Sed0026311 (gene) Chayote v1

Overview


Name	Sed0026311
Type	gene
Organism	Sechium edule (Chayote v1)
Description	E3 ubiquitin ligase BIG BROTHER-like
Location	LG05: 11433037 .. 11438587 (+)
RNA-Seq Expression	Sed0026311
Synteny	Sed0026311

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTATTTGCCATTTTGCACACAAAGAGGAAAGTGCAACTGCTCATCCTCTTCGGTGTCTTCATTCCTTCTCTAATTTCTACACTTTCTGTAATCGCTTTCTTTTCCTAATTCTGTTTGGTTAGTGATCTGCTGTTCTCATCCTCTTCGCGGAAACTATCAATTCGAGAAATGACAAGACAGAGGTTTGATTTTCGCATTACAATGCAATACTCCGTTTTTGTACTGTTTATTGCCATAGCTTAAATTGATTTTAGATGACTTCTTGATTTCGCTCTATTTGTGTACCCGAAAAGCTTTACATCAAATAGTTTCTCATAGATTGGCATCCGCAAACGAATATAAAAATTCTCTGCCCTCCTCCCTCAACCTTAATAGGAGGAGACTGCATCCATCTCAAGACCAATTGCCGATGCTCCACTTATCTTATAAATTGCTAGTGACATTCTCAACATGCCCTTTCAAGGTGGTGTCACTTTTCGGTTCCAATCGGATCCCAATTTGAATACCCATTTGGGCTAGATGAGTTCTAATATGGTGATACCATATTAGATAGCGTAGATATTCATCCCAAAATCAATCGTTGTTGAGTACACCTATCTTATTAGGTTTGGTGGACTCTCCAATTTTTTAACGTGAAACAATAGTGAGATTCTAACCTGCCCCTCAAGATGGTTTTTGTCATTTTTGTGTGCCGGAACAACTTTGGATGCAAGTGAGGCTAGTCACGCCCTACTTTTTTCGCCTGTAATCTAGATCTATCATCTCAATTACTTTCTTTTCCTTGTTGTCTCCATTTTGCTCCCAATTTTCATATTTCCAGGTGTGGCTCTTTATTGGGGATTAGGAATAAATTTACTGTTTGAAGTTTTGTCAAGCAGAACTTTCAGGAAGATTAGGTTTGTTACTGGTCGTTATTTTCCCTTTGATTTCCTAACTTTGCAATATCACTTGTGCCTGAAGAATATTTCTACTGAAACAGTTATCCAAAATGAGCTGGAACTCAAACGTCGAGGTTCATCGCATGAATAATGGTTATCCTTACAGCCCGGCCTCCTTCACTGAATACTTTGAAGGTCTTACATATGATCATGTGAATTTCATTTTTTCTGGTCCCTCACATCCTCAGGTACTTACATTTCTTTGATTGATTTAACAGATGATATTTTGTATGTACCTTCTATTCTGATGCATCTTGCTCCAACTTCCTGATGCATGCTTGATTGGACATTCATTCTCAGGATCCAATAGTTTTTATGTCTGATTTTCATAATTTCAAATGCAAAAGATGAGTTTCCCAATATGGAAGCATAATATTTTCATTCTTTCATTCAGGAGACTATTTGTCCAACAACTAATTCAAGTTACTACAAGTTTGGGCATTCTGATTCTTGGAGCACTTCATGCTTTGATGCTCAATCATTTGAGGTACAAGGTCATGAATCCCCTATTGATGAAAATCGGATGCCGCATGACTTCTCGACAATCCACCATGAACAGAGTTTAGGTAACAGAGCGTGGGGGGAAAATGCTAATCCTAATATTGCCGCCAATAATATGGACTGTAAGGACTAAGATCTAATTTGTTTCAAATTTTCGAATGAATACTTTAGCATATGTCTTTTGTATAGAGTCACTTCCTGCTAAGACTATAGTTAATGACTTTCTATTTTGTTTTTTTGTCTTTTCATGAATTGAGGTACTGGTTTAGAAAAAGCAATTGATGTTATCAATTTTTTGGTTGATTGGAAAACTCGATCTTTATGATGGCATTGACTATTGAGAATTTGAGGGCATGATGGCTATTGACTTTTCCTAATGAAAGTGTGTCCATGCATGCTTGGAAATTATAATGGTTATATGGGTCCAATGGTTTTCTTGTGACTCAGATGTCAAATAAAAATTTCATGTCGAAAATTGGCATTTAGCATTTTAGTCAGTTTTTGAAATGGGTAACTTATTCGATGCATCATATATGGGGTGATTGAAACGGGCGGTTTTGTAAATGAGATGCAGTCACTTCCCATTGATACACATATCTTCTGCCGTATTTCAATTGTTAACTGTAATTACTTTGAGATCATCTTTATATATGTTTACCAAGTATTATTCTGATGTAGTGTTAACTATGTATGCAGCTAGATTAGAGTGTTAAAGTAAAATCTAATAGCAAAATGCTTGTACAAGAGAAAATCTATTCTCTGTCATTTTTAAATTTTGGTTGTAGTTTGTCTCTTGGCTTCTTTGTTATTAAATTAAAATGTGTGTGGAATTTTAAATACCAGTTCCCAATTCAAGTATTTTATATTGGTTTTTCAGGCCCTTGGAGGCATTCAAATTATCAAGAGTATCAGGTCTGCATCTTTTTGATTCATCAACACTTTATGCCATTTTGTTTACAGTTTTAGTTTTATGTTAAGGAGGTTGTCAGTGAGTTACCATACCTTTGACTTAGTGTCTCTGTGGGTATGCATGCTTGCAATCAAGCACATTGCTTGTTTTATACATATGATAAAATAATTCTTGAAAGACATAAAATTGGTTAGAGGTAGAGAATATAGAACAGGAATTCATTTCTAAACGTATGTTGACAACCTAGGTGGTTGTTCGGTTGCTCAATATTTTTGTTTCTAGATTTTTGTTTTAGCCTGTTAGACCTGGAATTTAGTGGTTCCAACGCTCTACAGAAAACTTCTAAATAAATGCATTCCCTAATCAGTTCTACTTTGAAATATGCAGACTATTTGGCAAGATATTATTGATCCTGATAGCATGACTTATGAGGTTAGTGCGGCCGGTTGTGTTTACTTTCCTCGGTAATATTGCGTTTTACCACACAAAATGTGTCTTTCAGCCAGCATGAGTAGCCTAGTGATCAAAAGAACTATAAAAAACCAAAAGTTGAAGTTCAGTCCGTTGTAACCATTTACCTACGAATTAATTTATCCTACGAATTTTTTTGACATTCAAATGTTGTAGGGTCAGGTGGTATGTCTCGTGAAAATAGTCGAGGTACATGCAAACTGGCCTGAACGCTTATGGATATGAAAAAACACACATAAAATGTCTTATCCTGTAAATTTACATGTTTAAGTTTTCTTCACTGCCTAGATATTGTCATTGAACTGTTATTACGGTTACGAAGTCCATGCTGCTGTATAAGAAAATGGCAAAACTAGTAGTAGCCAATTTATTTTATGAAAAGACATGATTTTGGATGCTTTCTTGCTAAGGTATAAAAGAAAGAAGTGCCGACTCAGATTAATTTAAGGACATCTGTCATAACTGTTTGATCTTTTGTTTTGTTATCTTCTTTGTAAATATGTTTCAAAATTTGAAAATTAAGTCTGATTTGATAACCATTTTGAAATCTAAGTTTGTTTTCACTAAGGATTTGATTTCCCTTAACGAAATATTTGAATCCTTGCCAAATTCTAAATTCTAAAACAAGTTTTTGGATGCTACTTTTTTTTAGTTTTCAAATTTTGGTTTCAACTTTAAAAATATAAATAAAATGCAGATATCAAAATAAAGAAAATCAAAGGTTGGAGTGGTTGTCATAGGCATACTTTTCAATAACCAAAAACCAAAACCCAAAATCATAATGGTTATCAAACGAGCAGTAGTTGTTTGAAGTTTTGATTTTGTTTTTGGAAATTGGCCGAGAATTTTAATACTTTCTTCAAAAAATTTACAACCATAGTGCATAAGGAAACGAGCACAAGTTTCAAACTAAAAACTAAAAAGGAAATTATTATGAAAGGCTTTAGTTGTGTATTGCTCATTGTGGATTCTGTTACACTTCTAGCTAGTTTTGTAACAACCTTGAACTTGATTCCTTGGAGGGTCTTATGTATTAAAAAAAGGAAAAGAAACAGCTTGCTTCTTTGAAGGAATCTGCCAGTAGATGCTGCTTTTTAAAAATCCAAAGTTTATTAGACAGGAGTAAGGAACCAGCTGTAAATCCACTTTATACATTATTGACATCAAGGGCTATACTATAATGTGTAAAGTCAAGTGTATGGCTCCTGAATTATTTTGATTACTCTTTTCTACAGAGTGACAGTTTAAAGTAACTTAATTTCAGGAATTAGTAGATTTAGGCGAGACAGTAGGAACTCAAAGTAGAGGCCTTTCGCAAGAACTGATTGCATTGCTTCCAGTATCGAAGTATAAATGTTGGCTTTTCGCGAGGAAGAAATCTAAAAATGAAAGGTAACACTACATTCATTGATTGTCTTACCCCGTACAGTTTTTTAATTTTTCTTATTTTTCTTTTCACTCTGCTCAATTACCTAATTCTTGCGATTCAGTTTTAAAAAATAGGATAAAATATAAATTTAGTCGAAAGTTTTTTTTTTTTTTTTGAGAAAATGTTTTGAAGAAAGTTAGACTTTAGTTCTTATAGTTTAGTCTCTTTAGTTTGAAGAAATATAGAATTTAGTACCTATGGTTTTAAAAACTAGAATTGATAAAACCTAAGAAATACTCTTTTCGTTACTAATAGTTAGCGAATTAAACACTTAAAAATGATTTATTCATGCGTCAATAATGAAATTATGAGTTACGAGATTGATATAACAAAAAAAATATCATATATTTTATACATGAATAATGATTCTCCTTGTTTTCTGGTTTAGTAATGTTGCTAGCCTGAATAAAGAAAACACTTGAGAGTGGGTTGGCTGAGTGGTCTACGACTTGGAGAATACTCATAAAACGCCTTAACCCTTTTCACCGCAAGAACTTTCAGTCAGAATCGATTACACTAAATAATATATATCTTGTATTTTGAAATTATTTTTTTAAGAAAATACATATTAATATAGGTGTGTAATATGCCAAATGGAATACAAACGTGGAGATCAAAGAATCACTCTACCGTGCAAGCACAGATACCATGCCAGTTGCGGTACCAAGTGGCTTAGTATCAACAAGGTAATGTTTTGATATCTTTTGTCCTTTTTTGGGGTAATTTTCTCTGCTTATTCTGTTTTTATTTTTCAACCCAAATTTTTTTTTTTTTTTGAAAAAAATTACTCGTTAATCATGTATTTTTTTTATTTTGAAAAGGAAGCCTTTTATATACAACTGCTGAGTTTTTTTTTTTTTTTTTTAATAAATTCAACTAATCAAACAATTTTGGTATCTATTAGAAAGCCAATAACAAATCCAACAAACTCAGGGATAAAAGTACTATTTATGAGCTTAATTTTTGAAAACCAAAATGATTATTAAGCTGAGGCATGAGGCATTTGGAACAGACCATCATTTTAGCAAATTCATGAACATAATCTCTCTGTTCCAGGCTTGCCCCATTTGCTACACTGAGGTTTTTGGTGACACTTCACAACGTTAAAGAAGCTACCGATCTCATTAGAAAGGGAACCCTTGAAAAGGATTGAAGTTTTTCGTTCTTTTATTATTTCCTCATCTTTTTTTTTTGTGCAATCGTTGTAATCAGAAGAGAAAAAGTGTTTGACATGACTTTATATAGAGGATTGTAGAGCAGAGAGTTGAATATAATTGATTATGATTTTACTTTTCTTTCCT

