Sed0026338 (gene) Chayote v1

Overview


Name	Sed0026338
Type	gene
Organism	Sechium edule (Chayote v1)
Description	binding partner of ACD11 1
Location	LG03: 1218658 .. 1222079 (-)
RNA-Seq Expression	Sed0026338
Synteny	Sed0026338

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATAAGTTCAAGTTCAACCAAAACTGATACAGAAAACAAAAACAAAAAAAATGTCGGCTAAGTTTTCAGGTTTCAGCTCAGCCCCCTCTCCTCCTCTTCACTCTGAGCTTCAATCAGGTAATCGCCTTTACAAAATCTTCAATCTTCAAAAAAATACTGATTTCCACTTGTTTGGTTTCAATTTCATCTTTTTTGTCGTTCTTTGATTGTTTTGGCTATTGGGTTTGTTTTAGGTTTCCATTTCCAGATCTGGGTTGTGGATTTATCCTGGCAAGTTCTTAAAATTTTCATCCTTTTTGTTCATTTGAGTTGCTTTTGTTTGTAATTTGCTCTTTTTCAGACACCCTTTTGCCCAAAGATTCTGGGAATCTCTAATTGTATGAGTATATACAGTTATGAGACTTGAGTTAACTTAAAATGTCAAAAGAGACTTAGTTTTACAATGGATTATAAGAATGCAATCATGAATTTAACTTAAGCTAGAAGCAATACTTTTTCAAAGGTTTTCATGCTTTTGGGATGAGCCTGCTAGTGATACATTATGGCTTTGGACCATTGAACTGTTATGATGAATGTCAGAGTCATCATATTCCTAGTTGATAATGCTTATCATCTATATGCTTTGGACCATTCTTTTGGTGAGTGGAAGATGCTGATAAGAAAAGGAATGAAGGCTGATTTTTATGAATATGAAGTATTGAGCTAATTGGCATTTCAGTCTTCTTTGAATAAGGTTGTTTAAGGTAGGTTTTTTTTTGTATCAATGTTCCCAGGTATTAGTCTTCAATTCAAGATTTTAGCATATAGAGCTGTGTGGAACAATGTATTCTGGGGGTTATACTGCTGAAGTTACAAGCTTGTCACCTAAGGCTACAGAGAATGATGTTTATGATTTTTTTAATCATTGTGGCGCAGTCGAGCACGTAGAAATCCTCAGGTGAATAGAACATTAATACTCTGGGTTTGATAATTTGTTATATTTGAAACTATATGTGAAGCTATTACCATAACTTATGCTCATTGAGGATGAATAATATTTAAACACCACTTGGCATTTGCAAATCAAAAGCTTTGAAACATTTTGTATCAGTATGCTATTATGTGCTCTTTCCCTCCTTTTATTCTTTCCAGTTAGTTTCAGTTATAGTTTCGCCAACACCGACAAGAAGAGGCCCTGTCTGTCTCATCATAGTTTTATCCAGCCAGTTGATAGGATAAAGATCATTAATTTTTATTCCTCTGTATTTTCACTGAATAACTTGCAAGATGGGAGTTTTATATTTCTGTTGAGATTAAGTAGTAAAAAGAAGTGTGGGTTTTTTCAGAAATGCTAAAGATAGTAAACTCAAACTGGACTTGTGATGAGTCTGTCTCTGAAGTCTAGATTAATTTTTCGGTATGATGCAATTTTCAGTTTGCAGTGCACCAAGCTCATTGAAAACATTTTCTCTATTGCGATAACAGATCGGGGGATTATGCATGTACTGCTTATGTGACTTTTCGAGATGCTTTTGCTCTGGAAACTGCTATATTGCTTAGTGTAAGTTCTTGAGGATTTTTTACTTTTACCTGACTTGAGATTCTTGTGTTCAATTTCATTTTTCAATGACCTGCCTTTACTTATTTTTAGTTTATCAATCATAGCTTTGTTTACAGTACTTCCTACCGATTCTGCTCGCTTGCATTTGTTTCAGTGATGTATGTATAAGTATACATACAAGATACAAATACACACTTTAGGAGTAGCCATTTGTATATGACCTTAAGATTTCATTCTAGATTCTATCATTCTTGCTTTCTAAGTAAGTTTTCCCTAGATGCCTCTTTTTATTTCTGTTTAAACACATTTAGTTTTCTCTAGCACTAGTTGAGAGTTGAATTACTCAATGTGCAATTACTTTCATTTGCAACAATTTGAAGGATGATCATTTGTAATTTGTCATTTCAAGCACTCCCATGAGCAGGACCAATGAATATTTGTTCTTGTATTCATATGAACTGTTGACTTCATGCACCCAACAGCTTTTCACACAAGGGTTCCTGAGTTTCCGGCTTAATTGAATGGCGTAAAGCAGTGAACATCTTTTATGGTTTGTGGGAAGTCGAAAAGAGTGTTATGATTCAGTTCATTTCTTAATGATTTCAAAGAAGTCTTTCTAAGTTTGATATTCACCCTTGGTTTGAAGTTTGGACTCTTAATGATCATGTTCATAACTTTTGATAACAATTGAAATTTCTGTTTCTCTCAAATCAAACCCCTACATATAGCCATCCTAAGATTATCTTCAAGCATCACTTCTGAGCTTTCATATGGCAGTTCATTTGCTGATTTTGATGTTCCAGGGGGCTGAAATCCTAGATCAATGTGTGTTCATATCACGGTGGGGAAACTACAGTGATGAATCCGACACCTGGGACAGAACCGATGACAATACAAGCTTAACGGTAAGCAAATTCGATAGTTTTTCGATCTTCAAAGGCATCGACATAAACTAAAAAAATCTTACTGGATACACATTCGAAGCACTTTTTCCGTTTTTCTCTCATACATCTCGGCTGTATCGTGACAGCCTCGTCTGCTGTTACTAGTTTGTCCACTATTTTTGAATTGATATCCTTAAATTTCTTTATGAAAAAACAGGTGACAGAAATAATGCATTCTGTTTACACACCAGGGGAGGCTGTAACTGTGGCTCAACAAGTTGTCACAACAATGCTATCAAAAGGATATGTGTTAACCAAAGATGCACTTGTAAAGGCTAAAGCTTTTGATGACTCTTGCCAAGTCTCAGCCACTGCAGCAGCCAAAGTTTCTGAGCTTAGCAACAGAATTGGACTCACTGATGCAATTCATGCTGGCATGGAAACCGTCAAATATATCGATGAGAAGTATCACGTTTCAGATATCACCAAGTCCGCTGCAGTCGTTACTGGAACTGCGGCCGTGGTGGCGGTGGGGGTGACGGGGAAAGCGGCAATGGCAGCCGGTAATGCTGTAGTGAACAGCAGGTACTTTTCGAAGGGTGCGCTTTGGGTTTCGGATATGTTGAGCCGTGCTTCTAAGGCTGCTGCTGAAGTTGGTATGAAAAACAGTAATGGAATAACAAAACTTTGAATCAAAACCAACAAAAATTTCATTCCTTGGCTTCATCATGGAAATATATATAATATATATACTTGAGCTTTTCTTGATTTTTGTGGAACATGTGAACAATTTGGTATACTTTAGTATCATGTTAATTGCAAATAAGATCAATGATGTGAATCAAAATTTTAACTTGTGATCTCTTAATCATAAGTATATACATTATGAAAGTTTTTTTTTTTTTGAAACAGCATACATTATGCAAGTTGAGTAACGTTCTTGGTGTTAATTTGAATTCTATACCATATAATATGTTGGATTTTTATTTATTTATTTA

