Sed0026249 (gene) Chayote v1

Overview


Name	Sed0026249
Type	gene
Organism	Sechium edule (Chayote v1)
Description	F-box protein PP2-B10-like
Location	LG08: 28053749 .. 28055040 (-)
RNA-Seq Expression	Sed0026249
Synteny	Sed0026249

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAATGGAAGAAGAAACGGAAGTTTGCAATTTCTCTTCTCAGAAGGAGTAATAGCACATATCTTGTCGCTCGTGACCCCATTCCATATCTGCACGACGTCCGCCGTTTCCCGTATTTTCCACTCGGCGGCTCGGTCAGACGCTGTGTGGAACAGATTCTTGCCCACCAATTTGGACGATGGCTTACATTTTGATCCAATTTCTACTCGGAAGAAGAATATCTTTTTCTCTCTTTGCCAACACCCACTGCTAGTTGAAAACGGCAACATGGTAAGTTTCCAATTCCCCCATTTGGACCATTCCTGTATGTTCTTTTTCTTTGTAATCTTTACCTTATATTTTCATATTAGAATCTTTAGATTTTGCCTTTCTTGTGAATGAATCTTGGATTCCAACATTACCTTAAATCAAATGCTTTAACCTTGTACTTAATTAACCTTTACATTGAGTTCAGAGTACAAATTTGAGGCCCAGACCATTATGTTTTTGCAAATACTTAAGTATAAACATATGCTTAAATCAGTCTGTTTCATTTGTTAATCTTATATCACCTGTTGAATCAACAATGAAACTATTTTACACTTTCTTTTTGTATGGACATAAAAGCGAGTTGGTTCAATTTGGCATGTTGTAGTTATTAGCATTGAAGAAACGAAGTGGTAGGAAATGCATAATTCTTGGAGCAAGGAGCCTCACCATTGTTTGGGGTGCTACCTCTCACCACTGGACCTGGGAACATCATCCGAAATCGAGGTTTAGGCAAATCGAACCTCGTCTATATTTAATTCCCTTTCCAAACCTAAAGTCGTCTTGTTAAATCAGGTTTTCAAAGGTGGCTGTACTCCAAATGGTCGGGTGGCTTGAAATCCGAGGAAGTGTAAGTTGCAGAATACTGTCTCCTAGAACAACTTACGGAGTTTACTTTGTGTTCAAGATGAAGAAACGTGTACATGAAGGGTTCAATGATCATCCTTGTGAGGCCATGGTGGGGATTGTTGGCACTCAAAGCCATACCAAGAGTATTTGTTTGGACCCTTTTATCCACATCAGGAAACCAGGTTGGCCGTGTTCATCATTGTTCCGGCCTCCACCCAAAAACATGTCGGAGTTCGAGCAGCCAACAAAGAGACCGGATGGTTGGTTTGAAATTGAGTTGGGAGAGTTTCATAGTGGCGATGGAGATGATGAAATTGAGATGACTCTTATGGATGTGAATGGGATTAAGAATGGGCTTGTTGTAGAAGGGATTGTGATTAGGCCTAAACCCAGCTCTGTTGTTGGAGACATTTGA

mRNA sequence

ATGCAATGGAAGAAGAAACGGAAGTTTGCAATTTCTCTTCTCAGAAGGAGTAATAGCACATATCTTGTCGCTCGTGACCCCATTCCATATCTGCACGACGTCCGCCGTTTCCCGTATTTTCCACTCGGCGGCTCGTTATTAGCATTGAAGAAACGAAGTGGTAGGAAATGCATAATTCTTGGAGCAAGGAGCCTCACCATTGTTTGGGGTGCTACCTCTCACCACTGGACCTGGGAACATCATCCGAAATCGAGGTTTTCAAAGGTGGCTGTACTCCAAATGGTCGGGTGGCTTGAAATCCGAGGAAGTGTAAGTTGCAGAATACTGTCTCCTAGAACAACTTACGGAGTTTACTTTGTGTTCAAGATGAAGAAACGTGTACATGAAGGGTTCAATGATCATCCTTGTGAGGCCATGGTGGGGATTGTTGGCACTCAAAGCCATACCAAGAGTATTTGTTTGGACCCTTTTATCCACATCAGGAAACCAGGTTGGCCGTGTTCATCATTGTTCCGGCCTCCACCCAAAAACATGTCGGAGTTCGAGCAGCCAACAAAGAGACCGGATGGTTGGTTTGAAATTGAGTTGGGAGAGTTTCATAGTGGCGATGGAGATGATGAAATTGAGATGACTCTTATGGATGTGAATGGGATTAAGAATGGGCTTGTTGTAGAAGGGATTGTGATTAGGCCTAAACCCAGCTCTGTTGTTGGAGACATTTGA

Coding sequence (CDS)

ATGCAATGGAAGAAGAAACGGAAGTTTGCAATTTCTCTTCTCAGAAGGAGTAATAGCACATATCTTGTCGCTCGTGACCCCATTCCATATCTGCACGACGTCCGCCGTTTCCCGTATTTTCCACTCGGCGGCTCGTTATTAGCATTGAAGAAACGAAGTGGTAGGAAATGCATAATTCTTGGAGCAAGGAGCCTCACCATTGTTTGGGGTGCTACCTCTCACCACTGGACCTGGGAACATCATCCGAAATCGAGGTTTTCAAAGGTGGCTGTACTCCAAATGGTCGGGTGGCTTGAAATCCGAGGAAGTGTAAGTTGCAGAATACTGTCTCCTAGAACAACTTACGGAGTTTACTTTGTGTTCAAGATGAAGAAACGTGTACATGAAGGGTTCAATGATCATCCTTGTGAGGCCATGGTGGGGATTGTTGGCACTCAAAGCCATACCAAGAGTATTTGTTTGGACCCTTTTATCCACATCAGGAAACCAGGTTGGCCGTGTTCATCATTGTTCCGGCCTCCACCCAAAAACATGTCGGAGTTCGAGCAGCCAACAAAGAGACCGGATGGTTGGTTTGAAATTGAGTTGGGAGAGTTTCATAGTGGCGATGGAGATGATGAAATTGAGATGACTCTTATGGATGTGAATGGGATTAAGAATGGGCTTGTTGTAGAAGGGATTGTGATTAGGCCTAAACCCAGCTCTGTTGTTGGAGACATTTGA