mRNA sequence

CTTATTTGCCATTTTGCACACAAAGAGGAAAGTGCAACTGCTCATCCTCTTCGGTGTCTTCATTCCTTCTCTAATTTCTACACTTTCTGTAATCGCTTTCTTTTCCTAATTCTGTTTGGTTAGTGATCTGCTGTTCTCATCCTCTTCGCGGAAACTATCAATTCGAGAAATGACAAGACAGAGGTGTGGCTCTTTATTGGGGATTAGGAATAAATTTACTGTTTGAAGTTTTGTCAAGCAGAACTTTCAGGAAGATTAGTTATCCAAAATGAGCTGGAACTCAAACGTCGAGGTTCATCGCATGAATAATGGTTATCCTTACAGCCCGGCCTCCTTCACTGAATACTTTGAAGGTCTTACATATGATCATGTGAATTTCATTTTTTCTGGTCCCTCACATCCTCAGGAGACTATTTGTCCAACAACTAATTCAAGTTACTACAAGTTTGGGCATTCTGATTCTTGGAGCACTTCATGCTTTGATGCTCAATCATTTGAGGTACAAGGTCATGAATCCCCTATTGATGAAAATCGGATGCCGCATGACTTCTCGACAATCCACCATGAACAGAGTTTAGGCCCTTGGAGGCATTCAAATTATCAAGAGTATCAGACTATTTGGCAAGATATTATTGATCCTGATAGCATGACTTATGAGGAATTAGTAGATTTAGGCGAGACAGTAGGAACTCAAAGTAGAGGCCTTTCGCAAGAACTGATTGCATTGCTTCCAGTATCGAAGTATAAATGTTGGCTTTTCGCGAGGAAGAAATCTAAAAATGAAAGGTGTGTAATATGCCAAATGGAATACAAACGTGGAGATCAAAGAATCACTCTACCGTGCAAGCACAGATACCATGCCAGTTGCGGTACCAAGTGGCTTAGTATCAACAAGGCTTGCCCCATTTGCTACACTGAGGTTTTTGGTGACACTTCACAACGTTAAAGAAGCTACCGATCTCATTAGAAAGGGAACCCTTGAAAAGGATTGAAGTTTTTCGTTCTTTTATTATTTCCTCATCTTTTTTTTTTGTGCAATCGTTGTAATCAGAAGAGAAAAAGTGTTTGACATGACTTTATATAGAGGATTGTAGAGCAGAGAGTTGAATATAATTGATTATGATTTTACTTTTCTTTCCT

Coding sequence (CDS)

ATGAGCTGGAACTCAAACGTCGAGGTTCATCGCATGAATAATGGTTATCCTTACAGCCCGGCCTCCTTCACTGAATACTTTGAAGGTCTTACATATGATCATGTGAATTTCATTTTTTCTGGTCCCTCACATCCTCAGGAGACTATTTGTCCAACAACTAATTCAAGTTACTACAAGTTTGGGCATTCTGATTCTTGGAGCACTTCATGCTTTGATGCTCAATCATTTGAGGTACAAGGTCATGAATCCCCTATTGATGAAAATCGGATGCCGCATGACTTCTCGACAATCCACCATGAACAGAGTTTAGGCCCTTGGAGGCATTCAAATTATCAAGAGTATCAGACTATTTGGCAAGATATTATTGATCCTGATAGCATGACTTATGAGGAATTAGTAGATTTAGGCGAGACAGTAGGAACTCAAAGTAGAGGCCTTTCGCAAGAACTGATTGCATTGCTTCCAGTATCGAAGTATAAATGTTGGCTTTTCGCGAGGAAGAAATCTAAAAATGAAAGGTGTGTAATATGCCAAATGGAATACAAACGTGGAGATCAAAGAATCACTCTACCGTGCAAGCACAGATACCATGCCAGTTGCGGTACCAAGTGGCTTAGTATCAACAAGGCTTGCCCCATTTGCTACACTGAGGTTTTTGGTGACACTTCACAACGTTAA

Protein sequence

MSWNSNVEVHRMNNGYPYSPASFTEYFEGLTYDHVNFIFSGPSHPQETICPTTNSSYYKFGHSDSWSTSCFDAQSFEVQGHESPIDENRMPHDFSTIHHEQSLGPWRHSNYQEYQTIWQDIIDPDSMTYEELVDLGETVGTQSRGLSQELIALLPVSKYKCWLFARKKSKNERCVICQMEYKRGDQRITLPCKHRYHASCGTKWLSINKACPICYTEVFGDTSQR

Homology

[Close]

BLAST of Sed0026311 vs. NCBI nr
Match: XP_023532670.1 (E3 ubiquitin ligase BIG BROTHER-like [Cucurbita pepo subsp. pepo] >XP_023532671.1 E3 ubiquitin ligase BIG BROTHER-like [Cucurbita pepo subsp. pepo] >XP_023532672.1 E3 ubiquitin ligase BIG BROTHER-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 402.9 bits (1034), Expect = 1.8e-108
Identity = 190/244 (77.87%), Postives = 204/244 (83.61%), Query Frame = 0


Query: 1   MSWNSNVEVHRMNNGYPYSPASFTEYFEGLTYDHVNFIFSGPSHPQETICPTTNSSYYKF 60
           MSWNSN+EVH M NGYPYS ASF EYFEGLTYDHVNFIFSGPSH QET+CP TNSSYYKF
Sbjct: 1   MSWNSNIEVHCMTNGYPYSTASFMEYFEGLTYDHVNFIFSGPSHSQETVCPATNSSYYKF 60

Query: 61  GHSDSWSTSCFDAQSFEVQGHESPIDENRMPHDFSTIHHEQSLG---------------- 120
            H+DSWS SCFD QSFEVQGHES IDE+RM  +FST+  EQSLG                
Sbjct: 61  EHADSWSASCFDTQSFEVQGHESAIDEHRMQQEFSTVPDEQSLGNRAREENVNPDMASNS 120

Query: 121 ---PWRHSNYQEYQTIWQDIIDPDSMTYEELVDLGETVGTQSRGLSQELIALLPVSKYKC 180
              P RHSNY EYQTIWQDIIDPD+MTYEELVDLGETVG+QSRGLSQELIALLPVSK+KC
Sbjct: 121 MECPRRHSNYHEYQTIWQDIIDPDNMTYEELVDLGETVGSQSRGLSQELIALLPVSKFKC 180

Query: 181 WLFARKKSKNERCVICQMEYKRGDQRITLPCKHRYHASCGTKWLSINKACPICYTEVFGD 226
           WLF+RKKS+ ERCVICQM YK GDQRITLPCKH+YH SCG+KWLSINKACPICYTEVFGD
Sbjct: 181 WLFSRKKSRTERCVICQMNYKYGDQRITLPCKHKYHTSCGSKWLSINKACPICYTEVFGD 240

[Close]

BLAST of Sed0026311 vs. NCBI nr
Match: XP_022995132.1 (E3 ubiquitin ligase BIG BROTHER-like [Cucurbita maxima] >XP_022995133.1 E3 ubiquitin ligase BIG BROTHER-like [Cucurbita maxima] >XP_022995134.1 E3 ubiquitin ligase BIG BROTHER-like [Cucurbita maxima] >XP_022995135.1 E3 ubiquitin ligase BIG BROTHER-like [Cucurbita maxima])

HSP 1 Score: 399.4 bits (1025), Expect = 2.0e-107
Identity = 187/244 (76.64%), Postives = 203/244 (83.20%), Query Frame = 0


Query: 1   MSWNSNVEVHRMNNGYPYSPASFTEYFEGLTYDHVNFIFSGPSHPQETICPTTNSSYYKF 60
           MSWNSN+EVH MNNGYPYS ASF EYFEGLTYDHVNFIFS PSH +ET+CP TNSSYYKF
Sbjct: 1   MSWNSNIEVHCMNNGYPYSTASFMEYFEGLTYDHVNFIFSAPSHSEETVCPATNSSYYKF 60

Query: 61  GHSDSWSTSCFDAQSFEVQGHESPIDENRMPHDFSTIHHEQSLG---------------- 120
            H+DSWS SCFD QSFEVQGHES IDE+RM  +FST+  EQSLG                
Sbjct: 61  EHADSWSASCFDTQSFEVQGHESVIDEHRMQQEFSTVPDEQSLGNRVREENVNPDMASNS 120

Query: 121 ---PWRHSNYQEYQTIWQDIIDPDSMTYEELVDLGETVGTQSRGLSQELIALLPVSKYKC 180
              P RHSNY EYQTIWQDIIDPD+MTYEELVDLGETVG+QSRGLSQELIALLPVSK+KC
Sbjct: 121 MECPRRHSNYHEYQTIWQDIIDPDNMTYEELVDLGETVGSQSRGLSQELIALLPVSKFKC 180

Query: 181 WLFARKKSKNERCVICQMEYKRGDQRITLPCKHRYHASCGTKWLSINKACPICYTEVFGD 226
           W F+RKKS+ ERCVICQM YK GDQRITLPCKH+YH SCG+KWLSINKACPICYTEV+GD
Sbjct: 181 WFFSRKKSRTERCVICQMNYKHGDQRITLPCKHKYHTSCGSKWLSINKACPICYTEVYGD 240

[Close]

BLAST of Sed0026311 vs. NCBI nr
Match: XP_022957965.1 (E3 ubiquitin ligase BIG BROTHER-like [Cucurbita moschata] >XP_022957966.1 E3 ubiquitin ligase BIG BROTHER-like [Cucurbita moschata] >XP_022957967.1 E3 ubiquitin ligase BIG BROTHER-like [Cucurbita moschata] >XP_022957968.1 E3 ubiquitin ligase BIG BROTHER-like [Cucurbita moschata] >KAG7035855.1 E3 ubiquitin ligase BIG BROTHER [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 397.5 bits (1020), Expect = 7.6e-107
Identity = 187/244 (76.64%), Postives = 201/244 (82.38%), Query Frame = 0


Query: 1   MSWNSNVEVHRMNNGYPYSPASFTEYFEGLTYDHVNFIFSGPSHPQETICPTTNSSYYKF 60
           MSWNSN+EVH M NGYPYS ASF EYFEGLTYDHVNFIFSGPSH QET+CP TNSSYYKF
Sbjct: 1   MSWNSNIEVHCMTNGYPYSTASFMEYFEGLTYDHVNFIFSGPSHSQETVCPATNSSYYKF 60

Query: 61  GHSDSWSTSCFDAQSFEVQGHESPIDENRMPHDFSTIHHEQSLG---------------- 120
            H+DSWS SCFD  SFEVQGHES IDE+RM  +FS +  EQSLG                
Sbjct: 61  EHADSWSASCFDTPSFEVQGHESAIDEHRMQQEFSPVPDEQSLGNRAREENVNPDMASNS 120

Query: 121 ---PWRHSNYQEYQTIWQDIIDPDSMTYEELVDLGETVGTQSRGLSQELIALLPVSKYKC 180
              P RHSNY EYQTIWQDIIDPD+MTYEELVDLGETVG+QSRGLSQELIALLPVSK+KC
Sbjct: 121 MECPRRHSNYHEYQTIWQDIIDPDNMTYEELVDLGETVGSQSRGLSQELIALLPVSKFKC 180

Query: 181 WLFARKKSKNERCVICQMEYKRGDQRITLPCKHRYHASCGTKWLSINKACPICYTEVFGD 226
           W F+RKKS+ ERCVICQM YK GDQRITLPCKH+YH SCG+KWLSINKACPICYTEVFGD
Sbjct: 181 WFFSRKKSRTERCVICQMNYKHGDQRITLPCKHKYHTSCGSKWLSINKACPICYTEVFGD 240

[Close]

BLAST of Sed0026311 vs. NCBI nr
Match: KAG6605908.1 (E3 ubiquitin-protein ligase BIG BROTHER, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 397.5 bits (1020), Expect = 7.6e-107
Identity = 187/244 (76.64%), Postives = 201/244 (82.38%), Query Frame = 0


Query: 1   MSWNSNVEVHRMNNGYPYSPASFTEYFEGLTYDHVNFIFSGPSHPQETICPTTNSSYYKF 60
           MSWNSN+EVH M NGYPYS ASF EYFEGLTYDHVNFIFSGPSH QET+CP TNSSYYKF
Sbjct: 72  MSWNSNIEVHCMTNGYPYSTASFMEYFEGLTYDHVNFIFSGPSHSQETVCPATNSSYYKF 131

Query: 61  GHSDSWSTSCFDAQSFEVQGHESPIDENRMPHDFSTIHHEQSLG---------------- 120
            H+DSWS SCFD  SFEVQGHES IDE+RM  +FS +  EQSLG                
Sbjct: 132 EHADSWSASCFDTPSFEVQGHESAIDEHRMQQEFSPVPDEQSLGNRAREENVNPDMASNS 191

Query: 121 ---PWRHSNYQEYQTIWQDIIDPDSMTYEELVDLGETVGTQSRGLSQELIALLPVSKYKC 180
              P RHSNY EYQTIWQDIIDPD+MTYEELVDLGETVG+QSRGLSQELIALLPVSK+KC
Sbjct: 192 MECPRRHSNYHEYQTIWQDIIDPDNMTYEELVDLGETVGSQSRGLSQELIALLPVSKFKC 251

Query: 181 WLFARKKSKNERCVICQMEYKRGDQRITLPCKHRYHASCGTKWLSINKACPICYTEVFGD 226
           W F+RKKS+ ERCVICQM YK GDQRITLPCKH+YH SCG+KWLSINKACPICYTEVFGD
Sbjct: 252 WFFSRKKSRTERCVICQMNYKHGDQRITLPCKHKYHTSCGSKWLSINKACPICYTEVFGD 311

[Close]

BLAST of Sed0026311 vs. NCBI nr
Match: XP_038901510.1 (E3 ubiquitin-protein ligase BIG BROTHER-like [Benincasa hispida])

HSP 1 Score: 391.0 bits (1003), Expect = 7.1e-105
Identity = 192/244 (78.69%), Postives = 202/244 (82.79%), Query Frame = 0


Query: 1   MSWNSNVEVHRMNNGYPYSPASFTEYFEGLTYDHVNFIFSGPSHPQETICPTTNSSYYKF 60
           MSWNSN+EVH MNNGYPYS ASF EYFEGLTYDHVNFIFSG SH QETI P TNSSYYKF
Sbjct: 1   MSWNSNIEVHCMNNGYPYSTASFMEYFEGLTYDHVNFIFSGASHSQETIYPLTNSSYYKF 60

Query: 61  GHSDSWSTSCFDAQSFEVQGHESPIDENRMPHDFSTIHHEQSLG---------------- 120
           GHSDSWSTS FDAQSFE+QGHES IDE+R     ST  +EQSLG                
Sbjct: 61  GHSDSWSTSHFDAQSFEIQGHESTIDEHR--RLLSTAPNEQSLGNRVWEENANPNMSSNN 120

Query: 121 ---PWRHSNYQEYQTIWQDIIDPDSMTYEELVDLGETVGTQSRGLSQELIALLPVSKYKC 180
              P RHSNY EYQTIWQDI+DPD+MTYEELVDLGETVGTQSRGLSQELI+LLPVSKYKC
Sbjct: 121 MECPRRHSNYHEYQTIWQDIVDPDNMTYEELVDLGETVGTQSRGLSQELISLLPVSKYKC 180

Query: 181 WLFARKKSKNERCVICQMEYKRGDQRITLPCKHRYHASCGTKWLSINKACPICYTEVFGD 226
             F R KS+NERCVICQMEYKRGDQRITLPCKHRYH SCGTKWLSINKACPICYTEVFGD
Sbjct: 181 GFFLRNKSRNERCVICQMEYKRGDQRITLPCKHRYHTSCGTKWLSINKACPICYTEVFGD 240

[Close]

BLAST of Sed0026311 vs. ExPASy Swiss-Prot
Match: Q8L649 (E3 ubiquitin-protein ligase BIG BROTHER OS=Arabidopsis thaliana OX=3702 GN=BB PE=1 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 3.3e-44
Identity = 98/239 (41.00%), Postives = 138/239 (57.74%), Query Frame = 0


Query: 8   EVHRMNNGYPY-SPASFTEYFEGLTYDHVNFIFSGPSHPQETICPTTNSSYYKFGHSDSW 67
           + H    G+PY +  S+ +++ G     +N+  +   HPQ+ +  T N++ YKFG S S 
Sbjct: 10  DAHYTETGFPYAATGSYMDFYGGAAQGPLNYDHAATMHPQDNLYWTMNTNAYKFGFSGSD 69

Query: 68  STSCFDAQSFEVQGHESPIDENRMPHDF-----------STIHHEQSLGPW-RHSNYQEY 127
           + S +   S+++  H S +   R   D+           +T+     +G    HS  +E 
Sbjct: 70  NASFYG--SYDMNDHLSRMSIGRTNWDYHPMVNVADDPENTVARSVQIGDTDEHSEAEEC 129

Query: 128 ----------QTIWQDIIDPDSMTYEELVDLGETVGTQSRGLSQELIALLPVSKYKCWLF 187
                     Q  WQD IDPD+MTYEELV+LGE VGT+SRGLSQELI  LP  KYK    
Sbjct: 130 IANEHDPDSPQVSWQDDIDPDTMTYEELVELGEAVGTESRGLSQELIETLPTKKYKFGSI 189

Query: 188 ARKKSKNERCVICQMEYKRGDQRITLPCKHRYHASCGTKWLSINKACPICYTEVFGDTS 224
             +K   ERCVICQ++YK G++++ LPCKH YH+ C +KWLSINK CP+C +EVFG+ S
Sbjct: 190 FSRKRAGERCVICQLKYKIGERQMNLPCKHVYHSECISKWLSINKVCPVCNSEVFGEPS 246

[Close]

BLAST of Sed0026311 vs. ExPASy Swiss-Prot
Match: Q9LT17 (E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana OX=3702 GN=BBR PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 2.2e-24
Identity = 54/109 (49.54%), Postives = 70/109 (64.22%), Query Frame = 0


Query: 115 QTIWQDIIDPDSMTYEELVDLGETVGTQSRGLSQELIALLPVSKYKCWLFARKKSKNERC 174
           Q  W D +DPD ++YEEL+ LG+ VGT+SRGLS + IA LP  +YK      +   NE C
Sbjct: 232 QDAW-DEMDPDELSYEELLALGDIVGTESRGLSADTIASLPSKRYK--EGDNQNGTNESC 291

Query: 175 VICQMEYKRGDQRITLPCKHRYHASCGTKWLSINKACPICYTEVFGDTS 224
           VIC+++Y+  +  I LPCKH YH+ C   WL INK CP+C  EV   TS
Sbjct: 292 VICRLDYEDDEDLILLPCKHSYHSECINNWLKINKVCPVCSAEVSTSTS 337

[Close]

BLAST of Sed0026311 vs. ExPASy Swiss-Prot
Match: O49500 (E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana OX=3702 GN=MBR2 PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 9.3e-15
Identity = 39/95 (41.05%), Postives = 52/95 (54.74%), Query Frame = 0


Query: 122 IDPDSMTYEELVDLGETVGTQSRGLSQELIALLPVSKYKCWLFARKKSKNERCVICQMEY 181
           +D D+M+YEEL+ LGE +G  S GLS+E+I  +          A      E C +CQ EY
Sbjct: 567 LDVDNMSYEELLALGERIGDVSTGLSEEVILKVMKQHKHTSSAAGSHQDMEPCCVCQEEY 626

Query: 182 KRGDQRITLPCKHRYHASCGTKWLSINKACPICYT 217
             GD   TL C H +H +C  +WL +   CPIC T
Sbjct: 627 AEGDDLGTLGCGHEFHTACVKQWLMLKNLCPICKT 661

[Close]

BLAST of Sed0026311 vs. ExPASy Swiss-Prot
Match: Q7XTV7 (Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza sativa subsp. japonica OX=39947 GN=HIP1 PE=1 SV=2)

HSP 1 Score: 80.1 bits (196), Expect = 3.5e-14
Identity = 40/94 (42.55%), Postives = 52/94 (55.32%), Query Frame = 0


Query: 122 IDPDSMTYEELVDLGETVGTQSRGLSQELIA-LLPVSKYKCWLFARKKSKNERCVICQME 181
           +D D+M+YEEL+ L E +G  S GLS+E +  LL   K+  W       + E C ICQ E
Sbjct: 568 LDIDNMSYEELLALEERIGNVSTGLSEEEVTKLLKQRKFSSWRL-EASVEEEPCCICQEE 627

Query: 182 YKRGDQRITLPCKHRYHASCGTKWLSINKACPIC 215
           Y  GD   TL C H +H  C  +WL +   CPIC
Sbjct: 628 YVDGDDLGTLDCGHDFHVGCVRQWLVVKNTCPIC 660

[Close]

BLAST of Sed0026311 vs. ExPASy Swiss-Prot
Match: Q9ZQF9 (E3 ubiquitin-protein ligase MBR1 OS=Arabidopsis thaliana OX=3702 GN=MBR1 PE=1 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 6.0e-14
Identity = 42/100 (42.00%), Postives = 56/100 (56.00%), Query Frame = 0


Query: 122 IDPDSMTYEELVDLGETVGTQSRGLSQELIALLPVSKYKCWLFARKK----SKNERCVIC 181
           +D D+M+YEEL+ LGE +G  S GLS+E+I L  + ++K    +          E C IC
Sbjct: 601 LDVDNMSYEELLALGERIGDVSTGLSEEVI-LKAMKQHKHTSSSPSSVELHQNIEPCCIC 660

Query: 182 QMEYKRGDQRITLPCKHRYHASCGTKWLSINKACPICYTE 218
           Q EY  GD   TL C H +H  C  +W+ I   CPIC TE
Sbjct: 661 QEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPICKTE 699

[Close]

BLAST of Sed0026311 vs. ExPASy TrEMBL
Match: A0A6J1K714 (E3 ubiquitin ligase BIG BROTHER-like OS=Cucurbita maxima OX=3661 GN=LOC111490765 PE=4 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 9.7e-108
Identity = 187/244 (76.64%), Postives = 203/244 (83.20%), Query Frame = 0


Query: 1   MSWNSNVEVHRMNNGYPYSPASFTEYFEGLTYDHVNFIFSGPSHPQETICPTTNSSYYKF 60
           MSWNSN+EVH MNNGYPYS ASF EYFEGLTYDHVNFIFS PSH +ET+CP TNSSYYKF
Sbjct: 1   MSWNSNIEVHCMNNGYPYSTASFMEYFEGLTYDHVNFIFSAPSHSEETVCPATNSSYYKF 60

Query: 61  GHSDSWSTSCFDAQSFEVQGHESPIDENRMPHDFSTIHHEQSLG---------------- 120
            H+DSWS SCFD QSFEVQGHES IDE+RM  +FST+  EQSLG                
Sbjct: 61  EHADSWSASCFDTQSFEVQGHESVIDEHRMQQEFSTVPDEQSLGNRVREENVNPDMASNS 120

Query: 121 ---PWRHSNYQEYQTIWQDIIDPDSMTYEELVDLGETVGTQSRGLSQELIALLPVSKYKC 180
              P RHSNY EYQTIWQDIIDPD+MTYEELVDLGETVG+QSRGLSQELIALLPVSK+KC
Sbjct: 121 MECPRRHSNYHEYQTIWQDIIDPDNMTYEELVDLGETVGSQSRGLSQELIALLPVSKFKC 180

Query: 181 WLFARKKSKNERCVICQMEYKRGDQRITLPCKHRYHASCGTKWLSINKACPICYTEVFGD 226
           W F+RKKS+ ERCVICQM YK GDQRITLPCKH+YH SCG+KWLSINKACPICYTEV+GD
Sbjct: 181 WFFSRKKSRTERCVICQMNYKHGDQRITLPCKHKYHTSCGSKWLSINKACPICYTEVYGD 240

[Close]

BLAST of Sed0026311 vs. ExPASy TrEMBL
Match: A0A6J1H1S6 (E3 ubiquitin ligase BIG BROTHER-like OS=Cucurbita moschata OX=3662 GN=LOC111459339 PE=4 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 3.7e-107
Identity = 187/244 (76.64%), Postives = 201/244 (82.38%), Query Frame = 0


Query: 1   MSWNSNVEVHRMNNGYPYSPASFTEYFEGLTYDHVNFIFSGPSHPQETICPTTNSSYYKF 60
           MSWNSN+EVH M NGYPYS ASF EYFEGLTYDHVNFIFSGPSH QET+CP TNSSYYKF
Sbjct: 1   MSWNSNIEVHCMTNGYPYSTASFMEYFEGLTYDHVNFIFSGPSHSQETVCPATNSSYYKF 60

Query: 61  GHSDSWSTSCFDAQSFEVQGHESPIDENRMPHDFSTIHHEQSLG---------------- 120
            H+DSWS SCFD  SFEVQGHES IDE+RM  +FS +  EQSLG                
Sbjct: 61  EHADSWSASCFDTPSFEVQGHESAIDEHRMQQEFSPVPDEQSLGNRAREENVNPDMASNS 120

Query: 121 ---PWRHSNYQEYQTIWQDIIDPDSMTYEELVDLGETVGTQSRGLSQELIALLPVSKYKC 180
              P RHSNY EYQTIWQDIIDPD+MTYEELVDLGETVG+QSRGLSQELIALLPVSK+KC
Sbjct: 121 MECPRRHSNYHEYQTIWQDIIDPDNMTYEELVDLGETVGSQSRGLSQELIALLPVSKFKC 180

Query: 181 WLFARKKSKNERCVICQMEYKRGDQRITLPCKHRYHASCGTKWLSINKACPICYTEVFGD 226
           W F+RKKS+ ERCVICQM YK GDQRITLPCKH+YH SCG+KWLSINKACPICYTEVFGD
Sbjct: 181 WFFSRKKSRTERCVICQMNYKHGDQRITLPCKHKYHTSCGSKWLSINKACPICYTEVFGD 240

[Close]

BLAST of Sed0026311 vs. ExPASy TrEMBL
Match: A0A1S3BNM5 (E3 ubiquitin ligase BIG BROTHER-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491520 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 4.7e-102
Identity = 184/239 (76.99%), Postives = 200/239 (83.68%), Query Frame = 0


Query: 1   MSWNSNVEVHRMNNGYPYSPASFTEYFEGLTYDHVNFIFSGPSHPQETICPTTNSSYYKF 60
           MSWNSN+EVH MNNGYPYS ASF EYFEGLTYDHVNFIFSG SH Q+T+CP+TNSSYYKF
Sbjct: 1   MSWNSNIEVHCMNNGYPYSTASFMEYFEGLTYDHVNFIFSGASHSQDTVCPSTNSSYYKF 60

Query: 61  GHSDSWSTSCFDAQSFEVQGHESPIDENRMPHDFSTIHHEQSL--------------GPW 120
           G+SD WSTS FDAQ FEVQ HES I E+R P   ST+ +EQSL              GP 
Sbjct: 61  GNSDLWSTSYFDAQLFEVQDHESAIYEHRRP--LSTVQNEQSLGNSVWEENANPNMSGPR 120

Query: 121 RHSNYQEYQTIWQDIIDPDSMTYEELVDLGETVGTQSRGLSQELIALLPVSKYKCWLFAR 180
           RHSNY EYQTIWQDI+DPD+MTYEELVDLGETVGTQSRGL+QELIALLPVS Y+   F+R
Sbjct: 121 RHSNYHEYQTIWQDIVDPDNMTYEELVDLGETVGTQSRGLTQELIALLPVSSYRWGFFSR 180

Query: 181 KKSKNERCVICQMEYKRGDQRITLPCKHRYHASCGTKWLSINKACPICYTEVFGDTSQR 226
           KKS+NERCVICQMEYKRGD+ ITLPCKHRYH SCGTKWLSI KACPICYTEVFGDTS+R
Sbjct: 181 KKSRNERCVICQMEYKRGDKIITLPCKHRYHTSCGTKWLSIKKACPICYTEVFGDTSKR 237

[Close]

BLAST of Sed0026311 vs. ExPASy TrEMBL
Match: A0A1S3BNC2 (E3 ubiquitin ligase BIG BROTHER-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491520 PE=4 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 1.8e-101
Identity = 184/244 (75.41%), Postives = 200/244 (81.97%), Query Frame = 0


Query: 1   MSWNSNVEVHRMNNGYPYSPASFTEYFEGLTYDHVNFIFSGPSHPQETICPTTNSSYYKF 60
           MSWNSN+EVH MNNGYPYS ASF EYFEGLTYDHVNFIFSG SH Q+T+CP+TNSSYYKF
Sbjct: 1   MSWNSNIEVHCMNNGYPYSTASFMEYFEGLTYDHVNFIFSGASHSQDTVCPSTNSSYYKF 60

Query: 61  GHSDSWSTSCFDAQSFEVQGHESPIDENRMPHDFSTIHHEQSLG---------------- 120
           G+SD WSTS FDAQ FEVQ HES I E+R P   ST+ +EQSLG                
Sbjct: 61  GNSDLWSTSYFDAQLFEVQDHESAIYEHRRP--LSTVQNEQSLGNSVWEENANPNMSGNS 120

Query: 121 ---PWRHSNYQEYQTIWQDIIDPDSMTYEELVDLGETVGTQSRGLSQELIALLPVSKYKC 180
              P RHSNY EYQTIWQDI+DPD+MTYEELVDLGETVGTQSRGL+QELIALLPVS Y+ 
Sbjct: 121 MECPRRHSNYHEYQTIWQDIVDPDNMTYEELVDLGETVGTQSRGLTQELIALLPVSSYRW 180

Query: 181 WLFARKKSKNERCVICQMEYKRGDQRITLPCKHRYHASCGTKWLSINKACPICYTEVFGD 226
             F+RKKS+NERCVICQMEYKRGD+ ITLPCKHRYH SCGTKWLSI KACPICYTEVFGD
Sbjct: 181 GFFSRKKSRNERCVICQMEYKRGDKIITLPCKHRYHTSCGTKWLSIKKACPICYTEVFGD 240

[Close]

BLAST of Sed0026311 vs. ExPASy TrEMBL
Match: A0A0A0L1Z5 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G290860 PE=4 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 2.0e-100
Identity = 183/244 (75.00%), Postives = 200/244 (81.97%), Query Frame = 0


Query: 1   MSWNSNVEVHRMNNGYPYSPASFTEYFEGLTYDHVNFIFSGPSHPQETICPTTNSSYYKF 60
           MSWNSN+EVH MNNGYPYS ASF EYFEGLTYDHVNFIFSG SH QET+CP+TNSS YKF
Sbjct: 9   MSWNSNIEVHCMNNGYPYSTASFMEYFEGLTYDHVNFIFSGASHSQETVCPSTNSS-YKF 68

Query: 61  GHSDSWSTSCFDAQSFEVQGHESPIDENRMPHDFSTIHHEQSLG---------------- 120
           GHSD WS S FDAQSFEVQ HES IDE+R P   ST+ +EQS G                
Sbjct: 69  GHSDLWSASYFDAQSFEVQDHESTIDEHRRP--LSTVQNEQSSGNSVWEENANPNMSGNS 128

Query: 121 ---PWRHSNYQEYQTIWQDIIDPDSMTYEELVDLGETVGTQSRGLSQELIALLPVSKYKC 180
              P RHSNY EYQTIWQ+I+DPD+MTYEELVDLGETVGTQSRGL+QELIALLPVS+Y+ 
Sbjct: 129 MECPRRHSNYHEYQTIWQEIVDPDNMTYEELVDLGETVGTQSRGLTQELIALLPVSRYRW 188

Query: 181 WLFARKKSKNERCVICQMEYKRGDQRITLPCKHRYHASCGTKWLSINKACPICYTEVFGD 226
             F+RKKS+NERCVICQMEYKRGD+ ITLPCKH+YH SCGTKWLSI KACPICYTEVFGD
Sbjct: 189 GFFSRKKSRNERCVICQMEYKRGDKIITLPCKHKYHTSCGTKWLSIKKACPICYTEVFGD 248

[Close]

BLAST of Sed0026311 vs. TAIR 10
Match: AT3G63530.1 (RING/U-box superfamily protein )

HSP 1 Score: 179.9 bits (455), Expect = 2.3e-45
Identity = 98/239 (41.00%), Postives = 138/239 (57.74%), Query Frame = 0


Query: 8   EVHRMNNGYPY-SPASFTEYFEGLTYDHVNFIFSGPSHPQETICPTTNSSYYKFGHSDSW 67
           + H    G+PY +  S+ +++ G     +N+  +   HPQ+ +  T N++ YKFG S S 
Sbjct: 10  DAHYTETGFPYAATGSYMDFYGGAAQGPLNYDHAATMHPQDNLYWTMNTNAYKFGFSGSD 69

Query: 68  STSCFDAQSFEVQGHESPIDENRMPHDF-----------STIHHEQSLGPW-RHSNYQEY 127
           + S +   S+++  H S +   R   D+           +T+     +G    HS  +E 
Sbjct: 70  NASFYG--SYDMNDHLSRMSIGRTNWDYHPMVNVADDPENTVARSVQIGDTDEHSEAEEC 129

Query: 128 ----------QTIWQDIIDPDSMTYEELVDLGETVGTQSRGLSQELIALLPVSKYKCWLF 187
                     Q  WQD IDPD+MTYEELV+LGE VGT+SRGLSQELI  LP  KYK    
Sbjct: 130 IANEHDPDSPQVSWQDDIDPDTMTYEELVELGEAVGTESRGLSQELIETLPTKKYKFGSI 189

Query: 188 ARKKSKNERCVICQMEYKRGDQRITLPCKHRYHASCGTKWLSINKACPICYTEVFGDTS 224
             +K   ERCVICQ++YK G++++ LPCKH YH+ C +KWLSINK CP+C +EVFG+ S
Sbjct: 190 FSRKRAGERCVICQLKYKIGERQMNLPCKHVYHSECISKWLSINKVCPVCNSEVFGEPS 246

[Close]

BLAST of Sed0026311 vs. TAIR 10
Match: AT3G63530.2 (RING/U-box superfamily protein )

HSP 1 Score: 179.9 bits (455), Expect = 2.3e-45
Identity = 98/239 (41.00%), Postives = 138/239 (57.74%), Query Frame = 0


Query: 8   EVHRMNNGYPY-SPASFTEYFEGLTYDHVNFIFSGPSHPQETICPTTNSSYYKFGHSDSW 67
           + H    G+PY +  S+ +++ G     +N+  +   HPQ+ +  T N++ YKFG S S 
Sbjct: 10  DAHYTETGFPYAATGSYMDFYGGAAQGPLNYDHAATMHPQDNLYWTMNTNAYKFGFSGSD 69

Query: 68  STSCFDAQSFEVQGHESPIDENRMPHDF-----------STIHHEQSLGPW-RHSNYQEY 127
           + S +   S+++  H S +   R   D+           +T+     +G    HS  +E 
Sbjct: 70  NASFYG--SYDMNDHLSRMSIGRTNWDYHPMVNVADDPENTVARSVQIGDTDEHSEAEEC 129

Query: 128 ----------QTIWQDIIDPDSMTYEELVDLGETVGTQSRGLSQELIALLPVSKYKCWLF 187
                     Q  WQD IDPD+MTYEELV+LGE VGT+SRGLSQELI  LP  KYK    
Sbjct: 130 IANEHDPDSPQVSWQDDIDPDTMTYEELVELGEAVGTESRGLSQELIETLPTKKYKFGSI 189

Query: 188 ARKKSKNERCVICQMEYKRGDQRITLPCKHRYHASCGTKWLSINKACPICYTEVFGDTS 224
             +K   ERCVICQ++YK G++++ LPCKH YH+ C +KWLSINK CP+C +EVFG+ S
Sbjct: 190 FSRKRAGERCVICQLKYKIGERQMNLPCKHVYHSECISKWLSINKVCPVCNSEVFGEPS 246