mRNA sequence

AATAAGTTCAAGTTCAACCAAAACTGATACAGAAAACAAAAACAAAAAAAATGTCGGCTAAGTTTTCAGGTTTCAGCTCAGCCCCCTCTCCTCCTCTTCACTCTGAGCTTCAATCAGGTTTCCATTTCCAGATCTGGGTTGTGGATTTATCCTGGTATTAGTCTTCAATTCAAGATTTTAGCATATAGAGCTGTGTGGAACAATGTATTCTGGGGGTTATACTGCTGAAGTTACAAGCTTGTCACCTAAGGCTACAGAGAATGATGTTTATGATTTTTTTAATCATTGTGGCGCAGTCGAGCACGTAGAAATCCTCAGATCGGGGGATTATGCATGTACTGCTTATGTGACTTTTCGAGATGCTTTTGCTCTGGAAACTGCTATATTGCTTAGTGGGGCTGAAATCCTAGATCAATGTGTGTTCATATCACGGTGGGGAAACTACAGTGATGAATCCGACACCTGGGACAGAACCGATGACAATACAAGCTTAACGGTGACAGAAATAATGCATTCTGTTTACACACCAGGGGAGGCTGTAACTGTGGCTCAACAAGTTGTCACAACAATGCTATCAAAAGGATATGTGTTAACCAAAGATGCACTTGTAAAGGCTAAAGCTTTTGATGACTCTTGCCAAGTCTCAGCCACTGCAGCAGCCAAAGTTTCTGAGCTTAGCAACAGAATTGGACTCACTGATGCAATTCATGCTGGCATGGAAACCGTCAAATATATCGATGAGAAGTATCACGTTTCAGATATCACCAAGTCCGCTGCAGTCGTTACTGGAACTGCGGCCGTGGTGGCGGTGGGGGTGACGGGGAAAGCGGCAATGGCAGCCGGTAATGCTGTAGTGAACAGCAGGTACTTTTCGAAGGGTGCGCTTTGGGTTTCGGATATGTTGAGCCGTGCTTCTAAGGCTGCTGCTGAAGTTGGTATGAAAAACAGTAATGGAATAACAAAACTTTGAATCAAAACCAACAAAAATTTCATTCCTTGGCTTCATCATGGAAATATATATAATATATATACTTGAGCTTTTCTTGATTTTTGTGGAACATGTGAACAATTTGGTATACTTTAGTATCATGTTAATTGCAAATAAGATCAATGATGTGAATCAAAATTTTAACTTGTGATCTCTTAATCATAAGTATATACATTATGAAAGTTTTTTTTTTTTTGAAACAGCATACATTATGCAAGTTGAGTAACGTTCTTGGTGTTAATTTGAATTCTATACCATATAATATGTTGGATTTTTATTTATTTATTTA

Coding sequence (CDS)

ATGTATTCTGGGGGTTATACTGCTGAAGTTACAAGCTTGTCACCTAAGGCTACAGAGAATGATGTTTATGATTTTTTTAATCATTGTGGCGCAGTCGAGCACGTAGAAATCCTCAGATCGGGGGATTATGCATGTACTGCTTATGTGACTTTTCGAGATGCTTTTGCTCTGGAAACTGCTATATTGCTTAGTGGGGCTGAAATCCTAGATCAATGTGTGTTCATATCACGGTGGGGAAACTACAGTGATGAATCCGACACCTGGGACAGAACCGATGACAATACAAGCTTAACGGTGACAGAAATAATGCATTCTGTTTACACACCAGGGGAGGCTGTAACTGTGGCTCAACAAGTTGTCACAACAATGCTATCAAAAGGATATGTGTTAACCAAAGATGCACTTGTAAAGGCTAAAGCTTTTGATGACTCTTGCCAAGTCTCAGCCACTGCAGCAGCCAAAGTTTCTGAGCTTAGCAACAGAATTGGACTCACTGATGCAATTCATGCTGGCATGGAAACCGTCAAATATATCGATGAGAAGTATCACGTTTCAGATATCACCAAGTCCGCTGCAGTCGTTACTGGAACTGCGGCCGTGGTGGCGGTGGGGGTGACGGGGAAAGCGGCAATGGCAGCCGGTAATGCTGTAGTGAACAGCAGGTACTTTTCGAAGGGTGCGCTTTGGGTTTCGGATATGTTGAGCCGTGCTTCTAAGGCTGCTGCTGAAGTTGGTATGAAAAACAGTAATGGAATAACAAAACTTTGA

