRRGASYYNCQPGAQANPYNRGCSAITRCR 120
           FEFDSEISRRILATSQYISYGAL+RN VPCSRRGASYYNCQPGAQANPY+RGCSAITRCR
Sbjct: 61  FEFDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAITRCR 120

Query: 121 S 122
           S
Sbjct: 121 S 121

[Close]

BLAST of Sed0026350 vs. ExPASy TrEMBL
Match: A0A6J1FH12 (protein RALF-like 33 OS=Cucurbita moschata OX=3662 GN=LOC111443916 PE=3 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 4.5e-59
Identity = 112/121 (92.56%), Postives = 116/121 (95.87%), Query Frame = 0


Query: 1   MTMAGFNSPTFFLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPNQSTCKGTIAECFGGDE 60
           M MAGFNS TFFLICAAVFVVF+CSSTAVHGGLGI HSL WIPNQSTCKGTIAECFGG+E
Sbjct: 1   MAMAGFNSSTFFLICAAVFVVFSCSSTAVHGGLGIQHSLGWIPNQSTCKGTIAECFGGEE 60

Query: 61  FEFDSEISRRILATSQYISYGALQRNNVPCSRRGASYYNCQPGAQANPYNRGCSAITRCR 120
           FEFDSEISRRILATSQYISYGAL+RN VPCSRRGASYYNCQPGAQANPY+RGCSAITRCR
Sbjct: 61  FEFDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAITRCR 120

Query: 121 S 122
           S
Sbjct: 121 S 121

[Close]

BLAST of Sed0026350 vs. ExPASy TrEMBL
Match: A0A0A0LFW9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G031140 PE=3 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 2.2e-58
Identity = 108/121 (89.26%), Postives = 117/121 (96.69%), Query Frame = 0


Query: 1   MTMAGFNSPTFFLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPNQSTCKGTIAECFGGDE 60
           M MAGFNSPTFFLICAAVF++F+CSST VH GLGI HSLAWIPNQSTCKG+IAECFGG+E
Sbjct: 1   MAMAGFNSPTFFLICAAVFLIFSCSSTTVHAGLGIQHSLAWIPNQSTCKGSIAECFGGEE 60

Query: 61  FEFDSEISRRILATSQYISYGALQRNNVPCSRRGASYYNCQPGAQANPYNRGCSAITRCR 120
           FEFDSEI+RRILATSQYISYGAL+RNNVPCSRRGASYYNCQPGAQANPY+RGC+AITRCR
Sbjct: 61  FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCR 120

Query: 121 S 122
           S
Sbjct: 121 S 121

[Close]

BLAST of Sed0026350 vs. ExPASy TrEMBL
Match: A0A6J1DA82 (protein RALF-like 33 OS=Momordica charantia OX=3673 GN=LOC111018792 PE=3 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.1e-57
Identity = 111/121 (91.74%), Postives = 117/121 (96.69%), Query Frame = 0


Query: 1   MTMAGFNSPTFFLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPNQSTCKGTIAECFGGDE 60
           M MAGF+SPT FLICAAVFVVFTCSSTAVHGGLGIHHSLAWIP+QS+CKG+IAECFGG+E
Sbjct: 1   MAMAGFHSPT-FLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPDQSSCKGSIAECFGGEE 60

Query: 61  FEFDSEISRRILATSQYISYGALQRNNVPCSRRGASYYNCQPGAQANPYNRGCSAITRCR 120
           FEFDSEISRRILATSQYISYGAL+RN VPCSRRGASYYNCQPGAQANPY RGCSAITRCR
Sbjct: 61  FEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNCQPGAQANPYGRGCSAITRCR 120

Query: 121 S 122
           S
Sbjct: 121 S 120

[Close]

BLAST of Sed0026350 vs. ExPASy TrEMBL
Match: A0A5A7TYI2 (Rapid ALkalinization Factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00530 PE=3 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.2e-56
Identity = 106/121 (87.60%), Postives = 117/121 (96.69%), Query Frame = 0


Query: 1   MTMAGFNSPTFFLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPNQSTCKGTIAECFGGDE 60
           M MAGFNSPTFFLI AAVF++F+CSSTAVH G+GI +SLAWIPNQSTCKG+IAECFGG+E
Sbjct: 1   MAMAGFNSPTFFLISAAVFLIFSCSSTAVHAGIGIQNSLAWIPNQSTCKGSIAECFGGEE 60

Query: 61  FEFDSEISRRILATSQYISYGALQRNNVPCSRRGASYYNCQPGAQANPYNRGCSAITRCR 120
           FEFDSEI+RRILATSQYISYGAL+RNNVPCSRRGASYYNCQPGAQANPY+RGC+AITRCR
Sbjct: 61  FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCR 120

Query: 121 S 122
           S
Sbjct: 121 S 121

[Close]

BLAST of Sed0026350 vs. TAIR 10
Match: AT4G15800.1 (ralf-like 33 )

HSP 1 Score: 129.4 bits (324), Expect = 1.9e-30
Identity = 61/83 (73.49%), Postives = 71/83 (85.54%), Query Frame = 0


Query: 41  WIPNQSTCKGTIAEC---FGGDEFEFDSEISRRILATSQYISYGALQRNNVPCSRRGASY 100
           ++P +S C GTIAEC      +EFE DSEI+RRILAT++YISYGAL+RN VPCSRRGASY
Sbjct: 33  FVPIESKCNGTIAECSLSTAEEEFEMDSEINRRILATTKYISYGALRRNTVPCSRRGASY 92

Query: 101 YNCQPGAQANPYNRGCSAITRCR 121
           YNC+ GAQANPY+RGCSAITRCR
Sbjct: 93  YNCRRGAQANPYSRGCSAITRCR 115

[Close]

BLAST of Sed0026350 vs. TAIR 10
Match: AT1G02900.1 (rapid alkalinization factor 1 )

HSP 1 Score: 129.0 bits (323), Expect = 2.5e-30
Identity = 70/116 (60.34%), Postives = 81/116 (69.83%), Query Frame = 0


Query: 10  TFFLICAAVFVVFTCSSTAVHGGLGIH-HSLAWI---PNQSTCKGTIAECFGGDEFEFDS 69
           T FL    + VVF  SS  V  G       +AW     N S C G+IAEC G +E E DS
Sbjct: 6   TLFL-TLTILVVFIISSPPVQAGFANDLGGVAWATTGDNGSGCHGSIAECIGAEEEEMDS 65

Query: 70  EISRRILATSQYISYGALQRNNVPCSRRGASYYNCQPGAQANPYNRGCSAITRCRS 122
           EI+RRILAT++YISY +L+RN+VPCSRRGASYYNCQ GAQANPY+RGCS I RCRS
Sbjct: 66  EINRRILATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQANPYSRGCSKIARCRS 120

[Close]

BLAST of Sed0026350 vs. TAIR 10
Match: AT3G16570.1 (rapid alkalinization factor 23 )

HSP 1 Score: 124.0 bits (310), Expect = 8.1e-29
Identity = 61/95 (64.21%), Postives = 72/95 (75.79%), Query Frame = 0


Query: 43  PNQSTCKGTIAEC-------------FG----GDEFEFDSEISRRILATSQYISYGALQR 102
           P ++ C+GTIAEC             +G    G+EFE DSEI+RRILAT +YISYGAL+R
Sbjct: 42  PFETECRGTIAECSVSAALGDGGDLFYGGGEMGEEFEMDSEINRRILATRRYISYGALRR 101

Query: 103 NNVPCSRRGASYYNCQPGAQANPYNRGCSAITRCR 121
           N +PCSRRGASYYNC+ GAQANPY+RGCSAITRCR
Sbjct: 102 NTIPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 136

[Close]

BLAST of Sed0026350 vs. TAIR 10
Match: AT3G05490.1 (ralf-like 22 )

HSP 1 Score: 121.3 bits (303), Expect = 5.3e-28
Identity = 57/76 (75.00%), Postives = 65/76 (85.53%), Query Frame = 0


