Sed0026268 (gene) Chayote v1

Overview


Name	Sed0026268
Type	gene
Organism	Sechium edule (Chayote v1)
Description	E3 SUMO-protein ligase MMS21
Location	LG04: 37528452 .. 37531031 (+)
RNA-Seq Expression	Sed0026268
Synteny	Sed0026268

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATCCACTTCCAGTTCCCATTCAACCGGCGTTTCCGACCGAATCAAATCCGCCGCCACTATTATGCACTCTGAGAATCAATCCCTTCTTGCCGTAACTTCCTTACTACTTTCAATTTCTTCTTCTTTAGGGTTCTACTTCTATTTCGTTTTCCTGATTCATACAGAAATTTAAGCCCCTCTTTCTAAGTAGATGTTGTTTTTAGCTTTAAGACCCCGATTTTCTTTGTAGAGGGTTAGTTCTAGGGCTACATTCCCTTCTTTTTGGGCTGTGAACTGGGTTTGCTTCATGTCACCGACCCTTTTGCTTCACTTCGTGGTCCGACAAGACGACATAAGGAATTCATGAGTTAAACTTAAAGAATGATTATTAACGATGATGGGTTTATCTGTTTCGATTTTATTGTCTTTATTTCAGGAATTACGGAAGTCGCTGATCATGATGAAGGAAATTGGAGTGGATTTGGAGAAGGACAATCAGTCGAGGATGGTATAATTATGAACTATGGGCCTTATTTTCGAGTTTCAGAAATTATTGTCATTTTTTACTTTTGAAGAGTGTGTTGTTAGGTTAGGACTTAAGGTATTGTTTGTAATGAAATACTAAGAAGCAAGAACACCACAAATTTCATAGATCTTTTCTAGGATTCTCTTCATAAGGCTTTATTTTAACTTCTGCTTCGGAACTTTTATCATCAACCAGCCACTTTGACAAACCGTTTGGATTCAGATATTTGAAATTCTTATTTCTATCTAGTGATATTGCTTCTTTAGGCTTGGGAACCGACATACATTTTGGTTTTTGATCGAATTTCTGTGGATACTACGTTATGAATAAGATTTATTTGAATTGATTCCTTGATTAAAACTTTTGATCTTGGTTTCACAAGTTGTACTTTTAATTAATTTCTATCCCACATGCTTTTTAGTGGATTTTCTGCTTCGGTCTATAAGATCTAATCTAAAGATGATTGAGAATCATTGTTGTTTGTCACTCTTAACCAACTGGTATTTGAACATTATCTTAGGTCAAAGAGCTTGAAAGTTCTGTAGTTGAGCTGTTGAGTACTTATGAAAACTGTAACAACTTTTCATCTGCAATTCAGTCGGTTTCGAACATATATGAACCAAAAGAAGAGGTGCTCTTTCCCTGTTGAATTTTCCACTGCACATTCATTTGTTAATTTTCATTGTGCGAGTTCCTTCCTTTTCATACGGAAGACTTTATGTTGATTTTGTAGTTAACAGATTTTGAGAAACTACTCGACGATGAAGTTGCAAAAGTCAGTGAAAATTCATCTTCAAATCTGCAGAACCATTCTATAATTCGGCAGTTTAGAGAAGCAATTTGGGTATGCATCTTCTTCTCCATCTATGCTCTAAGAAGTACCTTGTCACCCAGAAGAAAATAAATCAGAAAGCCACGGGACAATATTTACGTGCTATTACTTGATTTGATTGTAGTAAATTGTGGATTCCATTATCTCACTTCTTTGATTTTCTATTTGGCGGACTTTAGCACTTATTATGCAGTAACAACAAGAAAATCCTCAAATCAGTGTAAATAATTATCGAGAAATTGTGAAAATGCTCAATGCTTGCAATTTACAAAGCTTGGAAAGCATTTTACTGTTCTTCCAGTTGTACTTATCTCTTGATATTTCTGCAGAATGTTCATCATGCAGGACAACCAATGCCAGGTGAGGAGCAGGAGGACATTGTGATGACCAGTACTCAGTGTAATCTACTGAATGTCACTTGCCCGTTGAGCGGAAAGCCAGTCACTGAATTGGCAGAACCTGTTCGAAGGTATATTGTATTTGCAACTAAAGATACTTTCTTGAAGGATAAATAGTTGGAATAATTTCTGTTACAGTTCAAAAAGAAGTCTGCTCATCACCTTGCTGTTTACCAACAGCATGAATGCATACATGCTATATTTTCTCTAGTTACATTTTTCAAGTGGGTGTCTGAAAATGTAACGAGCTAGTCTGTCACTTGGATCTTCTTCTGTTCCAGAGCTGAGTTTAGATATTGTTTTTTGTTCCTGAAAACAAAGAACCGTCTTAGTTTCTGGAAAAGGTTCATTTACATGGATTGTACGGGCCTTGTTCTTTCTTGGTTTTCTGTTTTTTGAGTTCTACATGGGAGGAGGATTCGAATTTTTTATCTTTTAGAAATTATATACTCAAGCAATTTCGTAGTTTTTTGTTATAGTATCGATCGGCACAATTTCTTTTAACACTGTATAGGTATTTATCTACCTTCTGCAATATGCAGTATGGAATGCAAGCACGTATACGAAAAGGTTGCCATAATGCAGTACCTAAATTCCAAGAGAGCTCGCGCTCGATGCCCTGTTGCTGGTATTTGGATCTACTACATTACATGTTCTAATTACAATAGTTTTAGATTGCTCAACTCAGTTGACATCTTTGTCCTTGTAGCCTGTCCTAAGATGTTGCAGCAGGAAAAGGTCGTTTCCGATCCATTCTTACAGATTGAGATTGATGAACTGCGAAAAACTTCTAGGCATTCTGGGAGGATACAGGATTTCACAGAGGTTGATGCAGATTAG

