Sed0026226 (gene) Chayote v1

Overview


Name	Sed0026226
Type	gene
Organism	Sechium edule (Chayote v1)
Description	DAR GTPase 2, mitochondrial isoform X1
Location	LG02: 51243402 .. 51249057 (+)
RNA-Seq Expression	Sed0026226
Synteny	Sed0026226

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGCGGCAAACTTGATGAGTAGAATATGTGCGGCCATCGGAAACAGAACGGCCGGCGGATTTGACGATCCTCACACGGCGGCCGCAGAACGAATTCCGGCGGTCGATTTTGTTCTTGAGGTCAGAGATGCTAGGGTACACTTGTTCTTACTATTTTGTTTACTTGTTCTCATTGCACGTTATTGAATCTCGTATCGGCACTTCAAATGTTCGTTGAAATGCCGATTCACGAGGATTTTGATTTTAAGCTTCAATTCATTTCTTGTTCTATTTGGAAACCTTAATTTGTTTATTCTCTTATGTGGTTGTCTGTGATAGAATCTACCACACTATTTTATTAATCTACGATAAAAACCTCTCGAGAGAATCTCTCAAAGAGCCACAATACAATGATGATAATTCAATGGATGCCTAACAAAGACCTAACCTCTCCTATTTATAATAACTCTAAACCCTAGCCTTTTACTTGCTCCCCAAGTAAACCCTAAAATAACCTAATTGAATAATAATCTCTAATAAGGCCCAAAAGTCCAATACAATTGAAATAACAATTAATTAATAAATAATAAATACTAATACTAATACTAATATTCCTAAAAACTCTAAGGTCCGGATCGTATCAATACTTTCCCCCCTAAGAGCCACCTTGTCCTCAAGGTGTTCCATCTCTGATGCCACCTTCTGCAACTCCATCTTCTGGAGAAAAATCAGTCACATCAACATCCTGGTAATCGTGTGCATCCCGAACGACCCACACATCCAAATTCTGGAGCTCTTTCTTCTGACAACGATGTCCTAGGACAAATCGTTCATCACAAAGGAAACACATCACTTTATCCTTCTGTGCTCGAATTTCGGCTTCAGTGAGTTTTTTACAGGACGCCGGGTGAATGGTTGTAGTCCTGTGAGAAAGAGTCTCTGTGCTTTCCGTTCCCGAAACAATCGTTCCTACTTTAGCCTTGATCGTTGCAGAAGTACTTCCCTCATTTTGGGCAGCTTGAAAAGCAAAATCATCCTCAATCACTTGGGCCATAAAACATTTTCTCTTCGATGCCCACTGGCCGCAGTTTACGCATCGCGCTCTGTATCTCCTCTTTTAGTCCACTTTCCCACTTCCCCTCCAATGCACTCGCACTGATATCGCGCATTCCCTTAGCAAAGCGCTCAAAACTTTGGCGATATTCCTTCACCGTACCTATTTGCTTCAAACTCATGAAGTTGACATACTTATTTGCCTGAGCCGCTGGTTGGAAACGCTCCAACAACCCATCTTTGAATTCGTTCCAGGAACGAAAAGGAGCACGATCCTCCTTATACTGAAGCCACTCCAATGCCTCCCCTTCTAAACATAACCCGGCTGCCTCAACTCCTTCATATTCAGTCAGCTTGTTTACCAGGAAATAACGCTCGACCCGACTTAACCATCCCACCGAATCCTCGTCAGCAAGACCCTTGAAAACCGGCATCTCCAATTTCCTGAATCTCCTGTCACATCCCAGTCCCTCCCTTCCTTCTACTCTCTGACTTCCTCGTTCAAATCTTTCTTCTCCTCCCCACCCGAAATCTCGTCCCCTATTTCGGACATTGTCACTCTCACTCCACCCCCTATCGTTCCAACCGTCATGCGCCAACGACCTATCATAGCCCATGCGCAACCTCCTCTCCTCCAGAACCCTGTTTTCTCTCCCCACGACCCTTGGATCTCCCCTTTGGCCGAACTCCGGTCCTGGTAAATCGTCAACCCAATTTCGGCCTCGATCGTTCCAACCGTCATGCGCTATCGGTCTGTCGTAACCAATGCGCACCCTCCTATCTTCTGGGAAGCCGTTTCCCCTTCTGTCAAACCGTGGGTCCTCCCTTCGATCGATGTCTGGCCTTGGAAACCTTTCTCCGTCCCCAGGCCCTTGGAACCCATCTCTCTGGTCCAACCCGACTAACCCGGACACACCTGATCCAATTAGCCCACCCCGACCCAATCCGACCAGCCCACCCCGACCCGGCCTGCCCGCGCTCAAGCCACGCCCGTCGCTGCCCAACCTCGCGCCCACCCCATGCCCTCCAACGTCGCCCCTGCCCACACCCAGCCTGATACCCATCCCGCGCCAATCCCCGCACGGCCCCACGACCCAGCTCACGCCCCAACTCGCGTCATCCACGCCACCATTGCCCCAGCTCGTGTCGACCTCGCTTGCACCCCAAACTGCCCCACCCGAGCCCGCGCCATGTCCCCGACCCGTATCGCCCGCGCCCCAACCTGCCCCGCCCGAGCCCCATCTCGAACCCACGCCACGACCCCAACCTGCGCGGCCCGTCCCCTGCCTTTCCACGTCGTCGCCCGCGCACGCGACCTTGCCCCAGCCTCCTTCGCTGGTGCCTGCGCCTTCCCTGCCGCCCTTGCTCCTGGTCGACCCACCCGCCACTCCGCCGTCTCCCTCTGCTGCAGCTAACCCGACGACGTTGCTTTCCCCTAGGGTTTCACTCGCGGTCCCTTTTCCCTTGGCCTCTGGATTCGACTAGTTAACCGGCAGCCCCGGAGTGCGTTCTAACAACAACTGGATGTTTCGATTCATTTGTTCAATTTTTAAATCTTGCTGTTCGAACTTCGCTTCGATCTTTTGCCCTAATCGTTCTTCCAACGACTCTAGCCTTGCTTCCGTTTCCTGCTGTTTCTTTGCCAATTCGGCTGAGCTATCTTCCCAACTTTGCATCCTCATTTTCATCTTAGTCGAGACCATTCCCGGATCGGTAAACGGCTCTAATACCAAAATGATAGAATCTACCACACTATTTTATTAATCTACGATAAAAACCTCTCGAGAGAATCTCTCAAAGAGCCACAATACAATGATGATAATTCAATGGATGCCTAATAAAGACCTAACCTCTCCTATTTATAATAACTCTAAACCCTAGCCTTTTACTTGCTCCCCAAGTAAACCCTAAAATAACCTAATTGAATAATAATCTCTAATAAGGCCCAAAAGCCCAATACAATTGAAATAACAATTAATTAATAAATAATAAATACTAATACTAATATTCCTAAAAACTCCAAGGTCCGGATCGTATCAGTCTGTTTCGTGTTCGATATAAAATAGTAGAAGAAGATTCTTGTTGTAATGAAAATGGTGGATTAGGATTATTATTGTGAAGGATGGAAAGAATCTGTATATGAACGCATGAAAGATTATTCGACATCATCGAAACGAATCATTGTATCGAACAAAACAGACCTCGCGGATCGATCATAGACAAAGTTAGAAACTTCTGTAACTTCAATGTTTTTCGGTCATTTTATCTTATTATAGTTATTACTTCTGAGCTTTTACTTCTTGAATTGCTTTCAATTCATTCTGTATTTCTTAGGTCATTAATGTTGCTTAGGTGATCTGTTACTGAAATGTTTCTTCTAGTTTTTTGATCGAACATAATAATGGCAATTTTGCGCAGGTGAGATTATTAGATGATACGTATTGAATACCTCTGGGATGTAGTTTATTCTTTTCCCTTGTTATAATCATTGATCGCACATGAATTTTAAGATTTTCCATTGTTATGATTATCATATTTGACCTTCCAATTATCTTTGAATAGAAGTACTTATTTGTTACTTATAATTAAGAAGAGAATAATACAGTAAGAATATAAATCAGGCTCAGTACTTAGCTATCGTTTCACATGAATCCATCAGATATGTACCATTTTTGAATCATTCCTTTACAATTTGAATCACATTCAAAAGATTTATCAGTTTGTATTGATTGCTTCACATGTTATACTTCACTCTGTTAAAAGGACTGGACAAGATATTTTAACGACCACAACTGCATCTCTTATGGCGTCAATTCCCATAATAAGGAGAATACTAGAGAGGTAAAGAACTAAGGCATAATCCATTTTTTATTTTTCCATCTTGTTTGAGCTTACTCATTTTCCTTTTTTTTTTTGGCTTAGAAATGCTGGTGAAGGTAATTGTAAGATGTTTTGGTTTAGAAATATATGCTGGAGGTTTCTAGGGCAATTGATTATGAAATTGTTTGGATGAATGATGATGATTATTTATTGTCGAATTAAGTTAAACCACCAATCAACCGAAAAACTTAAGCCGATGGGTTGTGGTAAATTTAATTATGTCAGCCAACACTCCCCCCTCACTTGTGGGTTAAGAAATTTGAGAAATGCCCTACAATCAGTTGGGGAGTTAGAGAATTATGGTTATAAATAGGAGGGGTTTGAGTGGTGGAGGGCACTTGGAATTGCATGAGAATTAGGACTTGAGAGAAACAAAAATTTAGGAGGATCCAAGTATCTAGAATCACTTGCTTTATCGTGTATGTTTGTTATGGTTTGCTAATCAACAGATATGAGTTCTATAAAAAGGGAAGTTGAAGCATGCTATAGTTAGTCCACGGCTCGATGAAACAAAATACATCAGCAGCCTGAAGGTATGCCACTTTTCCCCTCACCATTACAGAGGGCGGTAACGTTGTCTAATCTTGGGTTAACAAGTCTTAAAAGAGGGCATTGTTTAATTTTCTATTTGTGGGTAGCCAAGAAAGAACTCAAATTCATTAAATAATAATAATAATTTGGAATGAAACGACTAATCATGAGTATGAATCTAGAGCCTCCTACTCTAATACTAAGTTGAATCATGTTAAATCATCATTTAACTCAAAAACTTAAACCGTTAGTTCGAGGTAAATATATATATCAAGTATCAACCAACATTTAATAAAATATAAGTATCATCCAACACTATATCACCAAGGGCTTATTATTTGTAATAGAAGTAATTGGTGAGTCAAAATTTTAAATGCTTTCTAACCATCATTTGGTTGCCTAGTAGTTTAATAAGATTCTTGTACATCAAAAAAATGCTTAGAGGTTATGAGTTCAATCTATGACGACCATCTATCTAGTTATAATTTCTTACTTGTTACTTTGACAACGAAATGTAGTTGGGTGAGTGATTGTCCTATAAAAATAATCGAGATGCATGTAAGCTGGCTCGAACTCATATATATGTATGTGTGTGTGTATATATGTATGTACATAAAGTTTAGCTTTCTCAAACTTCTCCCTGAAGGCGTTTTACGACCTGACATGCTACATTAAGTTGATGGATAATTCTTAGTTTCTTGCCAATACAAGATTGGTTCAAGACTCTAGTTGATCACTCTTCTCTTGACTGTTTTTACATTTTTATGTGTGGGTTTGTAGTTTACACTTGATAACTTGCCTTTGCAAGTAAACTTCCACACTGAGCGACTCGAGAATACGGTGGGATAAGTATCCCGATTCTAGGCTTCTTATCATAACGGATACCATATTAGTTTCATTTCAAGTTGATGGAAGTGTTGCTAGTAAAATGCCAGTGGGCTGATAGAAATACTTTGTTGTGTGTGCAGGACATTCTTGACTTCTTGTAAATGATGTTCGTAGAATTCTCTTCAACACTATATCATCTTCTGATGGCAATTTGGATCATGAAAGGGACATGAGAAATCTTATTGGAACGCTATTGATTGCTCTGCACAAAGCTTTGCACGTTCCTTCCGATTTTAGCAATGATGCTTCTATCAAGGTGGCTTCTAAACTTTTGAATCTTTATCGTACTTGGAGGCTTGGTCATTACATACTTGATTTTTAA