[Close]

BLAST of Sed0026311 vs. TAIR 10
Match: AT3G19910.1 (RING/U-box superfamily protein )

HSP 1 Score: 114.0 bits (284), Expect = 1.6e-25
Identity = 54/109 (49.54%), Postives = 70/109 (64.22%), Query Frame = 0


Query: 115 QTIWQDIIDPDSMTYEELVDLGETVGTQSRGLSQELIALLPVSKYKCWLFARKKSKNERC 174
           Q  W D +DPD ++YEEL+ LG+ VGT+SRGLS + IA LP  +YK      +   NE C
Sbjct: 232 QDAW-DEMDPDELSYEELLALGDIVGTESRGLSADTIASLPSKRYK--EGDNQNGTNESC 291

Query: 175 VICQMEYKRGDQRITLPCKHRYHASCGTKWLSINKACPICYTEVFGDTS 224
           VIC+++Y+  +  I LPCKH YH+ C   WL INK CP+C  EV   TS
Sbjct: 292 VICRLDYEDDEDLILLPCKHSYHSECINNWLKINKVCPVCSAEVSTSTS 337

[Close]

BLAST of Sed0026311 vs. TAIR 10
Match: AT5G52140.1 (RING/U-box superfamily protein )

HSP 1 Score: 104.0 bits (258), Expect = 1.6e-22
Identity = 51/105 (48.57%), Postives = 65/105 (61.90%), Query Frame = 0


Query: 123 DPDSMTYEELVDLGETVGTQSRGLSQELIALLPVSKY----KCWLFARKKSK----NERC 182
           DP++MTYEEL +LG++VG   +GLSQE I+ L   KY    K W     K K    + +C
Sbjct: 175 DPENMTYEELTELGDSVGDVGKGLSQERISRLRTHKYGTKTKSWYCLHMKKKFVADDSQC 234

Query: 183 VICQMEYKRGDQRITLPCKHRYHASCGTKWLSINKACPICYTEVF 220
            IC MEY +GD+  TLPCKH YH  C ++WL  NK C IC  EV+
Sbjct: 235 SICLMEYAKGDKITTLPCKHIYHKDCISQWLKQNKVCCICKAEVY 279

[Close]

BLAST of Sed0026311 vs. TAIR 10
Match: AT3G47180.1 (RING/U-box superfamily protein )

HSP 1 Score: 98.2 bits (243), Expect = 8.9e-21
Identity = 45/101 (44.55%), Postives = 67/101 (66.34%), Query Frame = 0


Query: 119 QDIIDPDSMTYEELVDLGETVGTQSRGLSQ-ELIALLPVSKYKCWLFARKKSKNERCVIC 178
           +D IDPD ++YEEL+ LG+ +G ++RGL+  E+   L  S Y   +F+  K++ +RCV+C
Sbjct: 109 EDEIDPDQLSYEELIALGDFIGVENRGLTPIEISTCLNASTY---VFSHNKNEIDRCVVC 168

Query: 179 QMEYKRGDQRITL-PCKHRYHASCGTKWLSINKACPICYTE 218
           QME++  +  + L PC H YH+ C TKWL   K CPIC +E
Sbjct: 169 QMEFEERESLVVLRPCDHPYHSECITKWLETKKICPICCSE 206

The following BLAST results are available for this feature:

BLAST of Sed0026311 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023532670.1	1.8e-108	77.87	E3 ubiquitin ligase BIG BROTHER-like [Cucurbita pepo subsp. pepo] >XP_023532671....	[more]
XP_022995132.1	2.0e-107	76.64	E3 ubiquitin ligase BIG BROTHER-like [Cucurbita maxima] >XP_022995133.1 E3 ubiqu...	[more]
XP_022957965.1	7.6e-107	76.64	E3 ubiquitin ligase BIG BROTHER-like [Cucurbita moschata] >XP_022957966.1 E3 ubi...	[more]
KAG6605908.1	7.6e-107	76.64	E3 ubiquitin-protein ligase BIG BROTHER, partial [Cucurbita argyrosperma subsp. ...	[more]
XP_038901510.1	7.1e-105	78.69	E3 ubiquitin-protein ligase BIG BROTHER-like [Benincasa hispida]	[more]

BLAST of Sed0026311 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L649	3.3e-44	41.00	E3 ubiquitin-protein ligase BIG BROTHER OS=Arabidopsis thaliana OX=3702 GN=BB PE...	[more]
Q9LT17	2.2e-24	49.54	E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana OX=3702 GN=BBR P...	[more]
O49500	9.3e-15	41.05	E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana OX=3702 GN=MBR2 PE=1 SV...	[more]
Q7XTV7	3.5e-14	42.55	Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q9ZQF9	6.0e-14	42.00	E3 ubiquitin-protein ligase MBR1 OS=Arabidopsis thaliana OX=3702 GN=MBR1 PE=1 SV...	[more]

BLAST of Sed0026311 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K714	9.7e-108	76.64	E3 ubiquitin ligase BIG BROTHER-like OS=Cucurbita maxima OX=3661 GN=LOC111490765...	[more]
A0A6J1H1S6	3.7e-107	76.64	E3 ubiquitin ligase BIG BROTHER-like OS=Cucurbita moschata OX=3662 GN=LOC1114593...	[more]
A0A1S3BNM5	4.7e-102	76.99	E3 ubiquitin ligase BIG BROTHER-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3BNC2	1.8e-101	75.41	E3 ubiquitin ligase BIG BROTHER-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0L1Z5	2.0e-100	75.00	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G290860 P...	[more]

BLAST of Sed0026311 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G63530.1	2.3e-45	41.00	RING/U-box superfamily protein	[more]
AT3G63530.2	2.3e-45	41.00	RING/U-box superfamily protein	[more]
AT3G19910.1	1.6e-25	49.54	RING/U-box superfamily protein	[more]
AT5G52140.1	1.6e-22	48.57	RING/U-box superfamily protein	[more]
AT3G47180.1	8.9e-21	44.55	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 174..214 e-value: 1.3E-5 score: 34.7
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 173..214 e-value: 5.4E-11 score: 42.7
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 174..214 score: 10.895954
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 135..219 e-value: 2.7E-17 score: 64.2
None	No IPR available	PANTHER	PTHR46400:SF5	RING/U-BOX SUPERFAMILY PROTEIN	coord: 1..223
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 166..220
IPR033276	E3 ubiquitin-protein ligase BIG BROTHER	PANTHER	PTHR46400	RING/U-BOX SUPERFAMILY PROTEIN	coord: 1..223

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0026311.1	Sed0026311.1	mRNA
Sed0026311.2	Sed0026311.2	mRNA
Sed0026311.3	Sed0026311.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046621	negative regulation of organ growth
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0031624	ubiquitin conjugating enzyme binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity