Sed0026265 (gene) Chayote v1

Overview


Name	Sed0026265
Type	gene
Organism	Sechium edule (Chayote v1)
Description	LOB domain-containing protein
Location	LG08: 32530481 .. 32531927 (-)
RNA-Seq Expression	Sed0026265
Synteny	Sed0026265

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATTCCGCCGCAGAACCCACCGGAACGCCCGCCGTTCATTTTCCGGCGACAAACGCCTGCGCCGCCTGTAAATTCCAGCGAAGAAAATGCTCAACGGACTGTCCTCTGGCTCCGTATTTCCCCGCCAACCGCCTCCAAGACTTCCAAAACGTCCGCCGGTTGTTCGGCGTGAAGAACGTCTTGAAAACCCTCGCCGATGTGGATCCGTCGGAGCGATTCGCGGCGGCGGAGTGCATGATCTTCGAGGCCAACTGCCGCGCGAATGATCCGGCCGGTGGCTGCTACGGAGTGATCGCTTCGTTGCAGCGCGAGATCATGCTGTTGGAGGCTCAGCGCCAGCGCTTGCTGCTTCTACTCCGGATTTACCGGCCGGCGACGGAGGAATCGATCGGCGGCGGTGCGGCCGGTACGGAGATCTGCGGTAAGGAGAATTTGTGTTCTTCTGATTTGGTTGGTTTGTGTGAATCGGAGAGTGATTTCGAGGATCGATTTGAGCCGTTGATTAAGAAGGAGAATTTTGTTGGTGATTTTGATTTGAAGGATATGCATTAGGGCTTTGAGTAGGGTTTTTTTTTACATTTTGATTATCATTTTGAATGTTTGTTGCAAGGAGAATATTGATATGCTTCAAATATTGTGAATACTAAAATTGGGGAAGATTGCCCTATAATTTAGGTGACTTGTTTGATTCTTTTTTTTTGTTTGGATTTGTACATGATTGATTTATAGTGTCAATTTTGTTTCAATGTTTCAAAATAAAATATTTGTATCATTTCAATGTTGCTCAATTTTAGTGTGGTTGTGAGTTTTTTTTTTTTTTTTTGAATTAAGTGTGGTTGTGTTTTTTGAGTCTAGGTTTATATTTATTTCTTTTTATCAAAATAAAAGTAACCATTGTATCAATATATCAAAATTTATCATTTTTTTTTTTTAGACAAAAAATTTAATATTATTTAGTTATACTATCATAGTCAACATTAGTTCGAGTCTTCCTTGTGACAATACTCTTTCAATGTCTCCAGTGTCTAGCCTAGGGACGGGCATGATTACCTTGTTTCAAAAAAAAAAACATTAAGTCATGTACTAATGCTCTACCGGAACATTTTTTAAATATAAGAGATAAATGTGCTTGGGAACTAAATAAAACTATACCTCAAATTTATGGACAAAAAAATATATTTTTTCCAATTTTGTTTTTTGTAAAATCATCTACCAACTATTTCCTTGTTTCACAAAAGAATCTTTTTGTATTTATATAAGTAGTCAGTGTTTGAATAATCACTATAAATTATTTTGTTGTTAAATAAATTTTTAATAAATTATTTTTTGGTGAGTAATCACTATAAATTTTGAATTTAAAATTACTTTAAAGATTCTCATGATTCTTTAATCAATTCATTGTAGTTGAACAAGACTATGTTCATCTTTTAGGCAAGAGTATTGA