mRNA sequence

ATGGCATCCACTTCCAGTTCCCATTCAACCGGCGTTTCCGACCGAATCAAATCCGCCGCCACTATTATGCACTCTGAGAATCAATCCCTTCTTGCCGAATTACGGAAGTCGCTGATCATGATGAAGGAAATTGGAGTGGATTTGGAGAAGGACAATCAGTCGAGGATGGTCAAAGAGCTTGAAAGTTCTGTAGTTGAGCTGTTGAGTACTTATGAAAACTGTAACAACTTTTCATCTGCAATTCAGTCGGTTTCGAACATATATGAACCAAAAGAAGAGTTAACAGATTTTGAGAAACTACTCGACGATGAAGTTGCAAAAGTCAGTGAAAATTCATCTTCAAATCTGCAGAACCATTCTATAATTCGGCAGTTTAGAGAAGCAATTTGGAATGTTCATCATGCAGGACAACCAATGCCAGGTGAGGAGCAGGAGGACATTGTGATGACCAGTACTCAGTGTAATCTACTGAATGTCACTTGCCCGTTGAGCGGAAAGCCAGTCACTGAATTGGCAGAACCTGTTCGAAGTATGGAATGCAAGCACGTATACGAAAAGGTTGCCATAATGCAGTACCTAAATTCCAAGAGAGCTCGCGCTCGATGCCCTGTTGCTGCCTGTCCTAAGATGTTGCAGCAGGAAAAGGTCGTTTCCGATCCATTCTTACAGATTGAGATTGATGAACTGCGAAAAACTTCTAGGCATTCTGGGAGGATACAGGATTTCACAGAGGTTGATGCAGATTAG

Coding sequence (CDS)

ATGGCATCCACTTCCAGTTCCCATTCAACCGGCGTTTCCGACCGAATCAAATCCGCCGCCACTATTATGCACTCTGAGAATCAATCCCTTCTTGCCGAATTACGGAAGTCGCTGATCATGATGAAGGAAATTGGAGTGGATTTGGAGAAGGACAATCAGTCGAGGATGGTCAAAGAGCTTGAAAGTTCTGTAGTTGAGCTGTTGAGTACTTATGAAAACTGTAACAACTTTTCATCTGCAATTCAGTCGGTTTCGAACATATATGAACCAAAAGAAGAGTTAACAGATTTTGAGAAACTACTCGACGATGAAGTTGCAAAAGTCAGTGAAAATTCATCTTCAAATCTGCAGAACCATTCTATAATTCGGCAGTTTAGAGAAGCAATTTGGAATGTTCATCATGCAGGACAACCAATGCCAGGTGAGGAGCAGGAGGACATTGTGATGACCAGTACTCAGTGTAATCTACTGAATGTCACTTGCCCGTTGAGCGGAAAGCCAGTCACTGAATTGGCAGAACCTGTTCGAAGTATGGAATGCAAGCACGTATACGAAAAGGTTGCCATAATGCAGTACCTAAATTCCAAGAGAGCTCGCGCTCGATGCCCTGTTGCTGCCTGTCCTAAGATGTTGCAGCAGGAAAAGGTCGTTTCCGATCCATTCTTACAGATTGAGATTGATGAACTGCGAAAAACTTCTAGGCATTCTGGGAGGATACAGGATTTCACAGAGGTTGATGCAGATTAG

Protein sequence

MASTSSSHSTGVSDRIKSAATIMHSENQSLLAELRKSLIMMKEIGVDLEKDNQSRMVKELESSVVELLSTYENCNNFSSAIQSVSNIYEPKEELTDFEKLLDDEVAKVSENSSSNLQNHSIIRQFREAIWNVHHAGQPMPGEEQEDIVMTSTQCNLLNVTCPLSGKPVTELAEPVRSMECKHVYEKVAIMQYLNSKRARARCPVAACPKMLQQEKVVSDPFLQIEIDELRKTSRHSGRIQDFTEVDAD

Homology

[Close]

BLAST of Sed0026268 vs. NCBI nr
Match: XP_022941288.1 (E3 SUMO-protein ligase MMS21 [Cucurbita moschata])