Protein sequence

MQWKKKRKFAISLLRRSNSTYLVARDPIPYLHDVRRFPYFPLGGSLLALKKRSGRKCIILGARSLTIVWGATSHHWTWEHHPKSRFSKVAVLQMVGWLEIRGSVSCRILSPRTTYGVYFVFKMKKRVHEGFNDHPCEAMVGIVGTQSHTKSICLDPFIHIRKPGWPCSSLFRPPPKNMSEFEQPTKRPDGWFEIELGEFHSGDGDDEIEMTLMDVNGIKNGLVVEGIVIRPKPSSVVGDI

Homology

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BLAST of Sed0026249 vs. NCBI nr
Match: XP_038878468.1 (F-box protein PP2-B10-like [Benincasa hispida])

HSP 1 Score: 245.7 bits (626), Expect = 3.9e-61
Identity = 119/202 (58.91%), Postives = 150/202 (74.26%), Query Frame = 0


Query: 43  GGSLLALKKRSGRKCIILGARSLTIVWGATSHHWTWEHHPKSRFSKVAVLQMVGWLEIRG 102
           G   L+L+K SG+KCI+LGAR L+IVWG TS++W+WEHH  SRF++VAVL  V WLEIRG
Sbjct: 104 GNKSLSLEKWSGKKCIMLGARDLSIVWGDTSYYWSWEHHTDSRFAEVAVLLDVWWLEIRG 163

Query: 103 SVSCRILSPRTTYGVYFVFKMKKRVHEGFNDHPCEAMVGIVGTQSHTKSICLDPFI---- 162
            +SCR+LSP+TTY  YFVFKM++R + GFN +P +A VGI+GT+ H KS+CLDP++    
Sbjct: 164 RISCRMLSPKTTYAAYFVFKMRQRRYYGFNINPADATVGILGTEPHRKSVCLDPYLDNPQ 223

Query: 163 -HIRKPGWPCSSLFRPPPKNMSEFEQPTKRPDGWFEIELGEFHSGDGDDEIEMTLMDVNG 222
              R   W    + RP  ++M+  E P +R DGWFEIELGEF SGDGDDE+EM LM+V G
Sbjct: 224 RRRRHAPW----MMRPQSEDMAGLEWPPERHDGWFEIELGEFESGDGDDEVEMALMEVKG 283

Query: 223 --IKNGLVVEGIVIRPKPSSVV 238
              K+GLVVEGI IRPKPS  V
Sbjct: 284 SSAKSGLVVEGIEIRPKPSRPV 301

[Close]

BLAST of Sed0026249 vs. NCBI nr
Match: XP_023001982.1 (F-box protein PP2-B10-like [Cucurbita maxima])

HSP 1 Score: 237.3 bits (604), Expect = 1.4e-58
Identity = 119/200 (59.50%), Postives = 143/200 (71.50%), Query Frame = 0


Query: 43  GGSLLALKKRSGRKCIILGARSLTIVWGATSHHWTWEHHPKSRFSKVAVLQMVGWLEIRG 102
           G   LAL+K +GRKCI+LGAR++TIVW  T  +WTWEHHP SRF++VAVL  V WLEIRG
Sbjct: 94  GDKSLALEKWTGRKCIMLGARNITIVWSDTPEYWTWEHHPDSRFAEVAVLLQVWWLEIRG 153

Query: 103 SVSCRILSPRTTYGVYFVFKMKKRVHEGFNDHPCEAMVGIVGTQSHTKSICLDPFI---H 162
            +SCRIL+ RTTYGVY VFKM +  + GFN  P E   GI+GT+S  K++CLDP +   H
Sbjct: 154 RMSCRILTRRTTYGVYLVFKMNEDEYRGFNFDPAEVRAGILGTESDPKTVCLDPDLENSH 213

Query: 163 IRKPGWPCSSLFRPPPKNMSEFEQPTKRPDGWFEIELGEFHSGDGDDEIEMTLMDVNG-- 222
           +R   W    L     +  S  EQP +R DGWFEIELGEF SGDGDDE+EM LM+V G  
Sbjct: 214 LRLAPW----LMDHSLEMSSGLEQPKERQDGWFEIELGEFESGDGDDEVEMDLMEVKGGT 273

Query: 223 IKNGLVVEGIVIRPKPSSVV 238
            K GLVVEGI IRPKP+SV+
Sbjct: 274 RKTGLVVEGIEIRPKPTSVL 289

[Close]

BLAST of Sed0026249 vs. NCBI nr
Match: XP_022135496.1 (F-box protein PP2-B10-like [Momordica charantia])

HSP 1 Score: 233.0 bits (593), Expect = 2.6e-57
Identity = 117/197 (59.39%), Postives = 144/197 (73.10%), Query Frame = 0


Query: 43  GGSLLALKKRSGRKCIILGARSLTIVWGATSHHWTWEHHPKSRFSKVAVLQMVGWLEIRG 102
           G    +L KRSG+KCI+LGAR L++VWG TS +WTWE HP+SRF++VAVL  V WLEIRG
Sbjct: 109 GKKSFSLDKRSGKKCIMLGARDLSVVWGDTSFYWTWERHPESRFAEVAVLLEVWWLEIRG 168