Protein sequence

MYSGGYTAEVTSLSPKATENDVYDFFNHCGAVEHVEILRSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGNYSDESDTWDRTDDNTSLTVTEIMHSVYTPGEAVTVAQQVVTTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTDAIHAGMETVKYIDEKYHVSDITKSAAVVTGTAAVVAVGVTGKAAMAAGNAVVNSRYFSKGALWVSDMLSRASKAAAEVGMKNSNGITKL

Homology

[Close]

BLAST of Sed0026338 vs. NCBI nr
Match: XP_023513532.1 (binding partner of ACD11 1-like [Cucurbita pepo subsp. pepo] >XP_023513538.1 binding partner of ACD11 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 434.5 bits (1116), Expect = 6.4e-118
Identity = 229/259 (88.42%), Postives = 238/259 (91.89%), Query Frame = 0


Query: 1   MYSGGYTAEVTSLSPKATENDVYDFFNHCGAVEHVEILRSGDYACTAYVTFRDAFALETA 60
           MYSGGYTAEVTSLSPKATENDVYDFF+HCGAV+HVEILRSGDYACTAYVTFRDAFALETA
Sbjct: 1   MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETA 60

Query: 61  ILLSGAEILDQCVFISRWGNYSDESDTWDR----TDDNTSLTVTEIMHSVYTPGEAVTVA 120
           ILLSGAEILDQCVFI RWG Y+DES  W+     TDDNTS  V EIMHS YTPGEAVTVA
Sbjct: 61  ILLSGAEILDQCVFIGRWGTYTDESYNWNNPSQMTDDNTSPMVAEIMHSAYTPGEAVTVA 120

Query: 121 QQVVTTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTDAIHAGMETVK 180
           QQVV TMLSKGYVLTKDALVKAKAFDDSCQVSA+AAAKVSELSNRIGLTDAIH GMETVK
Sbjct: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGMETVK 180

Query: 181 YIDEKYHVSDITKSAAVVTGTAAVVAVGVTGKAAMAAGNAVVNSRYFSKGALWVSDMLSR 240
           YIDEKYHVSDIT+S A+VTGTAAVVA+GV GKAAMAAG AVVNS YFSKGALWVSDMLSR
Sbjct: 181 YIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVSDMLSR 240

Query: 241 ASKAAAEVGMKNSNGITKL 256
           ASKAAAEVG +NS GITKL
Sbjct: 241 ASKAAAEVGTRNSKGITKL 259

[Close]

BLAST of Sed0026338 vs. NCBI nr
Match: XP_022952460.1 (binding partner of ACD11 1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 432.6 bits (1111), Expect = 2.4e-117
Identity = 228/259 (88.03%), Postives = 238/259 (91.89%), Query Frame = 0


Query: 1   MYSGGYTAEVTSLSPKATENDVYDFFNHCGAVEHVEILRSGDYACTAYVTFRDAFALETA 60
           MYSGGYTAEVTSLSPKATENDVYDFF+HCGAV+HVEILRSGDYACTAYVTFRDAFALETA
Sbjct: 40  MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETA 99

Query: 61  ILLSGAEILDQCVFISRWGNYSDESDTWDR----TDDNTSLTVTEIMHSVYTPGEAVTVA 120
           ILLSGAEILDQCVFI RWG Y+DES  W+     TD+NTS  V EIMHS YTPGEAVTVA
Sbjct: 100 ILLSGAEILDQCVFIGRWGTYTDESYNWNNPSQMTDNNTSPMVAEIMHSAYTPGEAVTVA 159

Query: 121 QQVVTTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTDAIHAGMETVK 180
           QQVV TMLSKGYVLTKDALVKAKAFDDSCQVSA+AAAKVSELSNRIGLTDAIH GMETVK
Sbjct: 160 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGMETVK 219

Query: 181 YIDEKYHVSDITKSAAVVTGTAAVVAVGVTGKAAMAAGNAVVNSRYFSKGALWVSDMLSR 240
           YIDEKYHVSDIT+S A+VTGTAAVVA+GV GKAAMAAG AVVNS YFSKGALWVSDMLSR
Sbjct: 220 YIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVSDMLSR 279

Query: 241 ASKAAAEVGMKNSNGITKL 256
           ASKAAAEVG +NS GITKL
Sbjct: 280 ASKAAAEVGTRNSKGITKL 298

[Close]

BLAST of Sed0026338 vs. NCBI nr
Match: XP_022952469.1 (binding partner of ACD11 1-like isoform X2 [Cucurbita moschata] >KAG6602486.1 Binding partner of ACD11 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 432.6 bits (1111), Expect = 2.4e-117
Identity = 228/259 (88.03%), Postives = 238/259 (91.89%), Query Frame = 0


Query: 1   MYSGGYTAEVTSLSPKATENDVYDFFNHCGAVEHVEILRSGDYACTAYVTFRDAFALETA 60
           MYSGGYTAEVTSLSPKATENDVYDFF+HCGAV+HVEILRSGDYACTAYVTFRDAFALETA
Sbjct: 43  MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETA 102