mRNA sequence

ATGAATTCCGCCGCAGAACCCACCGGAACGCCCGCCGTTCATTTTCCGGCGACAAACGCCTGCGCCGCCTGTAAATTCCAGCGAAGAAAATGCTCAACGGACTGTCCTCTGGCTCCGTATTTCCCCGCCAACCGCCTCCAAGACTTCCAAAACGTCCGCCGGTTGTTCGGCGTGAAGAACGTCTTGAAAACCCTCGCCGATGTGGATCCGTCGGAGCGATTCGCGGCGGCGGAGTGCATGATCTTCGAGGCCAACTGCCGCGCGAATGATCCGGCCGGTGGCTGCTACGGAGTGATCGCTTCGTTGCAGCGCGAGATCATGCTGTTGGAGGCTCAGCGCCAGCGCTTGCTGCTTCTACTCCGGATTTACCGGCCGGCGACGGAGGAATCGATCGGCGGCGGTGCGGCCGGTACGGAGATCTGCGGTAAGGAGAATTTGTGTTCTTCTGATTTGGTTGGTTTGTGTGAATCGGAGAGTGATTTCGAGGATCGATTTGAGCCACTATGTTCATCTTTTAGGCAAGAGTATTGA

Coding sequence (CDS)

ATGAATTCCGCCGCAGAACCCACCGGAACGCCCGCCGTTCATTTTCCGGCGACAAACGCCTGCGCCGCCTGTAAATTCCAGCGAAGAAAATGCTCAACGGACTGTCCTCTGGCTCCGTATTTCCCCGCCAACCGCCTCCAAGACTTCCAAAACGTCCGCCGGTTGTTCGGCGTGAAGAACGTCTTGAAAACCCTCGCCGATGTGGATCCGTCGGAGCGATTCGCGGCGGCGGAGTGCATGATCTTCGAGGCCAACTGCCGCGCGAATGATCCGGCCGGTGGCTGCTACGGAGTGATCGCTTCGTTGCAGCGCGAGATCATGCTGTTGGAGGCTCAGCGCCAGCGCTTGCTGCTTCTACTCCGGATTTACCGGCCGGCGACGGAGGAATCGATCGGCGGCGGTGCGGCCGGTACGGAGATCTGCGGTAAGGAGAATTTGTGTTCTTCTGATTTGGTTGGTTTGTGTGAATCGGAGAGTGATTTCGAGGATCGATTTGAGCCACTATGTTCATCTTTTAGGCAAGAGTATTGA

Protein sequence

MNSAAEPTGTPAVHFPATNACAACKFQRRKCSTDCPLAPYFPANRLQDFQNVRRLFGVKNVLKTLADVDPSERFAAAECMIFEANCRANDPAGGCYGVIASLQREIMLLEAQRQRLLLLLRIYRPATEESIGGGAAGTEICGKENLCSSDLVGLCESESDFEDRFEPLCSSFRQEY

Homology

[Close]

BLAST of Sed0026265 vs. NCBI nr
Match: XP_038886742.1 (LOB domain-containing protein 22-like [Benincasa hispida])

HSP 1 Score: 175.3 bits (443), Expect = 4.8e-40
Identity = 85/118 (72.03%), Postives = 97/118 (82.20%), Query Frame = 0


Query: 14  HFPATNACAACKFQRRKCSTDCPLAPYFPANRLQDFQNVRRLFGVKNVLKTLADVDPSER 73
           + P+T ACAACKFQRRKCS DCPLAPYFPA+RLQDFQNVR+LFGVKNVLKTLAD++P  R
Sbjct: 23  NLPST-ACAACKFQRRKCSADCPLAPYFPAHRLQDFQNVRKLFGVKNVLKTLADLEPDNR 82

Query: 74  FAAAECMIFEANCRANDPAGGCYGVIASLQREIMLLEAQRQRLLLLLRIYRPATEESI 132
           F A ECMIFEANCRA+D AGGCY +IA LQ EI LLEAQ + +L  LR +R  T  +I
Sbjct: 83  FKAVECMIFEANCRASDLAGGCYKIIAKLQSEITLLEAQHRAVLRQLRFFRQTTAAAI 139

[Close]

BLAST of Sed0026265 vs. NCBI nr
Match: XP_022132086.1 (LOB domain-containing protein 25-like [Momordica charantia])

HSP 1 Score: 166.0 bits (419), Expect = 2.9e-37
Identity = 85/118 (72.03%), Postives = 94/118 (79.66%), Query Frame = 0