Query: 103 SVSCRILSPRTTYGVYFVFKMKKRVHEGFNDHPCEAMVGIVGTQSHTKSICLDPFIH--- 162
            +SCR+LSP TTY  YFVFKM+KR + GFN  P +AMVG  GT++ +KS+CLDPFI    
Sbjct: 169 RISCRMLSPATTYAAYFVFKMRKRRYYGFNVDPADAMVGTGGTENRSKSVCLDPFIDNPL 228

Query: 163 IRKPGWPCSSLFRPPPKNMSEFEQPTKRPDGWFEIELGEFHSGDGDDEIEMTLMDVNG-- 222
            R+   P +     PP++M   E+P +R DGWFEIELGEF S  GDDEIEM LM+V G  
Sbjct: 229 RRRRHVPLA--VDQPPESMEGSERPKQRHDGWFEIELGEFQSDSGDDEIEMVLMEVKGNT 288

Query: 223 IKNGLVVEGIVIRPKPS 235
            K+GLVV+GI IRPK S
Sbjct: 289 PKSGLVVQGIEIRPKIS 303

[Close]

BLAST of Sed0026249 vs. NCBI nr
Match: XP_038880064.1 (F-box protein PP2-B10-like [Benincasa hispida])

HSP 1 Score: 232.3 bits (591), Expect = 4.5e-57
Identity = 113/202 (55.94%), Postives = 147/202 (72.77%), Query Frame = 0


Query: 43  GGSLLALKKRSGRKCIILGARSLTIVWGATSHHWTWEHHPKSRFSKVAVLQMVGWLEIRG 102
           G   L+L+K SG+K I+LGAR L++VWG TS +WTWEH  +SRF++VAVL  V WLEIRG
Sbjct: 105 GNKSLSLEKWSGKKRIMLGARDLSVVWGDTSGYWTWEHRLESRFAEVAVLVNVWWLEIRG 164

Query: 103 SVSCRILSPRTTYGVYFVFKMKKRVHEGFNDHPCEAMVGIVGTQSHTKSICLDPFI---- 162
            +SCR+LSP+TTY VYFVF M++  + GF+  P +A VGI+GT++H +S+CLDP++    
Sbjct: 165 RISCRMLSPKTTYAVYFVFNMRRCYYYGFDIDPADATVGILGTENHRRSVCLDPYLDNPQ 224

Query: 163 -HIRKPGWPCSSLFRPPPKNMSEFEQPTKRPDGWFEIELGEFHSGDGDDEIEMTLMDVNG 222
              R   W    + RP  + MS  E+P KR DGWFEIELGEF SGDGDDE+EM L ++ G
Sbjct: 225 GRRRHAPW----MMRPQSEGMSGLERPQKRHDGWFEIELGEFESGDGDDEVEMALKELKG 284

Query: 223 I--KNGLVVEGIVIRPKPSSVV 238
              K+GLVVEGI IRPKPS ++
Sbjct: 285 SSDKSGLVVEGIEIRPKPSHLL 302

[Close]

BLAST of Sed0026249 vs. NCBI nr
Match: XP_022929417.1 (F-box protein PP2-B10-like [Cucurbita moschata])

HSP 1 Score: 231.9 bits (590), Expect = 5.9e-57
Identity = 118/200 (59.00%), Postives = 142/200 (71.00%), Query Frame = 0


Query: 43  GGSLLALKKRSGRKCIILGARSLTIVWGATSHHWTWEHHPKSRFSKVAVLQMVGWLEIRG 102
           G   LAL+K +GRKCI+LGAR++TIVW  T  +WTWEHHP SRF++VAVL  V WLEIRG
Sbjct: 98  GDKSLALEKWTGRKCIMLGARNITIVWSDTPEYWTWEHHPDSRFAEVAVLLQVWWLEIRG 157

Query: 103 SVSCRILSPRTTYGVYFVFKMKKRVHEGFNDHPCEAMVGIVGTQSHTKSICLDPFI---H 162
            +SCRIL+ RTTYGVY VFKM +  + GFN    E   GI+GT+S  K++CLDP +    
Sbjct: 158 RMSCRILTRRTTYGVYLVFKMNEDEYRGFNFDLAEVRAGILGTESDPKTVCLDPDLENSR 217

Query: 163 IRKPGWPCSSLFRPPPKNMSEFEQPTKRPDGWFEIELGEFHSGDGDDEIEMTLMDVNG-- 222
           +R   W    L     +  SE EQP +R DGWFEIELGEF SGDGDDE+EM LM+V G  
Sbjct: 218 LRLAPW----LIDHSLEMSSELEQPKERQDGWFEIELGEFESGDGDDEVEMDLMEVKGGT 277

Query: 223 IKNGLVVEGIVIRPKPSSVV 238
            K GLVVEGI IRPKP+SV+
Sbjct: 278 RKIGLVVEGIEIRPKPTSVL 293

[Close]

BLAST of Sed0026249 vs. ExPASy Swiss-Prot
Match: Q9ZVQ6 (F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 5.2e-32
Identity = 75/188 (39.89%), Postives = 106/188 (56.38%), Query Frame = 0


Query: 49  LKKRSGRKCIILGARSLTIVWGATSHHWTWEHHPKSRFSKVAVLQMVGWLEIRGSVSCRI 108
           L+K SG++C++L A +L+I+WG    +W W   P+SRF KVA L+ V W EIRG  + R+
Sbjct: 98  LEKASGKRCLMLSAMNLSIIWGDNPQYWQWIPIPESRFEKVAKLRDVCWFEIRGRTNTRV 157

Query: 109 LSPRTTYGVYFVFKMKKRVHEGFNDHPCEAMVGIVGTQSHTKSICLDPFIHIRKPGWPCS 168
           LSPRT Y  Y VFK   + + GF +   EA VG+VG +   + IC    I          
Sbjct: 158 LSPRTRYSAYIVFKGVDKCY-GFQNVAIEAAVGVVGQEPSRRLICFSEAIR--------- 217

Query: 169 SLFRPPPKNMSEFEQPTKRPDGWFEIELGEFHSGDG---DDEIEMTLMDVNGI--KNGLV 228
                  +      +P +R DGW EIELGEF +  G   +DEIEM+ ++   +  K GL+
Sbjct: 218 -------RGRRNVVKPKQREDGWMEIELGEFFNDGGIMDNDEIEMSALETKQLNRKCGLI 268

Query: 229 VEGIVIRP 232
           ++GI IRP
Sbjct: 278 IQGIEIRP 268

[Close]

BLAST of Sed0026249 vs. ExPASy Swiss-Prot
Match: Q3E6P4 (F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.3e-30
Identity = 73/188 (38.83%), Postives = 106/188 (56.38%), Query Frame = 0


Query: 49  LKKRSGRKCIILGARSLTIVWGATSHHWTWEHHPKSRFSKVAVLQMVGWLEIRGSVSCRI 108
           L+K SG++CI+L ++ L I WG++  +W W   P+SRF+K+A L  V W EIRG  S R+
Sbjct: 145 LEKASGKRCIMLSSKELWITWGSSPEYWQWISIPESRFNKIAELLDVCWFEIRGKTSARV 204

Query: 109 LSPRTTYGVYFVFKMKKRVHEGFNDHPCEAMVGIVGTQSHTKSICLDPFIHIRKPGWPCS 168
           LSP T Y  Y VFK K R   G    P E  +G+VG +S  +      FI+   P     
Sbjct: 205 LSPGTRYSAYIVFKTKDRC-PGLGHLPVEVGLGLVGQESSKR------FIYFIGP----- 264

Query: 169 SLFRPPPKNMSEFEQPTKRPDGWFEIELGEFHSGDGDDEIEMTLMDVN--GIKNGLVVEG 228
              R   +   +  +P +R DGW E ELGEF + +  DEIE +++++     K+GL+++G
Sbjct: 265 -RDRRGRRETRDVTKPDQREDGWMEAELGEFFNEERCDEIEFSVIEIKSPSWKSGLIIQG 319

Query: 229 IVIRPKPS 235
           I  RP  S
Sbjct: 325 IEFRPTKS 319

[Close]

BLAST of Sed0026249 vs. ExPASy Swiss-Prot
Match: Q6NPT8 (F-box protein PP2-B1 OS=Arabidopsis thaliana OX=3702 GN=PP2B1 PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 4.1e-29
Identity = 82/221 (37.10%), Postives = 117/221 (52.94%), Query Frame = 0


Query: 49  LKKRSGRKCIILGARSLTIVWGATSHHWTWEHHPKSRFSKVAVLQMVGWLEIRGSVSCRI 108
           ++K SG+KC +L A  LTI+WG +  +W W   P+S+F KVA L+ V W E+RG +SC +
Sbjct: 116 VEKASGKKCYMLSAMELTIIWGDSPAYWKWITVPESKFEKVAELRNVCWFEVRGKISCGM 175

Query: 109 LSPRTTYGVYFVFKMKKRVHEGFNDHPCEAMVGIVGTQSHTKSICLD--------PFIHI 168
           LS  T Y VY VFK       GF+  P EA VG VG  +  KS+  +           H 
Sbjct: 176 LSKGTHYSVYVVFKTANGRSYGFDLVPVEAGVGFVGKVATKKSVYFESGNADSRSATSHY 235

Query: 169 RKPGWPCSS----LFRPPPKNMSEFEQ--------------PTKRPDGWFEIELGEFH-- 228
               +   S    + RP  +   E E+              P +R DGW E+ELG+F+  
Sbjct: 236 SGISYAMVSRAFRMRRPWMQVQREEEEEVEGERERGMNVVGPKERVDGWSEVELGKFYIN 295

Query: 229 ----SGDGDDEIEMTLMDV-NG-IKNGLVVEGIVIRPKPSS 236
                 DG DEIE+++M+  NG  K+GL+++GI IRP+ S+
Sbjct: 296 NGGCGDDGSDEIEISIMETQNGNWKSGLIIQGIEIRPERSN 336

[Close]

BLAST of Sed0026249 vs. ExPASy Swiss-Prot
Match: Q949S5 (F-box protein PP2-B11 OS=Arabidopsis thaliana OX=3702 GN=PP2B11 PE=1 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 7.8e-28
Identity = 76/197 (38.58%), Postives = 106/197 (53.81%), Query Frame = 0


Query: 42  LGGSLL--ALKKRSGRKCIILGARSLTIVWGATSHHWTWEHHPKSRFSKVAVLQMVGWLE 101
           + G+LL  +L+++SG KC ++ AR+L IVWG    +W W   P +RF +VA L MV WLE
Sbjct: 76  INGTLLSFSLERKSGNKCYMMAARALNIVWGHEQRYWHWISLPNTRFGEVAELIMVWWLE 135

Query: 102 IRGSVSCRILSPRTTYGVYFVFKMKKRVHEGFNDHPCEAMVGIVGTQSHTKSICLDPFIH 161
           I G ++  +LS  T Y  YFVFK     + GF   P E  + +  T+S T ++     I 
Sbjct: 136 ITGKINITLLSDDTLYAAYFVFKWNHSPY-GFR-QPVETSLVLADTES-TDNVVQPSMIS 195

Query: 162 IRKPGWPCSSLFRPPPKNMSEFEQPTKRPDGWFEIELGEFHSGDGD-DEIEMTLMDVNG- 221
           + +                 E + P  R DGW+E+ELG+F    GD  EIEM+L +  G 
Sbjct: 196 LMQ------------DSGGEEGQSPVLRRDGWYEVELGQFFKRRGDLGEIEMSLKETKGP 255

Query: 222 -IKNGLVVEGIVIRPKP 234
             K GL+V GI IRP P
Sbjct: 256 YEKKGLIVYGIEIRPVP 257

[Close]

BLAST of Sed0026249 vs. ExPASy Swiss-Prot
Match: O80494 (F-box protein PP2-B15 OS=Arabidopsis thaliana OX=3702 GN=PP2B15 PE=2 SV=2)

HSP 1 Score: 124.8 bits (312), Expect = 1.3e-27
Identity = 76/211 (36.02%), Postives = 105/211 (49.76%), Query Frame = 0


Query: 43  GGSLLALKKRSGRKCIILGARSLTIVWGATSHHWTWEHHPKSRFSKVAVLQMVGWLEIRG 102
           G  +  ++K SG+   IL +R L+I W    H+W+W     SRFS+   L M  WLEI G
Sbjct: 81  GRKIFKIEKLSGKISYILSSRDLSITWSDQRHYWSWSPRSDSRFSEGVQLIMTDWLEIIG 140

Query: 103 SVSCRILSPRTTYGVYFVFKMKKRVHEGFNDHPCEAMVGIVGTQSHTKSI---CLD---- 162
            +    LSP T YG Y + K+  R + G +  P E  + +   +   KS    CLD    
Sbjct: 141 KIQTGALSPNTNYGAYLIMKVTSRAY-GLDLVPAETSIKVGNGEKKIKSTYLSCLDNKKQ 200

Query: 163 ----PFIHIRKPGWPCSSLFRPPPKNMSEFEQPTKRPDGWFEIELGEFH--SGDGDD--E 222
                F   R+       + R      S   +P  R DGW EIELGEF   SG+GDD  E
Sbjct: 201 QMERVFYGQREQRMATHEVVR------SHRREPEVRDDGWMEIELGEFETGSGEGDDDKE 260

Query: 223 IEMTLMDVNG--IKNGLVVEGIVIRPKPSSV 237
           + M+L +V G  +K G+ ++GI +RPKP  V
Sbjct: 261 VVMSLTEVKGYQLKGGIAIDGIEVRPKPLKV 284

[Close]

BLAST of Sed0026249 vs. ExPASy TrEMBL
Match: A0A6J1KI64 (F-box protein PP2-B10-like OS=Cucurbita maxima OX=3661 GN=LOC111495996 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 6.8e-59
Identity = 119/200 (59.50%), Postives = 143/200 (71.50%), Query Frame = 0


Query: 43  GGSLLALKKRSGRKCIILGARSLTIVWGATSHHWTWEHHPKSRFSKVAVLQMVGWLEIRG 102
           G   LAL+K +GRKCI+LGAR++TIVW  T  +WTWEHHP SRF++VAVL  V WLEIRG
Sbjct: 94  GDKSLALEKWTGRKCIMLGARNITIVWSDTPEYWTWEHHPDSRFAEVAVLLQVWWLEIRG 153

Query: 103 SVSCRILSPRTTYGVYFVFKMKKRVHEGFNDHPCEAMVGIVGTQSHTKSICLDPFI---H 162
            +SCRIL+ RTTYGVY VFKM +  + GFN  P E   GI+GT+S  K++CLDP +   H
Sbjct: 154 RMSCRILTRRTTYGVYLVFKMNEDEYRGFNFDPAEVRAGILGTESDPKTVCLDPDLENSH 213

Query: 163 IRKPGWPCSSLFRPPPKNMSEFEQPTKRPDGWFEIELGEFHSGDGDDEIEMTLMDVNG-- 222
           +R   W    L     +  S  EQP +R DGWFEIELGEF SGDGDDE+EM LM+V G  
Sbjct: 214 LRLAPW----LMDHSLEMSSGLEQPKERQDGWFEIELGEFESGDGDDEVEMDLMEVKGGT 273

Query: 223 IKNGLVVEGIVIRPKPSSVV 238
            K GLVVEGI IRPKP+SV+
Sbjct: 274 RKTGLVVEGIEIRPKPTSVL 289

[Close]

BLAST of Sed0026249 vs. ExPASy TrEMBL
Match: A0A6J1C0X7 (F-box protein PP2-B10-like OS=Momordica charantia OX=3673 GN=LOC111007437 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 1.3e-57
Identity = 117/197 (59.39%), Postives = 144/197 (73.10%), Query Frame = 0


Query: 43  GGSLLALKKRSGRKCIILGARSLTIVWGATSHHWTWEHHPKSRFSKVAVLQMVGWLEIRG 102
           G    +L KRSG+KCI+LGAR L++VWG TS +WTWE HP+SRF++VAVL  V WLEIRG
Sbjct: 109 GKKSFSLDKRSGKKCIMLGARDLSVVWGDTSFYWTWERHPESRFAEVAVLLEVWWLEIRG 168

Query: 103 SVSCRILSPRTTYGVYFVFKMKKRVHEGFNDHPCEAMVGIVGTQSHTKSICLDPFIH--- 162
            +SCR+LSP TTY  YFVFKM+KR + GFN  P +AMVG  GT++ +KS+CLDPFI    
Sbjct: 169 RISCRMLSPATTYAAYFVFKMRKRRYYGFNVDPADAMVGTGGTENRSKSVCLDPFIDNPL 228

Query: 163 IRKPGWPCSSLFRPPPKNMSEFEQPTKRPDGWFEIELGEFHSGDGDDEIEMTLMDVNG-- 222
            R+   P +     PP++M   E+P +R DGWFEIELGEF S  GDDEIEM LM+V G  
Sbjct: 229 RRRRHVPLA--VDQPPESMEGSERPKQRHDGWFEIELGEFQSDSGDDEIEMVLMEVKGNT 288

Query: 223 IKNGLVVEGIVIRPKPS 235
            K+GLVV+GI IRPK S
Sbjct: 289 PKSGLVVQGIEIRPKIS 303

[Close]

BLAST of Sed0026249 vs. ExPASy TrEMBL
Match: A0A6J1EMR0 (F-box protein PP2-B10-like OS=Cucurbita moschata OX=3662 GN=LOC111435991 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 2.9e-57
Identity = 118/200 (59.00%), Postives = 142/200 (71.00%), Query Frame = 0


Query: 43  GGSLLALKKRSGRKCIILGARSLTIVWGATSHHWTWEHHPKSRFSKVAVLQMVGWLEIRG 102
           G   LAL+K +GRKCI+LGAR++TIVW  T  +WTWEHHP SRF++VAVL  V WLEIRG
Sbjct: 98  GDKSLALEKWTGRKCIMLGARNITIVWSDTPEYWTWEHHPDSRFAEVAVLLQVWWLEIRG 157

Query: 103 SVSCRILSPRTTYGVYFVFKMKKRVHEGFNDHPCEAMVGIVGTQSHTKSICLDPFI---H 162
            +SCRIL+ RTTYGVY VFKM +  + GFN    E   GI+GT+S  K++CLDP +    
Sbjct: 158 RMSCRILTRRTTYGVYLVFKMNEDEYRGFNFDLAEVRAGILGTESDPKTVCLDPDLENSR 217

Query: 163 IRKPGWPCSSLFRPPPKNMSEFEQPTKRPDGWFEIELGEFHSGDGDDEIEMTLMDVNG-- 222
           +R   W    L     +  SE EQP +R DGWFEIELGEF SGDGDDE+EM LM+V G  
Sbjct: 218 LRLAPW----LIDHSLEMSSELEQPKERQDGWFEIELGEFESGDGDDEVEMDLMEVKGGT 277

Query: 223 IKNGLVVEGIVIRPKPSSVV 238
            K GLVVEGI IRPKP+SV+
Sbjct: 278 RKIGLVVEGIEIRPKPTSVL 293

[Close]

BLAST of Sed0026249 vs. ExPASy TrEMBL
Match: A0A0A0LUI2 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G421930 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 1.0e-54
Identity = 110/193 (56.99%), Postives = 141/193 (73.06%), Query Frame = 0


Query: 47  LALKKRSGRKCIILGARSLTIVWGATSHHWTWEHHPKSRFSKVAVLQMVGWLEIRGSVSC 106
           L+L ++SG+KCI+LGAR L+++WG TS +W+W+ HP+SRF++VAVL    WLE+RG +SC
Sbjct: 110 LSLDRQSGKKCIMLGARGLSLLWGDTSRYWSWDRHPRSRFAEVAVLLKAWWLELRGRISC 169

Query: 107 RILSPRTTYGVYFVFKMKKRVHEGFNDHPCEAMVGIVGTQSH-TKSICLDPFIHIRKP-G 166
           +ILSPRTTY VYFVFKMK   +EGFN +P +A VGIVGT++H  +S+CLDP  H+  P  
Sbjct: 170 KILSPRTTYAVYFVFKMKNCNYEGFNFYPADATVGIVGTENHGRRSVCLDP--HLDNPRQ 229

Query: 167 WPCSSLFRPPPK-NMSEFEQPTKRPDGWFEIELGEFHSGDGDDEIEMTLMDVNG--IKNG 226
           W    L  P P   M   E P +R DGWF+IELGEF SGDG DE+E+ LM+V G   K G
Sbjct: 230 WRRGFLPSPGPSVEMLGLEWPQERRDGWFQIELGEFESGDGADEVEIALMEVKGHSTKTG 289

Query: 227 LVVEGIVIRPKPS 235
           L+VEG  IRPK S
Sbjct: 290 LIVEGFEIRPKHS 300

[Close]

BLAST of Sed0026249 vs. ExPASy TrEMBL
Match: A0A1S3BXH9 (F-box protein PP2-B10-like OS=Cucumis melo OX=3656 GN=LOC103494284 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 3.3e-53
Identity = 107/197 (54.31%), Postives = 141/197 (71.57%), Query Frame = 0


Query: 47  LALKKRSGRKCIILGARSLTIVWGATSHHWTWEHHPKSRFSKVAVLQMVGWLEIRGSVSC 106
           L+L ++SG+KCI++GAR L++VWG TS +W+W+ HP+SRF++VAVL  V WLE+RG +SC
Sbjct: 99  LSLDRQSGKKCIMVGARGLSVVWGDTSRYWSWDRHPRSRFAEVAVLLKVWWLELRGRISC 158

Query: 107 RILSPRTTYGVYFVFKMKKRVHEGFNDHPCEAMVGIVGTQSH-TKSICLDPFIHIRKP-- 166
            ILSP+TTY VY VF+MK   +EGFN +P +A VGIVGT++H  +S+CLDP  H+  P  
Sbjct: 159 NILSPKTTYAVYLVFRMKNCNYEGFNFYPADATVGIVGTENHGRRSVCLDP--HLDNPLK 218

Query: 167 ---GWPCSSLFRP---PPKNMSEFEQPTKRPDGWFEIELGEFHSGDGDDEIEMTLMDVNG 226
              G+    L  P   P   M   E P +R DGWF+IELGEF SGDG DE+E+ LM+V G
Sbjct: 219 WRRGYLEPRLMTPLPGPSVEMLGLEWPQERRDGWFQIELGEFESGDGGDEVEIALMEVKG 278

Query: 227 --IKNGLVVEGIVIRPK 233
             +K GL+VEG  IRPK
Sbjct: 279 HFVKTGLIVEGFEIRPK 293

[Close]

BLAST of Sed0026249 vs. TAIR 10
Match: AT2G02360.1 (phloem protein 2-B10 )

HSP 1 Score: 139.4 bits (350), Expect = 3.7e-33
Identity = 75/188 (39.89%), Postives = 106/188 (56.38%), Query Frame = 0


Query: 49  LKKRSGRKCIILGARSLTIVWGATSHHWTWEHHPKSRFSKVAVLQMVGWLEIRGSVSCRI 108
           L+K SG++C++L A +L+I+WG    +W W   P+SRF KVA L+ V W EIRG  + R+
Sbjct: 98  LEKASGKRCLMLSAMNLSIIWGDNPQYWQWIPIPESRFEKVAKLRDVCWFEIRGRTNTRV 157

Query: 109 LSPRTTYGVYFVFKMKKRVHEGFNDHPCEAMVGIVGTQSHTKSICLDPFIHIRKPGWPCS 168
           LSPRT Y  Y VFK   + + GF +   EA VG+VG +   + IC    I          
Sbjct: 158 LSPRTRYSAYIVFKGVDKCY-GFQNVAIEAAVGVVGQEPSRRLICFSEAIR--------- 217

Query: 169 SLFRPPPKNMSEFEQPTKRPDGWFEIELGEFHSGDG---DDEIEMTLMDVNGI--KNGLV 228
                  +      +P +R DGW EIELGEF +  G   +DEIEM+ ++   +  K GL+
Sbjct: 218 -------RGRRNVVKPKQREDGWMEIELGEFFNDGGIMDNDEIEMSALETKQLNRKCGLI 268

Query: 229 VEGIVIRP 232
           ++GI IRP
Sbjct: 278 IQGIEIRP 268

[Close]

BLAST of Sed0026249 vs. TAIR 10
Match: AT2G02240.1 (F-box family protein )

HSP 1 Score: 134.8 bits (338), Expect = 9.1e-32
Identity = 73/188 (38.83%), Postives = 106/188 (56.38%), Query Frame = 0


Query: 49  LKKRSGRKCIILGARSLTIVWGATSHHWTWEHHPKSRFSKVAVLQMVGWLEIRGSVSCRI 108
           L+K SG++CI+L ++ L I WG++  +W W   P+SRF+K+A L  V W EIRG  S R+
Sbjct: 145 LEKASGKRCIMLSSKELWITWGSSPEYWQWISIPESRFNKIAELLDVCWFEIRGKTSARV 204

Query: 109 LSPRTTYGVYFVFKMKKRVHEGFNDHPCEAMVGIVGTQSHTKSICLDPFIHIRKPGWPCS 168
           LSP T Y  Y VFK K R   G    P E  +G+VG +S  +      FI+   P     
Sbjct: 205 LSPGTRYSAYIVFKTKDRC-PGLGHLPVEVGLGLVGQESSKR------FIYFIGP----- 264

Query: 169 SLFRPPPKNMSEFEQPTKRPDGWFEIELGEFHSGDGDDEIEMTLMDVN--GIKNGLVVEG 228
              R   +   +  +P +R DGW E ELGEF + +  DEIE +++++     K+GL+++G
Sbjct: 265 -RDRRGRRETRDVTKPDQREDGWMEAELGEFFNEERCDEIEFSVIEIKSPSWKSGLIIQG 319

Query: 229 IVIRPKPS 235
           I  RP  S
Sbjct: 325 IEFRPTKS 319

[Close]

BLAST of Sed0026249 vs. TAIR 10
Match: AT2G02230.1 (phloem protein 2-B1 )

HSP 1 Score: 129.8 bits (325), Expect = 2.9e-30
Identity = 82/221 (37.10%), Postives = 117/221 (52.94%), Query Frame = 0


Query: 49  LKKRSGRKCIILGARSLTIVWGATSHHWTWEHHPKSRFSKVAVLQMVGWLEIRGSVSCRI 108
           ++K SG+KC +L A  LTI+WG +  +W W   P+S+F KVA L+ V W E+RG +SC +
Sbjct: 116 VEKASGKKCYMLSAMELTIIWGDSPAYWKWITVPESKFEKVAELRNVCWFEVRGKISCGM 175

Query: 109 LSPRTTYGVYFVFKMKKRVHEGFNDHPCEAMVGIVGTQSHTKSICLD--------PFIHI 168
           LS  T Y VY VFK       GF+  P EA VG VG  +  KS+  +           H 
Sbjct: 176 LSKGTHYSVYVVFKTANGRSYGFDLVPVEAGVGFVGKVATKKSVYFESGNADSRSATSHY 235

Query: 169 RKPGWPCSS----LFRPPPKNMSEFEQ--------------PTKRPDGWFEIELGEFH-- 228
               +   S    + RP  +   E E+              P +R DGW E+ELG+F+  
Sbjct: 236 SGISYAMVSRAFRMRRPWMQVQREEEEEVEGERERGMNVVGPKERVDGWSEVELGKFYIN 295

Query: 229 ----SGDGDDEIEMTLMDV-NG-IKNGLVVEGIVIRPKPSS 236
                 DG DEIE+++M+  NG  K+GL+++GI IRP+ S+
Sbjct: 296 NGGCGDDGSDEIEISIMETQNGNWKSGLIIQGIEIRPERSN 336

[Close]

BLAST of Sed0026249 vs. TAIR 10
Match: AT1G80110.1 (phloem protein 2-B11 )

HSP 1 Score: 125.6 bits (314), Expect = 5.5e-29
Identity = 76/197 (38.58%), Postives = 106/197 (53.81%), Query Frame = 0


Query: 42  LGGSLL--ALKKRSGRKCIILGARSLTIVWGATSHHWTWEHHPKSRFSKVAVLQMVGWLE 101
           + G+LL  +L+++SG KC ++ AR+L IVWG    +W W   P +RF +VA L MV WLE
Sbjct: 76  INGTLLSFSLERKSGNKCYMMAARALNIVWGHEQRYWHWISLPNTRFGEVAELIMVWWLE 135

Query: 102 IRGSVSCRILSPRTTYGVYFVFKMKKRVHEGFNDHPCEAMVGIVGTQSHTKSICLDPFIH 161
           I G ++  +LS  T Y  YFVFK     + GF   P E  + +  T+S T ++     I 
Sbjct: 136 ITGKINITLLSDDTLYAAYFVFKWNHSPY-GFR-QPVETSLVLADTES-TDNVVQPSMIS 195

Query: 162 IRKPGWPCSSLFRPPPKNMSEFEQPTKRPDGWFEIELGEFHSGDGD-DEIEMTLMDVNG- 221
           + +                 E + P  R DGW+E+ELG+F    GD  EIEM+L +  G 
Sbjct: 196 LMQ------------DSGGEEGQSPVLRRDGWYEVELGQFFKRRGDLGEIEMSLKETKGP 255

Query: 222 -IKNGLVVEGIVIRPKP 234
             K GL+V GI IRP P
Sbjct: 256 YEKKGLIVYGIEIRPVP 257

[Close]

BLAST of Sed0026249 vs. TAIR 10
Match: AT1G09155.1 (phloem protein 2-B15 )

HSP 1 Score: 124.8 bits (312), Expect = 9.4e-29
Identity = 76/211 (36.02%), Postives = 105/211 (49.76%), Query Frame = 0


Query: 43  GGSLLALKKRSGRKCIILGARSLTIVWGATSHHWTWEHHPKSRFSKVAVLQMVGWLEIRG 102
           G  +  ++K SG+   IL +R L+I W    H+W+W     SRFS+   L M  WLEI G
Sbjct: 81  GRKIFKIEKLSGKISYILSSRDLSITWSDQRHYWSWSPRSDSRFSEGVQLIMTDWLEIIG 140

Query: 103 SVSCRILSPRTTYGVYFVFKMKKRVHEGFNDHPCEAMVGIVGTQSHTKSI---CLD---- 162
            +    LSP T YG Y + K+  R + G +  P E  + +   +   KS    CLD    
Sbjct: 141 KIQTGALSPNTNYGAYLIMKVTSRAY-GLDLVPAETSIKVGNGEKKIKSTYLSCLDNKKQ 200

Query: 163 ----PFIHIRKPGWPCSSLFRPPPKNMSEFEQPTKRPDGWFEIELGEFH--SGDGDD--E 222
                F   R+       + R      S   +P  R DGW EIELGEF   SG+GDD  E
Sbjct: 201 QMERVFYGQREQRMATHEVVR------SHRREPEVRDDGWMEIELGEFETGSGEGDDDKE 260

Query: 223 IEMTLMDVNG--IKNGLVVEGIVIRPKPSSV 237
           + M+L +V G  +K G+ ++GI +RPKP  V
Sbjct: 261 VVMSLTEVKGYQLKGGIAIDGIEVRPKPLKV 284

The following BLAST results are available for this feature:

BLAST of Sed0026249 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878468.1	3.9e-61	58.91	F-box protein PP2-B10-like [Benincasa hispida]	[more]
XP_023001982.1	1.4e-58	59.50	F-box protein PP2-B10-like [Cucurbita maxima]	[more]
XP_022135496.1	2.6e-57	59.39	F-box protein PP2-B10-like [Momordica charantia]	[more]
XP_038880064.1	4.5e-57	55.94	F-box protein PP2-B10-like [Benincasa hispida]	[more]
XP_022929417.1	5.9e-57	59.00	F-box protein PP2-B10-like [Cucurbita moschata]	[more]

BLAST of Sed0026249 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZVQ6	5.2e-32	39.89	F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1	[more]
Q3E6P4	1.3e-30	38.83	F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1	[more]
Q6NPT8	4.1e-29	37.10	F-box protein PP2-B1 OS=Arabidopsis thaliana OX=3702 GN=PP2B1 PE=1 SV=1	[more]
Q949S5	7.8e-28	38.58	F-box protein PP2-B11 OS=Arabidopsis thaliana OX=3702 GN=PP2B11 PE=1 SV=1	[more]
O80494	1.3e-27	36.02	F-box protein PP2-B15 OS=Arabidopsis thaliana OX=3702 GN=PP2B15 PE=2 SV=2	[more]

BLAST of Sed0026249 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KI64	6.8e-59	59.50	F-box protein PP2-B10-like OS=Cucurbita maxima OX=3661 GN=LOC111495996 PE=4 SV=1	[more]
A0A6J1C0X7	1.3e-57	59.39	F-box protein PP2-B10-like OS=Momordica charantia OX=3673 GN=LOC111007437 PE=4 S...	[more]
A0A6J1EMR0	2.9e-57	59.00	F-box protein PP2-B10-like OS=Cucurbita moschata OX=3662 GN=LOC111435991 PE=4 SV...	[more]
A0A0A0LUI2	1.0e-54	56.99	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G421930 PE=4 ...	[more]
A0A1S3BXH9	3.3e-53	54.31	F-box protein PP2-B10-like OS=Cucumis melo OX=3656 GN=LOC103494284 PE=4 SV=1	[more]

BLAST of Sed0026249 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02360.1	3.7e-33	39.89	phloem protein 2-B10	[more]
AT2G02240.1	9.1e-32	38.83	F-box family protein	[more]
AT2G02230.1	2.9e-30	37.10	phloem protein 2-B1	[more]
AT1G80110.1	5.5e-29	38.58	phloem protein 2-B11	[more]
AT1G09155.1	9.4e-29	36.02	phloem protein 2-B15	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025886	Phloem protein 2-like	PFAM	PF14299	PP2	coord: 56..231 e-value: 9.9E-49 score: 165.1
None	No IPR available	PANTHER	PTHR32278	FAMILY NOT NAMED	coord: 46..233
None	No IPR available	PANTHER	PTHR32278:SF71	SUBFAMILY NOT NAMED	coord: 46..233

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0026249.1	Sed0026249.1	mRNA