HSP 1 Score: 438.3 bits (1126), Expect = 4.3e-119
Identity = 226/248 (91.13%), Postives = 240/248 (96.77%), Query Frame = 0


Query: 1   MASTSSSHSTGVSDRIKSAATIMHSENQSLLAELRKSLIMMKEIGVDLEKDNQSRMVKEL 60
           MASTS+S+STGVS+RIKSAATIM+SENQSLLAELRKSLIMMKEIGV+LE+DNQSRMVKEL
Sbjct: 1   MASTSNSNSTGVSERIKSAATIMNSENQSLLAELRKSLIMMKEIGVELERDNQSRMVKEL 60

Query: 61  ESSVVELLSTYENCNNFSSAIQSVSNIYEPKEELTDFEKLLDDEVAKVSENSSSNLQNHS 120
           E+SVVELL TYE C+NFSSAIQSV NIYEP+EELTDFEKLLDDEVAKVSENSSSNLQNHS
Sbjct: 61  ENSVVELLGTYEKCSNFSSAIQSVGNIYEPQEELTDFEKLLDDEVAKVSENSSSNLQNHS 120

Query: 121 IIRQFREAIWNVHHAGQPMPGEEQEDIVMTSTQCNLLNVTCPLSGKPVTELAEPVRSMEC 180
           IIRQFREAIWNVHHAGQPMPGEEQED+VMTSTQCNLLNVTCPLSGKPVTELAEPVRS EC
Sbjct: 121 IIRQFREAIWNVHHAGQPMPGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSTEC 180

Query: 181 KHVYEKVAIMQYLNSKRARARCPVAACPKMLQQEKVVSDPFLQIEIDELRKTSRHSGRIQ 240
           KHVYEKVAIMQYL SKR+RA+CPVAACPKMLQ EKV+SDPFL IEIDELRKTS+HS RIQ
Sbjct: 181 KHVYEKVAIMQYLKSKRSRAQCPVAACPKMLQPEKVISDPFLPIEIDELRKTSKHSVRIQ 240

Query: 241 DFTEVDAD 249
           DFTEVDAD
Sbjct: 241 DFTEVDAD 248

[Close]

BLAST of Sed0026268 vs. NCBI nr
Match: XP_023525588.1 (E3 SUMO-protein ligase MMS21 [Cucurbita pepo subsp. pepo] >KAG7037426.1 E3 SUMO-protein ligase MMS21 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 438.0 bits (1125), Expect = 5.6e-119
Identity = 226/248 (91.13%), Postives = 240/248 (96.77%), Query Frame = 0


Query: 1   MASTSSSHSTGVSDRIKSAATIMHSENQSLLAELRKSLIMMKEIGVDLEKDNQSRMVKEL 60
           MASTS+S+STGVS+RIKSAATIM+SENQSLLAELRKSLIMMKEIGVDLE+DNQSRMVKEL
Sbjct: 1   MASTSNSNSTGVSERIKSAATIMNSENQSLLAELRKSLIMMKEIGVDLERDNQSRMVKEL 60

Query: 61  ESSVVELLSTYENCNNFSSAIQSVSNIYEPKEELTDFEKLLDDEVAKVSENSSSNLQNHS 120
           E+SVVELL TYE C+NFSSAIQSV NIYEP+EELTDFEKLLD+EVAKVSENSSSNLQNHS
Sbjct: 61  ENSVVELLGTYEKCSNFSSAIQSVGNIYEPQEELTDFEKLLDNEVAKVSENSSSNLQNHS 120

Query: 121 IIRQFREAIWNVHHAGQPMPGEEQEDIVMTSTQCNLLNVTCPLSGKPVTELAEPVRSMEC 180
           IIRQFREAIWNVHHAGQPMPGEEQED+VMTSTQCNLLNVTCPLSGKPVTELAEPVRS EC
Sbjct: 121 IIRQFREAIWNVHHAGQPMPGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSTEC 180

Query: 181 KHVYEKVAIMQYLNSKRARARCPVAACPKMLQQEKVVSDPFLQIEIDELRKTSRHSGRIQ 240
           KHVYEKVAIMQYL SKR+RA+CPVAACPKMLQ EKV+SDPFL IEIDELRKTS+HS RIQ
Sbjct: 181 KHVYEKVAIMQYLKSKRSRAQCPVAACPKMLQPEKVISDPFLPIEIDELRKTSKHSVRIQ 240

Query: 241 DFTEVDAD 249
           DFTEVDAD
Sbjct: 241 DFTEVDAD 248

[Close]

BLAST of Sed0026268 vs. NCBI nr
Match: KAG6607898.1 (E3 SUMO-protein ligase MMS21, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 436.0 bits (1120), Expect = 2.1e-118
Identity = 225/248 (90.73%), Postives = 239/248 (96.37%), Query Frame = 0


Query: 1   MASTSSSHSTGVSDRIKSAATIMHSENQSLLAELRKSLIMMKEIGVDLEKDNQSRMVKEL 60
           MASTS+S+STGVS+RIKSAATIM+SENQSLLAELRKSLIMMKEIGVDLE+DNQSRMVKEL
Sbjct: 1   MASTSNSNSTGVSERIKSAATIMNSENQSLLAELRKSLIMMKEIGVDLERDNQSRMVKEL 60

