Sed0026275 (gene) Chayote v1

Overview


Name	Sed0026275
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Mitochondrial import inner membrane translocase subunit Tim21
Location	LG03: 3381828 .. 3387600 (+)
RNA-Seq Expression	Sed0026275
Synteny	Sed0026275

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACCGAAACACCCTCCACGAATAAAGGGCTTTATGGGGGGGTTTAACGCCTCTCCTCTAGGGTTTCTCTGTAAACATTTTTTTGTTCATCACATCTGAAAATCAATGGCGAACGGATTGATGAAGCTCGCCACGTTCGTCTCTCGTTCTCGCCTCGGTGCTCAACAATATCTTCAGGTCTCTTCGCATTTCAATTTCGGTCTTTACTCTACTCTACTCTACCAGTTCTGATTTATCGAGTTCTTGCTCGATCGGCGATTGCAATTTCTTTTGTTTCAATCGGGATTTTGAATGAACTGATCCGAACAAAAATGCCGTATACTCATGTGATTTTTCTGCGATTTTTTGTTTTTCTTTGAAAATTAGTAAGTTTGACCGGATGAAATGTGGAATTTGATTTGTCGAGTACTTGCTCGATCGGCGAATGCAATTTCTTTTGTTTCGATTGGAGTTTTAAATGGACTGATTTGCAGAAAAATGCCTTATACTGATGTGGTTTTTCTGCGATTTTTTGTTTTTCTTCGAAAACAGTCAGAAGACCGTGCATAATGATGAAATGTGGAATTTGATTTATCGAATTCAGGTCCTTTTTTAATTTATTTTAATGAAATCAGGCAGCCGAGGTAATGAGCAGAAGCGGGGTTAATCTTTCTAAAAATGTTGCTGTTGCTACCGTTGATGAAGCGAAGAAGGCTTTACCAGATACTTATGCAGTCGTAAGAGAGGTATGTTCTGGACATTGGTGGAACTAATTAGTGGAAAAGGAAATGTGTAGGATTCTGGACTAGTATGTTACTTCTGCTTTGTGTTCCAATATGCTATGTTTAGTTCCTTGGACAAAATGCAGTCAAGTAATAACTTAAGGAACCGTTTTCTTCATAAGAAAACAATGGCATCTGATGATCTAGAAATCTATGCATTTTATTTTTTTGAATAAAAAGCGATTTCTTTGATTTTGAAATTACAAAAGATGGTGCTCTGAGGGGAATTACAATTACTAGAGACCTCACAAATTGGAGAAGAGAGAGGAATCTATTTTGAATTGTACGGTAACATGATTAGTATGTATCTTTCTTCAATATCATTTTCAATATGGAGAACGTTTCATTTTACTGTAGGTGCTTTTTGGGAGTAATGTATGTAATTTTTTTTCCTGTTGGACAGTGTTTGACCAACTCAACTACTCTTGGAATTTGAATTTTAGAATGAAATTGAGAAAGTTTGAAAAAGAAAATTTGGACATAGTTCAACCGGCATGAAGTAGTGTCTATGATCAAGAGTTCATGGGTTGGGTTTGATTTCCCCCACCTTAAATTTTGTACTAAATAAAGGAAGTTCGAAAAAAAGGGCTTGTAAATCCTGTTTTTGTCAACCCACTACAGCTCTTTCTCTTCCTAAGATGCTTGTAAAACCTCTCTGGAAAGATAGATATCCTAGAAATAAAACGGGCATGGTTACCCCAGGTATAGTGTAGCGAAGCTCTGATTTCCCGGTTTCCAATATATATATATATATATATATTCTAAAAACCAAACCAATAAGGGAAGGTGTTTCTTATCTTTCAAAATAGAAAAATGCAAGGTTTTCTTGTGGACAGCTTTTCCTGGAGCTTTGTCTACAAATGAGATCATACACAGTATAAATATTCACAAGTTTTGAGTCCAACGCCATAGAAGTTATCTTGTTGGGAGGGTTGATGAGAGAGGAATAGGAGAAGGGTTCATAGCATTTGGGATATGAACCAAATTTTGTTATCAATCCCAGAGTAGCATCTCTTTGGAAGCTCGCTCCCCTACTATTTGTTTATTGAAAAATGAAAAAACCACTTTCATCCAAACATTTTTGAAAAAAATATGAGAAATAAGTGTTCAACTATTTAAGATAGAAGTAGGTTTTGCTCAAAGAGCTCTCTGTCTAATTATGATATAGCATTAATTGCCAAGATTCTTAGCGAATGTAGAAGAGTTTCTAATTTGGGATTTCTTATTGAGAGGTTTAATTGGTGCAGCTTCTTGGTCCACTGAAGTCTGGCATTGCCAAACGTTCTGCTGGGTACATGTGTGATATACCGAAGGTGCAACAACTCTTCTATGGAGTAGTTTGATTTTTAACTGTTTTTTTCTTTTAGAACTTCATTGAATATCTTATTTCGTTATTTGTTGACTTTGCAGGTTGCAGTTGGAGCTAATGGTTGGTTTTATTTGCATTTATATTTCTTGAACTTGGTTATTCTGCCTTCTTTTTTTTTTTTTTTTTGAGGTGGGAGAAGTGAGTTTGCAAAATGACATGTTTTTTACTTATGTAACCTGCTTAAAGTTTTCTTTGAGAGATCGACTATTTACTTAGTTTAAGTTTACACTGTATGCATGGACTTGACACATCTGATCTGATTACTTTCATATCTGGTATTATACAATTCTGGTTCATATAGGGCAATGAAAACTGACGGATTTTTAAGGAAATTTGTAAGTGCCCAATTATGGTTAGGTTCTTGTGGTTTAACATGTGAAAAATGAGTTTCTAGGGGCTTTATGATGAGAGAAATTAATCGAATATTCTGTCATCAGTCCCTCTCTCTCAGGGTGGGTGTTAACCCTTCCATGTTTTGTGTGTGTGTGTGTAGGCATGACTGTTTTATCTAGACGGCAGGGTGCAATATCTTTCACCAGTAGTTTTGATAGAAATGCTGGGGTGCCGAGCTTCGCTAGATTTATGTCATCAAAATCTTCCAAGCAACCTGGACAAACCTCATCCGAGGTTTGTGTTCAGTTTGAGTTTCTTTAACATTTACTGAATTTTAGTAGAACTGTAGAAGGCACTAGGAAGATTGTTTTTTTTTTTTGAGACAACACTGGGAAGATGTGTTTGTGACTCAGGTTTATGCATCTTCAAATAATCATGAAGATAATAACTAGCTGTTCTTAACCTCCTTGTCAACTGAGACAAAAATGATCATCTCTAATAAATCTTAATCCTAATAAAGCAACGACATGGAGATAGTTAGAATATCAACATATTAGTAAGTAAAATTTAAGTTAGCTTGTAGACAATTTATTTCTAAGGTTGAATGCAATAATGATATAATATATTACTAAGAAGTGAGCTTCCATTAAAAGAGTGTAAAAAACAAGAGGGCTACCATAAGGAGGCAACACCGTAAAAAAAAAAGACTAATGCAAGACAGAATAATTGTTTAGTTTCTTTTTATCCGAATAATTGCATGTTATCAAAATTTACTTTTACTAGAAATCTCATGGTCACGAGTTTAAGCCCGGAAATCGGTATTTTTCTCTCATATTATTTGAGAGTACTAGTTCCCTCCCTCTTTGTAGGATTTGTTGGTCCCCTCCCCCCAATTTGTACTAAAAAAAAACCATTTAAATGTTGGGGTAAAAAATTAAAACTGACTTAACTTAGCATTGCACGATAGCATTTTTATTTTCTTGTGTGTGTTCTCATTTATTTTTGTTGGCCTGATGAGGACCCTGCTTTCTTTTGATCACCAATGAGTTCATTAACTTGGTTTTTCCCTTGATCTTAATATCAGAGCAAAAAAGCAATATCAACTGTGGAAGATCCATTTGATGCTCCCACCTATAATATACCAGAGAAGCCGGTTACATTTGCAGAGGGAGCTTCCTACAGTTTTATCATCCTTGCAGGGCTTGGAGTTGCAGCGGCTGCTGGATATGCCGTTTTCAAGGAGCTCATATTTCAACCTAAAGAGTAAAGAATCAACTTACAGTAGATGAACATTTTGAAGTCTTGCTTAGATTCATGACTTGAAATTGCCTTGTGATTTTCTCAAATTAGTCACTGATATGGGAGTTCTTTTTCTTAGGTATAAGATCTTTGACAAGGCTCTTAAAAGGATTCAAGATGACGGCCAGGTTAGTGAAATAACTTTCGTTTCTTATTAACATCCATATATTCGTTGGGATTAAAAAGAAAATGAAGAAACATGGGCATACAAAGAGAGCTCACAAAAGAAGGAAGCCTACAAGAATGGTTTTCAATCCAATAAGAATTGAGTCAATTGACCTCATATCTTTGCATGACTGATGTACAACTGCCTTTTATGTTCGATCAATTCTCGTAAGATGTACAACTGCATCCCTACAGGCTGAACAATGCCAATATCATGCATCCTATGAGATTACCCTATTGTTCAGCATCTTACAAACTTGAAGAAATGATAAAATATGATTTATTTTATACCGATGCAGAAGCATAATGCGTGCGTTTTAGTTCAGTGTTTAGTTGCATCTCCAATTCCTTGAAAAGGCATGACTGATGTTATTTCACTAATTATGAAAACGTGTGTCGGGTTGTCTTGTGACTTGTGAGAATAGTTGAGGTGGTGTAAGCGGACCTGCTCATGGATATTAAAAATGTGAGCTGGGTTAATTGGAAAATTAATAGGCACAGAGGGGGTGCCAGGTGGCCAATGTGAATTCTTATCATCTTATGTATGATATTTTTGTGTTTAAATTCAAACTACTTTTGTGTTTAAATTCCCCCTTTTAAATTAAATTTCTGTTTTTTCTTTTCTTTTAATAAAATTTAACCTTTTCAAGTTTACTGACAATTAGTTTACAGTGTTCAAGCTATCCTCTGACCTTCTATGTTTTATTAAATTGGTTTTGCTTGCTATCCTTTCAGGTTAGGGTAAGAATCGGTTCCCCTATTACTGGTTATGGGCAAGAAACTAAAAATCGGGCTGCTCGTCAACGTATCAGTAATAGAGTATGGACTGATGAAGACGGTGTAGAACGAGTACAGGTACTTCATTTCTTATGTTGTGATAAAGTTTTCCCTAACGATAATTTGTTTCTCAAGAGGTGTTCCCAAACAATCCCAGTCCCCTTCCATTGAAAGTTAAAAAAATATGGTATAGAGCTCATTTTCATTATATCTTGCGAACTTATATTCTCAGGTGAAGTTTCATATTCGTGGACCCCATGGAGCTGGGGAAGTTTTTACTGAAATGTTCAAAGATCAATCAGACAACCAGTGGAAGTACACGTATTTGATCGTCCAGGTGAAATTGCCTTCTCCCGCCCAATTGCTCTTAGAATCTTATGTGCCTGTGCCTACCTGACATTTCAGCCATCAATCCTGCTCAAGATTTTGTACTGAATTATAACATTGTTCAGAATTACCATCTCATGTTTATAAAATTCTTCCTTTGCCCCACTTATATGTTCGATACGGTTAGAGGCCAATTTTTTTCGAGTTCGATATTTCTGATTACCTCCCAAGTACACTCATTCAACTTGCTTCCACTTGATAGAAGTGAGTCAGAAAGTTTTGCCTTTGTCTTTGTTTTCTGGCAACTCATTATTGATTCTCTCTTGCTGTTAGAGTCTACCCTACATGACCTGGCACAGATTTATTCTTTCCTTGTTATGTTTGTGTACTTCTTTGTCCAAAGTTCTAGATTTTCTCATGTGAGGCTCTTGCCAAGTGATAGAGCAACAACAGAGAATCAACTGGAGATTGATTGAAGGTATGAAGTATATTTATTTGTTGCTTGATTACCTCTTTGATTTTGTTTGCAACAACAAAGGTTAATATGGTCCATTTGGCCCCTTACTTTCATGATTTTTTTGCTTGAACATGTCATAGACAACAATAAAGACTTTTGCTAATAAATGGAGGGGCTGATGTTATTCAATATATTAAGGGTGAGAAGTCTTGAGCTGTGTTTTGTTTGTTTTGGCCTGATAATTATTCTATTTATTGTTCAAGTGCATCAAGATTGCAAATTTAAC