Query: 7   PTGTPAVHFPATNACAACKFQRRKCSTDCPLAPYFPANRLQDFQNVRRLFGVKNVLKTLA 66
           PT T A    A  ACAACKFQRRKCS DCPLAPYFPA+R ++FQNVRRLFGVKNVLKTL 
Sbjct: 22  PTETAAA-AAAAQACAACKFQRRKCSPDCPLAPYFPADRPKNFQNVRRLFGVKNVLKTLR 81

Query: 67  DVDPSERFAAAECMIFEANCRANDPAGGCYGVIASLQREIMLLEAQRQRLLLLLRIYR 125
           DV+PS R AAAECMIFEANCRA+D AGGCY +IA LQ EI  LEAQ+  +L  L I+R
Sbjct: 82  DVEPSNRAAAAECMIFEANCRADDLAGGCYKIIAELQSEITFLEAQQNLVLRQLCIFR 138

[Close]

BLAST of Sed0026265 vs. NCBI nr
Match: XP_022997547.1 (LOB domain-containing protein 22-like [Cucurbita maxima])

HSP 1 Score: 164.5 bits (415), Expect = 8.5e-37
Identity = 75/112 (66.96%), Postives = 93/112 (83.04%), Query Frame = 0


Query: 13  VHFPATNACAACKFQRRKCSTDCPLAPYFPANRLQDFQNVRRLFGVKNVLKTLADVDPSE 72
           ++ P   ACAACKFQRRKC+ DCPLAPYFPA+R ++F+NVR+LFGVKNVLKTL D++PS+
Sbjct: 21  LNLPTMQACAACKFQRRKCTADCPLAPYFPADRFREFRNVRKLFGVKNVLKTLGDLEPSK 80

Query: 73  RFAAAECMIFEANCRANDPAGGCYGVIASLQREIMLLEAQRQRLLLLLRIYR 125
           R  A +C+IFEANCRAND AGGCY +IA +QREI LLEAQ + +L  LR +R
Sbjct: 81  RRDAVQCIIFEANCRANDLAGGCYKIIAKMQREITLLEAQHRLVLRQLRFFR 132

[Close]

BLAST of Sed0026265 vs. NCBI nr
Match: XP_022962555.1 (LOB domain-containing protein 22-like [Cucurbita moschata])

HSP 1 Score: 162.5 bits (410), Expect = 3.2e-36
Identity = 75/109 (68.81%), Postives = 90/109 (82.57%), Query Frame = 0


Query: 16  PATNACAACKFQRRKCSTDCPLAPYFPANRLQDFQNVRRLFGVKNVLKTLADVDPSERFA 75
           P   ACAACKFQRRKC+ DCPLAPYFPA R ++F+NVR+LFGVKNVLKTL D++PS+R  
Sbjct: 24  PTMQACAACKFQRRKCTADCPLAPYFPAERFREFRNVRKLFGVKNVLKTLGDLEPSKRRD 83

Query: 76  AAECMIFEANCRANDPAGGCYGVIASLQREIMLLEAQRQRLLLLLRIYR 125
           A +C+IFEANCRA+D AGGCY +IA +QREI LLEAQ + +L  LR YR
Sbjct: 84  AVQCIIFEANCRASDLAGGCYKIIAKMQREITLLEAQHRLVLRQLRFYR 132

[Close]

BLAST of Sed0026265 vs. NCBI nr
Match: KAG7029263.1 (LOB domain-containing protein 22, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 162.5 bits (410), Expect = 3.2e-36
Identity = 75/109 (68.81%), Postives = 90/109 (82.57%), Query Frame = 0


Query: 16  PATNACAACKFQRRKCSTDCPLAPYFPANRLQDFQNVRRLFGVKNVLKTLADVDPSERFA 75
           P   ACAACKFQRRKC+ DCPLAPYFPA R ++F+NVR+LFGVKNVLKTL D++PS+R  
Sbjct: 24  PTMQACAACKFQRRKCTADCPLAPYFPAERFREFRNVRKLFGVKNVLKTLGDLEPSKRRD 83