Query: 61  ESSVVELLSTYENCNNFSSAIQSVSNIYEPKEELTDFEKLLDDEVAKVSENSSSNLQNHS 120
           E+SVVELL TYE C+NFSSAIQSV NIYEP+EELTDFEKLLD+EVAKVSENSSSNL NHS
Sbjct: 61  ENSVVELLGTYEKCSNFSSAIQSVGNIYEPQEELTDFEKLLDNEVAKVSENSSSNLHNHS 120

Query: 121 IIRQFREAIWNVHHAGQPMPGEEQEDIVMTSTQCNLLNVTCPLSGKPVTELAEPVRSMEC 180
           IIRQFREAIWNVHHAGQPMPGEEQED+VMTSTQCNLLNVTCPLSGKPVTELAEPVRS EC
Sbjct: 121 IIRQFREAIWNVHHAGQPMPGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSTEC 180

Query: 181 KHVYEKVAIMQYLNSKRARARCPVAACPKMLQQEKVVSDPFLQIEIDELRKTSRHSGRIQ 240
           KHVYEKVAIMQYL SKR+RA+CPVAACPKMLQ EKV+SDPFL IEIDELRKTS+HS RIQ
Sbjct: 181 KHVYEKVAIMQYLKSKRSRAQCPVAACPKMLQPEKVISDPFLPIEIDELRKTSKHSVRIQ 240

Query: 241 DFTEVDAD 249
           DFTEVDAD
Sbjct: 241 DFTEVDAD 248

[Close]

BLAST of Sed0026268 vs. NCBI nr
Match: XP_022981951.1 (E3 SUMO-protein ligase MMS21 [Cucurbita maxima])

HSP 1 Score: 434.5 bits (1116), Expect = 6.2e-118
Identity = 227/250 (90.80%), Postives = 241/250 (96.40%), Query Frame = 0


Query: 1   MAST--SSSHSTGVSDRIKSAATIMHSENQSLLAELRKSLIMMKEIGVDLEKDNQSRMVK 60
           MAST  S+S+STGVS+RIKSAATIM+SENQSLLAELRKSLIMMKEIGVDLE+DNQSRMVK
Sbjct: 1   MASTSNSNSNSTGVSERIKSAATIMNSENQSLLAELRKSLIMMKEIGVDLERDNQSRMVK 60

Query: 61  ELESSVVELLSTYENCNNFSSAIQSVSNIYEPKEELTDFEKLLDDEVAKVSENSSSNLQN 120
           ELE+SVVELLSTYE C+NFSSAIQSV NIYEP+EELTDFEKLLD+EVAKVSENSSSNLQN
Sbjct: 61  ELENSVVELLSTYEKCSNFSSAIQSVGNIYEPQEELTDFEKLLDNEVAKVSENSSSNLQN 120

Query: 121 HSIIRQFREAIWNVHHAGQPMPGEEQEDIVMTSTQCNLLNVTCPLSGKPVTELAEPVRSM 180
           HSIIRQFREAIWNVHHAGQPMPGEEQED+VMTSTQCNLLNVTCPLSGKPVTELAEPVRS 
Sbjct: 121 HSIIRQFREAIWNVHHAGQPMPGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRST 180

Query: 181 ECKHVYEKVAIMQYLNSKRARARCPVAACPKMLQQEKVVSDPFLQIEIDELRKTSRHSGR 240
           ECKHVYEKVAIMQYL SKR+RA+CPVAACPKMLQ EKV+SDPFL IEIDELRKTS+HS R
Sbjct: 181 ECKHVYEKVAIMQYLKSKRSRAQCPVAACPKMLQPEKVISDPFLPIEIDELRKTSKHSVR 240

Query: 241 IQDFTEVDAD 249
           IQDFTEVDAD
Sbjct: 241 IQDFTEVDAD 250

[Close]

BLAST of Sed0026268 vs. NCBI nr
Match: XP_038897059.1 (E3 SUMO-protein ligase MMS21 isoform X1 [Benincasa hispida])

HSP 1 Score: 421.8 bits (1083), Expect = 4.1e-114
Identity = 217/248 (87.50%), Postives = 230/248 (92.74%), Query Frame = 0


Query: 1   MASTSSSHSTGVSDRIKSAATIMHSENQSLLAELRKSLIMMKEIGVDLEKDNQSRMVKEL 60
           MAS S S S GVS RIKSAATIMHSENQSLLAELRK+LIMMKEIGV+LE+DNQSRMVKEL
Sbjct: 1   MASASDSRSNGVSGRIKSAATIMHSENQSLLAELRKALIMMKEIGVELERDNQSRMVKEL 60

Query: 61  ESSVVELLSTYENCNNFSSAIQSVSNIYEPKEELTDFEKLLDDEVAKVSENSSSNLQNHS 120
           E+SVVELLSTYENCNNFS AIQSV NIYEPKEELTDF KLLDDEVAKVS++SSSNL NHS
Sbjct: 61  ENSVVELLSTYENCNNFSLAIQSVGNIYEPKEELTDFGKLLDDEVAKVSQDSSSNLMNHS 120