Query: 46  STCKGTIAECFG-GDEFEFDSEISRRILATSQYISYGALQRNNVPCSRRGASYYNCQPGA 105
           S C G+IAEC    +E EFDS+ISRRILA  +YISYGA++RN+VPCSRRGASYYNCQ GA
Sbjct: 43  SGCTGSIAECIAEEEEMEFDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGA 102

Query: 106 QANPYNRGCSAITRCR 121
           QANPY+RGCS ITRCR
Sbjct: 103 QANPYSRGCSTITRCR 118

[Close]

BLAST of Sed0026350 vs. TAIR 10
Match: AT2G33775.1 (ralf-like 19 )

HSP 1 Score: 83.6 bits (205), Expect = 1.2e-16
Identity = 41/69 (59.42%), Postives = 50/69 (72.46%), Query Frame = 0


Query: 55  CFGGD---EFEFDSEISRRILATSQ-YISYGALQRNNVPCSRRGASYYNCQPGAQANPYN 114
           C G D   ++  DSE +RR LA  + YISYGAL++NNVPCSRRG SYY+C+   +ANPY 
Sbjct: 37  CIGEDGELDYLMDSETNRRQLAARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYR 96

Query: 115 RGCSAITRC 120
           RGCS IT C
Sbjct: 97  RGCSVITHC 105

The following BLAST results are available for this feature:

BLAST of Sed0026350 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022966015.1	1.1e-59	93.39	protein RALF-like 33 [Cucurbita maxima] >XP_023537429.1 protein RALF-like 33 [Cu...	[more]
XP_038889183.1	1.9e-59	91.74	protein RALF-like 33 [Benincasa hispida]	[more]
XP_022937540.1	9.2e-59	92.56	protein RALF-like 33 [Cucurbita moschata]	[more]
KAG6586247.1	2.7e-58	93.28	Protein RALF-like 33, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022150733.1	2.3e-57	91.74	protein RALF-like 33 [Momordica charantia]	[more]

BLAST of Sed0026350 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q945T0	2.7e-29	57.89	Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1	[more]
Q8L9P8	2.7e-29	73.49	Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1	[more]
Q9SRY3	3.6e-29	60.34	Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1	[more]
Q9LUS7	1.1e-27	64.21	Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV...	[more]
Q9MA62	7.4e-27	75.00	Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1	[more]

BLAST of Sed0026350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HQE4	5.3e-60	93.39	protein RALF-like 33 OS=Cucurbita maxima OX=3661 GN=LOC111465728 PE=3 SV=1	[more]
A0A6J1FH12	4.5e-59	92.56	protein RALF-like 33 OS=Cucurbita moschata OX=3662 GN=LOC111443916 PE=3 SV=1	[more]
A0A0A0LFW9	2.2e-58	89.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G031140 PE=3 SV=1	[more]
A0A6J1DA82	1.1e-57	91.74	protein RALF-like 33 OS=Momordica charantia OX=3673 GN=LOC111018792 PE=3 SV=1	[more]
A0A5A7TYI2	1.2e-56	87.60	Rapid ALkalinization Factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]

BLAST of Sed0026350 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15800.1	1.9e-30	73.49	ralf-like 33	[more]
AT1G02900.1	2.5e-30	60.34	rapid alkalinization factor 1	[more]
AT3G16570.1	8.1e-29	64.21	rapid alkalinization factor 23	[more]
AT3G05490.1	5.3e-28	75.00	ralf-like 22	[more]
AT2G33775.1	1.2e-16	59.42	ralf-like 19	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 60..120 e-value: 8.4E-31 score: 106.7
None	No IPR available	PANTHER	PTHR33136	RAPID ALKALINIZATION FACTOR-LIKE	coord: 6..121
None	No IPR available	PANTHER	PTHR33136:SF50	PROTEIN RALF-LIKE 33	coord: 6..121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0026350.1	Sed0026350.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019722	calcium-mediated signaling
cellular_component	GO:0005576	extracellular region