Query: 76  AAECMIFEANCRANDPAGGCYGVIASLQREIMLLEAQRQRLLLLLRIYR 125
           A +C+IFEANCRA+D AGGCY +IA +QREI LLEAQ + +L  LR YR
Sbjct: 84  AVQCIIFEANCRASDLAGGCYKIIAKMQREITLLEAQHRLVLRQLRFYR 132

[Close]

BLAST of Sed0026265 vs. ExPASy Swiss-Prot
Match: Q9LRW1 (LOB domain-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=LBD22 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 9.4e-23
Identity = 49/105 (46.67%), Postives = 70/105 (66.67%), Query Frame = 0


Query: 20  ACAACKFQRRKCSTDCPLAPYFPANRLQDFQNVRRLFGVKNVLKTLADVDPSERFAAAEC 79
           ACAACK+QRRKC+ DC LAPYFP +R + F N  +LFGV N+ K +  + P E+ AA   
Sbjct: 36  ACAACKYQRRKCAPDCLLAPYFPHDRHRQFLNAHKLFGVSNITKIIKSLTPPEKDAAMHT 95

Query: 80  MIFEANCRANDPAGGCYGVIASLQREIMLLEAQRQRLLLLLRIYR 125
           ++F+++ RANDP  GCYG+I  LQ +I     + + +L  L ++R
Sbjct: 96  IMFQSDARANDPVDGCYGIIKKLQYQIEYTRNELEIVLQQLAMFR 140

[Close]

BLAST of Sed0026265 vs. ExPASy Swiss-Prot
Match: Q9STS6 (LOB domain-containing protein 27 OS=Arabidopsis thaliana OX=3702 GN=LBD27 PE=1 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 4.0e-21
Identity = 48/107 (44.86%), Postives = 71/107 (66.36%), Query Frame = 0


Query: 18  TNACAACKFQRRKCSTDCPLAPYFPANRLQDFQNVRRLFGVKNVLKTLADVDPSERFAAA 77
           + ACAACK+QRR+C+ DCPLAPYFPA + + FQNV RLFGV++++K L  +D +++  A 
Sbjct: 34  SGACAACKYQRRRCAADCPLAPYFPAEQPKLFQNVHRLFGVRSIVKILEKLDETQKPEAM 93

Query: 78  ECMIFEANCRANDPAGGCYGVIASLQREIMLLEAQRQRLLLLLRIYR 125
           + +IF++  R   P  GC GV   LQ  I   E + + +   L++YR
Sbjct: 94  KSIIFQSYVRDRSPVHGCLGVTQQLQYMIWFAEEELKAVNSQLQLYR 140

[Close]

BLAST of Sed0026265 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.2e-20
Identity = 47/96 (48.96%), Postives = 63/96 (65.62%), Query Frame = 0


Query: 17  ATNACAACKFQRRKCSTDCPLAPYFPANRLQDFQNVRRLFGVKNVLKTLADVDPSERFAA 76
           A + CAACK  RR+C+ DC  +PYFPA+  Q F NV R+FG  NV K L ++   +R  A
Sbjct: 10  AASPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDA 69

Query: 77  AECMIFEANCRANDPAGGCYGVIASLQREIMLLEAQ 113
              M++EAN R  DP  GC G I+SLQ++I +L+AQ
Sbjct: 70  VSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQ 105

[Close]

BLAST of Sed0026265 vs. ExPASy Swiss-Prot
Match: Q8L8Q3 (LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 SV=3)

HSP 1 Score: 97.1 bits (240), Expect = 2.2e-19
Identity = 44/92 (47.83%), Postives = 57/92 (61.96%), Query Frame = 0


Query: 21  CAACKFQRRKCSTDCPLAPYFPANRLQDFQNVRRLFGVKNVLKTLADVDPSERFAAAECM 80
           CAACKF RRKC++DC  APYFP      F NV R+FG  NV K L +V P +R  A   +
Sbjct: 40  CAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQREDAVNSL 99

Query: 81  IFEANCRANDPAGGCYGVIASLQREIMLLEAQ 113
            +EA  R  DP  GC G I+ LQR+++ L+ +
Sbjct: 100 AYEAEARLKDPVYGCVGAISVLQRQVLRLQRE 131

[Close]

BLAST of Sed0026265 vs. ExPASy Swiss-Prot
Match: A2WXT0 (LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 PE=3 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.7e-19
Identity = 53/135 (39.26%), Postives = 71/135 (52.59%), Query Frame = 0


Query: 2   NSAAEPTGTPAVHFPATNACAACKFQRRKCSTDCPLAPYFPANRLQDFQNVRRLFGVKNV 61
           N+AA  TG+P         CAACKF RRKC  DC  APYFP +  Q F +V R+FG  NV
Sbjct: 29  NTAACGTGSP---------CAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNV 88

Query: 62  LKTLADVDPSERFAAAECMIFEANCRANDPAGGCYGVIASLQREIMLLEAQRQRLLLLLR 121
            K L ++ P +R  A   + +EA+ R  DP  GC  +I+ LQR +  L+    R    L 
Sbjct: 89  TKLLNELHPYQREDAVNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELS 148

Query: 122 IYRPATEESIGGGAA 137
            Y+ A   +    A+
Sbjct: 149 KYQQAAAAAAAASAS 154

[Close]

BLAST of Sed0026265 vs. ExPASy TrEMBL
Match: A0A6J1BR93 (LOB domain-containing protein 25-like OS=Momordica charantia OX=3673 GN=LOC111005046 PE=3 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 1.4e-37
Identity = 85/118 (72.03%), Postives = 94/118 (79.66%), Query Frame = 0


Query: 7   PTGTPAVHFPATNACAACKFQRRKCSTDCPLAPYFPANRLQDFQNVRRLFGVKNVLKTLA 66
           PT T A    A  ACAACKFQRRKCS DCPLAPYFPA+R ++FQNVRRLFGVKNVLKTL 
Sbjct: 22  PTETAAA-AAAAQACAACKFQRRKCSPDCPLAPYFPADRPKNFQNVRRLFGVKNVLKTLR 81

Query: 67  DVDPSERFAAAECMIFEANCRANDPAGGCYGVIASLQREIMLLEAQRQRLLLLLRIYR 125
           DV+PS R AAAECMIFEANCRA+D AGGCY +IA LQ EI  LEAQ+  +L  L I+R
Sbjct: 82  DVEPSNRAAAAECMIFEANCRADDLAGGCYKIIAELQSEITFLEAQQNLVLRQLCIFR 138

[Close]

BLAST of Sed0026265 vs. ExPASy TrEMBL
Match: A0A6J1K5C4 (LOB domain-containing protein 22-like OS=Cucurbita maxima OX=3661 GN=LOC111492440 PE=3 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 4.1e-37
Identity = 75/112 (66.96%), Postives = 93/112 (83.04%), Query Frame = 0


Query: 13  VHFPATNACAACKFQRRKCSTDCPLAPYFPANRLQDFQNVRRLFGVKNVLKTLADVDPSE 72
           ++ P   ACAACKFQRRKC+ DCPLAPYFPA+R ++F+NVR+LFGVKNVLKTL D++PS+
Sbjct: 21  LNLPTMQACAACKFQRRKCTADCPLAPYFPADRFREFRNVRKLFGVKNVLKTLGDLEPSK 80

Query: 73  RFAAAECMIFEANCRANDPAGGCYGVIASLQREIMLLEAQRQRLLLLLRIYR 125
           R  A +C+IFEANCRAND AGGCY +IA +QREI LLEAQ + +L  LR +R
Sbjct: 81  RRDAVQCIIFEANCRANDLAGGCYKIIAKMQREITLLEAQHRLVLRQLRFFR 132

[Close]

BLAST of Sed0026265 vs. ExPASy TrEMBL
Match: A0A6J1HFG0 (LOB domain-containing protein 22-like OS=Cucurbita moschata OX=3662 GN=LOC111462953 PE=3 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 1.6e-36
Identity = 75/109 (68.81%), Postives = 90/109 (82.57%), Query Frame = 0


Query: 16  PATNACAACKFQRRKCSTDCPLAPYFPANRLQDFQNVRRLFGVKNVLKTLADVDPSERFA 75
           P   ACAACKFQRRKC+ DCPLAPYFPA R ++F+NVR+LFGVKNVLKTL D++PS+R  
Sbjct: 24  PTMQACAACKFQRRKCTADCPLAPYFPAERFREFRNVRKLFGVKNVLKTLGDLEPSKRRD 83

Query: 76  AAECMIFEANCRANDPAGGCYGVIASLQREIMLLEAQRQRLLLLLRIYR 125
           A +C+IFEANCRA+D AGGCY +IA +QREI LLEAQ + +L  LR YR
Sbjct: 84  AVQCIIFEANCRASDLAGGCYKIIAKMQREITLLEAQHRLVLRQLRFYR 132

[Close]

BLAST of Sed0026265 vs. ExPASy TrEMBL
Match: A0A5A7V0Z4 (LOB domain-containing protein 22-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001350 PE=3 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 7.7e-36
Identity = 84/148 (56.76%), Postives = 100/148 (67.57%), Query Frame = 0


Query: 17  ATNACAACKFQRRKCSTDCPLAPYFPANRLQDFQNVRRLFGVKNVLKTLADVDPSERFAA 76
           A  ACAACKF RRKCS +CPLAPYFPANRL+DF+NVR+LFGVKNVLK LA ++P  RF A
Sbjct: 30  AAAACAACKFHRRKCSVECPLAPYFPANRLRDFENVRKLFGVKNVLKILAGLEPDNRFKA 89

Query: 77  AECMIFEANCRANDPAGGCYGVIASLQREIMLLEAQRQRLLLLLRIYRPATEESIGGGAA 136
            ECMIFEANCRA D AGGCY +I+ LQ EI LLEAQ + +L  L+I R         GA 
Sbjct: 90  VECMIFEANCRAIDLAGGCYKIISKLQSEIALLEAQHRLILHQLQISRQTAAAISQRGAI 149

Query: 137 GTEICGKENLCSSDLVGL---CESESDF 162
            +E    ++ C   L  L   C+   D+
Sbjct: 150 RSEF---DSDCKHGLTSLLLDCDCSEDW 174

[Close]

BLAST of Sed0026265 vs. ExPASy TrEMBL
Match: A0A1S3B9X0 (LOB domain-containing protein 22-like OS=Cucumis melo OX=3656 GN=LOC103487781 PE=3 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 7.7e-36
Identity = 84/148 (56.76%), Postives = 100/148 (67.57%), Query Frame = 0


Query: 17  ATNACAACKFQRRKCSTDCPLAPYFPANRLQDFQNVRRLFGVKNVLKTLADVDPSERFAA 76
           A  ACAACKF RRKCS +CPLAPYFPANRL+DF+NVR+LFGVKNVLK LA ++P  RF A
Sbjct: 30  AAAACAACKFHRRKCSVECPLAPYFPANRLRDFENVRKLFGVKNVLKILAGLEPDNRFKA 89

Query: 77  AECMIFEANCRANDPAGGCYGVIASLQREIMLLEAQRQRLLLLLRIYRPATEESIGGGAA 136
            ECMIFEANCRA D AGGCY +I+ LQ EI LLEAQ + +L  L+I R         GA 
Sbjct: 90  VECMIFEANCRAIDLAGGCYKIISKLQSEIALLEAQHRLILHQLQISRQTAAAISQRGAI 149

Query: 137 GTEICGKENLCSSDLVGL---CESESDF 162
            +E    ++ C   L  L   C+   D+
Sbjct: 150 RSEF---DSDCKHGLTSLLLDCDCSEDW 174

[Close]

BLAST of Sed0026265 vs. TAIR 10
Match: AT3G13850.1 (LOB domain-containing protein 22 )

HSP 1 Score: 108.2 bits (269), Expect = 6.7e-24
Identity = 49/105 (46.67%), Postives = 70/105 (66.67%), Query Frame = 0


Query: 20  ACAACKFQRRKCSTDCPLAPYFPANRLQDFQNVRRLFGVKNVLKTLADVDPSERFAAAEC 79
           ACAACK+QRRKC+ DC LAPYFP +R + F N  +LFGV N+ K +  + P E+ AA   
Sbjct: 36  ACAACKYQRRKCAPDCLLAPYFPHDRHRQFLNAHKLFGVSNITKIIKSLTPPEKDAAMHT 95

Query: 80  MIFEANCRANDPAGGCYGVIASLQREIMLLEAQRQRLLLLLRIYR 125
           ++F+++ RANDP  GCYG+I  LQ +I     + + +L  L ++R
Sbjct: 96  IMFQSDARANDPVDGCYGIIKKLQYQIEYTRNELEIVLQQLAMFR 140

[Close]

BLAST of Sed0026265 vs. TAIR 10
Match: AT3G47870.1 (LOB domain-containing protein 27 )

HSP 1 Score: 102.8 bits (255), Expect = 2.8e-22
Identity = 48/107 (44.86%), Postives = 71/107 (66.36%), Query Frame = 0


Query: 18  TNACAACKFQRRKCSTDCPLAPYFPANRLQDFQNVRRLFGVKNVLKTLADVDPSERFAAA 77
           + ACAACK+QRR+C+ DCPLAPYFPA + + FQNV RLFGV++++K L  +D +++  A 
Sbjct: 34  SGACAACKYQRRRCAADCPLAPYFPAEQPKLFQNVHRLFGVRSIVKILEKLDETQKPEAM 93

Query: 78  ECMIFEANCRANDPAGGCYGVIASLQREIMLLEAQRQRLLLLLRIYR 125
           + +IF++  R   P  GC GV   LQ  I   E + + +   L++YR
Sbjct: 94  KSIIFQSYVRDRSPVHGCLGVTQQLQYMIWFAEEELKAVNSQLQLYR 140

[Close]

BLAST of Sed0026265 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 )

HSP 1 Score: 101.3 bits (251), Expect = 8.2e-22
Identity = 47/96 (48.96%), Postives = 63/96 (65.62%), Query Frame = 0


Query: 17  ATNACAACKFQRRKCSTDCPLAPYFPANRLQDFQNVRRLFGVKNVLKTLADVDPSERFAA 76
           A + CAACK  RR+C+ DC  +PYFPA+  Q F NV R+FG  NV K L ++   +R  A
Sbjct: 10  AASPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDA 69

Query: 77  AECMIFEANCRANDPAGGCYGVIASLQREIMLLEAQ 113
              M++EAN R  DP  GC G I+SLQ++I +L+AQ
Sbjct: 70  VSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQ 105

[Close]

BLAST of Sed0026265 vs. TAIR 10
Match: AT3G27650.1 (LOB domain-containing protein 25 )

HSP 1 Score: 97.1 bits (240), Expect = 1.5e-20
Identity = 44/92 (47.83%), Postives = 57/92 (61.96%), Query Frame = 0


Query: 21  CAACKFQRRKCSTDCPLAPYFPANRLQDFQNVRRLFGVKNVLKTLADVDPSERFAAAECM 80
           CAACKF RRKC++DC  APYFP      F NV R+FG  NV K L +V P +R  A   +
Sbjct: 40  CAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQREDAVNSL 99

Query: 81  IFEANCRANDPAGGCYGVIASLQREIMLLEAQ 113
            +EA  R  DP  GC G I+ LQR+++ L+ +
Sbjct: 100 AYEAEARLKDPVYGCVGAISVLQRQVLRLQRE 131

[Close]

BLAST of Sed0026265 vs. TAIR 10
Match: AT1G65620.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 95.9 bits (237), Expect = 3.4e-20
Identity = 55/133 (41.35%), Postives = 75/133 (56.39%), Query Frame = 0


Query: 17  ATNA-CAACKFQRRKCSTDCPLAPYFPANRLQDFQNVRRLFGVKNVLKTLADVDPSERFA 76
           +TN+ CAACKF RRKC  +C  APYFP ++ Q F NV ++FG  NV K L ++ PS+R  
Sbjct: 5   STNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQRED 64

Query: 77  AAECMIFEANCRANDPAGGCYGVIASLQREIMLLEAQRQRLLLLLRIYR-----PATEES 136
           A   + +EA+ R  DP  GC GVI+ LQ ++  L+         L  Y+      AT +S
Sbjct: 65  AVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSLGILAATHQS 124

Query: 137 IG-----GGAAGT 139
           +G     G A GT
Sbjct: 125 LGINLLAGAADGT 137

The following BLAST results are available for this feature:

BLAST of Sed0026265 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886742.1	4.8e-40	72.03	LOB domain-containing protein 22-like [Benincasa hispida]	[more]
XP_022132086.1	2.9e-37	72.03	LOB domain-containing protein 25-like [Momordica charantia]	[more]
XP_022997547.1	8.5e-37	66.96	LOB domain-containing protein 22-like [Cucurbita maxima]	[more]
XP_022962555.1	3.2e-36	68.81	LOB domain-containing protein 22-like [Cucurbita moschata]	[more]
KAG7029263.1	3.2e-36	68.81	LOB domain-containing protein 22, partial [Cucurbita argyrosperma subsp. argyros...	[more]

BLAST of Sed0026265 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LRW1	9.4e-23	46.67	LOB domain-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=LBD22 PE=2 S...	[more]
Q9STS6	4.0e-21	44.86	LOB domain-containing protein 27 OS=Arabidopsis thaliana OX=3702 GN=LBD27 PE=1 S...	[more]
Q9SHE9	1.2e-20	48.96	LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=...	[more]
Q8L8Q3	2.2e-19	47.83	LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 S...	[more]
A2WXT0	3.7e-19	39.26	LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 P...	[more]

BLAST of Sed0026265 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BR93	1.4e-37	72.03	LOB domain-containing protein 25-like OS=Momordica charantia OX=3673 GN=LOC11100...	[more]
A0A6J1K5C4	4.1e-37	66.96	LOB domain-containing protein 22-like OS=Cucurbita maxima OX=3661 GN=LOC11149244...	[more]
A0A6J1HFG0	1.6e-36	68.81	LOB domain-containing protein 22-like OS=Cucurbita moschata OX=3662 GN=LOC111462...	[more]
A0A5A7V0Z4	7.7e-36	56.76	LOB domain-containing protein 22-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3B9X0	7.7e-36	56.76	LOB domain-containing protein 22-like OS=Cucumis melo OX=3656 GN=LOC103487781 PE...	[more]

BLAST of Sed0026265 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G13850.1	6.7e-24	46.67	LOB domain-containing protein 22	[more]
AT3G47870.1	2.8e-22	44.86	LOB domain-containing protein 27	[more]
AT1G31320.1	8.2e-22	48.96	LOB domain-containing protein 4	[more]
AT3G27650.1	1.5e-20	47.83	LOB domain-containing protein 25	[more]
AT1G65620.1	3.4e-20	41.35	Lateral organ boundaries (LOB) domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 99..119
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 17..127
None	No IPR available	PANTHER	PTHR31301:SF21	LOB DOMAIN-CONTAINING PROTEIN 27-RELATED	coord: 17..127
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 20..114 e-value: 2.5E-34 score: 117.8
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 19..120 score: 23.206312

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0026265.1	Sed0026265.1	mRNA