Query: 61  ILLSGAEILDQCVFISRWGNYSDESDTWDR----TDDNTSLTVTEIMHSVYTPGEAVTVA 120
           ILLSGAEILDQCVFI RWG Y+DES  W+     TD+NTS  V EIMHS YTPGEAVTVA
Sbjct: 103 ILLSGAEILDQCVFIGRWGTYTDESYNWNNPSQMTDNNTSPMVAEIMHSAYTPGEAVTVA 162

Query: 121 QQVVTTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTDAIHAGMETVK 180
           QQVV TMLSKGYVLTKDALVKAKAFDDSCQVSA+AAAKVSELSNRIGLTDAIH GMETVK
Sbjct: 163 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGMETVK 222

Query: 181 YIDEKYHVSDITKSAAVVTGTAAVVAVGVTGKAAMAAGNAVVNSRYFSKGALWVSDMLSR 240
           YIDEKYHVSDIT+S A+VTGTAAVVA+GV GKAAMAAG AVVNS YFSKGALWVSDMLSR
Sbjct: 223 YIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVSDMLSR 282

Query: 241 ASKAAAEVGMKNSNGITKL 256
           ASKAAAEVG +NS GITKL
Sbjct: 283 ASKAAAEVGTRNSKGITKL 301

[Close]

BLAST of Sed0026338 vs. NCBI nr
Match: XP_022952477.1 (binding partner of ACD11 1-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 432.6 bits (1111), Expect = 2.4e-117
Identity = 228/259 (88.03%), Postives = 238/259 (91.89%), Query Frame = 0


Query: 1   MYSGGYTAEVTSLSPKATENDVYDFFNHCGAVEHVEILRSGDYACTAYVTFRDAFALETA 60
           MYSGGYTAEVTSLSPKATENDVYDFF+HCGAV+HVEILRSGDYACTAYVTFRDAFALETA
Sbjct: 1   MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETA 60

Query: 61  ILLSGAEILDQCVFISRWGNYSDESDTWDR----TDDNTSLTVTEIMHSVYTPGEAVTVA 120
           ILLSGAEILDQCVFI RWG Y+DES  W+     TD+NTS  V EIMHS YTPGEAVTVA
Sbjct: 61  ILLSGAEILDQCVFIGRWGTYTDESYNWNNPSQMTDNNTSPMVAEIMHSAYTPGEAVTVA 120

Query: 121 QQVVTTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTDAIHAGMETVK 180
           QQVV TMLSKGYVLTKDALVKAKAFDDSCQVSA+AAAKVSELSNRIGLTDAIH GMETVK
Sbjct: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGMETVK 180

Query: 181 YIDEKYHVSDITKSAAVVTGTAAVVAVGVTGKAAMAAGNAVVNSRYFSKGALWVSDMLSR 240
           YIDEKYHVSDIT+S A+VTGTAAVVA+GV GKAAMAAG AVVNS YFSKGALWVSDMLSR
Sbjct: 181 YIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVSDMLSR 240

Query: 241 ASKAAAEVGMKNSNGITKL 256
           ASKAAAEVG +NS GITKL
Sbjct: 241 ASKAAAEVGTRNSKGITKL 259

[Close]

BLAST of Sed0026338 vs. NCBI nr
Match: XP_022991190.1 (binding partner of ACD11 1-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 428.3 bits (1100), Expect = 4.6e-116
Identity = 226/259 (87.26%), Postives = 237/259 (91.51%), Query Frame = 0


Query: 1   MYSGGYTAEVTSLSPKATENDVYDFFNHCGAVEHVEILRSGDYACTAYVTFRDAFALETA 60
           MYSGGY AEVTSLSPKATENDVYDFF+HCGAV+HVEILRSGDYACTAYVTFRDAFALETA
Sbjct: 1   MYSGGYAAEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETA 60

Query: 61  ILLSGAEILDQCVFISRWGNYSDESDTWD----RTDDNTSLTVTEIMHSVYTPGEAVTVA 120
           ILLSGAEILDQCVFI RWG Y+DES  W+     T+DNTS  V EIMHS YTPGEAVTVA
Sbjct: 61  ILLSGAEILDQCVFIGRWGTYTDESYNWNSPSQMTNDNTSPMVAEIMHSAYTPGEAVTVA 120

Query: 121 QQVVTTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTDAIHAGMETVK 180
           QQVV TMLSKGYVLTKDALVKAKAFDDSCQVSA+AAAKVSELSNRIGLTDAIH GMETVK
Sbjct: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGMETVK 180

Query: 181 YIDEKYHVSDITKSAAVVTGTAAVVAVGVTGKAAMAAGNAVVNSRYFSKGALWVSDMLSR 240
           YIDEKYHVSDIT+S A+VTGTAAVVA+GV GKAAMAAG AVVNS YFSKGALWVS+MLSR
Sbjct: 181 YIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVSNMLSR 240

Query: 241 ASKAAAEVGMKNSNGITKL 256
           ASKAAAEVG +NS GITKL
Sbjct: 241 ASKAAAEVGTRNSKGITKL 259

[Close]

BLAST of Sed0026338 vs. ExPASy Swiss-Prot
Match: Q9LFD5 (Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 8.3e-28
Identity = 87/250 (34.80%), Postives = 137/250 (54.80%), Query Frame = 0


Query: 7   TAEVTSLSPKATENDVYDFFNHCGAVEHVEILRSGDYACTAYVTFRDAFALETAILLSGA 66
           + +V +LS  ATE+D+ +FF+  G VE ++I +S ++  +AYVTF++    ETA+LLSGA
Sbjct: 7   SVKVGNLSSGATEHDIKEFFSFSGEVESIDI-QSNEH--SAYVTFKETQGAETAVLLSGA 66

Query: 67  EILDQCVFISRWGNYSDESDTWDRTDDNTSLTVTEIMHSVYTPGEAVTVAQQVVTTMLSK 126
            I DQ V I    NYS  +     T  + + +V             V  A+ VV++ML+K
Sbjct: 67  SIADQSVIIELAPNYSPPAAPHAETQSSGAESV-------------VQKAEDVVSSMLAK 126

Query: 127 GYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTDAIHAGM----ETVKYIDEKY 186
           G++L KDA+ KAKAFD+    ++TA A V+ L  +IGL+  + AG     E +K +D+ +
Sbjct: 127 GFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKAVDQNF 186

Query: 187 HVSDITKSAAVVTGTAAVVAVGVTGKAAMAAGNAVVNSRYFSKGALWVSDMLSRASKAAA 246
            V++ TKS                 +   +AG+AV+ +RY   G  W +   +R ++AA 
Sbjct: 187 QVTERTKS-----------VYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAAG 229

Query: 247 EVGMKNSNGI 253
           EVG K    +
Sbjct: 247 EVGQKTKEKV 229

[Close]

BLAST of Sed0026338 vs. ExPASy TrEMBL
Match: A0A6J1GKI7 (binding partner of ACD11 1-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111455139 PE=4 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 1.2e-117
Identity = 228/259 (88.03%), Postives = 238/259 (91.89%), Query Frame = 0


Query: 1   MYSGGYTAEVTSLSPKATENDVYDFFNHCGAVEHVEILRSGDYACTAYVTFRDAFALETA 60
           MYSGGYTAEVTSLSPKATENDVYDFF+HCGAV+HVEILRSGDYACTAYVTFRDAFALETA
Sbjct: 1   MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETA 60

Query: 61  ILLSGAEILDQCVFISRWGNYSDESDTWDR----TDDNTSLTVTEIMHSVYTPGEAVTVA 120
           ILLSGAEILDQCVFI RWG Y+DES  W+     TD+NTS  V EIMHS YTPGEAVTVA
Sbjct: 61  ILLSGAEILDQCVFIGRWGTYTDESYNWNNPSQMTDNNTSPMVAEIMHSAYTPGEAVTVA 120

Query: 121 QQVVTTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTDAIHAGMETVK 180
           QQVV TMLSKGYVLTKDALVKAKAFDDSCQVSA+AAAKVSELSNRIGLTDAIH GMETVK
Sbjct: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGMETVK 180

Query: 181 YIDEKYHVSDITKSAAVVTGTAAVVAVGVTGKAAMAAGNAVVNSRYFSKGALWVSDMLSR 240
           YIDEKYHVSDIT+S A+VTGTAAVVA+GV GKAAMAAG AVVNS YFSKGALWVSDMLSR
Sbjct: 181 YIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVSDMLSR 240

Query: 241 ASKAAAEVGMKNSNGITKL 256
           ASKAAAEVG +NS GITKL
Sbjct: 241 ASKAAAEVGTRNSKGITKL 259

[Close]

BLAST of Sed0026338 vs. ExPASy TrEMBL
Match: A0A6J1GLT3 (binding partner of ACD11 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455139 PE=4 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 1.2e-117
Identity = 228/259 (88.03%), Postives = 238/259 (91.89%), Query Frame = 0


Query: 1   MYSGGYTAEVTSLSPKATENDVYDFFNHCGAVEHVEILRSGDYACTAYVTFRDAFALETA 60
           MYSGGYTAEVTSLSPKATENDVYDFF+HCGAV+HVEILRSGDYACTAYVTFRDAFALETA
Sbjct: 43  MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETA 102

Query: 61  ILLSGAEILDQCVFISRWGNYSDESDTWDR----TDDNTSLTVTEIMHSVYTPGEAVTVA 120
           ILLSGAEILDQCVFI RWG Y+DES  W+     TD+NTS  V EIMHS YTPGEAVTVA
Sbjct: 103 ILLSGAEILDQCVFIGRWGTYTDESYNWNNPSQMTDNNTSPMVAEIMHSAYTPGEAVTVA 162

Query: 121 QQVVTTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTDAIHAGMETVK 180
           QQVV TMLSKGYVLTKDALVKAKAFDDSCQVSA+AAAKVSELSNRIGLTDAIH GMETVK
Sbjct: 163 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGMETVK 222

Query: 181 YIDEKYHVSDITKSAAVVTGTAAVVAVGVTGKAAMAAGNAVVNSRYFSKGALWVSDMLSR 240
           YIDEKYHVSDIT+S A+VTGTAAVVA+GV GKAAMAAG AVVNS YFSKGALWVSDMLSR
Sbjct: 223 YIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVSDMLSR 282

Query: 241 ASKAAAEVGMKNSNGITKL 256
           ASKAAAEVG +NS GITKL
Sbjct: 283 ASKAAAEVGTRNSKGITKL 301

[Close]

BLAST of Sed0026338 vs. ExPASy TrEMBL
Match: A0A6J1GLU2 (binding partner of ACD11 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455139 PE=4 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 1.2e-117
Identity = 228/259 (88.03%), Postives = 238/259 (91.89%), Query Frame = 0


Query: 1   MYSGGYTAEVTSLSPKATENDVYDFFNHCGAVEHVEILRSGDYACTAYVTFRDAFALETA 60
           MYSGGYTAEVTSLSPKATENDVYDFF+HCGAV+HVEILRSGDYACTAYVTFRDAFALETA
Sbjct: 40  MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETA 99