mRNA sequence

TACCGAAACACCCTCCACGAATAAAGGGCTTTATGGGGGGGTTTAACGCCTCTCCTCTAGGGTTTCTCTGTAAACATTTTTTTGTTCATCACATCTGAAAATCAATGGCGAACGGATTGATGAAGCTCGCCACGTTCGTCTCTCGTTCTCGCCTCGGTGCTCAACAATATCTTCAGGCAGCCGAGGTAATGAGCAGAAGCGGGGTTAATCTTTCTAAAAATGTTGCTGTTGCTACCGTTGATGAAGCGAAGAAGGCTTTACCAGATACTTATGCAGTCGTAAGAGAGCTTCTTGGTCCACTGAAGTCTGGCATTGCCAAACGTTCTGCTGGGTACATGTGTGATATACCGAAGGTTGCAGTTGGAGCTAATGGCATGACTGTTTTATCTAGACGGCAGGGTGCAATATCTTTCACCAGTAGTTTTGATAGAAATGCTGGGGTGCCGAGCTTCGCTAGATTTATGTCATCAAAATCTTCCAAGCAACCTGGACAAACCTCATCCGAGAGCAAAAAAGCAATATCAACTGTGGAAGATCCATTTGATGCTCCCACCTATAATATACCAGAGAAGCCGGTTACATTTGCAGAGGGAGCTTCCTACAGTTTTATCATCCTTGCAGGGCTTGGAGTTGCAGCGGCTGCTGGATATGCCGTTTTCAAGGAGCTCATATTTCAACCTAAAGAGTATAAGATCTTTGACAAGGCTCTTAAAAGGATTCAAGATGACGGCCAGGTTAGGGTAAGAATCGGTTCCCCTATTACTGGTTATGGGCAAGAAACTAAAAATCGGGCTGCTCGTCAACGTATCAGTAATAGAGTATGGACTGATGAAGACGGTGTAGAACGAGTACAGGTGAAGTTTCATATTCGTGGACCCCATGGAGCTGGGGAAGTTTTTACTGAAATGTTCAAAGATCAATCAGACAACCAGTGGAAGTACACGTATTTGATCGTCCAGGTGAAATTGCCTTCTCCCGCCCAATTGCTCTTAGAATCTTATGTGCCTGTGCCTACCTGACATTTCAGCCATCAATCCTGCTCAAGATTTTGTACTGAATTATAACATTGTTCAGAATTACCATCTCATGTTTATAAAATTCTTCCTTTGCCCCACTTATATGTTCGATACGGTTAGAGGCCAATTTTTTTCGAGTTCGATATTTCTGATTACCTCCCAAGTACACTCATTCAACTTGCTTCCACTTGATAGAAGTGAGTCAGAAAGTTTTGCCTTTGTCTTTGTTTTCTGGCAACTCATTATTGATTCTCTCTTGCTGTTAGAGTCTACCCTACATGACCTGGCACAGATTTATTCTTTCCTTGTTATGTTTGTGTACTTCTTTGTCCAAAGTTCTAGATTTTCTCATGTGAGGCTCTTGCCAAGTGATAGAGCAACAACAGAGAATCAACTGGAGATTGATTGAAGGTATGAAGTATATTTATTTGTTGCTTGATTACCTCTTTGATTTTGTTTGCAACAACAAAGGTTAATATGGTCCATTTGGCCCCTTACTTTCATGATTTTTTTGCTTGAACATGTCATAGACAACAATAAAGACTTTTGCTAATAAATGGAGGGGCTGATGTTATTCAATATATTAAGGGTGAGAAGTCTTGAGCTGTGTTTTGTTTGTTTTGGCCTGATAATTATTCTATTTATTGTTCAAGTGCATCAAGATTGCAAATTTAAC

Coding sequence (CDS)

ATGGCGAACGGATTGATGAAGCTCGCCACGTTCGTCTCTCGTTCTCGCCTCGGTGCTCAACAATATCTTCAGGCAGCCGAGGTAATGAGCAGAAGCGGGGTTAATCTTTCTAAAAATGTTGCTGTTGCTACCGTTGATGAAGCGAAGAAGGCTTTACCAGATACTTATGCAGTCGTAAGAGAGCTTCTTGGTCCACTGAAGTCTGGCATTGCCAAACGTTCTGCTGGGTACATGTGTGATATACCGAAGGTTGCAGTTGGAGCTAATGGCATGACTGTTTTATCTAGACGGCAGGGTGCAATATCTTTCACCAGTAGTTTTGATAGAAATGCTGGGGTGCCGAGCTTCGCTAGATTTATGTCATCAAAATCTTCCAAGCAACCTGGACAAACCTCATCCGAGAGCAAAAAAGCAATATCAACTGTGGAAGATCCATTTGATGCTCCCACCTATAATATACCAGAGAAGCCGGTTACATTTGCAGAGGGAGCTTCCTACAGTTTTATCATCCTTGCAGGGCTTGGAGTTGCAGCGGCTGCTGGATATGCCGTTTTCAAGGAGCTCATATTTCAACCTAAAGAGTATAAGATCTTTGACAAGGCTCTTAAAAGGATTCAAGATGACGGCCAGGTTAGGGTAAGAATCGGTTCCCCTATTACTGGTTATGGGCAAGAAACTAAAAATCGGGCTGCTCGTCAACGTATCAGTAATAGAGTATGGACTGATGAAGACGGTGTAGAACGAGTACAGGTGAAGTTTCATATTCGTGGACCCCATGGAGCTGGGGAAGTTTTTACTGAAATGTTCAAAGATCAATCAGACAACCAGTGGAAGTACACGTATTTGATCGTCCAGGTGAAATTGCCTTCTCCCGCCCAATTGCTCTTAGAATCTTATGTGCCTGTGCCTACCTGA

Protein sequence

MANGLMKLATFVSRSRLGAQQYLQAAEVMSRSGVNLSKNVAVATVDEAKKALPDTYAVVRELLGPLKSGIAKRSAGYMCDIPKVAVGANGMTVLSRRQGAISFTSSFDRNAGVPSFARFMSSKSSKQPGQTSSESKKAISTVEDPFDAPTYNIPEKPVTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIFDKALKRIQDDGQVRVRIGSPITGYGQETKNRAARQRISNRVWTDEDGVERVQVKFHIRGPHGAGEVFTEMFKDQSDNQWKYTYLIVQVKLPSPAQLLLESYVPVPT

Homology

[Close]

BLAST of Sed0026275 vs. NCBI nr
Match: KAG6602238.1 (putative mitochondrial import inner membrane translocase subunit TIM21, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 472.2 bits (1214), Expect = 3.3e-129
Identity = 248/324 (76.54%), Postives = 273/324 (84.26%), Query Frame = 0


Query: 1   MANGLMKLATFVSR--------------SRLGAQQYLQAAEVMSRSGVNLSKNVAVATVD 60
           MANGLMKL TFVSR              SRLGA +Y +AAEV+ RSG+N+SK VAV T+D
Sbjct: 1   MANGLMKLTTFVSRSSIVPRHWHQSSSFSRLGAHEYFKAAEVIGRSGMNISKGVAVPTID 60

Query: 61  EAKKALPDTYAVVRELLGPLKSGIAKRSAGYMCDIPKVAVGANGMTVLSRRQGA------ 120
            AK+ALPDTY  VRELLGPLKSG+AK+SAGY+CDIPK  +GA GM VLSRRQGA      
Sbjct: 61  GAKRALPDTYVTVRELLGPLKSGVAKQSAGYVCDIPKDTLGATGMAVLSRRQGARGSIVK 120

Query: 121 ---ISFTSSFDRNAGVPSFARFMSSKSSKQPGQTSSESKKAISTVEDPFDAPTYNIPEKP 180
              ++   S D NAGVP FARFMSSKSS+Q GQT+SE KK ISTVEDPFDAPTYNIPEKP
Sbjct: 121 LSPLAVARSCDTNAGVPCFARFMSSKSSEQRGQTASERKKEISTVEDPFDAPTYNIPEKP 180

Query: 181 VTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIFDKALKRIQDDGQVRVRIGS 240
           VTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIF KALKRIQDD QVRVRIGS
Sbjct: 181 VTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIFGKALKRIQDDSQVRVRIGS 240