Query: 121 IIRQFREAIWNVHHAGQPMPGEEQEDIVMTSTQCNLLNVTCPLSGKPVTELAEPVRSMEC 180
           IIRQFREA+WNVHHAGQPMPGEE+EDIVMTSTQCNLLNVTCPLSGKPV EL EPVRS EC
Sbjct: 121 IIRQFREAVWNVHHAGQPMPGEEKEDIVMTSTQCNLLNVTCPLSGKPVIELTEPVRSAEC 180

Query: 181 KHVYEKVAIMQYLNSKRARARCPVAACPKMLQQEKVVSDPFLQIEIDELRKTSRHSGRIQ 240
           KHVYEK AIMQYL SK++RA+CPVAACPKMLQ +KVV DPFLQIEIDELRK SRHS RIQ
Sbjct: 181 KHVYEKAAIMQYLKSKKSRAQCPVAACPKMLQSDKVVPDPFLQIEIDELRKISRHSDRIQ 240

Query: 241 DFTEVDAD 249
           DFTE+DAD
Sbjct: 241 DFTELDAD 248

[Close]

BLAST of Sed0026268 vs. ExPASy Swiss-Prot
Match: Q8GYH7 (E3 SUMO-protein ligase MMS21 OS=Arabidopsis thaliana OX=3702 GN=MMS21 PE=1 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 2.4e-72
Identity = 143/248 (57.66%), Postives = 187/248 (75.40%), Query Frame = 0


Query: 5   SSSHSTGVSDRIKSAATIMHSENQSLLAELRKSLIMMKEIGVDLEKDNQSRMVKELESSV 64
           S+S S GV+ RI++A+ ++ S+N S LA++RK++ MMK I V LEK+NQ+  VK+LE+SV
Sbjct: 3   SASSSDGVAGRIQNASLVLVSDNSSTLADIRKAVAMMKNIAVQLEKENQTDKVKDLENSV 62

Query: 65  VELLSTYENCNNFSSAIQSVSNIYEPKEELTDFEKLLDDEVAKVSENSSSNLQNHSIIRQ 124
            ELL  + +CN+ S+AIQSV+N Y+P E+LTDF+KLLDDE  K+    SS  QN  ++RQ
Sbjct: 63  AELLDLHSDCNHRSTAIQSVANRYQPVEQLTDFKKLLDDEFTKLKATPSSVPQNDHLMRQ 122

Query: 125 FREAIWNVHHAGQPMPGEEQEDIVMTSTQCNLLNVTCPLSGKPVTELAEPVRSMECKHVY 184
           FREA+WNVHHAG+PMPG++ EDIVMTSTQC LLN+TCPLSGKPVTELA+PVRSM+C+HVY
Sbjct: 123 FREAVWNVHHAGEPMPGDDDEDIVMTSTQCPLLNMTCPLSGKPVTELADPVRSMDCRHVY 182

Query: 185 EKVAIMQYLNSKRARARCPVAACPKMLQQEKVVSDPFLQIEIDELRKTSRHSGR---IQD 244
           EK  I+ Y+      A CPVA C   LQ  KV+ D  L+ EI+E+R  ++ S R   I+D
Sbjct: 183 EKSVILHYI-VNNPNANCPVAGCRGKLQNSKVICDAMLKFEIEEMRSLNKQSNRAEVIED 242

Query: 245 FTE-VDAD 249
           FTE VD D
Sbjct: 243 FTEDVDED 249

[Close]

BLAST of Sed0026268 vs. ExPASy TrEMBL
Match: A0A6J1FRP6 (E3 SUMO-protein ligase MMS21 OS=Cucurbita moschata OX=3662 GN=LOC111446631 PE=3 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 2.1e-119
Identity = 226/248 (91.13%), Postives = 240/248 (96.77%), Query Frame = 0


Query: 1   MASTSSSHSTGVSDRIKSAATIMHSENQSLLAELRKSLIMMKEIGVDLEKDNQSRMVKEL 60
           MASTS+S+STGVS+RIKSAATIM+SENQSLLAELRKSLIMMKEIGV+LE+DNQSRMVKEL
Sbjct: 1   MASTSNSNSTGVSERIKSAATIMNSENQSLLAELRKSLIMMKEIGVELERDNQSRMVKEL 60

Query: 61  ESSVVELLSTYENCNNFSSAIQSVSNIYEPKEELTDFEKLLDDEVAKVSENSSSNLQNHS 120
           E+SVVELL TYE C+NFSSAIQSV NIYEP+EELTDFEKLLDDEVAKVSENSSSNLQNHS
Sbjct: 61  ENSVVELLGTYEKCSNFSSAIQSVGNIYEPQEELTDFEKLLDDEVAKVSENSSSNLQNHS 120

Query: 121 IIRQFREAIWNVHHAGQPMPGEEQEDIVMTSTQCNLLNVTCPLSGKPVTELAEPVRSMEC 180
           IIRQFREAIWNVHHAGQPMPGEEQED+VMTSTQCNLLNVTCPLSGKPVTELAEPVRS EC
Sbjct: 121 IIRQFREAIWNVHHAGQPMPGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSTEC 180

Query: 181 KHVYEKVAIMQYLNSKRARARCPVAACPKMLQQEKVVSDPFLQIEIDELRKTSRHSGRIQ 240
           KHVYEKVAIMQYL SKR+RA+CPVAACPKMLQ EKV+SDPFL IEIDELRKTS+HS RIQ
Sbjct: 181 KHVYEKVAIMQYLKSKRSRAQCPVAACPKMLQPEKVISDPFLPIEIDELRKTSKHSVRIQ 240

Query: 241 DFTEVDAD 249
           DFTEVDAD
Sbjct: 241 DFTEVDAD 248

[Close]

BLAST of Sed0026268 vs. ExPASy TrEMBL
Match: A0A6J1IXZ2 (E3 SUMO-protein ligase MMS21 OS=Cucurbita maxima OX=3661 GN=LOC111480943 PE=3 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 3.0e-118
Identity = 227/250 (90.80%), Postives = 241/250 (96.40%), Query Frame = 0


Query: 1   MAST--SSSHSTGVSDRIKSAATIMHSENQSLLAELRKSLIMMKEIGVDLEKDNQSRMVK 60
           MAST  S+S+STGVS+RIKSAATIM+SENQSLLAELRKSLIMMKEIGVDLE+DNQSRMVK
Sbjct: 1   MASTSNSNSNSTGVSERIKSAATIMNSENQSLLAELRKSLIMMKEIGVDLERDNQSRMVK 60

Query: 61  ELESSVVELLSTYENCNNFSSAIQSVSNIYEPKEELTDFEKLLDDEVAKVSENSSSNLQN 120
           ELE+SVVELLSTYE C+NFSSAIQSV NIYEP+EELTDFEKLLD+EVAKVSENSSSNLQN
Sbjct: 61  ELENSVVELLSTYEKCSNFSSAIQSVGNIYEPQEELTDFEKLLDNEVAKVSENSSSNLQN 120

Query: 121 HSIIRQFREAIWNVHHAGQPMPGEEQEDIVMTSTQCNLLNVTCPLSGKPVTELAEPVRSM 180
           HSIIRQFREAIWNVHHAGQPMPGEEQED+VMTSTQCNLLNVTCPLSGKPVTELAEPVRS 
Sbjct: 121 HSIIRQFREAIWNVHHAGQPMPGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRST 180

Query: 181 ECKHVYEKVAIMQYLNSKRARARCPVAACPKMLQQEKVVSDPFLQIEIDELRKTSRHSGR 240
           ECKHVYEKVAIMQYL SKR+RA+CPVAACPKMLQ EKV+SDPFL IEIDELRKTS+HS R
Sbjct: 181 ECKHVYEKVAIMQYLKSKRSRAQCPVAACPKMLQPEKVISDPFLPIEIDELRKTSKHSVR 240

Query: 241 IQDFTEVDAD 249
           IQDFTEVDAD
Sbjct: 241 IQDFTEVDAD 250

[Close]

BLAST of Sed0026268 vs. ExPASy TrEMBL
Match: A0A6J1CCS6 (E3 SUMO-protein ligase MMS21 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010470 PE=3 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 7.6e-114
Identity = 215/248 (86.69%), Postives = 233/248 (93.95%), Query Frame = 0


Query: 1   MASTSSSHSTGVSDRIKSAATIMHSENQSLLAELRKSLIMMKEIGVDLEKDNQSRMVKEL 60
           MASTS + S+ VS RIKSAAT+MHSENQSLLAE+RK LIMMKEIG+DLE+DNQS MVK+L
Sbjct: 1   MASTSDTRSSAVSGRIKSAATMMHSENQSLLAEIRKLLIMMKEIGMDLERDNQSTMVKKL 60

Query: 61  ESSVVELLSTYENCNNFSSAIQSVSNIYEPKEELTDFEKLLDDEVAKVSENSSSNLQNHS 120
           E++VVELLSTYENC+NFSSAIQSV NIYEP+EELTDFEKLLDDEVAKVSENSSSNLQNHS
Sbjct: 61  ENAVVELLSTYENCDNFSSAIQSVGNIYEPREELTDFEKLLDDEVAKVSENSSSNLQNHS 120

Query: 121 IIRQFREAIWNVHHAGQPMPGEEQEDIVMTSTQCNLLNVTCPLSGKPVTELAEPVRSMEC 180
           IIR+FREAIWNVHHAGQPMPGEEQEDIVMTSTQCNLLNVTCPLSGKPVTELA+PVRSMEC
Sbjct: 121 IIRKFREAIWNVHHAGQPMPGEEQEDIVMTSTQCNLLNVTCPLSGKPVTELAQPVRSMEC 180

Query: 181 KHVYEKVAIMQYLNSKRARARCPVAACPKMLQQEKVVSDPFLQIEIDELRKTSRHSGRIQ 240
           KHVYEK A+MQYL SK +RA+CPVAACPKMLQ EKV  DPFL IEIDELRKTSRHS RIQ
Sbjct: 181 KHVYEKEAVMQYLRSKNSRAQCPVAACPKMLQPEKVTPDPFLLIEIDELRKTSRHSVRIQ 240

Query: 241 DFTEVDAD 249
           DFTE+DA+
Sbjct: 241 DFTELDAE 248

[Close]

BLAST of Sed0026268 vs. ExPASy TrEMBL
Match: A0A5D3DWX9 (E3 SUMO-protein ligase MMS21 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001530 PE=3 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 1.0e-113
Identity = 215/248 (86.69%), Postives = 229/248 (92.34%), Query Frame = 0


Query: 1   MASTSSSHSTGVSDRIKSAATIMHSENQSLLAELRKSLIMMKEIGVDLEKDNQSRMVKEL 60
           MAS S S STGV+ RIKSAATIMHSENQSLLAELRK+LIMMKEIGVDLEK+NQ++MVKEL
Sbjct: 1   MASASDSRSTGVTGRIKSAATIMHSENQSLLAELRKTLIMMKEIGVDLEKENQNKMVKEL 60

Query: 61  ESSVVELLSTYENCNNFSSAIQSVSNIYEPKEELTDFEKLLDDEVAKVSENSSSNLQNHS 120
           E S+VELLS YENCNNFSSAIQSV N YEPKEELTDFEKLLDDEVAKVS NSSSN  NH 
Sbjct: 61  EKSMVELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVSVNSSSNFANHP 120

Query: 121 IIRQFREAIWNVHHAGQPMPGEEQEDIVMTSTQCNLLNVTCPLSGKPVTELAEPVRSMEC 180
           IIRQFREAIWNVHHAGQPM GEEQED+VMTSTQCNLLNVTCPLSGKPVTELAEPVRS EC
Sbjct: 121 IIRQFREAIWNVHHAGQPMAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSAEC 180

Query: 181 KHVYEKVAIMQYLNSKRARARCPVAACPKMLQQEKVVSDPFLQIEIDELRKTSRHSGRIQ 240
           KH+YEK AIMQYLNSK++RA+CPVAACPKMLQ +KVV DPFL+IEIDELRK SRHS RIQ
Sbjct: 181 KHIYEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKMSRHSERIQ 240

Query: 241 DFTEVDAD 249
           DFTE+DAD
Sbjct: 241 DFTELDAD 248

[Close]

BLAST of Sed0026268 vs. ExPASy TrEMBL
Match: A0A1S3CLF9 (E3 SUMO-protein ligase MMS21 OS=Cucumis melo OX=3656 GN=LOC103501788 PE=3 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 1.0e-113
Identity = 215/248 (86.69%), Postives = 229/248 (92.34%), Query Frame = 0


Query: 1   MASTSSSHSTGVSDRIKSAATIMHSENQSLLAELRKSLIMMKEIGVDLEKDNQSRMVKEL 60
           MAS S S STGV+ RIKSAATIMHSENQSLLAELRK+LIMMKEIGVDLEK+NQ++MVKEL
Sbjct: 1   MASASDSRSTGVTGRIKSAATIMHSENQSLLAELRKTLIMMKEIGVDLEKENQNKMVKEL 60

Query: 61  ESSVVELLSTYENCNNFSSAIQSVSNIYEPKEELTDFEKLLDDEVAKVSENSSSNLQNHS 120
           E S+VELLS YENCNNFSSAIQSV N YEPKEELTDFEKLLDDEVAKVS NSSSN  NH 
Sbjct: 61  EKSMVELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVSVNSSSNFANHP 120

Query: 121 IIRQFREAIWNVHHAGQPMPGEEQEDIVMTSTQCNLLNVTCPLSGKPVTELAEPVRSMEC 180
           IIRQFREAIWNVHHAGQPM GEEQED+VMTSTQCNLLNVTCPLSGKPVTELAEPVRS EC
Sbjct: 121 IIRQFREAIWNVHHAGQPMAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSAEC 180

Query: 181 KHVYEKVAIMQYLNSKRARARCPVAACPKMLQQEKVVSDPFLQIEIDELRKTSRHSGRIQ 240
           KH+YEK AIMQYLNSK++RA+CPVAACPKMLQ +KVV DPFL+IEIDELRK SRHS RIQ
Sbjct: 181 KHIYEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKMSRHSERIQ 240

Query: 241 DFTEVDAD 249
           DFTE+DAD
Sbjct: 241 DFTELDAD 248

[Close]

BLAST of Sed0026268 vs. TAIR 10
Match: AT3G15150.1 (RING/U-box superfamily protein )

HSP 1 Score: 273.5 bits (698), Expect = 1.7e-73
Identity = 143/248 (57.66%), Postives = 187/248 (75.40%), Query Frame = 0


Query: 5   SSSHSTGVSDRIKSAATIMHSENQSLLAELRKSLIMMKEIGVDLEKDNQSRMVKELESSV 64
           S+S S GV+ RI++A+ ++ S+N S LA++RK++ MMK I V LEK+NQ+  VK+LE+SV
Sbjct: 3   SASSSDGVAGRIQNASLVLVSDNSSTLADIRKAVAMMKNIAVQLEKENQTDKVKDLENSV 62

Query: 65  VELLSTYENCNNFSSAIQSVSNIYEPKEELTDFEKLLDDEVAKVSENSSSNLQNHSIIRQ 124
            ELL  + +CN+ S+AIQSV+N Y+P E+LTDF+KLLDDE  K+    SS  QN  ++RQ
Sbjct: 63  AELLDLHSDCNHRSTAIQSVANRYQPVEQLTDFKKLLDDEFTKLKATPSSVPQNDHLMRQ 122

Query: 125 FREAIWNVHHAGQPMPGEEQEDIVMTSTQCNLLNVTCPLSGKPVTELAEPVRSMECKHVY 184
           FREA+WNVHHAG+PMPG++ EDIVMTSTQC LLN+TCPLSGKPVTELA+PVRSM+C+HVY
Sbjct: 123 FREAVWNVHHAGEPMPGDDDEDIVMTSTQCPLLNMTCPLSGKPVTELADPVRSMDCRHVY 182

Query: 185 EKVAIMQYLNSKRARARCPVAACPKMLQQEKVVSDPFLQIEIDELRKTSRHSGR---IQD 244
           EK  I+ Y+      A CPVA C   LQ  KV+ D  L+ EI+E+R  ++ S R   I+D
Sbjct: 183 EKSVILHYI-VNNPNANCPVAGCRGKLQNSKVICDAMLKFEIEEMRSLNKQSNRAEVIED 242

Query: 245 FTE-VDAD 249
           FTE VD D
Sbjct: 243 FTEDVDED 249

The following BLAST results are available for this feature:

BLAST of Sed0026268 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022941288.1	4.3e-119	91.13	E3 SUMO-protein ligase MMS21 [Cucurbita moschata]	[more]
XP_023525588.1	5.6e-119	91.13	E3 SUMO-protein ligase MMS21 [Cucurbita pepo subsp. pepo] >KAG7037426.1 E3 SUMO-...	[more]
KAG6607898.1	2.1e-118	90.73	E3 SUMO-protein ligase MMS21, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022981951.1	6.2e-118	90.80	E3 SUMO-protein ligase MMS21 [Cucurbita maxima]	[more]
XP_038897059.1	4.1e-114	87.50	E3 SUMO-protein ligase MMS21 isoform X1 [Benincasa hispida]	[more]

BLAST of Sed0026268 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GYH7	2.4e-72	57.66	E3 SUMO-protein ligase MMS21 OS=Arabidopsis thaliana OX=3702 GN=MMS21 PE=1 SV=1	[more]

BLAST of Sed0026268 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FRP6	2.1e-119	91.13	E3 SUMO-protein ligase MMS21 OS=Cucurbita moschata OX=3662 GN=LOC111446631 PE=3 ...	[more]
A0A6J1IXZ2	3.0e-118	90.80	E3 SUMO-protein ligase MMS21 OS=Cucurbita maxima OX=3661 GN=LOC111480943 PE=3 SV...	[more]
A0A6J1CCS6	7.6e-114	86.69	E3 SUMO-protein ligase MMS21 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A5D3DWX9	1.0e-113	86.69	E3 SUMO-protein ligase MMS21 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3CLF9	1.0e-113	86.69	E3 SUMO-protein ligase MMS21 OS=Cucumis melo OX=3656 GN=LOC103501788 PE=3 SV=1	[more]

BLAST of Sed0026268 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15150.1	1.7e-73	57.66	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004181	Zinc finger, MIZ-type	PFAM	PF11789	zf-Nse	coord: 145..207 e-value: 9.5E-15 score: 54.3
IPR004181	Zinc finger, MIZ-type	CDD	cd16651	SPL-RING_NSE2	coord: 160..228 e-value: 1.97393E-24 score: 90.7668
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 153..239 e-value: 6.0E-19 score: 70.1
IPR026846	E3 SUMO-protein ligase Nse2 (Mms21)	PANTHER	PTHR21330	UNCHARACTERIZED	coord: 7..236
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 159..231

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0026268.1	Sed0026268.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000724	double-strand break repair via homologous recombination
biological_process	GO:0060250	germ-line stem-cell niche homeostasis
biological_process	GO:0032876	negative regulation of DNA endoreduplication
biological_process	GO:0008284	positive regulation of cell population proliferation
biological_process	GO:0080038	positive regulation of cytokinin-activated signaling pathway
biological_process	GO:0045931	positive regulation of mitotic cell cycle
biological_process	GO:0016925	protein sumoylation
biological_process	GO:0048509	regulation of meristem development
biological_process	GO:0010082	regulation of root meristem growth
cellular_component	GO:0005634	nucleus
cellular_component	GO:0030915	Smc5-Smc6 complex
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0061665	SUMO ligase activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0019789	SUMO transferase activity