Query: 61  ILLSGAEILDQCVFISRWGNYSDESDTWDR----TDDNTSLTVTEIMHSVYTPGEAVTVA 120
           ILLSGAEILDQCVFI RWG Y+DES  W+     TD+NTS  V EIMHS YTPGEAVTVA
Sbjct: 100 ILLSGAEILDQCVFIGRWGTYTDESYNWNNPSQMTDNNTSPMVAEIMHSAYTPGEAVTVA 159

Query: 121 QQVVTTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTDAIHAGMETVK 180
           QQVV TMLSKGYVLTKDALVKAKAFDDSCQVSA+AAAKVSELSNRIGLTDAIH GMETVK
Sbjct: 160 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGMETVK 219

Query: 181 YIDEKYHVSDITKSAAVVTGTAAVVAVGVTGKAAMAAGNAVVNSRYFSKGALWVSDMLSR 240
           YIDEKYHVSDIT+S A+VTGTAAVVA+GV GKAAMAAG AVVNS YFSKGALWVSDMLSR
Sbjct: 220 YIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVSDMLSR 279

Query: 241 ASKAAAEVGMKNSNGITKL 256
           ASKAAAEVG +NS GITKL
Sbjct: 280 ASKAAAEVGTRNSKGITKL 298

[Close]

BLAST of Sed0026338 vs. ExPASy TrEMBL
Match: A0A6J1JU47 (binding partner of ACD11 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487859 PE=4 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 2.2e-116
Identity = 226/259 (87.26%), Postives = 237/259 (91.51%), Query Frame = 0


Query: 1   MYSGGYTAEVTSLSPKATENDVYDFFNHCGAVEHVEILRSGDYACTAYVTFRDAFALETA 60
           MYSGGY AEVTSLSPKATENDVYDFF+HCGAV+HVEILRSGDYACTAYVTFRDAFALETA
Sbjct: 54  MYSGGYAAEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETA 113

Query: 61  ILLSGAEILDQCVFISRWGNYSDESDTWD----RTDDNTSLTVTEIMHSVYTPGEAVTVA 120
           ILLSGAEILDQCVFI RWG Y+DES  W+     T+DNTS  V EIMHS YTPGEAVTVA
Sbjct: 114 ILLSGAEILDQCVFIGRWGTYTDESYNWNSPSQMTNDNTSPMVAEIMHSAYTPGEAVTVA 173

Query: 121 QQVVTTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTDAIHAGMETVK 180
           QQVV TMLSKGYVLTKDALVKAKAFDDSCQVSA+AAAKVSELSNRIGLTDAIH GMETVK
Sbjct: 174 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGMETVK 233

Query: 181 YIDEKYHVSDITKSAAVVTGTAAVVAVGVTGKAAMAAGNAVVNSRYFSKGALWVSDMLSR 240
           YIDEKYHVSDIT+S A+VTGTAAVVA+GV GKAAMAAG AVVNS YFSKGALWVS+MLSR
Sbjct: 234 YIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVSNMLSR 293

Query: 241 ASKAAAEVGMKNSNGITKL 256
           ASKAAAEVG +NS GITKL
Sbjct: 294 ASKAAAEVGTRNSKGITKL 312

[Close]

BLAST of Sed0026338 vs. ExPASy TrEMBL
Match: A0A6J1JS70 (binding partner of ACD11 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487859 PE=4 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 2.2e-116
Identity = 226/259 (87.26%), Postives = 237/259 (91.51%), Query Frame = 0


Query: 1   MYSGGYTAEVTSLSPKATENDVYDFFNHCGAVEHVEILRSGDYACTAYVTFRDAFALETA 60
           MYSGGY AEVTSLSPKATENDVYDFF+HCGAV+HVEILRSGDYACTAYVTFRDAFALETA
Sbjct: 1   MYSGGYAAEVTSLSPKATENDVYDFFSHCGAVDHVEILRSGDYACTAYVTFRDAFALETA 60

Query: 61  ILLSGAEILDQCVFISRWGNYSDESDTWD----RTDDNTSLTVTEIMHSVYTPGEAVTVA 120
           ILLSGAEILDQCVFI RWG Y+DES  W+     T+DNTS  V EIMHS YTPGEAVTVA
Sbjct: 61  ILLSGAEILDQCVFIGRWGTYTDESYNWNSPSQMTNDNTSPMVAEIMHSAYTPGEAVTVA 120

Query: 121 QQVVTTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTDAIHAGMETVK 180
           QQVV TMLSKGYVLTKDALVKAKAFDDSCQVSA+AAAKVSELSNRIGLTDAIH GMETVK
Sbjct: 121 QQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSASAAAKVSELSNRIGLTDAIHTGMETVK 180

Query: 181 YIDEKYHVSDITKSAAVVTGTAAVVAVGVTGKAAMAAGNAVVNSRYFSKGALWVSDMLSR 240
           YIDEKYHVSDIT+S A+VTGTAAVVA+GV GKAAMAAG AVVNS YFSKGALWVS+MLSR
Sbjct: 181 YIDEKYHVSDITRSTAMVTGTAAVVAMGVAGKAAMAAGTAVVNSSYFSKGALWVSNMLSR 240

Query: 241 ASKAAAEVGMKNSNGITKL 256
           ASKAAAEVG +NS GITKL
Sbjct: 241 ASKAAAEVGTRNSKGITKL 259

[Close]

BLAST of Sed0026338 vs. TAIR 10
Match: AT3G01210.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 258.5 bits (659), Expect = 5.8e-69
Identity = 146/250 (58.40%), Postives = 183/250 (73.20%), Query Frame = 0


Query: 1   MYSGGYTAEVTSLSPKATENDVYDFFNHCGAVEHVEILRSGDYACTAYVTFRDAFALETA 60
           MY  GY A+VT+LSP+ATE DV+ FF+HCG VE VEI      A TAYVTFRDA+AL+ A
Sbjct: 1   MYPCGYVAQVTNLSPQATEKDVHRFFSHCGIVELVEITGCQGDALTAYVTFRDAYALDMA 60