Query: 241 PITGYGQETKNRAARQRISNRVWTDEDGVERVQVKFHIRGPHGAGEVFTEMFKDQSDNQW 300
           PITGYGQET+NRAARQRI NRVWTDEDGVERV+V F+IRGPHGAG+V+TEMFKDQ+D QW
Sbjct: 241 PITGYGQETRNRAARQRIPNRVWTDEDGVERVEVNFYIRGPHGAGKVYTEMFKDQADKQW 300

Query: 301 KYTYLIVQVKLPSPAQLLLESYVP 302
           K+TYLIV+VK PSPAQL+LESY+P
Sbjct: 301 KFTYLIVEVKSPSPAQLILESYMP 324

[Close]

BLAST of Sed0026275 vs. NCBI nr
Match: XP_022990405.1 (probable mitochondrial import inner membrane translocase subunit TIM21 [Cucurbita maxima] >XP_022990406.1 probable mitochondrial import inner membrane translocase subunit TIM21 [Cucurbita maxima])

HSP 1 Score: 470.3 bits (1209), Expect = 1.2e-128
Identity = 249/324 (76.85%), Postives = 273/324 (84.26%), Query Frame = 0


Query: 1   MANGLMKLATFVSR--------------SRLGAQQYLQAAEVMSRSGVNLSKNVAVATVD 60
           MANGLMKL TFVSR              SRL A +YL+AAEV+SRSG+N+SK VAV T+D
Sbjct: 1   MANGLMKLTTFVSRSFIVPRQWHQSSSFSRLVAHEYLKAAEVISRSGMNISKGVAVPTID 60

Query: 61  EAKKALPDTYAVVRELLGPLKSGIAKRSAGYMCDIPKVAVGANGMTVLSRRQGA------ 120
            AK+ALPDTY  VRELLGPLKSG+AKRSAGY+C+IPK  +GA GM VLSRRQGA      
Sbjct: 61  RAKRALPDTYVTVRELLGPLKSGVAKRSAGYVCNIPKDTLGATGMAVLSRRQGARGSIVN 120

Query: 121 ---ISFTSSFDRNAGVPSFARFMSSKSSKQPGQTSSESKKAISTVEDPFDAPTYNIPEKP 180
              ++ TS  D NAGV  FARFMSSKSS+Q GQT SE KK ISTVEDPFDAPTYNIPEKP
Sbjct: 121 LSPLAVTSRCDTNAGVACFARFMSSKSSEQRGQTPSERKKEISTVEDPFDAPTYNIPEKP 180

Query: 181 VTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIFDKALKRIQDDGQVRVRIGS 240
           VTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIF KALKRIQDD QVRVRIGS
Sbjct: 181 VTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIFGKALKRIQDDSQVRVRIGS 240

Query: 241 PITGYGQETKNRAARQRISNRVWTDEDGVERVQVKFHIRGPHGAGEVFTEMFKDQSDNQW 300
           PITGYGQET+NRAARQRI NRVWTDEDGVERV+V F+IRGPHGAG+V+TEMFKDQ+D QW
Sbjct: 241 PITGYGQETRNRAARQRIPNRVWTDEDGVERVEVNFYIRGPHGAGKVYTEMFKDQADKQW 300

Query: 301 KYTYLIVQVKLPSPAQLLLESYVP 302
           K+TYLIV+VK PSPAQL+LESY+P
Sbjct: 301 KFTYLIVEVKSPSPAQLILESYMP 324

[Close]

BLAST of Sed0026275 vs. NCBI nr
Match: XP_022957810.1 (probable mitochondrial import inner membrane translocase subunit TIM21 [Cucurbita moschata])

HSP 1 Score: 470.3 bits (1209), Expect = 1.2e-128
Identity = 247/324 (76.23%), Postives = 273/324 (84.26%), Query Frame = 0


Query: 1   MANGLMKLATFVSR--------------SRLGAQQYLQAAEVMSRSGVNLSKNVAVATVD 60
           MANGLMKL TFVSR              SRLGA +Y + AEV+SRSG+++SK VAV T+D
Sbjct: 1   MANGLMKLTTFVSRSSIVPRHWHQSSSFSRLGAHEYFKGAEVISRSGMDISKGVAVPTID 60

Query: 61  EAKKALPDTYAVVRELLGPLKSGIAKRSAGYMCDIPKVAVGANGMTVLSRRQGA------ 120
            AK+ALPDTY  VRELLGPLKSG+AK+SAGY+CDIPK  +GA GM VLSRRQGA      
Sbjct: 61  GAKRALPDTYVTVRELLGPLKSGVAKQSAGYVCDIPKDTLGATGMAVLSRRQGARGSIVK 120

Query: 121 ---ISFTSSFDRNAGVPSFARFMSSKSSKQPGQTSSESKKAISTVEDPFDAPTYNIPEKP 180
              ++   S D NAGVP FARFMSSKSS+Q GQT+SE KK ISTVEDPFDAPTYNIPEKP
Sbjct: 121 LSPLAVARSCDTNAGVPCFARFMSSKSSEQRGQTASERKKEISTVEDPFDAPTYNIPEKP 180

Query: 181 VTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIFDKALKRIQDDGQVRVRIGS 240
           VTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIF KALKRIQDD QVRVRIGS
Sbjct: 181 VTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIFGKALKRIQDDSQVRVRIGS 240

Query: 241 PITGYGQETKNRAARQRISNRVWTDEDGVERVQVKFHIRGPHGAGEVFTEMFKDQSDNQW 300
           PITGYGQET+NRAARQRI NRVWTDEDGVERV+V F+IRGPHGAG+V+TEMFKDQ+D QW
Sbjct: 241 PITGYGQETRNRAARQRIPNRVWTDEDGVERVEVNFYIRGPHGAGKVYTEMFKDQADKQW 300

Query: 301 KYTYLIVQVKLPSPAQLLLESYVP 302
           K+TYLIV+VK PSPAQL+LESY+P
Sbjct: 301 KFTYLIVEVKSPSPAQLILESYMP 324

[Close]

BLAST of Sed0026275 vs. NCBI nr
Match: XP_023518904.1 (probable mitochondrial import inner membrane translocase subunit TIM21 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 468.4 bits (1204), Expect = 4.7e-128
Identity = 248/324 (76.54%), Postives = 273/324 (84.26%), Query Frame = 0


Query: 1   MANGLMKLATFVSR--------------SRLGAQQYLQAAEVMSRSGVNLSKNVAVATVD 60
           MANGLMKL T VSR              SRLGA +YL+AAEV+SRSG+N+SK VAV T+D
Sbjct: 1   MANGLMKLTTIVSRSSIVLRQWHQSSSFSRLGAHEYLKAAEVISRSGMNISKGVAVPTID 60

Query: 61  EAKKALPDTYAVVRELLGPLKSGIAKRSAGYMCDIPKVAVGANGMTVLSRRQGA------ 120
            AK+ALPDTY  VRELLGPLKSG+AKRSAGY+ DIPK  +GA G+ VLSRRQGA      
Sbjct: 61  GAKRALPDTYVTVRELLGPLKSGVAKRSAGYVRDIPKDTLGATGIAVLSRRQGARGSIVK 120

Query: 121 ---ISFTSSFDRNAGVPSFARFMSSKSSKQPGQTSSESKKAISTVEDPFDAPTYNIPEKP 180
              ++   S D NAGVP FARFMSSKSS+Q GQT+SE KK ISTVEDPFDAPTYNIPEKP
Sbjct: 121 LSPLAVARSCDTNAGVPCFARFMSSKSSEQRGQTASERKKEISTVEDPFDAPTYNIPEKP 180

Query: 181 VTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIFDKALKRIQDDGQVRVRIGS 240
           VTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIF KALKRIQDD QVRVRIGS
Sbjct: 181 VTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIFGKALKRIQDDSQVRVRIGS 240

Query: 241 PITGYGQETKNRAARQRISNRVWTDEDGVERVQVKFHIRGPHGAGEVFTEMFKDQSDNQW 300
           PITGYGQET+NRAARQRI NRVWTDEDGVERV+V F+IRGPHGAG+V+TEMFKDQ+D QW
Sbjct: 241 PITGYGQETRNRAARQRIPNRVWTDEDGVERVEVNFYIRGPHGAGKVYTEMFKDQADKQW 300

Query: 301 KYTYLIVQVKLPSPAQLLLESYVP 302
           K+TYLIV+VK PSPAQL+LESY+P
Sbjct: 301 KFTYLIVEVKSPSPAQLILESYMP 324

[Close]

BLAST of Sed0026275 vs. NCBI nr
Match: XP_038884080.1 (probable mitochondrial import inner membrane translocase subunit TIM21 [Benincasa hispida])

HSP 1 Score: 455.3 bits (1170), Expect = 4.1e-124
Identity = 248/324 (76.54%), Postives = 269/324 (83.02%), Query Frame = 0


Query: 1   MANGLMKLATFVSR--------------SRLGAQQYLQAAEVMSRSGVNLSKNVAVATVD 60
           MANGLMKL  FVSR              SRLGAQ+YLQ AEVMSRSG+N+SK VAV T D
Sbjct: 1   MANGLMKLTRFVSRSSLLLRQCHQPSSFSRLGAQEYLQTAEVMSRSGMNVSKRVAVTTFD 60

Query: 61  EAKKALPDTYAVVRELLGPLKSGIAKRSAGYMCDIPKVAVGANGMTVLSRRQGA------ 120
           EAK+AL DTYAV  ELLGPLKSGI+KRSA  +CDIPK A+GANGM VLSR Q A      
Sbjct: 61  EAKRALSDTYAVT-ELLGPLKSGISKRSAVNVCDIPKAALGANGMAVLSRWQDARASVVT 120

Query: 121 ---ISFTSSFDRNAGVPSFARFMSSKSSKQPGQTSSESKKAISTVEDPFDAPTYNIPEKP 180
              +  TS  D +A  P FARFMSSKSS++  QT+SESKK ISTVEDPFDAPTYNIPEKP
Sbjct: 121 SSTLGITSRCDTSARGPCFARFMSSKSSEKREQTASESKKEISTVEDPFDAPTYNIPEKP 180

Query: 181 VTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIFDKALKRIQDDGQVRVRIGS 240
           VTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIFDKALKRIQDD QVRVRIGS
Sbjct: 181 VTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIFDKALKRIQDDSQVRVRIGS 240

Query: 241 PITGYGQETKNRAARQRISNRVWTDEDGVERVQVKFHIRGPHGAGEVFTEMFKDQSDNQW 300
           PITGYGQET+NRAARQRI NRVWTDEDGVERV+V F+IRGPHGAG+V+TEMFKDQ D QW
Sbjct: 241 PITGYGQETRNRAARQRIPNRVWTDEDGVERVEVNFYIRGPHGAGKVYTEMFKDQVDKQW 300

Query: 301 KYTYLIVQVKLPSPAQLLLESYVP 302
           K+TYLIV+VK PSPAQL+LESY+P
Sbjct: 301 KFTYLIVEVKSPSPAQLILESYMP 323

[Close]

BLAST of Sed0026275 vs. ExPASy Swiss-Prot
Match: Q1G3L1 (Probable mitochondrial import inner membrane translocase subunit TIM21 OS=Arabidopsis thaliana OX=3702 GN=TIM21 PE=1 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 3.5e-81
Identity = 158/268 (58.96%), Postives = 199/268 (74.25%), Query Frame = 0


Query: 34  VNLSKNVAVATVDEAKKALPDTYAVVRELLGPLKSGIAKRSAGYMCDIPKVAVGANGMTV 93
           +NL +  A+A   ++K  L    +  +   G  KS     S  +   + K + GANG+  
Sbjct: 4   MNLLRRSAIAIGRQSKSKLASFSSATQPCSGIPKSSKRVFSNSF---LSKDSTGANGLLF 63

Query: 94  LSRRQGAISFTSSFDRNAGVPSFARFMSSKSSKQPGQTSSESKKAISTVEDPFDAPTYNI 153
             R   A   T +  +N     F R  +S++SK+PG   +++KK ++TVEDPFD+PTY+I
Sbjct: 64  RFRNPQASICTEARPKNINSSYFTRSFASRTSKEPGNQQNKAKKEVTTVEDPFDSPTYHI 123

Query: 154 PEKPVTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIFDKALKRIQDDGQVRV 213
           PEKPVTF EGASYS +ILAGLGVA AAGY VFKELIFQPKEYK+FDKALKRIQDDGQVRV
Sbjct: 124 PEKPVTFTEGASYSLVILAGLGVAGAAGYGVFKELIFQPKEYKVFDKALKRIQDDGQVRV 183

Query: 214 RIGSPITGYGQETKNRAARQRISNRVWTDEDGVERVQVKFHIRGPHGAGEVFTEMFKDQS 273
           RIGSPI GYGQET+NRAARQRI NRV+TDEDGVE V+V F+IRGP GAG+V+TEMFKD++
Sbjct: 184 RIGSPIKGYGQETRNRAARQRIPNRVFTDEDGVEHVEVNFYIRGPQGAGKVYTEMFKDKA 243

Query: 274 DNQWKYTYLIVQVKLPSPAQLLLESYVP 302
           + +WKYTYLIV++  PSPA+L+LESY+P
Sbjct: 244 EKEWKYTYLIVEILTPSPAKLMLESYLP 268

[Close]

BLAST of Sed0026275 vs. ExPASy Swiss-Prot
Match: Q7S8S5 (Mitochondrial import inner membrane translocase subunit tim21 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=tim21 PE=3 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.8e-05
Identity = 55/215 (25.58%), Postives = 102/215 (47.44%), Query Frame = 0


Query: 96  RRQGAISFTSSFDRNAGVPSFARFMSSKSSKQPGQTSSESKKAISTVEDPFDAPTYNIPE 155
           R+Q  I+  +S      +P  A  +   SS++   T+ ES K  S    PF+   + +P 
Sbjct: 22  RQQATITTAAS----RALPPTAASVILVSSRRQYATTQESSKRRSVT--PFNDDGH-VPW 81

Query: 156 KPVTFAEGA------SYSF-IILAGLGVAAAAGYAVFKELIFQPKEYKIFDKALKRIQDD 215
             ++  E A      +++F +++ G+ +     Y +F ++     +   F++A+ RI+ D
Sbjct: 82  TRLSTGEKAGRAVQQTFNFGLVILGVVLTGGIAYLLFTDVFSPESKTAYFNRAVDRIRAD 141

Query: 216 GQVRVRI--GSP--ITGYGQETKNRAARQR-ISNRVWTDEDGVERVQVKFHIRGPHGAGE 275
            +    +  G P  I  +G+ET N+  R R I+  V  D  GVE +++ FH+ GP G+G 
Sbjct: 142 PRCVALLSPGDPKKIAAHGEETHNKWRRARPIAATVEKDNRGVEHLKMHFHVEGPRGSGV 201

Query: 276 VFTEMFKDQSDNQWKYTYLIVQVKLPSPAQLLLES 299
           V   + K      W++ Y    V +    ++ LE+
Sbjct: 202 VGLHLTK--QPGHWEHEYQTFYVDVRGHQRIYLEN 227

[Close]

BLAST of Sed0026275 vs. ExPASy Swiss-Prot
Match: Q6CAQ9 (Mitochondrial import inner membrane translocase subunit TIM21 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=TIM21 PE=3 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 9.9e-04
Identity = 33/127 (25.98%), Postives = 60/127 (47.24%), Query Frame = 0


Query: 166 YSFIILAGLGVAAAAGYAVFKELIFQPKEYKIFDKALKRIQDDGQVRVRIGSPITGYGQE 225
           Y  IILA LG+     Y +  EL+    + +IF++A K I+ +  V   +G  ++  G+ 
Sbjct: 109 YLGIILAALGLFGLVWYYLIMELVMPSGDVRIFNRAFKEIEKNEDVMRVLGGQLSSMGEG 168

Query: 226 TKNRAARQR--ISNRVWTDEDGVERVQVKFHIRGPHGAGEVFTEMFKDQ----SDNQWKY 285
              R  R +  +S R   D+ G E + + F++ G    G    E+ ++     S  ++ Y
Sbjct: 169 GGGRWGRNQPPVSKR-GIDKYGREHIWMNFYVSGDINEGRAKLELVQNTDSKLSSERFVY 228

Query: 286 TYLIVQV 287
            Y +V +
Sbjct: 229 RYFVVDI 234

[Close]

BLAST of Sed0026275 vs. ExPASy TrEMBL
Match: A0A6J1JQ07 (Mitochondrial import inner membrane translocase subunit Tim21 OS=Cucurbita maxima OX=3661 GN=LOC111487273 PE=3 SV=1)

HSP 1 Score: 470.3 bits (1209), Expect = 6.0e-129
Identity = 249/324 (76.85%), Postives = 273/324 (84.26%), Query Frame = 0


Query: 1   MANGLMKLATFVSR--------------SRLGAQQYLQAAEVMSRSGVNLSKNVAVATVD 60
           MANGLMKL TFVSR              SRL A +YL+AAEV+SRSG+N+SK VAV T+D
Sbjct: 1   MANGLMKLTTFVSRSFIVPRQWHQSSSFSRLVAHEYLKAAEVISRSGMNISKGVAVPTID 60

Query: 61  EAKKALPDTYAVVRELLGPLKSGIAKRSAGYMCDIPKVAVGANGMTVLSRRQGA------ 120
            AK+ALPDTY  VRELLGPLKSG+AKRSAGY+C+IPK  +GA GM VLSRRQGA      
Sbjct: 61  RAKRALPDTYVTVRELLGPLKSGVAKRSAGYVCNIPKDTLGATGMAVLSRRQGARGSIVN 120

Query: 121 ---ISFTSSFDRNAGVPSFARFMSSKSSKQPGQTSSESKKAISTVEDPFDAPTYNIPEKP 180
              ++ TS  D NAGV  FARFMSSKSS+Q GQT SE KK ISTVEDPFDAPTYNIPEKP
Sbjct: 121 LSPLAVTSRCDTNAGVACFARFMSSKSSEQRGQTPSERKKEISTVEDPFDAPTYNIPEKP 180

Query: 181 VTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIFDKALKRIQDDGQVRVRIGS 240
           VTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIF KALKRIQDD QVRVRIGS
Sbjct: 181 VTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIFGKALKRIQDDSQVRVRIGS 240

Query: 241 PITGYGQETKNRAARQRISNRVWTDEDGVERVQVKFHIRGPHGAGEVFTEMFKDQSDNQW 300
           PITGYGQET+NRAARQRI NRVWTDEDGVERV+V F+IRGPHGAG+V+TEMFKDQ+D QW
Sbjct: 241 PITGYGQETRNRAARQRIPNRVWTDEDGVERVEVNFYIRGPHGAGKVYTEMFKDQADKQW 300

Query: 301 KYTYLIVQVKLPSPAQLLLESYVP 302
           K+TYLIV+VK PSPAQL+LESY+P
Sbjct: 301 KFTYLIVEVKSPSPAQLILESYMP 324

[Close]

BLAST of Sed0026275 vs. ExPASy TrEMBL
Match: A0A6J1H1K0 (Mitochondrial import inner membrane translocase subunit Tim21 OS=Cucurbita moschata OX=3662 GN=LOC111459238 PE=3 SV=1)

HSP 1 Score: 470.3 bits (1209), Expect = 6.0e-129
Identity = 247/324 (76.23%), Postives = 273/324 (84.26%), Query Frame = 0


Query: 1   MANGLMKLATFVSR--------------SRLGAQQYLQAAEVMSRSGVNLSKNVAVATVD 60
           MANGLMKL TFVSR              SRLGA +Y + AEV+SRSG+++SK VAV T+D
Sbjct: 1   MANGLMKLTTFVSRSSIVPRHWHQSSSFSRLGAHEYFKGAEVISRSGMDISKGVAVPTID 60

Query: 61  EAKKALPDTYAVVRELLGPLKSGIAKRSAGYMCDIPKVAVGANGMTVLSRRQGA------ 120
            AK+ALPDTY  VRELLGPLKSG+AK+SAGY+CDIPK  +GA GM VLSRRQGA      
Sbjct: 61  GAKRALPDTYVTVRELLGPLKSGVAKQSAGYVCDIPKDTLGATGMAVLSRRQGARGSIVK 120

Query: 121 ---ISFTSSFDRNAGVPSFARFMSSKSSKQPGQTSSESKKAISTVEDPFDAPTYNIPEKP 180
              ++   S D NAGVP FARFMSSKSS+Q GQT+SE KK ISTVEDPFDAPTYNIPEKP
Sbjct: 121 LSPLAVARSCDTNAGVPCFARFMSSKSSEQRGQTASERKKEISTVEDPFDAPTYNIPEKP 180

Query: 181 VTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIFDKALKRIQDDGQVRVRIGS 240
           VTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIF KALKRIQDD QVRVRIGS
Sbjct: 181 VTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIFGKALKRIQDDSQVRVRIGS 240

Query: 241 PITGYGQETKNRAARQRISNRVWTDEDGVERVQVKFHIRGPHGAGEVFTEMFKDQSDNQW 300
           PITGYGQET+NRAARQRI NRVWTDEDGVERV+V F+IRGPHGAG+V+TEMFKDQ+D QW
Sbjct: 241 PITGYGQETRNRAARQRIPNRVWTDEDGVERVEVNFYIRGPHGAGKVYTEMFKDQADKQW 300

Query: 301 KYTYLIVQVKLPSPAQLLLESYVP 302
           K+TYLIV+VK PSPAQL+LESY+P
Sbjct: 301 KFTYLIVEVKSPSPAQLILESYMP 324

[Close]

BLAST of Sed0026275 vs. ExPASy TrEMBL
Match: A0A6J1BWA3 (Mitochondrial import inner membrane translocase subunit Tim21 OS=Momordica charantia OX=3673 GN=LOC111006276 PE=3 SV=1)

HSP 1 Score: 441.4 bits (1134), Expect = 3.0e-120
Identity = 235/324 (72.53%), Postives = 261/324 (80.56%), Query Frame = 0


Query: 1   MANGLMKLATFVSR--------------SRLGAQQYLQAAEVMSRSGVNLSKNVAVATVD 60
           MAN   KL  F SR               RL A ++LQAAEV  RSGVN+SK V V T+D
Sbjct: 1   MANRFTKLTKFASRPLLVPRQWHRPSSFHRLDAHEHLQAAEVARRSGVNVSKRVGVPTLD 60

Query: 61  EAKKALPDTYAVVRELLGPLKSGIAKRSAGYMCDIPKVAVGANGMTVLSRRQGAISFTSS 120
           EAK+ALPD +A V+ELLGPLKSG AKRSAGY+CDI K AVGA+G+ VLSR Q A     +
Sbjct: 61  EAKRALPDNFATVKELLGPLKSGFAKRSAGYVCDISKDAVGADGIAVLSRWQDARGSVVN 120

Query: 121 F---------DRNAGVPSFARFMSSKSSKQPGQTSSESKKAISTVEDPFDAPTYNIPEKP 180
                     D+NAGVP F RFMSSK+S+Q GQT SE KK ISTVEDPFDAPTYNIPEKP
Sbjct: 121 LSPLVGIRRCDKNAGVPCFTRFMSSKASEQRGQTPSERKKEISTVEDPFDAPTYNIPEKP 180

Query: 181 VTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIFDKALKRIQDDGQVRVRIGS 240
           VTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIFDKALKRIQDD QVR+RIGS
Sbjct: 181 VTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIFDKALKRIQDDSQVRIRIGS 240

Query: 241 PITGYGQETKNRAARQRISNRVWTDEDGVERVQVKFHIRGPHGAGEVFTEMFKDQSDNQW 300
           PITGYGQE++NRAARQRI NRVWTDEDGVERV++ F+IRGPHGAG+V+TEMFKDQ D QW
Sbjct: 241 PITGYGQESRNRAARQRIPNRVWTDEDGVERVEINFYIRGPHGAGKVYTEMFKDQVDKQW 300

Query: 301 KYTYLIVQVKLPSPAQLLLESYVP 302
           K+TYLIV+VK PSPAQL+LESY+P
Sbjct: 301 KFTYLIVEVKSPSPAQLILESYMP 324

[Close]

BLAST of Sed0026275 vs. ExPASy TrEMBL
Match: A0A1S3C3T0 (Mitochondrial import inner membrane translocase subunit Tim21 OS=Cucumis melo OX=3656 GN=LOC103496532 PE=3 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 1.1e-119
Identity = 236/325 (72.62%), Postives = 261/325 (80.31%), Query Frame = 0


Query: 1   MANGLMKLATFVSR--------------SRLGAQQYLQAAEVMSRSGVNLSKNVAVATVD 60
           MANGL+K   F+S               SRLG+ ++LQ AEVM  SG N SK VAV  +D
Sbjct: 1   MANGLLKFTHFISPSSLLPRQWHHSSTFSRLGSHEFLQTAEVMRSSGTNASKRVAVNIID 60

Query: 61  EAKKALPDTYAV-VRELLGPLKSGIAKRSAGYMCDIPKVAVGANGMTVLSRRQ------- 120
           EAK+ LPDTYA  VRELLGPLK GI+K+SA Y+CDIPK A+G NG+ VLSR Q       
Sbjct: 61  EAKRGLPDTYATSVRELLGPLKFGISKQSAVYVCDIPKAAIGGNGIPVLSRWQNVRASVV 120

Query: 121 --GAISFTSSFDRNAGVPSFARFMSSKSSKQPGQTSSESKKAISTVEDPFDAPTYNIPEK 180
               +  TS  D +A  P FARFMSSKSS++ GQT SESKK ISTVEDPFDAPTYNIPEK
Sbjct: 121 NFSTLGVTSRCDTSARGPCFARFMSSKSSEKRGQTESESKKEISTVEDPFDAPTYNIPEK 180

Query: 181 PVTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIFDKALKRIQDDGQVRVRIG 240
           PVTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIFDKALKRIQDD QVRVRIG
Sbjct: 181 PVTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIFDKALKRIQDDSQVRVRIG 240

Query: 241 SPITGYGQETKNRAARQRISNRVWTDEDGVERVQVKFHIRGPHGAGEVFTEMFKDQSDNQ 300
           SPITGYGQET+NRAARQRI NRVWTDEDGVERV+V F+IRGPHGAG+V+TEMFKDQ D Q
Sbjct: 241 SPITGYGQETRNRAARQRIPNRVWTDEDGVERVEVNFYIRGPHGAGKVYTEMFKDQVDKQ 300

Query: 301 WKYTYLIVQVKLPSPAQLLLESYVP 302
           WK+TYLIV+VK PSPAQL+LESY+P
Sbjct: 301 WKFTYLIVEVKSPSPAQLILESYMP 325

[Close]

BLAST of Sed0026275 vs. ExPASy TrEMBL
Match: A0A0A0K9E8 (Mitochondrial import inner membrane translocase subunit Tim21 OS=Cucumis sativus OX=3659 GN=Csa_6G046410 PE=3 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 1.6e-118
Identity = 238/324 (73.46%), Postives = 261/324 (80.56%), Query Frame = 0


Query: 1   MANGLMKLATFVSR-------------SRLGAQQYLQAAEVMSRSGVNLSKNVAVATVDE 60
           MANGLMKL  F+S              SRLG+ ++LQ AEVM  SG+N SK V V  +DE
Sbjct: 1   MANGLMKLTRFISPSSLLPRQWHHSSFSRLGSHEFLQTAEVMRSSGMNASKRVTVNIIDE 60

Query: 61  AKKALPDTYAV-VRELLGPLKSGIAKRSAGYMCDIPKVAVGANGMTVLSRRQGA------ 120
           AK  LPDTYA  VRELL PLKSGI+K+SA Y+CDIPK A+G  GM VLSR Q A      
Sbjct: 61  AKSGLPDTYATSVRELLAPLKSGISKQSAVYVCDIPKAALG--GMPVLSRWQDARASVVN 120

Query: 121 ---ISFTSSFDRNAGVPSFARFMSSKSSKQPGQTSSESKKAISTVEDPFDAPTYNIPEKP 180
              +  TS  D +A  P FARFMSSKSS++ GQT SESKK ISTVEDPFDAPTYNIPEKP
Sbjct: 121 FSTLGVTSRCDTSARGPCFARFMSSKSSEKRGQTESESKKEISTVEDPFDAPTYNIPEKP 180

Query: 181 VTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIFDKALKRIQDDGQVRVRIGS 240
           VTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIFDKALKRIQDD QVRVRIGS
Sbjct: 181 VTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIFDKALKRIQDDSQVRVRIGS 240

Query: 241 PITGYGQETKNRAARQRISNRVWTDEDGVERVQVKFHIRGPHGAGEVFTEMFKDQSDNQW 300
           PITGYGQET+NRAARQRI NRVWTDEDGVERV+V F+IRGPHGAG+V+TEMFKDQ D QW
Sbjct: 241 PITGYGQETRNRAARQRIPNRVWTDEDGVERVEVNFYIRGPHGAGKVYTEMFKDQVDKQW 300

Query: 301 KYTYLIVQVKLPSPAQLLLESYVP 302
           K+TYLIV+VK PSPAQL+LESY+P
Sbjct: 301 KFTYLIVEVKSPSPAQLILESYMP 322

[Close]

BLAST of Sed0026275 vs. TAIR 10
Match: AT4G00026.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim21 (InterPro:IPR013261); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 303.1 bits (775), Expect = 2.5e-82
Identity = 158/268 (58.96%), Postives = 199/268 (74.25%), Query Frame = 0


Query: 34  VNLSKNVAVATVDEAKKALPDTYAVVRELLGPLKSGIAKRSAGYMCDIPKVAVGANGMTV 93
           +NL +  A+A   ++K  L    +  +   G  KS     S  +   + K + GANG+  
Sbjct: 4   MNLLRRSAIAIGRQSKSKLASFSSATQPCSGIPKSSKRVFSNSF---LSKDSTGANGLLF 63

Query: 94  LSRRQGAISFTSSFDRNAGVPSFARFMSSKSSKQPGQTSSESKKAISTVEDPFDAPTYNI 153
             R   A   T +  +N     F R  +S++SK+PG   +++KK ++TVEDPFD+PTY+I
Sbjct: 64  RFRNPQASICTEARPKNINSSYFTRSFASRTSKEPGNQQNKAKKEVTTVEDPFDSPTYHI 123

Query: 154 PEKPVTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIFDKALKRIQDDGQVRV 213
           PEKPVTF EGASYS +ILAGLGVA AAGY VFKELIFQPKEYK+FDKALKRIQDDGQVRV
Sbjct: 124 PEKPVTFTEGASYSLVILAGLGVAGAAGYGVFKELIFQPKEYKVFDKALKRIQDDGQVRV 183

Query: 214 RIGSPITGYGQETKNRAARQRISNRVWTDEDGVERVQVKFHIRGPHGAGEVFTEMFKDQS 273
           RIGSPI GYGQET+NRAARQRI NRV+TDEDGVE V+V F+IRGP GAG+V+TEMFKD++
Sbjct: 184 RIGSPIKGYGQETRNRAARQRIPNRVFTDEDGVEHVEVNFYIRGPQGAGKVYTEMFKDKA 243

Query: 274 DNQWKYTYLIVQVKLPSPAQLLLESYVP 302
           + +WKYTYLIV++  PSPA+L+LESY+P
Sbjct: 244 EKEWKYTYLIVEILTPSPAKLMLESYLP 268

The following BLAST results are available for this feature:

BLAST of Sed0026275 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6602238.1	3.3e-129	76.54	putative mitochondrial import inner membrane translocase subunit TIM21, partial ...	[more]
XP_022990405.1	1.2e-128	76.85	probable mitochondrial import inner membrane translocase subunit TIM21 [Cucurbit...	[more]
XP_022957810.1	1.2e-128	76.23	probable mitochondrial import inner membrane translocase subunit TIM21 [Cucurbit...	[more]
XP_023518904.1	4.7e-128	76.54	probable mitochondrial import inner membrane translocase subunit TIM21 [Cucurbit...	[more]
XP_038884080.1	4.1e-124	76.54	probable mitochondrial import inner membrane translocase subunit TIM21 [Benincas...	[more]

BLAST of Sed0026275 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1G3L1	3.5e-81	58.96	Probable mitochondrial import inner membrane translocase subunit TIM21 OS=Arabid...	[more]
Q7S8S5	1.8e-05	25.58	Mitochondrial import inner membrane translocase subunit tim21 OS=Neurospora cras...	[more]
Q6CAQ9	9.9e-04	25.98	Mitochondrial import inner membrane translocase subunit TIM21 OS=Yarrowia lipoly...	[more]

BLAST of Sed0026275 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JQ07	6.0e-129	76.85	Mitochondrial import inner membrane translocase subunit Tim21 OS=Cucurbita maxim...	[more]
A0A6J1H1K0	6.0e-129	76.23	Mitochondrial import inner membrane translocase subunit Tim21 OS=Cucurbita mosch...	[more]
A0A6J1BWA3	3.0e-120	72.53	Mitochondrial import inner membrane translocase subunit Tim21 OS=Momordica chara...	[more]
A0A1S3C3T0	1.1e-119	72.62	Mitochondrial import inner membrane translocase subunit Tim21 OS=Cucumis melo OX...	[more]
A0A0A0K9E8	1.6e-118	73.46	Mitochondrial import inner membrane translocase subunit Tim21 OS=Cucumis sativus...	[more]

BLAST of Sed0026275 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G00026.1	2.5e-82	58.96	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038552	Tim21 IMS domain superfamily	GENE3D	3.10.450.320	Mitochondrial import inner membrane translocase subunit Tim21	coord: 103..210 e-value: 1.4E-26 score: 94.7
IPR013261	Mitochondrial import inner membrane translocase subunit Tim21	PFAM	PF08294	TIM21	coord: 72..197 e-value: 2.0E-25 score: 89.4
IPR013261	Mitochondrial import inner membrane translocase subunit Tim21	PANTHER	PTHR13032	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM21	coord: 21..211
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..49
None	No IPR available	PANTHER	PTHR13032:SF7	SUBFAMILY NOT NAMED	coord: 21..211

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0026275.1	Sed0026275.1	mRNA
Sed0026275.2	Sed0026275.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030150	protein import into mitochondrial matrix
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005744	TIM23 mitochondrial import inner membrane translocase complex