mRNA sequence

ATGGTTGCGGCAAACTTGATGAGTAGAATATGTGCGGCCATCGGAAACAGAACGGCCGGCGGATTTGACGATCCTCACACGGCGGCCGCAGAACGAATTCCGGCGGTCGATTTTGTTCTTGAGGTCAGAGATGCTAGGGATTATTATTGTGAAGGATGGAAAGAATCTGTATATGAACGCATGAAAGATTATTCGACATCATCGAAACGAATCATTGTATCGAACAAAACAGACCTCGACTGGACAAGATATTTTAACGACCACAACTGCATCTCTTATGGCGTCAATTCCCATAATAAGGAGAATACTAGAGAGTTAAACCACCAATCAACCGAAAAACTTAAGCCGATGGGTTGTGGTAAATTTAATTATGTCAGCCAACACTCCCCCCTCACTTGTGGGTTAAGAAATTTGAGAAATGCCCTACAATCAGTTGGGGAGTTAGAGAATTATGGGAAGTTGAAGCATGCTATAGTTAGTCCACGGCTCGATGAAACAAAATACATCAGCAGCCTGAAGTATCATCCAACACTATATCACCAAGGGCTTATTATTTGTAATAGAAGTAATTGTTTCTTGCCAATACAAGATTGGTTCAAGACTCTAGTTGATCACTCTTCTCTTGACTGTTTTTACATTTTTATAATTCTCTTCAACACTATATCATCTTCTGATGGCAATTTGGATCATGAAAGGGACATGAGAAATCTTATTGGAACGCTATTGATTGCTCTGCACAAAGCTTTGCACGTTCCTTCCGATTTTAGCAATGATGCTTCTATCAAGGTGGCTTCTAAACTTTTGAATCTTTATCGTACTTGGAGGCTTGGTCATTACATACTTGATTTTTAA

Coding sequence (CDS)

ATGGTTGCGGCAAACTTGATGAGTAGAATATGTGCGGCCATCGGAAACAGAACGGCCGGCGGATTTGACGATCCTCACACGGCGGCCGCAGAACGAATTCCGGCGGTCGATTTTGTTCTTGAGGTCAGAGATGCTAGGGATTATTATTGTGAAGGATGGAAAGAATCTGTATATGAACGCATGAAAGATTATTCGACATCATCGAAACGAATCATTGTATCGAACAAAACAGACCTCGACTGGACAAGATATTTTAACGACCACAACTGCATCTCTTATGGCGTCAATTCCCATAATAAGGAGAATACTAGAGAGTTAAACCACCAATCAACCGAAAAACTTAAGCCGATGGGTTGTGGTAAATTTAATTATGTCAGCCAACACTCCCCCCTCACTTGTGGGTTAAGAAATTTGAGAAATGCCCTACAATCAGTTGGGGAGTTAGAGAATTATGGGAAGTTGAAGCATGCTATAGTTAGTCCACGGCTCGATGAAACAAAATACATCAGCAGCCTGAAGTATCATCCAACACTATATCACCAAGGGCTTATTATTTGTAATAGAAGTAATTGTTTCTTGCCAATACAAGATTGGTTCAAGACTCTAGTTGATCACTCTTCTCTTGACTGTTTTTACATTTTTATAATTCTCTTCAACACTATATCATCTTCTGATGGCAATTTGGATCATGAAAGGGACATGAGAAATCTTATTGGAACGCTATTGATTGCTCTGCACAAAGCTTTGCACGTTCCTTCCGATTTTAGCAATGATGCTTCTATCAAGGTGGCTTCTAAACTTTTGAATCTTTATCGTACTTGGAGGCTTGGTCATTACATACTTGATTTTTAA

Protein sequence

MVAANLMSRICAAIGNRTAGGFDDPHTAAAERIPAVDFVLEVRDARDYYCEGWKESVYERMKDYSTSSKRIIVSNKTDLDWTRYFNDHNCISYGVNSHNKENTRELNHQSTEKLKPMGCGKFNYVSQHSPLTCGLRNLRNALQSVGELENYGKLKHAIVSPRLDETKYISSLKYHPTLYHQGLIICNRSNCFLPIQDWFKTLVDHSSLDCFYIFIILFNTISSSDGNLDHERDMRNLIGTLLIALHKALHVPSDFSNDASIKVASKLLNLYRTWRLGHYILDF

Homology

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BLAST of Sed0026226 vs. NCBI nr
Match: XP_022962198.1 (DAR GTPase 2, mitochondrial isoform X1 [Cucurbita moschata])

HSP 1 Score: 208.0 bits (528), Expect = 1.1e-49
Identity = 155/368 (42.12%), Postives = 190/368 (51.63%), Query Frame = 0


Query: 1   MVAANLMSRIC-----AAIGNRTAGGFDDPHTAAA-----ERIPAVDFVLEVRDARDYYC 60
           M AA LM +I      AA+G+R + G+ DPH AAA     ERIP VDFVLEVRDAR    
Sbjct: 1   MAAATLMRKIGSAINEAALGSRISSGWYDPHMAAASRAVVERIPLVDFVLEVRDARIP-- 60

Query: 61  EGWKESVYERMKDYSTSSKRIIVSNKTDL-------DWTRYFNDHNCISYGVNSHNKENT 120
              K S YE MK+Y  SSKRII+ NKTDL        WTR+F DHNCISYGVNSHNKEN 
Sbjct: 61  ---KTSEYELMKNYPLSSKRIIILNKTDLADRSQTEAWTRFFEDHNCISYGVNSHNKENI 120

Query: 121 RELNHQSTEKLKPMGCGKFNYVSQHSP--LTCGLRN-----LRNALQSVGELE--NYGKL 180
           RE       +++ +   K +  S H+   +  G+ N     L N+L  +G +     GKL
Sbjct: 121 REFLTFLQARVREL---KKSGHSSHATTMMLVGIPNVGKSALANSLHQIGRISAAEKGKL 180

Query: 181 KHAIVSPRLDETKYISSLKY--HPTLY-----------HQGLIICNRSNCFLPIQD---- 240
           K+AIVSP+  ETK ISSLK   HP +Y              + +C++      I+D    
Sbjct: 181 KNAIVSPQPGETKNISSLKIASHPNIYVLDTPGIFPPKILNIEVCSKLALTGAIRDILVG 240

Query: 241 --------------------WFKTLVDHSSLDCFY-----------------------IF 283
                               W       S L+C                         + 
Sbjct: 241 EQLLVQYLLTLINSSDKYKKWGNLSATDSLLECSTCPSLEKQKRGYPSDHTQDIIVNDVR 300

[Close]

BLAST of Sed0026226 vs. NCBI nr
Match: XP_022146907.1 (DAR GTPase 2, mitochondrial isoform X1 [Momordica charantia])

HSP 1 Score: 208.0 bits (528), Expect = 1.1e-49
Identity = 158/370 (42.70%), Postives = 194/370 (52.43%), Query Frame = 0


Query: 1   MVAANLMSRIC-----AAIGNRTAGGFDDPHTAA-----AERIPAVDFVLEVRDARDYYC 60
           M AA    RI       AIGNRT+GG+ DPH AA     AERIP VDFVLEVRDAR    
Sbjct: 1   MAAATFARRIGTAIKETAIGNRTSGGWYDPHMAAASRAVAERIPLVDFVLEVRDARIPV- 60

Query: 61  EGWKESVYERMKDYSTSSKRIIVSNKTDLD-------WTRYFNDHNCISYGVNSHNKENT 120
                S YE MK++S SSKRIIV NK DL        WT+YF DHNC+SYGVN+HNK+N 
Sbjct: 61  ----SSEYEIMKNHSPSSKRIIVMNKVDLADRSQTEVWTKYFEDHNCVSYGVNAHNKDNI 120

Query: 121 RELNHQSTEKLKPMGCGKFNYVSQHSP--LTCGLRN-----LRNALQSVGELE--NYGKL 180
           RE  +    +++ +   K +  S H+   +  G+ N     L N+L  +G +     GKL
Sbjct: 121 REFLNFLQARVREL---KKSGHSSHATTMMLVGIPNVGKSALANSLHQIGRISAAEKGKL 180

Query: 181 KHAIVSPRLDETKYISSLKY--HPTLY---HQGLI--------ICNRSNCFLPIQD---- 240
           KHA+VSP   ETK ISSLK   HP +Y     G++        +C++      I+D    
Sbjct: 181 KHAVVSPEPGETKNISSLKIASHPNIYVLDTPGILPPKILNIEVCSKLALTGAIRDILVG 240

Query: 241 ------WFKTLVD----------------HSSLDCFYI-----------------FI--- 283
                 +  T+++                 SSL+C                    FI   
Sbjct: 241 ERVIVQYLLTILNSSDKYKKWASLSATNCDSSLECSTCSNSESQKRGYPSDHTQDFIVND 300

[Close]

BLAST of Sed0026226 vs. NCBI nr
Match: KAG6598334.1 (DAR GTPase 2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 207.2 bits (526), Expect = 1.8e-49
Identity = 157/368 (42.66%), Postives = 189/368 (51.36%), Query Frame = 0


Query: 1   MVAANLMSRIC-----AAIGNRTAGGFDDPHTAAA-----ERIPAVDFVLEVRDARDYYC 60
           M AA LM +I      AAIG+R   G+ D H AAA     ERIP VDFVLEVRDAR    
Sbjct: 1   MAAATLMRKIGSAINEAAIGSRITSGWYDAHMAAASRAVVERIPLVDFVLEVRDARIP-- 60

Query: 61  EGWKESVYERMKDYSTSSKRIIVSNKTDLD-------WTRYFNDHNCISYGVNSHNKENT 120
              K S YE MK+Y  SSKRII+ NKTDL        WTR+F DHNCISYGVNSHNKEN 
Sbjct: 61  ---KTSEYELMKNYPLSSKRIIILNKTDLADRSQTEVWTRFFEDHNCISYGVNSHNKENI 120

Query: 121 RELNHQSTEKLKPMGCGKFNYVSQHSP--LTCGLRN-----LRNALQSVGELE--NYGKL 180
           REL      +++ +   K +  S H+   +  G+ N     L N+L  +G +     GKL
Sbjct: 121 RELLTFLQARVREL---KKSGHSSHATTMMLVGIPNVGKSALANSLHQIGRISAAEKGKL 180

Query: 181 KHAIVSPRLDETKYISSLKY--HPTLY-----------HQGLIICNRSNCFLPIQD---- 240
           K+AIVSP+  ETK ISSLK   HP +Y              + IC++      I+D    
Sbjct: 181 KNAIVSPQPGETKNISSLKIASHPNIYVLDTPGIFPPKILNIDICSKLALTGAIRDILVG 240

Query: 241 --------------------WFKTLVDHSSLDCFY-----------------------IF 283
                               W       S L+C                         + 
Sbjct: 241 EQLLVQYLLTLINSSDKYKKWGNLSATDSLLECSTCSGLEKQKRGYPSDHTQDIIVNDVR 300

[Close]

BLAST of Sed0026226 vs. NCBI nr
Match: XP_023546448.1 (DAR GTPase 2, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 206.8 bits (525), Expect = 2.4e-49
Identity = 157/368 (42.66%), Postives = 195/368 (52.99%), Query Frame = 0


Query: 1   MVAANLMSRIC-----AAIGNRTAGGFDDPHTAAA-----ERIPAVDFVLEVRDARDYYC 60
           M AA LM +I      AAIG+R + G+ DPH AAA     ERIP VDFVLEVRDAR    
Sbjct: 1   MAAATLMRKIGSAINEAAIGSRISSGWYDPHMAAASRAVVERIPLVDFVLEVRDARVP-- 60

Query: 61  EGWKESVYERMKDYSTSSKRIIVSNKTDL-------DWTRYFNDHNCISYGVNSHNKENT 120
              K S YE MK+Y  SSKRII+ NKTDL        WTR+F DHNCISYGVNSHNKEN 
Sbjct: 61  ---KTSEYELMKNYPPSSKRIIILNKTDLADRSQTEAWTRFFEDHNCISYGVNSHNKENI 120

Query: 121 RELNHQSTEKLKPMGCGKFNYVSQHSP--LTCGLRN-----LRNALQSVGELE--NYGKL 180
           RE       +++ +   K +  S H+   +  G+ N     L N+L  +G +     GKL
Sbjct: 121 REFLTFLQARVREL---KKSGHSSHATTMMLVGIPNVGKSALANSLHQIGRISAAEKGKL 180

Query: 181 KHAIVSPRLDETKYISSLKY--HPTLY---HQGLI--------ICNRSNCFLPIQD---- 240
           K+AIVSP+  ETK ISSLK   HP +Y     G++        +C++      I+D    
Sbjct: 181 KNAIVSPQPGETKNISSLKIASHPNIYVLDTPGILPPKILNIEVCSKLALTGAIRDILVG 240

Query: 241 ------WFKTLVDH----------SSLDCFY---------------------------IF 283
                 +  TL++           S+ D                              + 
Sbjct: 241 EQVVVQYLLTLINSSDKYKKWGNLSATDSLLERSTCSSLEKQKRGYPSDHTQDIIVNDVR 300

[Close]

BLAST of Sed0026226 vs. NCBI nr
Match: XP_038884377.1 (DAR GTPase 2, mitochondrial [Benincasa hispida])

HSP 1 Score: 206.1 bits (523), Expect = 4.1e-49
Identity = 157/367 (42.78%), Postives = 185/367 (50.41%), Query Frame = 0


Query: 1   MVAANLMSRICAAI-----GNRTAGGFDDPHTAA-----AERIPAVDFVLEVRDARDYYC 60
           M  A LM +I  AI     G+R + G+ DPH AA     AERIP  DFVLEVRDAR    
Sbjct: 1   MAGATLMRKIGTAIKEAATGSRISSGWYDPHMAAASRAVAERIPLADFVLEVRDARVP-- 60

Query: 61  EGWKESVYERMKDYSTSSKRIIVSNKTDLD-------WTRYFNDHNCISYGVNSHNKENT 120
                S YE MK+Y  SSKRIIV NK DL        WTRYF DHNCISYGVNSHNKEN 
Sbjct: 61  ---MSSEYEIMKNYPPSSKRIIVLNKADLADRSQTEVWTRYFEDHNCISYGVNSHNKENI 120

Query: 121 RELNHQSTEKLKPMGCGKFNYVSQHSP--LTCGLRN-----LRNALQSVGELE--NYGKL 180
           RE  +    +++ +   K +  S H+   +  G+ N     L N+L  +G +     GKL
Sbjct: 121 REFLNFLQARVREL---KKSGHSSHATTMMLVGIPNVGKSALANSLHQIGRISAAEKGKL 180

Query: 181 KHAIVSPRLDETKYISSLKY--HPTLY-----------HQGLIICNRSNCFLPIQD---- 240
           KH IVS +  ETK ISSLK   HP +Y              + +C++      I+D    
Sbjct: 181 KHTIVSSQPGETKNISSLKIASHPNIYVLDTPGIFPPKIHNIEVCSKLALTGAIRDILVG 240

Query: 241 --------------------WFKTLVDHSSLDCFY----------------------IFI 283
                               W       SSL+C                        +  
Sbjct: 241 EHVIVQYLLTIVNSSDKYKKWANLSATDSSLECSNSNLEKQKRRYPSDHTQDIIVNGVRR 300

[Close]

BLAST of Sed0026226 vs. ExPASy Swiss-Prot
Match: O82497 (DAR GTPase 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=DGP2 PE=3 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.9e-28
Identity = 121/340 (35.59%), Postives = 152/340 (44.71%), Query Frame = 0


Query: 25  PHTAAA-----ERIPAVDFVLEVRDARDYYCEGWKESVYERMKDYS-TSSKRIIVSNKTD 84
           PH AAA     ERIP VDFVLE+RDAR         S YE ++ +S   SKRIIV NK +
Sbjct: 31  PHMAAAVRAISERIPLVDFVLEIRDARIPL-----SSEYELLRKFSPLPSKRIIVLNKME 90

Query: 85  L-------DWTRYFNDHNCISYGVNSHNKENTRE----LNHQSTEKLKPMGCGKFNYVSQ 144
           L           YF + N +SY VNSHNK+  ++    L  Q  E  K    G    +  
Sbjct: 91  LADPLELKKCIDYFEERNYLSYAVNSHNKDCVKQLLNFLQSQVRELHKAGHSGHTTTMML 150

Query: 145 HSPLTCGLRNLRNALQSVGELE--NYGKLKHAIVSPRLDETKYISSLKY--HPTLY---H 204
                 G   L N+L  +G +     GKLKH  VS +  +TK I SLK   HP +Y    
Sbjct: 151 LGIPNVGKSALSNSLHHIGRISAAEKGKLKHTTVSSQPGDTKDIMSLKIGSHPNVYVLDT 210

Query: 205 QGLI--------ICNR-----------------SNCFLPI----------------QDWF 264
            G+         IC +                 +  FL I                QD  
Sbjct: 211 PGIFPPNLYDAEICAKLALTGAIPDDIVGELKLARLFLTILNSSHEYKKWAKLCKSQDLT 270

Query: 265 KTLVDHSS-----------LDCFYIFI------ILFNTISSSDGNLDHERDMRNLIGTLL 283
           ++L D SS            D    FI      +L+ TIS+ DGNL+ E  M NLI T  
Sbjct: 271 ESLSDESSKSDAKHKRQYATDHTQDFIVYDVRRVLYETISAFDGNLEDEISMGNLIETQF 330

[Close]

BLAST of Sed0026226 vs. ExPASy Swiss-Prot
Match: Q8L607 (Short integuments 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SIN2 PE=1 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.9e-05
Identity = 27/66 (40.91%), Postives = 40/66 (60.61%), Query Frame = 0


Query: 217 LFNTISSSDGNLDHERDMRNLIGTLLIALHKALHVPSDFSNDASIKVASKLLNLYRTWRL 276
           L+ T+S  DG+ + E D+  LI      L KAL +P   +++A + V+ K L L+RT RL
Sbjct: 304 LYITLSEFDGDTEDENDLECLIEQQFEVLQKALKIPHK-ASEARLMVSKKFLTLFRTGRL 363

Query: 277 GHYILD 283
           G +ILD
Sbjct: 364 GPFILD 368

[Close]

BLAST of Sed0026226 vs. ExPASy TrEMBL
Match: A0A6J1D0W3 (DAR GTPase 2, mitochondrial isoform X1 OS=Momordica charantia OX=3673 GN=LOC111015994 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 5.2e-50
Identity = 158/370 (42.70%), Postives = 194/370 (52.43%), Query Frame = 0


Query: 1   MVAANLMSRIC-----AAIGNRTAGGFDDPHTAA-----AERIPAVDFVLEVRDARDYYC 60
           M AA    RI       AIGNRT+GG+ DPH AA     AERIP VDFVLEVRDAR    
Sbjct: 1   MAAATFARRIGTAIKETAIGNRTSGGWYDPHMAAASRAVAERIPLVDFVLEVRDARIPV- 60

Query: 61  EGWKESVYERMKDYSTSSKRIIVSNKTDLD-------WTRYFNDHNCISYGVNSHNKENT 120
                S YE MK++S SSKRIIV NK DL        WT+YF DHNC+SYGVN+HNK+N 
Sbjct: 61  ----SSEYEIMKNHSPSSKRIIVMNKVDLADRSQTEVWTKYFEDHNCVSYGVNAHNKDNI 120

Query: 121 RELNHQSTEKLKPMGCGKFNYVSQHSP--LTCGLRN-----LRNALQSVGELE--NYGKL 180
           RE  +    +++ +   K +  S H+   +  G+ N     L N+L  +G +     GKL
Sbjct: 121 REFLNFLQARVREL---KKSGHSSHATTMMLVGIPNVGKSALANSLHQIGRISAAEKGKL 180

Query: 181 KHAIVSPRLDETKYISSLKY--HPTLY---HQGLI--------ICNRSNCFLPIQD---- 240
           KHA+VSP   ETK ISSLK   HP +Y     G++        +C++      I+D    
Sbjct: 181 KHAVVSPEPGETKNISSLKIASHPNIYVLDTPGILPPKILNIEVCSKLALTGAIRDILVG 240

Query: 241 ------WFKTLVD----------------HSSLDCFYI-----------------FI--- 283
                 +  T+++                 SSL+C                    FI   
Sbjct: 241 ERVIVQYLLTILNSSDKYKKWASLSATNCDSSLECSTCSNSESQKRGYPSDHTQDFIVND 300

[Close]

BLAST of Sed0026226 vs. ExPASy TrEMBL
Match: A0A6J1HE44 (DAR GTPase 2, mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462723 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 5.2e-50
Identity = 155/368 (42.12%), Postives = 190/368 (51.63%), Query Frame = 0


Query: 1   MVAANLMSRIC-----AAIGNRTAGGFDDPHTAAA-----ERIPAVDFVLEVRDARDYYC 60
           M AA LM +I      AA+G+R + G+ DPH AAA     ERIP VDFVLEVRDAR    
Sbjct: 1   MAAATLMRKIGSAINEAALGSRISSGWYDPHMAAASRAVVERIPLVDFVLEVRDARIP-- 60

Query: 61  EGWKESVYERMKDYSTSSKRIIVSNKTDL-------DWTRYFNDHNCISYGVNSHNKENT 120
              K S YE MK+Y  SSKRII+ NKTDL        WTR+F DHNCISYGVNSHNKEN 
Sbjct: 61  ---KTSEYELMKNYPLSSKRIIILNKTDLADRSQTEAWTRFFEDHNCISYGVNSHNKENI 120

Query: 121 RELNHQSTEKLKPMGCGKFNYVSQHSP--LTCGLRN-----LRNALQSVGELE--NYGKL 180
           RE       +++ +   K +  S H+   +  G+ N     L N+L  +G +     GKL
Sbjct: 121 REFLTFLQARVREL---KKSGHSSHATTMMLVGIPNVGKSALANSLHQIGRISAAEKGKL 180

Query: 181 KHAIVSPRLDETKYISSLKY--HPTLY-----------HQGLIICNRSNCFLPIQD---- 240
           K+AIVSP+  ETK ISSLK   HP +Y              + +C++      I+D    
Sbjct: 181 KNAIVSPQPGETKNISSLKIASHPNIYVLDTPGIFPPKILNIEVCSKLALTGAIRDILVG 240

Query: 241 --------------------WFKTLVDHSSLDCFY-----------------------IF 283
                               W       S L+C                         + 
Sbjct: 241 EQLLVQYLLTLINSSDKYKKWGNLSATDSLLECSTCPSLEKQKRGYPSDHTQDIIVNDVR 300

[Close]

BLAST of Sed0026226 vs. ExPASy TrEMBL
Match: A0A6J1KB62 (DAR GTPase 2, mitochondrial isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492297 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 5.8e-49
Identity = 156/368 (42.39%), Postives = 188/368 (51.09%), Query Frame = 0


Query: 1   MVAANLMSRIC-----AAIGNRTAGGFDDPHTAAA-----ERIPAVDFVLEVRDARDYYC 60
           M AA LM +I      AAIG+R   G+ DPH AAA     ERIP VDFVLEVRDAR    
Sbjct: 1   MDAATLMRKIGSAINEAAIGSRITSGWYDPHMAAASRAVVERIPLVDFVLEVRDARIP-- 60

Query: 61  EGWKESVYERMKDYSTSSKRIIVSNKTDL-------DWTRYFNDHNCISYGVNSHNKENT 120
              K S YE MK+Y  SSKRII+ NKTDL        WTR F DHNCISYGVNSHNKEN 
Sbjct: 61  ---KTSEYELMKNYLPSSKRIIILNKTDLADRSQTEAWTRLFEDHNCISYGVNSHNKENI 120

Query: 121 RELNHQSTEKLKPMGCGKFNYVSQHSP--LTCGLRN-----LRNALQSVGELE--NYGKL 180
           RE       +++ +   K +  S H+   +  G+ N     L N+L  +G +     GKL
Sbjct: 121 REFLTFLQARVREL---KKSGHSSHATTMMLVGIPNVGKSALANSLHQIGRISAAEKGKL 180

Query: 181 KHAIVSPRLDETKYISSLKY--HPTLY-----------HQGLIICNRSNCFLPIQD---- 240
           K+AIVSP+  ETK ISSLK   HP +Y              + +C++      I+D    
Sbjct: 181 KNAIVSPQPGETKNISSLKIASHPNIYVLDTPGIFPPKILNIEVCSKLALTGAIRDILVG 240

Query: 241 --------------------WFKTLVDHSSLDCFY-----------------------IF 283
                               W       S L+C                         + 
Sbjct: 241 EQVLVQFLLTLINSSDKYKKWGNLSATDSLLECSTCSSLEKRKRGYPSDHTQDIIVNDVR 300

[Close]

BLAST of Sed0026226 vs. ExPASy TrEMBL
Match: A0A1S3BA35 (DAR GTPase 2, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487836 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 3.2e-47
Identity = 154/366 (42.08%), Postives = 188/366 (51.37%), Query Frame = 0


Query: 1   MVAANLMSRICAAI-----GNRTAGGFDDPHTAA-----AERIPAVDFVLEVRDARDYYC 60
           M AA LM +I  AI     GNR + G+ D H AA     AERIP VDFVLEVRDAR    
Sbjct: 1   MAAATLMRKIGTAINELAAGNRISSGWYDAHMAAASRAVAERIPLVDFVLEVRDARIP-- 60

Query: 61  EGWKESVYERMKDYSTSSKRIIVSNKTDLD-------WTRYFNDHNCISYGVNSHNKENT 120
                S YE MK++  SSKRIIV NKTDL        WTRYF DHNCISY VNSHNKEN 
Sbjct: 61  ---MSSEYEMMKNHPPSSKRIIVLNKTDLADQLQTEVWTRYFEDHNCISYCVNSHNKENI 120

Query: 121 RELNHQSTEKLKPMGCGKFNYVSQHSP--LTCGLRN-----LRNALQSVGELE--NYGKL 180
           RE  +    +++ +   K +  S H+   +  G+ N     L N+L  +G +     GKL
Sbjct: 121 REFLNFLQSRVREL---KRSGHSSHATTMMLVGIPNVGKSALANSLHQIGRISAAEKGKL 180

Query: 181 KHAIVSPRLDETKYISSLKY--HPTLY-----------HQGLIICNRSNCFLPIQD---- 240
           KHA+VS +  ETK ISSLK   HP +Y              + +C++      I+D    
Sbjct: 181 KHAVVSSQPGETKNISSLKIASHPNVYVLDTPGIFPPKIDNIEVCSKLALTGAIRDILVG 240

Query: 241 ------WFKTLVDH------------SSLDCF-----------------------YIFII 283
                 +  T+V+             SSL+C                         +   
Sbjct: 241 EHVIVQYLLTIVNSSVKYKKWANLSASSLECSTPSSLEKQKRRYPSDHTQDIIVNEVRRS 300

[Close]

BLAST of Sed0026226 vs. ExPASy TrEMBL
Match: A0A0A0LNT3 (G domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G354730 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 5.4e-47
Identity = 152/366 (41.53%), Postives = 190/366 (51.91%), Query Frame = 0


Query: 1   MVAANLMSRICAAI-----GNRTAGGFDDPH-----TAAAERIPAVDFVLEVRDARDYYC 60
           M AA LM +I  AI     GNR + G+ D H      A AERIP VDFVLEVRDAR    
Sbjct: 1   MAAATLMRKIGTAINQLAAGNRISSGWYDAHMEAASRAVAERIPLVDFVLEVRDARIP-- 60

Query: 61  EGWKESVYERMKDYSTSSKRIIVSNKTDLD-------WTRYFNDHNCISYGVNSHNKENT 120
                S YE MK++  SSKRIIV NKTDL        WTR+F DHNCISYGVNSHNKEN 
Sbjct: 61  ---TSSEYEMMKNHPPSSKRIIVLNKTDLADQSQTEVWTRHFEDHNCISYGVNSHNKENI 120

Query: 121 RELNHQSTEKLKPMGCGKFNYVSQHSP--LTCGLRN-----LRNALQSVGELE--NYGKL 180
           RE  +    +++ +   K +  S H+   +  G+ N     L N+L  +G +     GKL
Sbjct: 121 REFLNFLQARVREL---KKSGHSSHATTMMLVGIPNVGKSALANSLHQIGRISAAEKGKL 180

Query: 181 KHAIVSPRLDETKYISSLKY--HPTLY-----------HQGLIICNRSNCFLPIQD---- 240
           KHA+VS +  ETK ISSLK   HP +Y              + +C++      I+D    
Sbjct: 181 KHAVVSSQPGETKNISSLKIASHPNIYVLDTPGIFPPKIDDIEVCSKLALTGAIRDILVG 240

Query: 241 ------WFKTLVDHS------------SLDCF-----------------------YIFII 283
                 +  T+V+ S            SL+C                         +   
Sbjct: 241 EHVIVQYLLTIVNSSVKYKKWANLSAISLECSTPSNLEKQRRRYPSDHTQDITVNEVRRA 300

[Close]

BLAST of Sed0026226 vs. TAIR 10
Match: AT4G10650.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 127.9 bits (320), Expect = 1.3e-29
Identity = 121/340 (35.59%), Postives = 152/340 (44.71%), Query Frame = 0


Query: 25  PHTAAA-----ERIPAVDFVLEVRDARDYYCEGWKESVYERMKDYS-TSSKRIIVSNKTD 84
           PH AAA     ERIP VDFVLE+RDAR         S YE ++ +S   SKRIIV NK +
Sbjct: 31  PHMAAAVRAISERIPLVDFVLEIRDARIPL-----SSEYELLRKFSPLPSKRIIVLNKME 90

Query: 85  L-------DWTRYFNDHNCISYGVNSHNKENTRE----LNHQSTEKLKPMGCGKFNYVSQ 144
           L           YF + N +SY VNSHNK+  ++    L  Q  E  K    G    +  
Sbjct: 91  LADPLELKKCIDYFEERNYLSYAVNSHNKDCVKQLLNFLQSQVRELHKAGHSGHTTTMML 150

Query: 145 HSPLTCGLRNLRNALQSVGELE--NYGKLKHAIVSPRLDETKYISSLKY--HPTLY---H 204
                 G   L N+L  +G +     GKLKH  VS +  +TK I SLK   HP +Y    
Sbjct: 151 LGIPNVGKSALSNSLHHIGRISAAEKGKLKHTTVSSQPGDTKDIMSLKIGSHPNVYVLDT 210

Query: 205 QGLI--------ICNR-----------------SNCFLPI----------------QDWF 264
            G+         IC +                 +  FL I                QD  
Sbjct: 211 PGIFPPNLYDAEICAKLALTGAIPDDIVGELKLARLFLTILNSSHEYKKWAKLCKSQDLT 270

Query: 265 KTLVDHSS-----------LDCFYIFI------ILFNTISSSDGNLDHERDMRNLIGTLL 283
           ++L D SS            D    FI      +L+ TIS+ DGNL+ E  M NLI T  
Sbjct: 271 ESLSDESSKSDAKHKRQYATDHTQDFIVYDVRRVLYETISAFDGNLEDEISMGNLIETQF 330

[Close]

BLAST of Sed0026226 vs. TAIR 10
Match: AT2G41670.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 50.8 bits (120), Expect = 2.0e-06
Identity = 27/66 (40.91%), Postives = 40/66 (60.61%), Query Frame = 0


Query: 217 LFNTISSSDGNLDHERDMRNLIGTLLIALHKALHVPSDFSNDASIKVASKLLNLYRTWRL 276
           L+ T+S  DG+ + E D+  LI      L KAL +P   +++A + V+ K L L+RT RL
Sbjct: 304 LYITLSEFDGDTEDENDLECLIEQQFEVLQKALKIPHK-ASEARLMVSKKFLTLFRTGRL 363

Query: 277 GHYILD 283
           G +ILD
Sbjct: 364 GPFILD 368

The following BLAST results are available for this feature:

BLAST of Sed0026226 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022962198.1	1.1e-49	42.12	DAR GTPase 2, mitochondrial isoform X1 [Cucurbita moschata]	[more]
XP_022146907.1	1.1e-49	42.70	DAR GTPase 2, mitochondrial isoform X1 [Momordica charantia]	[more]
KAG6598334.1	1.8e-49	42.66	DAR GTPase 2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023546448.1	2.4e-49	42.66	DAR GTPase 2, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_038884377.1	4.1e-49	42.78	DAR GTPase 2, mitochondrial [Benincasa hispida]	[more]

BLAST of Sed0026226 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82497	1.9e-28	35.59	DAR GTPase 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=DGP2 PE=3 SV=1	[more]
Q8L607	2.9e-05	40.91	Short integuments 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SIN2 PE=1 ...	[more]

BLAST of Sed0026226 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D0W3	5.2e-50	42.70	DAR GTPase 2, mitochondrial isoform X1 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1HE44	5.2e-50	42.12	DAR GTPase 2, mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A6J1KB62	5.8e-49	42.39	DAR GTPase 2, mitochondrial isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1114922...	[more]
A0A1S3BA35	3.2e-47	42.08	DAR GTPase 2, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487836 P...	[more]
A0A0A0LNT3	5.4e-47	41.53	G domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G354730 PE=4 SV=1	[more]

BLAST of Sed0026226 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10650.1	1.3e-29	35.59	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT2G41670.1	2.0e-06	40.91	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 27..179 e-value: 1.1E-5 score: 27.5
None	No IPR available	PANTHER	PTHR45782:SF1	DAR GTPASE 2, MITOCHONDRIAL	coord: 216..282
None	No IPR available	PANTHER	PTHR45782	MITOCHONDRIAL RIBOSOME-ASSOCIATED GTPASE 1	coord: 216..282
None	No IPR available	PANTHER	PTHR45782:SF1	DAR GTPASE 2, MITOCHONDRIAL	coord: 20..179
None	No IPR available	PANTHER	PTHR45782	MITOCHONDRIAL RIBOSOME-ASSOCIATED GTPASE 1	coord: 20..179

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0026226.1	Sed0026226.1	mRNA