Query: 61  ILLSGAEILDQCVFISRWGNYSDESDTWDRTDDNTSLTVTEIMHSVYTPGEAVTVAQQVV 120
           +LLSGA I+DQ V+IS +G Y  ES+   R +++ S+TVT       +PGEA+TVAQQVV
Sbjct: 61  VLLSGATIVDQTVWISVYGVYLHESNNL-RQEEDYSVTVTRSDAFASSPGEAITVAQQVV 120

Query: 121 TTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTDAIHAGMETVKYIDE 180
            TML+KGYVL+KDA+ KAKA D+S + S+  A K++E+S+ +GLT  I + ME V+  DE
Sbjct: 121 QTMLAKGYVLSKDAIGKAKALDESQRFSSLVATKLAEISHYLGLTQNIQSSMELVRSADE 180

Query: 181 KYHVSDITKSAAVVTGTAAVVAVGVTGKAAMAAGNAVVNSRYFSKGALWVSDMLSRASKA 240
           KYH SD TKSA +VTGTAAV A  +TGK A AA  +VVNSRYF+ GALW SD L RA+KA
Sbjct: 181 KYHFSDFTKSAVLVTGTAAVAAATITGKVAAAAATSVVNSRYFANGALWFSDALGRAAKA 240

Query: 241 AAEVGMKNSN 251
           AA +G   SN
Sbjct: 241 AAHIGGGGSN 249

[Close]

BLAST of Sed0026338 vs. TAIR 10
Match: AT1G14340.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 228.4 bits (581), Expect = 6.4e-60
Identity = 127/248 (51.21%), Postives = 167/248 (67.34%), Query Frame = 0


Query: 5   GYTAEVTSLSPKATENDVYDFFNHCGAVEHVEILRSGDYACTAYVTFRDAFALETAILLS 64
           GY  EVT LSP  T ND+ DFF+  G ++ ++I+RSG+ ACTAYV F+D+++ ETA+LL+
Sbjct: 6   GYGVEVTGLSPSVTHNDLIDFFSFSGTIQDIDIVRSGEQACTAYVMFKDSYSQETAVLLT 65

Query: 65  GAEILDQCVFISRWGNYSDESDTWDRTD---DNTSLTVTEIMHSVYTPGEAVTVAQQVVT 124
           GA ILDQ V I+RWG + +E D W+ T    ++ S +      S +  GEAVT AQ+VV 
Sbjct: 66  GATILDQRVCITRWGQHHEEFDFWNATSRGFEDESDSQHYAQRSEFNAGEAVTKAQEVVK 125

Query: 125 TMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTDAIHAGMETVKYIDEK 184
            ML+ G+VL KDAL KAKAFD+S  VSA A A+VS+L  RIGLTD I  G+E V+  D++
Sbjct: 126 IMLATGFVLGKDALSKAKAFDESHGVSAAAVARVSQLEQRIGLTDKIFTGLEAVRMTDQR 185

Query: 185 YHVSDITKSAAVVTGTAAVVAVGVTGKAAMAAGNAVVNSRYFSKGALWVSDMLSRASKAA 244
           YHVSD  KS           AV  TG+ A AA  +VVNS YFS GALW+S  L RA+KAA
Sbjct: 186 YHVSDTAKS-----------AVFATGRTAAAAATSVVNSSYFSSGALWLSGALERAAKAA 242

Query: 245 AEVGMKNS 250
           +++G + S
Sbjct: 246 SDLGTRGS 242

[Close]

BLAST of Sed0026338 vs. TAIR 10
Match: AT5G46870.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 134.8 bits (338), Expect = 9.7e-32
Identity = 89/249 (35.74%), Postives = 140/249 (56.22%), Query Frame = 0


Query: 7   TAEVTSLSPKATENDVYDFFNHCGAVEHVEILRSGDYACTAYVTFRDAFALETAILLSGA 66
           T +V+++S +ATE D+ +FF+  G + ++E     D +  AYVTF+D    ETA+LL+G+
Sbjct: 5   TVKVSNVSLEATERDLKEFFSFSGDIAYLETQSENDGSKLAYVTFKDLQGAETAVLLTGS 64

Query: 67  EILDQCVFISRWGNYSDESDTW----DRTDDNTSLTVTEIMHSVYTPGEAVTVAQQVVTT 126
            I+D  V ++   +Y    D         + N S + T    SV+        A+ VV+ 
Sbjct: 65  TIVDSSVTVTMSPDYQLPPDALASIESLKESNKSSSPTREDVSVFRK------AEDVVSG 124

Query: 127 MLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTDAIHAG----METVKYI 186
           M+SKG+VL KDA+ KAK+ D+  Q+++TA+A+V+    RIG T+ I+ G     E VK +
Sbjct: 125 MISKGFVLGKDAIAKAKSLDEKHQLTSTASARVTSFDKRIGFTEKINTGTTVVSEKVKEV 184

Query: 187 DEKYHVSDITKSAAVVTGTAAVVAVGVTGKAAMAAGNAVVNSRYFSKGALWVSDMLSRAS 246
           D+K+ V++ TKS           A+    +    AG+A++ +RY   GA WV+   +R S
Sbjct: 185 DQKFQVTEKTKS-----------AIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNRVS 236

Query: 247 KAAAEVGMK 248
           KAA EVG K
Sbjct: 245 KAAEEVGQK 236

[Close]

BLAST of Sed0026338 vs. TAIR 10
Match: AT4G17720.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 133.7 bits (335), Expect = 2.2e-31
Identity = 86/245 (35.10%), Postives = 136/245 (55.51%), Query Frame = 0


Query: 7   TAEVTSLSPKATENDVYDFFNHCGAVEHVEILRSGDYACTAYVTFRDAFALETAILLSGA 66
           T +V+++S  AT+ D+ +FF+  G + ++E     +    AYVTF+D    ETA+LLSGA
Sbjct: 5   TVKVSNVSLGATDRDLKEFFSFSGDILYLETQSETERTKLAYVTFKDLQGAETAVLLSGA 64

Query: 67  EILDQCVFISRWGNYSDESDTWDRTDDNTSLTVTEIMHSVYTPGEAVTVAQQVVTTMLSK 126
            I+D  V +S   +Y    +         SL   +   S       +  A+ VV++ML+K
Sbjct: 65  TIVDSSVIVSMAPDYQLSPEAL------ASLEPKDSNKSPKAGDSVLRKAEDVVSSMLAK 124

Query: 127 GYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTDAIHAGM----ETVKYIDEKY 186
           G++L KDA+ KAK+ D+  Q+++TA+AKV+    +IG TD I+ G     E V+ +D+KY
Sbjct: 125 GFILGKDAIAKAKSVDEKHQLTSTASAKVASFDKKIGFTDKINTGTVVVGEKVREVDQKY 184

Query: 187 HVSDITKSAAVVTGTAAVVAVGVTGKAAMAAGNAVVNSRYFSKGALWVSDMLSRASKAAA 246
            VS+ TKS           A+    +    AG+A++ +RY   GA WV+   ++ +KAA 
Sbjct: 185 QVSEKTKS-----------AIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNKVAKAAE 232

Query: 247 EVGMK 248
           EVG K
Sbjct: 245 EVGQK 232

[Close]

BLAST of Sed0026338 vs. TAIR 10
Match: AT5G32450.1 (RNA binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 131.7 bits (330), Expect = 8.2e-31
Identity = 92/252 (36.51%), Postives = 137/252 (54.37%), Query Frame = 0


Query: 7   TAEVTSLSPKATENDVYDFFNHCGAVEHVEILRSGDYACTAYVTFRDAFALETAILLSGA 66
           + +V ++S  ATE ++++FF+  G +EH+EI +    +  A+VTF D  ALE A+LLSGA
Sbjct: 6   SVQVNNVSDLATEREIHEFFSFSGDIEHIEIQKEFGQSRIAFVTFTDPKALEIALLLSGA 65

Query: 67  EILDQCVFISRWGNYSDESDTWD--RTDDNTSLTVTEIMHSVYTPGEA-----VTVAQQV 126
            I+DQ V I+R  NY    +T +    D+   L + E      T  +      V+ AQ V
Sbjct: 66  TIVDQIVTITRAENYVQRRETQEVRMLDNAMPLGLQESTTQTKTNMDGNSRAYVSKAQDV 125

Query: 127 VTTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTDAIHAGM----ETV 186
           V T+L+KG  L +DA+ KAKAFD+  Q+ A A+AKVS    R+GLT+ +  G+    E V
Sbjct: 126 VATVLAKGSALGQDAVNKAKAFDEKHQLRANASAKVSSFDKRVGLTEKLSVGISAVNEKV 185

Query: 187 KYIDEKYHVSDITKSAAVVTGTAAVVAVGVTGKAAMAAGNAVVNSRYFSKGALWVSDMLS 246
           K +D+K  VSD T           + A+    +     G+AV +SRY + GA W S   S
Sbjct: 186 KSVDQKLQVSDKT-----------MAAIFAAERKLNDTGSAVKSSRYVTAGAAWFSGAFS 245

Query: 247 RASKAAAEVGMK 248
           + ++     G K
Sbjct: 246 KVARVGQVAGSK 246

The following BLAST results are available for this feature:

BLAST of Sed0026338 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023513532.1	6.4e-118	88.42	binding partner of ACD11 1-like [Cucurbita pepo subsp. pepo] >XP_023513538.1 bin...	[more]
XP_022952460.1	2.4e-117	88.03	binding partner of ACD11 1-like isoform X1 [Cucurbita moschata]	[more]
XP_022952469.1	2.4e-117	88.03	binding partner of ACD11 1-like isoform X2 [Cucurbita moschata] >KAG6602486.1 Bi...	[more]
XP_022952477.1	2.4e-117	88.03	binding partner of ACD11 1-like isoform X3 [Cucurbita moschata]	[more]
XP_022991190.1	4.6e-116	87.26	binding partner of ACD11 1-like isoform X2 [Cucurbita maxima]	[more]

BLAST of Sed0026338 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFD5	8.3e-28	34.80	Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1	[more]

BLAST of Sed0026338 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GKI7	1.2e-117	88.03	binding partner of ACD11 1-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1GLT3	1.2e-117	88.03	binding partner of ACD11 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1GLU2	1.2e-117	88.03	binding partner of ACD11 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1JU47	2.2e-116	87.26	binding partner of ACD11 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1JS70	2.2e-116	87.26	binding partner of ACD11 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of Sed0026338 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01210.1	5.8e-69	58.40	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G14340.1	6.4e-60	51.21	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G46870.1	9.7e-32	35.74	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G17720.1	2.2e-31	35.10	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G32450.1	8.2e-31	36.51	RNA binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR32343	SERINE/ARGININE-RICH SPLICING FACTOR	coord: 8..196
None	No IPR available	PANTHER	PTHR32343:SF16	RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN	coord: 8..196

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0026338.1	Sed0026338.1	mRNA
Sed0026338.2	Sed0026338.2	mRNA
Sed0026338.3	Sed0026338.3	mRNA
Sed0026338.4	Sed0026338.4	mRNA
Sed0026338.5	Sed0026338.5	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050832	defense response to fungus
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding