Homology
BLAST of Sed0026170 vs. NCBI nr
Match:
XP_023548152.1 (ATP-dependent RNA helicase DEAH13 isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 2203.7 bits (5709), Expect = 0.0e+00
Identity = 1140/1322 (86.23%), Postives = 1210/1322 (91.53%), Query Frame = 0
Query: 1 MEDLLNDQLDCGNGSWSMDSGGSNQVIMYGSKKSDKKRKNMNKGCKGIQINKKPKLSKSQ 60
MEDL+NDQLDCG GSWSMD GGSNQVI+YGSKKSDKKRKNMNKGCKG QINKKPKLSKSQ
Sbjct: 1 MEDLVNDQLDCGKGSWSMDGGGSNQVILYGSKKSDKKRKNMNKGCKGTQINKKPKLSKSQ 60
Query: 61 KKKVMKLEEEKEKSLLLSKSLGMLEKYKIPDDAFLLLRSTVSIGQSETRLGKRSRDIQFS 120
KKK+MKLEEEKEKSLLLSKSL LEKYKIPDDAFLLLRS+V+IGQ ETRL KRSRDIQFS
Sbjct: 61 KKKMMKLEEEKEKSLLLSKSLETLEKYKIPDDAFLLLRSSVNIGQDETRLEKRSRDIQFS 120
Query: 121 KVGIEVPRNDHQLDKTDPDT--HENHFGSPDISPWHQLSAKVDEVLPFVSKREVSCGLDS 180
KVGIE PRN+ Q +KT DT E+H GS +ISP HQLSA+ DE P + KREVSCGLDS
Sbjct: 121 KVGIEFPRNEQQWEKTCSDTSQDESHLGSLEISPRHQLSAEADEDCPCIEKREVSCGLDS 180
Query: 181 CQDLDNGTIVSNQGEVLSSLPNEDENICTLALEDGRDLSSAMCPDGGFKGPEIPDKKNVI 240
QDLD+G +VSNQG+ LS+LP+E ENIC + LE GRDLS C DG FKGPEI DK++ I
Sbjct: 181 FQDLDSGNVVSNQGKSLSALPDEVENICAVVLESGRDLSCTPCTDGDFKGPEIMDKRDEI 240
Query: 241 PNVETCKTYDPLPKLRLLSRPIVVPVLRPPEVEDRRKDLPIVMMEQEIMEAINENPIVII 300
P VE C T DPLP+LRLLSRPIVVPV RP EVED+RKDLPIVMMEQEIMEAINENPIVII
Sbjct: 241 PKVEICTTSDPLPELRLLSRPIVVPVSRPCEVEDKRKDLPIVMMEQEIMEAINENPIVII 300
Query: 301 CGETGCGKTTQVPQFLYEAGFGSLQSGHQRGTIGVTQPRRVAVLATAKRVAYELNVHLGK 360
CGETGCGKTTQVPQFLYEAGFGSLQS HQRGTIGVTQPRRVAVLATAKRVAYEL VHLGK
Sbjct: 301 CGETGCGKTTQVPQFLYEAGFGSLQSSHQRGTIGVTQPRRVAVLATAKRVAYELGVHLGK 360
Query: 361 EVGFQVRYDKKIGDSSSIKFMTDGILLREVQHDFLLKRYSVLILDEAHERSMNTDILIGM 420
EVGFQVRYDKKIG SSSIKFMTDGILLREVQHDFLLKRYSVLILDEAHERSMNTDILIGM
Sbjct: 361 EVGFQVRYDKKIGGSSSIKFMTDGILLREVQHDFLLKRYSVLILDEAHERSMNTDILIGM 420
Query: 421 LSRVVKLRQDLHMKQQQMMLSGDNISPENMIFPLKLVLMSATLRVEDFISGGRLFHVSPP 480
LSRVVKLRQDLHMKQ+Q+MLSG ISPE+MIFPLKLVLMSATLRVEDFISGGRLFHVSPP
Sbjct: 421 LSRVVKLRQDLHMKQRQIMLSGGEISPEDMIFPLKLVLMSATLRVEDFISGGRLFHVSPP 480
Query: 481 IIEVPTRQYPVTVHFSRRTDTVDYIGQAYKKVLAIHKKLPPGGILVFVTGQREVENLCKK 540
+IEVPTRQYPVTVHFSRRTDTVDYIGQAYKKVLAIHKKLPPGGILVFVTGQREVEN+CKK
Sbjct: 481 VIEVPTRQYPVTVHFSRRTDTVDYIGQAYKKVLAIHKKLPPGGILVFVTGQREVENMCKK 540
Query: 541 LREASKKLIMKTSKKNVGNNNDNVEMNSIQNLDMKEINEAFEDNEISTGEQTDRFSSYDK 600
LREASKKLI KTS++NVG N +EMNSIQNLDMKEINEAFED+E S GEQTDRFSS DK
Sbjct: 541 LREASKKLIKKTSERNVGIGNGAIEMNSIQNLDMKEINEAFEDHEFSAGEQTDRFSSCDK 600
Query: 601 DDFDINDDLSDASYNSETDSELEFDEDDLMLDENDGNLTDVLREDVNLASLKAAFDALDG 660
D+FD+NDD SDASYNSETDSELEF EDD + DE+DGNLTDVLRED ++ASLKAAFDALD
Sbjct: 601 DEFDVNDDASDASYNSETDSELEFSEDDALFDEDDGNLTDVLREDASMASLKAAFDALDE 660
Query: 661 KTAFDFDKIPSEQSKEEKSSAKQCGSVRMKEKGELDFSVGALHVLPLYAMLPATSQLRVF 720
K A FDKI + S + + AK+ S RMKE GEL F VGALHVLPLYAMLPA +QLRVF
Sbjct: 661 KVA--FDKIQVDHSTKGELPAKRV-SARMKENGELGFLVGALHVLPLYAMLPAAAQLRVF 720
Query: 721 EEVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKTYNSSNGIENYEVQWISKASAA 780
EEVKEG+RLVV+ATNVAETSLTIPGIKYVVDTGREKVKTYNSSNGIENYE+QWISKASAA
Sbjct: 721 EEVKEGDRLVVIATNVAETSLTIPGIKYVVDTGREKVKTYNSSNGIENYEIQWISKASAA 780
Query: 781 QRAGRAGRTGPGHCYRLYSSAVFSNIFPDFSLAEIAKVPVDGVVLLMKSMGISKVVNFPF 840
QRAGRAGRTGPGHCYRLYSSAVFSNIFPDFSLAEIAK+PVDGVVLLMKSMGISKVVNFPF
Sbjct: 781 QRAGRAGRTGPGHCYRLYSSAVFSNIFPDFSLAEIAKIPVDGVVLLMKSMGISKVVNFPF 840
Query: 841 PTPPETSAVLEAESCLKALEALDSDGRLTPLGKAMARYPLSPRHSRMLLTVIQIMKTLKN 900
PTPPETSAVLEAESCLKALEALD+DGRLTPLGKAMARYPLSPRHSRMLLTVIQIM+ LK
Sbjct: 841 PTPPETSAVLEAESCLKALEALDNDGRLTPLGKAMARYPLSPRHSRMLLTVIQIMRNLKT 900
Query: 901 YERANLVLAYSVAAAAALSMSNPFAIMFEGSQMKDDLEQNDRSSERADTKAEEKVEKSLK 960
Y+RANLVLAYSVAAAAALS SNPF +MFEGSQ+KDDLEQ DRS E ADTKAEEKVEKSLK
Sbjct: 901 YDRANLVLAYSVAAAAALSTSNPFVMMFEGSQVKDDLEQYDRSLELADTKAEEKVEKSLK 960
Query: 961 KKLKEAGKLSREKFSNPSCDALTIAYALQCFELSGSPAEFCNNYTLHLKTMQEMSKLRKQ 1020
KKLKEAGKLSREKFSNP+ DALTIAYALQCFELS SP FCN +TLHLKTMQEMSKLRKQ
Sbjct: 961 KKLKEAGKLSREKFSNPTSDALTIAYALQCFELSESPVAFCNTHTLHLKTMQEMSKLRKQ 1020
Query: 1021 LLQLVFNHNGSSSAEFDFSWTSGTLEHVEDAWRIPSNKHPLSLNEEGIIGQAICAGWPDR 1080
LLQLVFNH+GS+ A+ DFSWT+GTLE VE+ WRIPSNKHPLSLNEE IIGQAICAGWPDR
Sbjct: 1021 LLQLVFNHSGSAIADSDFSWTNGTLEDVENVWRIPSNKHPLSLNEEEIIGQAICAGWPDR 1080
Query: 1081 VAKRIREISKSADGDRRERTGKYQACMVKEAVFLHRRSSVSRSAPEFVVYNELLHTKRPY 1140
VAKRIREISKS + DR+ERTGKYQACMVKE VFL+RRSSVSRSAPEF+VYNELL TKRPY
Sbjct: 1081 VAKRIREISKSTEDDRKERTGKYQACMVKENVFLNRRSSVSRSAPEFLVYNELLCTKRPY 1140
Query: 1141 MHGLTSVKPDWLVKYASSLCAFSAPLTDPRPYYEPRNDTVFAWVAPAFGPHLWKLPLHNV 1200
MHGLTSVKP+WLVKYASSLC FSAPLTDPRPYY+P+NDTVF+WVAP FGPHLWKLPLHN
Sbjct: 1141 MHGLTSVKPNWLVKYASSLCTFSAPLTDPRPYYDPQNDTVFSWVAPTFGPHLWKLPLHNA 1200
Query: 1201 PIKDDVHGVGVFGCALLEGNVLPCLKSVRKFMAAPPSSILRPEALGQKRVGNLLSRLKSK 1260
PIKD+ HGV VF CALLEGNVLPCLK VRKFMAAPPSSILRPEALGQKRVGNLLSRLKSK
Sbjct: 1201 PIKDNAHGVAVFACALLEGNVLPCLKYVRKFMAAPPSSILRPEALGQKRVGNLLSRLKSK 1260
Query: 1261 KIKSCATLREAWNDNPYELHSEILDWFQESYHSHFEELWSKMLCEVQEPQKRLSKKLKRA 1320
KI SCATLR W DNPYELHSEILDWFQESYHSHFE+LWS+MLCEVQEP +RLS+KLKRA
Sbjct: 1261 KINSCATLRVVWKDNPYELHSEILDWFQESYHSHFEDLWSQMLCEVQEPPERLSRKLKRA 1319
BLAST of Sed0026170 vs. NCBI nr
Match:
XP_022953700.1 (ATP-dependent RNA helicase DEAH13 [Cucurbita moschata])
HSP 1 Score: 2198.3 bits (5695), Expect = 0.0e+00
Identity = 1136/1322 (85.93%), Postives = 1212/1322 (91.68%), Query Frame = 0
Query: 1 MEDLLNDQLDCGNGSWSMDSGGSNQVIMYGSKKSDKKRKNMNKGCKGIQINKKPKLSKSQ 60
MEDL+NDQLDCG GSWSMD GGSNQVI+YGSKKSDKKRKNMNKGCKG QINKKPKLSKSQ
Sbjct: 1 MEDLVNDQLDCGKGSWSMDGGGSNQVILYGSKKSDKKRKNMNKGCKGTQINKKPKLSKSQ 60
Query: 61 KKKVMKLEEEKEKSLLLSKSLGMLEKYKIPDDAFLLLRSTVSIGQSETRLGKRSRDIQFS 120
KKK+MKLEEEKEKSLLLSKSL LEKYKIPDDAFLLLRS+V+IGQ ETRL KRSR+IQFS
Sbjct: 61 KKKMMKLEEEKEKSLLLSKSLETLEKYKIPDDAFLLLRSSVNIGQDETRLEKRSRNIQFS 120
Query: 121 KVGIEVPRNDHQLDKTDPDT--HENHFGSPDISPWHQLSAKVDEVLPFVSKREVSCGLDS 180
KVGIE PRN+ QL+KT DT HE+H GS +ISP HQLSA+ DE P + KREVS GLDS
Sbjct: 121 KVGIEFPRNEQQLEKTCSDTSQHESHLGSLEISPRHQLSAEADEDCPCIEKREVSSGLDS 180
Query: 181 CQDLDNGTIVSNQGEVLSSLPNEDENICTLALEDGRDLSSAMCPDGGFKGPEIPDKKNVI 240
Q+LD+G +VSNQG+ LS+LP+E ENIC + LE GRDLS C +G FKGPEI DK++ I
Sbjct: 181 FQNLDSGNVVSNQGKSLSALPDEVENICAVVLESGRDLSCTTCMNGDFKGPEIMDKRDEI 240
Query: 241 PNVETCKTYDPLPKLRLLSRPIVVPVLRPPEVEDRRKDLPIVMMEQEIMEAINENPIVII 300
P VE C T DPLP+LRLLSRPIVVPVLRP EVED+RKDLPIVMMEQEIMEAINENPIVII
Sbjct: 241 PKVEICTTSDPLPELRLLSRPIVVPVLRPCEVEDKRKDLPIVMMEQEIMEAINENPIVII 300
Query: 301 CGETGCGKTTQVPQFLYEAGFGSLQSGHQRGTIGVTQPRRVAVLATAKRVAYELNVHLGK 360
CGETGCGKTTQVPQFLYEAGFGSLQS HQRGTIGVTQPRRVAVLATAKRVAYEL VHLGK
Sbjct: 301 CGETGCGKTTQVPQFLYEAGFGSLQSSHQRGTIGVTQPRRVAVLATAKRVAYELGVHLGK 360
Query: 361 EVGFQVRYDKKIGDSSSIKFMTDGILLREVQHDFLLKRYSVLILDEAHERSMNTDILIGM 420
EVGFQVRYDKKIG SSSIKFMTDGILLREVQHDFLLKRYSVLILDEAHERSMNTDILIGM
Sbjct: 361 EVGFQVRYDKKIGGSSSIKFMTDGILLREVQHDFLLKRYSVLILDEAHERSMNTDILIGM 420
Query: 421 LSRVVKLRQDLHMKQQQMMLSGDNISPENMIFPLKLVLMSATLRVEDFISGGRLFHVSPP 480
LSRVVKLRQDLHMKQ+Q+MLSG ISPE+MIFPLKLVLMSATLRVEDFISGGRLFHVSPP
Sbjct: 421 LSRVVKLRQDLHMKQRQIMLSGGEISPEDMIFPLKLVLMSATLRVEDFISGGRLFHVSPP 480
Query: 481 IIEVPTRQYPVTVHFSRRTDTVDYIGQAYKKVLAIHKKLPPGGILVFVTGQREVENLCKK 540
IIEVPTRQYPVTVHFSRRTDTVDYIGQAYKKVLAIHKKLPPGGILVFVTGQREVEN+CKK
Sbjct: 481 IIEVPTRQYPVTVHFSRRTDTVDYIGQAYKKVLAIHKKLPPGGILVFVTGQREVENMCKK 540
Query: 541 LREASKKLIMKTSKKNVGNNNDNVEMNSIQNLDMKEINEAFEDNEISTGEQTDRFSSYDK 600
LREASKKLI KTS++NVG +N +EMNSIQNLDMKEINEAFED+E S GEQTDRFSS DK
Sbjct: 541 LREASKKLIKKTSERNVGIDNGAIEMNSIQNLDMKEINEAFEDHEFSAGEQTDRFSSCDK 600
Query: 601 DDFDINDDLSDASYNSETDSELEFDEDDLMLDENDGNLTDVLREDVNLASLKAAFDALDG 660
D+FD+NDD SDASYNSETDSELEF EDD + DE+DGNLTDVLRED ++ASLKAAFDALD
Sbjct: 601 DEFDVNDDASDASYNSETDSELEFSEDDALFDEDDGNLTDVLREDASMASLKAAFDALDE 660
Query: 661 KTAFDFDKIPSEQSKEEKSSAKQCGSVRMKEKGELDFSVGALHVLPLYAMLPATSQLRVF 720
K A FDKI + S + + AK+ S RMKE GEL F VGALHVLPLYAMLPA +QLRVF
Sbjct: 661 KVA--FDKIQVDHSTKGELPAKRV-SARMKENGELGFLVGALHVLPLYAMLPAAAQLRVF 720
Query: 721 EEVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKTYNSSNGIENYEVQWISKASAA 780
EEVKEG+RLVV+ATNVAETSLTIPGIKYVVDTGREKVKTYNSSNGIENYE+QWISKASAA
Sbjct: 721 EEVKEGDRLVVIATNVAETSLTIPGIKYVVDTGREKVKTYNSSNGIENYEIQWISKASAA 780
Query: 781 QRAGRAGRTGPGHCYRLYSSAVFSNIFPDFSLAEIAKVPVDGVVLLMKSMGISKVVNFPF 840
QRAGRAGRTGPGHCYRLYSSAVFSNIFPDFSLAEIAK+PVDGVVLLMKSMGISKVVNFPF
Sbjct: 781 QRAGRAGRTGPGHCYRLYSSAVFSNIFPDFSLAEIAKIPVDGVVLLMKSMGISKVVNFPF 840
Query: 841 PTPPETSAVLEAESCLKALEALDSDGRLTPLGKAMARYPLSPRHSRMLLTVIQIMKTLKN 900
PTPPETSAVLEAESCLKALEALD+DGRLTPLGKAMARYPLSPRHSRMLLTVIQIM+ LK
Sbjct: 841 PTPPETSAVLEAESCLKALEALDNDGRLTPLGKAMARYPLSPRHSRMLLTVIQIMRNLKT 900
Query: 901 YERANLVLAYSVAAAAALSMSNPFAIMFEGSQMKDDLEQNDRSSERADTKAEEKVEKSLK 960
Y+RANLVLAYSVAAAAALS SNPF +MFEGSQ+KDDLEQ DRS E ADTKAEEKVEKSLK
Sbjct: 901 YDRANLVLAYSVAAAAALSTSNPFVMMFEGSQVKDDLEQYDRSLELADTKAEEKVEKSLK 960
Query: 961 KKLKEAGKLSREKFSNPSCDALTIAYALQCFELSGSPAEFCNNYTLHLKTMQEMSKLRKQ 1020
KKLKEAGKLSREKFSNP+ DALTIAYALQCFELS S FCN YTLHLKTMQEMSKLRKQ
Sbjct: 961 KKLKEAGKLSREKFSNPTSDALTIAYALQCFELSESSVAFCNTYTLHLKTMQEMSKLRKQ 1020
Query: 1021 LLQLVFNHNGSSSAEFDFSWTSGTLEHVEDAWRIPSNKHPLSLNEEGIIGQAICAGWPDR 1080
LLQLVFNH+GS+ A+ DFSWT+GTLE VE+ WRIPSNKHPL LNEE IIGQAICAGWPDR
Sbjct: 1021 LLQLVFNHSGSAIADSDFSWTNGTLEDVENVWRIPSNKHPLLLNEEEIIGQAICAGWPDR 1080
Query: 1081 VAKRIREISKSADGDRRERTGKYQACMVKEAVFLHRRSSVSRSAPEFVVYNELLHTKRPY 1140
VAKRIREISKS + DR+ERTGKYQACMVKE VFL+RRSSVSRSAPEF+VYNELL TK+PY
Sbjct: 1081 VAKRIREISKSTEDDRKERTGKYQACMVKENVFLNRRSSVSRSAPEFLVYNELLRTKQPY 1140
Query: 1141 MHGLTSVKPDWLVKYASSLCAFSAPLTDPRPYYEPRNDTVFAWVAPAFGPHLWKLPLHNV 1200
MHGLTSVKP+WLVKYASSLC FSAPLTDPRPYY+P+NDTVF+WVAP FGPHLWKLPLHN
Sbjct: 1141 MHGLTSVKPNWLVKYASSLCTFSAPLTDPRPYYDPQNDTVFSWVAPTFGPHLWKLPLHNA 1200
Query: 1201 PIKDDVHGVGVFGCALLEGNVLPCLKSVRKFMAAPPSSILRPEALGQKRVGNLLSRLKSK 1260
PIKD+ HGV VF CALLEGNVLPCLK+VRKFMAAPPSSILRPEALGQKRVGNLLSRLKSK
Sbjct: 1201 PIKDNAHGVAVFACALLEGNVLPCLKNVRKFMAAPPSSILRPEALGQKRVGNLLSRLKSK 1260
Query: 1261 KIKSCATLREAWNDNPYELHSEILDWFQESYHSHFEELWSKMLCEVQEPQKRLSKKLKRA 1320
KI SCATLR W DNPYELHSEILDWFQESYHSHFE+LWS+MLCE++EP +RLS+KLKRA
Sbjct: 1261 KINSCATLRVVWKDNPYELHSEILDWFQESYHSHFEDLWSQMLCEIREPPERLSRKLKRA 1319
BLAST of Sed0026170 vs. NCBI nr
Match:
XP_022991216.1 (ATP-dependent RNA helicase DEAH13 [Cucurbita maxima])
HSP 1 Score: 2194.9 bits (5686), Expect = 0.0e+00
Identity = 1134/1322 (85.78%), Postives = 1206/1322 (91.23%), Query Frame = 0
Query: 1 MEDLLNDQLDCGNGSWSMDSGGSNQVIMYGSKKSDKKRKNMNKGCKGIQINKKPKLSKSQ 60
MEDL+NDQLDCG GSWS+D GGSNQVI+YGSKKSDKKRKN+NKGCKG QINKKPKLSKSQ
Sbjct: 1 MEDLVNDQLDCGKGSWSLDGGGSNQVILYGSKKSDKKRKNINKGCKGTQINKKPKLSKSQ 60
Query: 61 KKKVMKLEEEKEKSLLLSKSLGMLEKYKIPDDAFLLLRSTVSIGQSETRLGKRSRDIQFS 120
KKK+MKLE EKEKSLLLSKSL LEKYKIPDDAFLLLRS+VSIGQ ETRL KRSRDIQFS
Sbjct: 61 KKKMMKLEVEKEKSLLLSKSLETLEKYKIPDDAFLLLRSSVSIGQDETRLEKRSRDIQFS 120
Query: 121 KVGIEVPRNDHQLDKTDPDT--HENHFGSPDISPWHQLSAKVDEVLPFVSKREVSCGLDS 180
KVGIE PRN+ QL+KT DT HE+H GS +ISP HQLSA+ DE P + KREVSCGLDS
Sbjct: 121 KVGIEFPRNEQQLEKTCSDTSQHESHLGSLEISPRHQLSAEADEDCPCIEKREVSCGLDS 180
Query: 181 CQDLDNGTIVSNQGEVLSSLPNEDENICTLALEDGRDLSSAMCPDGGFKGPEIPDKKNVI 240
QDLD G +VSNQG+ LS+LP+E ENIC + LE GRDLS C DG FKGPEI D+++ I
Sbjct: 181 FQDLDGGNVVSNQGKSLSALPDEVENICAVVLESGRDLSCTTCTDGDFKGPEIMDERDKI 240
Query: 241 PNVETCKTYDPLPKLRLLSRPIVVPVLRPPEVEDRRKDLPIVMMEQEIMEAINENPIVII 300
P VE C T DPLP+LRLLSRPIVVPV RP EVED+RKDLPIVMMEQEIMEAINENPIVII
Sbjct: 241 PKVEICTTSDPLPELRLLSRPIVVPVSRPCEVEDKRKDLPIVMMEQEIMEAINENPIVII 300
Query: 301 CGETGCGKTTQVPQFLYEAGFGSLQSGHQRGTIGVTQPRRVAVLATAKRVAYELNVHLGK 360
CGETGCGKTTQVPQFLYEAGFGS QS HQRGTIGVTQPRRVAVLATAKRVAYEL VHLGK
Sbjct: 301 CGETGCGKTTQVPQFLYEAGFGSFQSSHQRGTIGVTQPRRVAVLATAKRVAYELGVHLGK 360
Query: 361 EVGFQVRYDKKIGDSSSIKFMTDGILLREVQHDFLLKRYSVLILDEAHERSMNTDILIGM 420
EVGFQVRYDKKIG SSSIKFMTDGILLREVQHDFLLKRYSVLILDEAHERSMNTDILIGM
Sbjct: 361 EVGFQVRYDKKIGGSSSIKFMTDGILLREVQHDFLLKRYSVLILDEAHERSMNTDILIGM 420
Query: 421 LSRVVKLRQDLHMKQQQMMLSGDNISPENMIFPLKLVLMSATLRVEDFISGGRLFHVSPP 480
LSRVVKLRQDLH+KQ+Q+MLSG ISPE+MIFPLKLVLMSATLRVEDFISGGRLFHVSPP
Sbjct: 421 LSRVVKLRQDLHVKQRQIMLSGGEISPEDMIFPLKLVLMSATLRVEDFISGGRLFHVSPP 480
Query: 481 IIEVPTRQYPVTVHFSRRTDTVDYIGQAYKKVLAIHKKLPPGGILVFVTGQREVENLCKK 540
IIEVPTRQYPVTVHFSRRTDTVDYIGQAYKKVLAIHKKLPPGGILVFVTGQREVEN+CKK
Sbjct: 481 IIEVPTRQYPVTVHFSRRTDTVDYIGQAYKKVLAIHKKLPPGGILVFVTGQREVENMCKK 540
Query: 541 LREASKKLIMKTSKKNVGNNNDNVEMNSIQNLDMKEINEAFEDNEISTGEQTDRFSSYDK 600
LREASKK I KTS++NVG +N +EMNSIQNLDMKEINEAFED+E S GEQTDRFSS DK
Sbjct: 541 LREASKKWIKKTSERNVGIDNGAIEMNSIQNLDMKEINEAFEDHEFSAGEQTDRFSSCDK 600
Query: 601 DDFDINDDLSDASYNSETDSELEFDEDDLMLDENDGNLTDVLREDVNLASLKAAFDALDG 660
D+ D+NDD SDASYNSETDSELEF EDD + DE+DGNLTDVLRED ++ASLKAAFDALDG
Sbjct: 601 DELDVNDDASDASYNSETDSELEFSEDDALFDEDDGNLTDVLREDASMASLKAAFDALDG 660
Query: 661 KTAFDFDKIPSEQSKEEKSSAKQCGSVRMKEKGELDFSVGALHVLPLYAMLPATSQLRVF 720
K A FDKI + S + + AK+ S RMKE GEL F VGALHVLPLYAMLPA +QLRVF
Sbjct: 661 KVA--FDKIQVDHSTKGELPAKRV-SARMKENGELGFLVGALHVLPLYAMLPAAAQLRVF 720
Query: 721 EEVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKTYNSSNGIENYEVQWISKASAA 780
EEVKE +RLVV+ATNVAETSLTIPGIKYVVDTGREKVKTYNSSNGIENYE+QWISKASAA
Sbjct: 721 EEVKERDRLVVIATNVAETSLTIPGIKYVVDTGREKVKTYNSSNGIENYEIQWISKASAA 780
Query: 781 QRAGRAGRTGPGHCYRLYSSAVFSNIFPDFSLAEIAKVPVDGVVLLMKSMGISKVVNFPF 840
QRAGRAGRTGPGHCYRLYSSAVFSNIFPDFSLAEIAK+PVDGVVLLMKSMGISKVVNFPF
Sbjct: 781 QRAGRAGRTGPGHCYRLYSSAVFSNIFPDFSLAEIAKIPVDGVVLLMKSMGISKVVNFPF 840
Query: 841 PTPPETSAVLEAESCLKALEALDSDGRLTPLGKAMARYPLSPRHSRMLLTVIQIMKTLKN 900
PTPPETSAVLEAESCLKALEALD+DGRLTPLGKAMARYPLSPRHSRMLLTVIQIM+ LK
Sbjct: 841 PTPPETSAVLEAESCLKALEALDNDGRLTPLGKAMARYPLSPRHSRMLLTVIQIMRNLKT 900
Query: 901 YERANLVLAYSVAAAAALSMSNPFAIMFEGSQMKDDLEQNDRSSERADTKAEEKVEKSLK 960
Y+RANLVLAY VAAAAALS SNPF +MFEGSQMKDDL+Q DRS E ADTKAEEKVEKSLK
Sbjct: 901 YDRANLVLAYCVAAAAALSTSNPFVMMFEGSQMKDDLDQYDRSLELADTKAEEKVEKSLK 960
Query: 961 KKLKEAGKLSREKFSNPSCDALTIAYALQCFELSGSPAEFCNNYTLHLKTMQEMSKLRKQ 1020
KKLKEAGKLSREKFSNP+ DALTIAYALQCFELS SP FCN YTLHLKTMQEMSKLRKQ
Sbjct: 961 KKLKEAGKLSREKFSNPTSDALTIAYALQCFELSESPVAFCNTYTLHLKTMQEMSKLRKQ 1020
Query: 1021 LLQLVFNHNGSSSAEFDFSWTSGTLEHVEDAWRIPSNKHPLSLNEEGIIGQAICAGWPDR 1080
LLQLVFNH+GS+ A+ DFSWT+GTLE VED WRIPSNKHPL LNEE IIGQAICAGWPDR
Sbjct: 1021 LLQLVFNHSGSAIADSDFSWTNGTLEDVEDVWRIPSNKHPLLLNEEEIIGQAICAGWPDR 1080
Query: 1081 VAKRIREISKSADGDRRERTGKYQACMVKEAVFLHRRSSVSRSAPEFVVYNELLHTKRPY 1140
VAKRIREISKS + DR+ERTGKYQACMVKE VFL+R+SSVSRSAPEF+VYNELL TKRPY
Sbjct: 1081 VAKRIREISKSTEDDRKERTGKYQACMVKENVFLNRQSSVSRSAPEFLVYNELLRTKRPY 1140
Query: 1141 MHGLTSVKPDWLVKYASSLCAFSAPLTDPRPYYEPRNDTVFAWVAPAFGPHLWKLPLHNV 1200
MHGLTSVKP+WLVKYASSLC FSAPLTDPRPYY+P+NDTVF+WVAP FGPHLWKLPLHN
Sbjct: 1141 MHGLTSVKPNWLVKYASSLCTFSAPLTDPRPYYDPQNDTVFSWVAPTFGPHLWKLPLHNA 1200
Query: 1201 PIKDDVHGVGVFGCALLEGNVLPCLKSVRKFMAAPPSSILRPEALGQKRVGNLLSRLKSK 1260
PIKD+ HGV VF CALLEGNVLPCLK VRKF+AAPPSSILRPEALGQKRVGNLLSRLKSK
Sbjct: 1201 PIKDNAHGVAVFACALLEGNVLPCLKYVRKFLAAPPSSILRPEALGQKRVGNLLSRLKSK 1260
Query: 1261 KIKSCATLREAWNDNPYELHSEILDWFQESYHSHFEELWSKMLCEVQEPQKRLSKKLKRA 1320
KI SCATLR W DNPYELHSEILDWFQESYHSHFE+LWS+MLCEVQEP +RLS+KLKRA
Sbjct: 1261 KITSCATLRVVWKDNPYELHSEILDWFQESYHSHFEDLWSQMLCEVQEPPERLSRKLKRA 1319
BLAST of Sed0026170 vs. NCBI nr
Match:
KAG7014343.1 (ATP-dependent RNA helicase DEAH13 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 2190.2 bits (5674), Expect = 0.0e+00
Identity = 1129/1306 (86.45%), Postives = 1198/1306 (91.73%), Query Frame = 0
Query: 1 MEDLLNDQLDCGNGSWSMDSGGSNQVIMYGSKKSDKKRKNMNKGCKGIQINKKPKLSKSQ 60
MEDL+NDQLDCG GSWSMD GGSNQVI+YGSKKSDKKRKNMNKGCKG QINKKPKLSKSQ
Sbjct: 1 MEDLVNDQLDCGKGSWSMDGGGSNQVILYGSKKSDKKRKNMNKGCKGTQINKKPKLSKSQ 60
Query: 61 KKKVMKLEEEKEKSLLLSKSLGMLEKYKIPDDAFLLLRSTVSIGQSETRLGKRSRDIQFS 120
KKK+MKLEEEKEKSLLLSKSL LEKYKIPDDAFLLLRS+V+IGQ ETRL KRSRDIQFS
Sbjct: 61 KKKMMKLEEEKEKSLLLSKSLETLEKYKIPDDAFLLLRSSVNIGQDETRLEKRSRDIQFS 120
Query: 121 KVGIEVPRNDHQLDKTDPDT--HENHFGSPDISPWHQLSAKVDEVLPFVSKREVSCGLDS 180
KVGIE PRN+ QL+KT DT HE+H GS +ISP HQLSA+ DE P + KREVSCGLDS
Sbjct: 121 KVGIEFPRNEQQLEKTCSDTSQHESHLGSLEISPRHQLSAEADEDCPCIEKREVSCGLDS 180
Query: 181 CQDLDNGTIVSNQGEVLSSLPNEDENICTLALEDGRDLSSAMCPDGGFKGPEIPDKKNVI 240
QDLD+G +VSNQG+ LS+LP+E ENIC + LE GRDLS C DG FKGPEI DK++ I
Sbjct: 181 FQDLDSGNVVSNQGKSLSALPDEVENICAVVLESGRDLSCTTCTDGDFKGPEIMDKRDEI 240
Query: 241 PNVETCKTYDPLPKLRLLSRPIVVPVLRPPEVEDRRKDLPIVMMEQEIMEAINENPIVII 300
P VE C T DPLP+LRLLSRPIVVPVLRP EVED+RKDLPIVMMEQEIMEAINENPIVII
Sbjct: 241 PKVEICTTSDPLPELRLLSRPIVVPVLRPCEVEDKRKDLPIVMMEQEIMEAINENPIVII 300
Query: 301 CGETGCGKTTQVPQFLYEAGFGSLQSGHQRGTIGVTQPRRVAVLATAKRVAYELNVHLGK 360
CGETGCGKTTQVPQFLYEAGFGSLQS HQRGTIGVTQPRRVAVLATAKRVAYEL VHLGK
Sbjct: 301 CGETGCGKTTQVPQFLYEAGFGSLQSSHQRGTIGVTQPRRVAVLATAKRVAYELGVHLGK 360
Query: 361 EVGFQVRYDKKIGDSSSIKFMTDGILLREVQHDFLLKRYSVLILDEAHERSMNTDILIGM 420
EVGFQVRYDKKIG SSSIKFMTDGILLREVQHDFLLKRYSVLILDEAHERSMNTDILIGM
Sbjct: 361 EVGFQVRYDKKIGGSSSIKFMTDGILLREVQHDFLLKRYSVLILDEAHERSMNTDILIGM 420
Query: 421 LSRVVKLRQDLHMKQQQMMLSGDNISPENMIFPLKLVLMSATLRVEDFISGGRLFHVSPP 480
LSRVVKLRQDLHMKQ+Q+MLSG ISPE+MIFPLKLVLMSATLRVEDFISGGRLFHVSPP
Sbjct: 421 LSRVVKLRQDLHMKQRQIMLSGGEISPEDMIFPLKLVLMSATLRVEDFISGGRLFHVSPP 480
Query: 481 IIEVPTRQYPVTVHFSRRTDTVDYIGQAYKKVLAIHKKLPPGGILVFVTGQREVENLCKK 540
IIEVPTRQYPVTVHFSRRTDTVDYIGQAYKKVLAIHKKLPPGGILVFVTGQREVEN+CKK
Sbjct: 481 IIEVPTRQYPVTVHFSRRTDTVDYIGQAYKKVLAIHKKLPPGGILVFVTGQREVENMCKK 540
Query: 541 LREASKKLIMKTSKKNVGNNNDNVEMNSIQNLDMKEINEAFEDNEISTGEQTDRFSSYDK 600
LREASKKLI KTS++NVG +N +EMNSIQNLDMKEINEAFED+E S GEQTDRFSS DK
Sbjct: 541 LREASKKLIKKTSERNVGIDNGAIEMNSIQNLDMKEINEAFEDHEFSAGEQTDRFSSCDK 600
Query: 601 DDFDINDDLSDASYNSETDSELEFDEDDLMLDENDGNLTDVLREDVNLASLKAAFDALDG 660
D+FD+NDD SDASYNSETDSELEF EDD + DE+DGNLTDVLRED ++ASLKAAFDALD
Sbjct: 601 DEFDVNDDASDASYNSETDSELEFSEDDALFDEDDGNLTDVLREDASMASLKAAFDALDE 660
Query: 661 KTAFDFDKIPSEQSKEEKSSAKQCGSVRMKEKGELDFSVGALHVLPLYAMLPATSQLRVF 720
K A FDKI + S + + AK+ S RMKE GEL F VGALHVLPLYAMLPA +QLRVF
Sbjct: 661 KVA--FDKIQVDHSTKGELPAKRV-SARMKENGELGFLVGALHVLPLYAMLPAAAQLRVF 720
Query: 721 EEVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKTYNSSNGIENYEVQWISKASAA 780
EEVKEG+RLVV+ATNVAETSLTIPGIKYVVDTGREKVKTYNSSNGIENYE+QWISKASAA
Sbjct: 721 EEVKEGDRLVVIATNVAETSLTIPGIKYVVDTGREKVKTYNSSNGIENYEIQWISKASAA 780
Query: 781 QRAGRAGRTGPGHCYRLYSSAVFSNIFPDFSLAEIAKVPVDGVVLLMKSMGISKVVNFPF 840
QRAGRAGRTGPGHCYRLYSSAVFSNIFPDFSLAEIAK+PVDGVVLLMKSMGISKVVNFPF
Sbjct: 781 QRAGRAGRTGPGHCYRLYSSAVFSNIFPDFSLAEIAKIPVDGVVLLMKSMGISKVVNFPF 840
Query: 841 PTPPETSAVLEAESCLKALEALDSDGRLTPLGKAMARYPLSPRHSRMLLTVIQIMKTLKN 900
PTPPETSAVLEAESCLKALEALD+DGRLTPLGKAMARYPLSPRHSRMLLTVIQIM+ LK
Sbjct: 841 PTPPETSAVLEAESCLKALEALDNDGRLTPLGKAMARYPLSPRHSRMLLTVIQIMRNLKT 900
Query: 901 YERANLVLAYSVAAAAALSMSNPFAIMFEGSQMKDDLEQNDRSSERADTKAEEKVEKSLK 960
Y+RANLVLAYSVAAAAALS SNPF +MFEGSQ+KDDLEQ DRS E ADTKAEEKVEKSLK
Sbjct: 901 YDRANLVLAYSVAAAAALSTSNPFVMMFEGSQVKDDLEQYDRSLELADTKAEEKVEKSLK 960
Query: 961 KKLKEAGKLSREKFSNPSCDALTIAYALQCFELSGSPAEFCNNYTLHLKTMQEMSKLRKQ 1020
KKLKEAGKLSREKFSNP+ DALTIAYALQCFELS S FCN YTLHLKTMQEMSKLRKQ
Sbjct: 961 KKLKEAGKLSREKFSNPTSDALTIAYALQCFELSESSVAFCNTYTLHLKTMQEMSKLRKQ 1020
Query: 1021 LLQLVFNHNGSSSAEFDFSWTSGTLEHVEDAWRIPSNKHPLSLNEEGIIGQAICAGWPDR 1080
LLQLVFNH+GS+ A+ DFSWT+GTLE VE+ WRIPSNKHPL LNEE IIGQAICAGWPDR
Sbjct: 1021 LLQLVFNHSGSAIADSDFSWTNGTLEDVENVWRIPSNKHPLLLNEEEIIGQAICAGWPDR 1080
Query: 1081 VAKRIREISKSADGDRRERTGKYQACMVKEAVFLHRRSSVSRSAPEFVVYNELLHTKRPY 1140
VAKRIREISKS + DR+ERTGKYQACMVKE VFL+RRSSVSRSAPEF+VYNELL TKRPY
Sbjct: 1081 VAKRIREISKSTEDDRKERTGKYQACMVKENVFLNRRSSVSRSAPEFLVYNELLRTKRPY 1140
Query: 1141 MHGLTSVKPDWLVKYASSLCAFSAPLTDPRPYYEPRNDTVFAWVAPAFGPHLWKLPLHNV 1200
MHGLTSVKP+WLVKYASSLC FSAPLTDPRPYY+P+NDTVF+WVAP FGPHLWKLPLHN
Sbjct: 1141 MHGLTSVKPNWLVKYASSLCTFSAPLTDPRPYYDPQNDTVFSWVAPTFGPHLWKLPLHNA 1200
Query: 1201 PIKDDVHGVGVFGCALLEGNVLPCLKSVRKFMAAPPSSILRPEALGQKRVGNLLSRLKSK 1260
PIKD+ HGV VF CALLEGNVLPCLK+VRKFMAAPPSSILRPEALGQKRVGNLLSRLKSK
Sbjct: 1201 PIKDNAHGVAVFACALLEGNVLPCLKNVRKFMAAPPSSILRPEALGQKRVGNLLSRLKSK 1260
Query: 1261 KIKSCATLREAWNDNPYELHSEILDWFQESYHSHFEELWSKMLCEV 1305
KI SCATLR W DNPYELHSEILDWFQESYHSHFE+LWS+MLCE+
Sbjct: 1261 KINSCATLRVVWKDNPYELHSEILDWFQESYHSHFEDLWSQMLCEL 1303
BLAST of Sed0026170 vs. NCBI nr
Match:
KAG6575802.1 (ATP-dependent RNA helicase DEAH13, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 2182.5 bits (5654), Expect = 0.0e+00
Identity = 1126/1306 (86.22%), Postives = 1196/1306 (91.58%), Query Frame = 0
Query: 1 MEDLLNDQLDCGNGSWSMDSGGSNQVIMYGSKKSDKKRKNMNKGCKGIQINKKPKLSKSQ 60
MEDL+NDQLDCG GSWSMD GGSNQVI+YGSKKSDKKRKNMNKGCKG QINKKPKLSKSQ
Sbjct: 1 MEDLVNDQLDCGKGSWSMDGGGSNQVILYGSKKSDKKRKNMNKGCKGTQINKKPKLSKSQ 60
Query: 61 KKKVMKLEEEKEKSLLLSKSLGMLEKYKIPDDAFLLLRSTVSIGQSETRLGKRSRDIQFS 120
KKK+MKLEEEKEKSLLLSKSL LEKYKIPDDAFLLLRS+V+IGQ ETRL KRSRDIQFS
Sbjct: 61 KKKMMKLEEEKEKSLLLSKSLETLEKYKIPDDAFLLLRSSVNIGQDETRLEKRSRDIQFS 120
Query: 121 KVGIEVPRNDHQLDKTDPDT--HENHFGSPDISPWHQLSAKVDEVLPFVSKREVSCGLDS 180
KVGIE PRN+ QL+KT DT HE+H GS +ISP HQLSA+ DE P + KREVSCGLDS
Sbjct: 121 KVGIEFPRNEQQLEKTCSDTSQHESHLGSLEISPRHQLSAEADEDCPCIEKREVSCGLDS 180
Query: 181 CQDLDNGTIVSNQGEVLSSLPNEDENICTLALEDGRDLSSAMCPDGGFKGPEIPDKKNVI 240
QDLD+G +VSNQG+ LS+LP+E ENIC + LE GRDLS C DG FKGPEI DK++ I
Sbjct: 181 FQDLDSGNVVSNQGKSLSALPDEVENICAVVLESGRDLSCTTCTDGDFKGPEIMDKRDEI 240
Query: 241 PNVETCKTYDPLPKLRLLSRPIVVPVLRPPEVEDRRKDLPIVMMEQEIMEAINENPIVII 300
P VE C T DPLP+LRLLSRPIVVPVLRP EVED+RKDLPIVMMEQEIMEAINENPIVII
Sbjct: 241 PKVEICTTSDPLPELRLLSRPIVVPVLRPCEVEDKRKDLPIVMMEQEIMEAINENPIVII 300
Query: 301 CGETGCGKTTQVPQFLYEAGFGSLQSGHQRGTIGVTQPRRVAVLATAKRVAYELNVHLGK 360
CGETGCGKTTQVPQFLYEAGFGSLQS HQRGTIGVTQPRRVAVLATAKRVAYEL VHLGK
Sbjct: 301 CGETGCGKTTQVPQFLYEAGFGSLQSSHQRGTIGVTQPRRVAVLATAKRVAYELGVHLGK 360
Query: 361 EVGFQVRYDKKIGDSSSIKFMTDGILLREVQHDFLLKRYSVLILDEAHERSMNTDILIGM 420
EVGFQVRYDKKIG SSSIKFMTDGILLREVQHDFLLKRYSVLILDEAHERSMNTDILIGM
Sbjct: 361 EVGFQVRYDKKIGGSSSIKFMTDGILLREVQHDFLLKRYSVLILDEAHERSMNTDILIGM 420
Query: 421 LSRVVKLRQDLHMKQQQMMLSGDNISPENMIFPLKLVLMSATLRVEDFISGGRLFHVSPP 480
LSRVVKLRQDLHMKQ+Q+MLSG ISPE+MIFPLKLVLMSATLRVEDFISGGRLFHVSPP
Sbjct: 421 LSRVVKLRQDLHMKQRQIMLSGGEISPEDMIFPLKLVLMSATLRVEDFISGGRLFHVSPP 480
Query: 481 IIEVPTRQYPVTVHFSRRTDTVDYIGQAYKKVLAIHKKLPPGGILVFVTGQREVENLCKK 540
IIEVPTRQYPVTVHFSRRTDTVDYIGQAYKKVLAIHKKLPPGGILVFVTGQREVEN+CKK
Sbjct: 481 IIEVPTRQYPVTVHFSRRTDTVDYIGQAYKKVLAIHKKLPPGGILVFVTGQREVENMCKK 540
Query: 541 LREASKKLIMKTSKKNVGNNNDNVEMNSIQNLDMKEINEAFEDNEISTGEQTDRFSSYDK 600
LREASKKLI KTS++NVG +N +EMNSIQNLDMKEINEAFED+E S GEQTDRFSS DK
Sbjct: 541 LREASKKLIKKTSERNVGIDNGAIEMNSIQNLDMKEINEAFEDHEFSAGEQTDRFSSCDK 600
Query: 601 DDFDINDDLSDASYNSETDSELEFDEDDLMLDENDGNLTDVLREDVNLASLKAAFDALDG 660
D+FD+NDD SDASYNSETDSELEF EDD + DE+DGNLTDVLRED ++ASLKAAF ALD
Sbjct: 601 DEFDVNDDASDASYNSETDSELEFSEDDALFDEDDGNLTDVLREDASMASLKAAFGALDE 660
Query: 661 KTAFDFDKIPSEQSKEEKSSAKQCGSVRMKEKGELDFSVGALHVLPLYAMLPATSQLRVF 720
K A FDKI + S + + AK+ S RM+E GEL F VGALHVLPLYAMLPA +QLRVF
Sbjct: 661 KVA--FDKIQVDHSTKGELPAKRV-SARMEENGELGFLVGALHVLPLYAMLPAAAQLRVF 720
Query: 721 EEVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKTYNSSNGIENYEVQWISKASAA 780
EEVKEG+RLVV+ATNVAETSLTIPGIKYVVDTGREKVKTYNSSNGIENYE+QWISKASAA
Sbjct: 721 EEVKEGDRLVVIATNVAETSLTIPGIKYVVDTGREKVKTYNSSNGIENYEIQWISKASAA 780
Query: 781 QRAGRAGRTGPGHCYRLYSSAVFSNIFPDFSLAEIAKVPVDGVVLLMKSMGISKVVNFPF 840
QRAGRAGRTGPGHCYRLYSSAVFSNIFPDFSLAEIAK+PVDGVVLLMKSMGISKVVNFPF
Sbjct: 781 QRAGRAGRTGPGHCYRLYSSAVFSNIFPDFSLAEIAKIPVDGVVLLMKSMGISKVVNFPF 840
Query: 841 PTPPETSAVLEAESCLKALEALDSDGRLTPLGKAMARYPLSPRHSRMLLTVIQIMKTLKN 900
PTPPETSAVLEAESCLKALEALD+DGRLTPLGKAMARYPLSPRHSRMLLTVIQIM+ LK
Sbjct: 841 PTPPETSAVLEAESCLKALEALDNDGRLTPLGKAMARYPLSPRHSRMLLTVIQIMRNLKT 900
Query: 901 YERANLVLAYSVAAAAALSMSNPFAIMFEGSQMKDDLEQNDRSSERADTKAEEKVEKSLK 960
Y+RANLVLAYSVAAAAALS SNPF +MFEGSQ+KDDLEQ DRS E ADTKAEEKVEKSLK
Sbjct: 901 YDRANLVLAYSVAAAAALSTSNPFVMMFEGSQVKDDLEQYDRSLELADTKAEEKVEKSLK 960
Query: 961 KKLKEAGKLSREKFSNPSCDALTIAYALQCFELSGSPAEFCNNYTLHLKTMQEMSKLRKQ 1020
KKLKEAGKLSREKFSNP+ DALTIAYALQCFELS S FCN YTLHLKTMQEMSKLRKQ
Sbjct: 961 KKLKEAGKLSREKFSNPTSDALTIAYALQCFELSESSVAFCNTYTLHLKTMQEMSKLRKQ 1020
Query: 1021 LLQLVFNHNGSSSAEFDFSWTSGTLEHVEDAWRIPSNKHPLSLNEEGIIGQAICAGWPDR 1080
LLQLVFNH+GS+ A+ DFSWT+GTLE VE+ WRIPSNKHPL LNEE II QAICAGWPDR
Sbjct: 1021 LLQLVFNHSGSAIADSDFSWTNGTLEDVENVWRIPSNKHPLLLNEEEIICQAICAGWPDR 1080
Query: 1081 VAKRIREISKSADGDRRERTGKYQACMVKEAVFLHRRSSVSRSAPEFVVYNELLHTKRPY 1140
VAKRIREISKS + DR+ERTGKYQACMVKE VFL+RRSSVSRSAPEF+VYNELL TKRPY
Sbjct: 1081 VAKRIREISKSTEDDRKERTGKYQACMVKENVFLNRRSSVSRSAPEFLVYNELLRTKRPY 1140
Query: 1141 MHGLTSVKPDWLVKYASSLCAFSAPLTDPRPYYEPRNDTVFAWVAPAFGPHLWKLPLHNV 1200
MHGLTSVKP+WLVKYASSLC FSAPLTDPRPYY+P+NDTVF+WVAP FGPHLWKLPLHN
Sbjct: 1141 MHGLTSVKPNWLVKYASSLCTFSAPLTDPRPYYDPQNDTVFSWVAPTFGPHLWKLPLHNA 1200
Query: 1201 PIKDDVHGVGVFGCALLEGNVLPCLKSVRKFMAAPPSSILRPEALGQKRVGNLLSRLKSK 1260
PIKD+ HGV VF CALLEGNVLPCLK+VRKFMAAPPSSILRPEALGQKRVGNLLSRLKSK
Sbjct: 1201 PIKDNAHGVAVFACALLEGNVLPCLKNVRKFMAAPPSSILRPEALGQKRVGNLLSRLKSK 1260
Query: 1261 KIKSCATLREAWNDNPYELHSEILDWFQESYHSHFEELWSKMLCEV 1305
KI SCATLR W DNPYELHSEILDWFQESYHSHFE+LWS+MLCE+
Sbjct: 1261 KINSCATLRVVWKDNPYELHSEILDWFQESYHSHFEDLWSQMLCEL 1303
BLAST of Sed0026170 vs. ExPASy Swiss-Prot
Match:
Q9C813 (ATP-dependent RNA helicase DEAH13 OS=Arabidopsis thaliana OX=3702 GN=FAS4 PE=2 SV=1)
HSP 1 Score: 1198.0 bits (3098), Expect = 0.0e+00
Identity = 695/1281 (54.25%), Postives = 869/1281 (67.84%), Query Frame = 0
Query: 31 SKKSDKKRKNMNKGCK-----GIQINKKPKLSKSQKKKVMKLEEEKEKSLLLSKSLGMLE 90
+K DK N N G K + N KSQK+K+ KLEE+KEK +L SK+ +L+
Sbjct: 25 NKMQDKLNSNNNTGSKKSRKRKLNSNVNTVACKSQKRKLKKLEEDKEKEILFSKTAELLD 84
Query: 91 KYKIPDDAFLLLRSTVSIGQSETRLGKRSRDIQFSKVGIEVPRNDHQLDKTDPDTHENHF 150
KYKI +D LL+S+ IG+S T+L KR R +Q SK G+E +D +++ D D ++
Sbjct: 85 KYKISEDVSSLLQSSKVIGRSATKLEKRRRAMQLSKAGVETEHSDESVEQNDND--DDSC 144
Query: 151 GSPDISPWHQLSAKVDEVLPFVSKREVSCGLDSCQDLDNGTIVSNQGEVLSSLPNEDENI 210
+P H E FV+ DS Q L + ++ + E S L D+ +
Sbjct: 145 MDEPTTPEH----VEIETPTFVT--------DSEQQLVHADLMISAEESSSKL-EVDDTV 204
Query: 211 CTLALEDGRDLSSAMCPDGGFKGPEIPDKKNVIPNVETCKTYDPLPKLRLLSRPIVVPVL 270
+ L RD DG + ++ + +P VV V
Sbjct: 205 DMIPLTTCRD-DDEDSMDGLIENEDVTVQGPRVP-------------------AFVVHVS 264
Query: 271 RPPEVEDRRKDLPIVMMEQEIMEAINENPIVIICGETGCGKTTQVPQFLYEAGFGSLQSG 330
RP EVE+ RKDLPIVMMEQEIMEAIN +P VII G+TGCGKTTQVPQFLYEAGFGS Q
Sbjct: 265 RPAEVEETRKDLPIVMMEQEIMEAINRHPAVIISGQTGCGKTTQVPQFLYEAGFGSKQFS 324
Query: 331 HQRGTIGVTQPRRVAVLATAKRVAYELNVHLGKEVGFQVRYDKKIGDSSSIKFMTDGILL 390
+ G IG+TQPRRVAVLATAKRVA+EL V LGKEVGFQVRYDKKIG++SSIKFMTDGILL
Sbjct: 325 SRSGIIGITQPRRVAVLATAKRVAFELGVRLGKEVGFQVRYDKKIGENSSIKFMTDGILL 384
Query: 391 REVQHDFLLKRYSVLILDEAHERSMNTDILIGMLSRVVKLRQDLHMKQQQMMLSGDNISP 450
RE+Q+DFLL+RYSV+ILDEAHERS+NTDILIGML+RV+K+RQ+ + +QQ+ + SG ++
Sbjct: 385 REIQNDFLLRRYSVIILDEAHERSLNTDILIGMLTRVIKIRQEYYEEQQKSLQSGGTVTS 444
Query: 451 ENMIFPLKLVLMSATLRVEDFISGGRLFHVSPPIIEVPTRQYPVTVHFSRRTDTVDYIGQ 510
E I PLKL+LMSATLRVEDF+SG RLF PP+IEVPTRQYPVT+HFS++T+ VDYIG+
Sbjct: 445 ECQITPLKLILMSATLRVEDFVSGKRLFPNIPPLIEVPTRQYPVTIHFSKKTEIVDYIGE 504
Query: 511 AYKKVLAIHKKLPPGGILVFVTGQREVENLCKKLREASKKLIMKTSKKNVGNNNDNVEMN 570
AYKKV++IHKKLP GGILVFVTGQREV+ LC+KLR++SK+L+++ +K++ +
Sbjct: 505 AYKKVMSIHKKLPQGGILVFVTGQREVDYLCEKLRKSSKELVVQAAKRD-AYVKKKCDDG 564
Query: 571 SIQNLDMKEINEAFEDNEISTGEQTDRFSSYDKDDFDINDDLSDASYNSETDSELEFDED 630
S +DMKEI EAF+D+ + Q RFSS+ +D DI D D + E E + D D
Sbjct: 565 SFGGVDMKEIAEAFDDD---SNNQNSRFSSHGEDPSDIGDGNYDDDFEEEDMYESDEDRD 624
Query: 631 DLMLDENDGNLTDVLREDVNLASLKAAFDALDGKTAFDFDKIPSEQSKEEKSSAKQCGSV 690
+D DG + + E+ L +L+AAF+AL K + +E +K + ++ V
Sbjct: 625 WETVD--DGFASSFV-EEGKLDALRAAFNALADKNG----SVSAEPAKSIAAENQEAEQV 684
Query: 691 RMKEKGELDFSVGALHVLPLYAMLPATSQLRVFEEVKEGERLVVVATNVAETSLTIPGIK 750
+ K FS G L VLPLYAML +QLRVFEEV++ ERLVVVATNVAETSLTIPGIK
Sbjct: 685 KNK------FSPGKLRVLPLYAMLSPAAQLRVFEEVEKEERLVVVATNVAETSLTIPGIK 744
Query: 751 YVVDTGREKVKTYNSSNGIENYEVQWISKASAAQRAGRAGRTGPGHCYRLYSSAVFSNIF 810
YVVDTGR KVK Y+S G+E+YEV WIS+ASA+QRAGRAGRTGPGHCYRLYSSAVFSNIF
Sbjct: 745 YVVDTGRVKVKNYDSKTGMESYEVDWISQASASQRAGRAGRTGPGHCYRLYSSAVFSNIF 804
Query: 811 PDFSLAEIAKVPVDGVVLLMKSMGISKVVNFPFPTPPETSAVLEAESCLKALEALDSDGR 870
+ SL EI KVPVDGV+LLMKSM I KV NFPFPTPPE SA+ EAE CLKALEALDS+G
Sbjct: 805 EESSLPEIMKVPVDGVILLMKSMNIPKVENFPFPTPPEPSAIREAERCLKALEALDSNGG 864
Query: 871 LTPLGKAMARYPLSPRHSRMLLTVIQIMKTLKNYERANLVLAYSVAAAAALSMSNPFAIM 930
LTPLGKAM+ YP+SPRHSRMLLTVIQ++K +NY RANL+L Y+VAA AALS+ NP +
Sbjct: 865 LTPLGKAMSHYPMSPRHSRMLLTVIQMLKETRNYSRANLILGYAVAAVAALSLPNPLIME 924
Query: 931 FEGSQMKDDLEQNDRSSERADTKAEEKVEKSLKKKLKEAGKLSREKFSNPSCDALTIAYA 990
FEG + + S+ AD K ++ +K KK KE K +R++FSNPS DALT+AYA
Sbjct: 925 FEGEKKNE--------SKDAD-KTVKQEDKQRKKDRKEKIKAARDRFSNPSSDALTVAYA 984
Query: 991 LQCFELSGSPAEFCNNYTLHLKTMQEMSKLRKQLLQLVFNHNGSSSAEFDFSWTSGTLEH 1050
L FE+S + FC LHLKTM EMSKL+ QLL+LVFN S E FSWT GT++
Sbjct: 985 LHSFEVSENGMGFCEANGLHLKTMDEMSKLKDQLLRLVFNCCKPSETEDSFSWTHGTIQD 1044
Query: 1051 VEDAWRI---PSNKHPLSLNEEGIIGQAICAGWPDRVAKRIREISKSADGDRRERTGKYQ 1110
VE +WRI S+K PL NEE ++G+AICAGW DRVA R+ R +YQ
Sbjct: 1045 VEKSWRITTSTSSKTPLLQNEEELLGEAICAGWADRVA-------------RKTRATEYQ 1104
Query: 1111 ACMVKEAVFLHRRSSVSRSAPEFVVYNELLHTKRPYMHGLTSVKPDWLVKYASSLCAFSA 1170
AC V+E VFLHR SS+ SAPE +VY+ELL T RPYMHG T V+P+WLVK+A SLC FSA
Sbjct: 1105 ACAVQEPVFLHRWSSLINSAPELLVYSELLLTNRPYMHGATRVRPEWLVKHAKSLCVFSA 1164
Query: 1171 PLTDPRPYYEPRNDTVFAWVAPAFGPHLWKLPLHNVPIKDDVHGVGVFGCALLEGNVLPC 1230
PL DP+PYY D V WV P+FGPH W+LP H+V I +D FGCALL+G VL C
Sbjct: 1165 PLKDPKPYYSSEEDRVLCWVVPSFGPHNWELPAHSVAITEDRDRAAAFGCALLQGEVLTC 1224
Query: 1231 LKSVRKFMAAPPSSILRPEALGQKRVGNLLSRLKSKKIKSCATLREAWNDNPYELHSEIL 1290
LKS R +A P ++L EA G +RVG+L+ L KKI + +LR+ W NP L+SEI
Sbjct: 1225 LKSFRALLAGKPETLLEREAWGLERVGSLVMVLTEKKIDTLESLRKNWEQNPNVLYSEIE 1231
Query: 1291 DWFQESYHSHFEELWSKMLCE 1304
WFQ+ + ++LW ML E
Sbjct: 1285 VWFQKKFRHRVKDLWQTMLKE 1231
BLAST of Sed0026170 vs. ExPASy Swiss-Prot
Match:
Q8IY37 (Probable ATP-dependent RNA helicase DHX37 OS=Homo sapiens OX=9606 GN=DHX37 PE=1 SV=1)
HSP 1 Score: 564.7 bits (1454), Expect = 2.8e-159
Identity = 389/1065 (36.53%), Postives = 549/1065 (51.55%), Query Frame = 0
Query: 249 PLPKLRLLSRPIV-VPVLRPPEVEDRRKDLPIVMMEQEIMEAINENPIVIICGETGCGKT 308
PLP R L++P V +PV R PE+++ R LPI+ EQ IMEA+ E+PIVI+CGETG GKT
Sbjct: 225 PLP--RALAKPAVFIPVNRSPEMQEERLKLPILSEEQVIMEAVAEHPIVIVCGETGSGKT 284
Query: 309 TQVPQFLYEAGFGSLQSGHQRGTIGVTQPRRVAVLATAKRVAYELNVHLGKEVGFQVRYD 368
TQVPQFLYEAGF S S IGVT+PRRVA +A ++RVA E+N+ + V +Q+RY+
Sbjct: 285 TQVPQFLYEAGFSSEDS-----IIGVTEPRRVAAVAMSQRVAKEMNLS-QRVVSYQIRYE 344
Query: 369 KKIGDSSSIKFMTDGILLREVQHDFLLKRYSVLILDEAHERSMNTDILIGMLSRVVKLRQ 428
+ + + IKFMTDG+LL+E+Q DFLL RY V+I+DEAHERS+ TDILIG+LSR+V LR
Sbjct: 345 GNVTEETRIKFMTDGVLLKEIQKDFLLLRYKVVIIDEAHERSVYTDILIGLLSRIVTLRA 404
Query: 429 DLHMKQQQMMLSGDNISPENMIFPLKLVLMSATLRVEDFISGGRLFHVSPPIIEVPTRQY 488
++ PLKL++MSATLRVEDF RLF PP+I+V +RQ+
Sbjct: 405 KRNL-------------------PLKLLIMSATLRVEDFTQNPRLFAKPPPVIKVESRQF 464
Query: 489 PVTVHFSRRTDTVDYIGQAYKKVLAIHKKLPPGGILVFVTGQREVENLCKKLREASKKLI 548
PVTVHF++RT DY G+ ++KV IH+ LP GGILVF+TGQ EV LC++LR+A
Sbjct: 465 PVTVHFNKRTPLEDYSGECFRKVCKIHRMLPAGGILVFLTGQAEVHALCRRLRKAFPPSR 524
Query: 549 MKTSKKNVGNNNDNVEMNSIQNLDMKEINEAFEDNEISTGEQTDRFSSYDKDDFDINDDL 608
+ +K+ + D+VE ++ E+ D +S +
Sbjct: 525 ARPQEKD-DDQKDSVE--EMRKFKKSRARAKKARAEVLPQINLDHYSVLPAGE------- 584
Query: 609 SDASYNSETDSELEFDEDDLMLDENDGNLTDVLREDVNLASLKAAFDALDGKTAFDFDKI 668
D +E D E + DL LD DG
Sbjct: 585 GDEDREAEVDEEEGALDSDLDLDLGDGG-------------------------------- 644
Query: 669 PSEQSKEEKSSAKQCGSVRMKEKGELDFSVGALHVLPLYAMLPATSQLRVFEEVKEGERL 728
++ GE + LHVLPLY++L Q +VF+ EG RL
Sbjct: 645 --------------------QDGGEQPDASLPLHVLPLYSLLAPEKQAQVFKPPPEGTRL 704
Query: 729 VVVATNVAETSLTIPGIKYVVDTGREKVKTYNSSNGIENYEVQWISKASAAQRAGRAGRT 788
VVATNVAETSLTIPGIKYVVD G+ K + Y+ G+ ++ V W+S+ASA QRAGRAGRT
Sbjct: 705 CVVATNVAETSLTIPGIKYVVDCGKVKKRYYDRVTGVSSFRVTWVSQASADQRAGRAGRT 764
Query: 789 GPGHCYRLYSSAVFSNIFPDFSLAEIAKVPVDGVVLLMKSMGISKVVNFPFPTPPETSAV 848
PGHCYRLYSSAVF + F F EI + PV+ ++L MK++ + KV+NFPFPTPP A+
Sbjct: 765 EPGHCYRLYSSAVFGD-FEQFPPPEITRRPVEDLILQMKALNVEKVINFPFPTPPSVEAL 824
Query: 849 LEAESCLKALEALDSDGR---------------LTPLGKAMARYPLSPRHSRMLLTVIQI 908
L AE L AL AL + +T LG+ MA +P++PR+++ML
Sbjct: 825 LAAEELLIALGALQPPQKAERVKQLQENRLSCPITALGRTMATFPVAPRYAKMLA----- 884
Query: 909 MKTLKNYERANLVLAYSVAAAAALSMSNPFAIMFEGSQMKDDLEQNDRSSERADTKAEEK 968
R + L Y++ A++++ F ++L++ S E T+ + K
Sbjct: 885 ------LSRQHGCLPYAITIVASMTVRELF----------EELDRPAASDEEL-TRLKSK 944
Query: 969 VEKSLKKKLKEAGKLSREKFSNPSCDALTIAYALQCFELSGSPAEFCNNYTLHLKTMQEM 1028
+ + K AG+ + K D + + A+ E + +FC L K M E+
Sbjct: 945 RARVAQMKRTWAGQGASLKLG----DLMVLLGAVGACEYASCTPQFCEANGLRYKAMMEI 1004
Query: 1029 SKLRKQLLQLVFNHNGSSSAEFDFSWTSGTLEHVEDAWRIPSNKHPLSLNEEGIIGQAIC 1088
+LR QL T+ E + P + ++ + Q +
Sbjct: 1005 RRLRGQLT------------------TAVNAVCPEAELFVDPKMQPPTESQVTYLRQIVT 1064
Query: 1089 AGWPDRVAKRIREISKSADGDRRERTGKYQACMVKEAVFLHRRSSVSRSAPEFVVYNELL 1148
AG D +A+R++ D R Y+ ++ + VF+H S + + PEFVVY E++
Sbjct: 1065 AGLGDHLARRVQSEEMLEDKWR----NAYKTPLLDDPVFIHPSSVLFKELPEFVVYQEIV 1124
Query: 1149 HTKRPYMHGLTSVKPDWLVKYASSLCAFSAPLTDPRPYYEPRNDTVFAWVAPAFGPHLWK 1208
T + YM G++SV+ W+ S C F PL +P P Y P V A F W
Sbjct: 1125 ETTKMYMKGVSSVEVQWIPALLPSYCQFDKPLEEPAPTYCPERGRVLCHRASVFYRVGWP 1151
Query: 1209 LPLHNVPIKDDVHGVGVFGCALLEGNVLPCLKSVRKFMAAPPSSILRPEALGQKRVGNLL 1268
LP V + + F LLEG V L S R + + P ++L+ A Q R +LL
Sbjct: 1185 LPAIEVDFPEGIDRYKHFARFLLEGQVFRKLASYRSCLLSSPGTMLKTWARLQPRTESLL 1151
Query: 1269 SRLKSKKIKSCATLREAWNDNPYELHSEILDWFQESYHSHFEELW 1298
L ++K L AW NP L +E +W ++ H E+ W
Sbjct: 1245 RALVAEKADCHEALLAAWKKNPKYLLAEYCEWLPQAMHPDIEKAW 1151
BLAST of Sed0026170 vs. ExPASy Swiss-Prot
Match:
O46072 (Probable ATP-dependent RNA helicase kurz OS=Drosophila melanogaster OX=7227 GN=kz PE=1 SV=1)
HSP 1 Score: 534.3 bits (1375), Expect = 4.0e-150
Identity = 396/1137 (34.83%), Postives = 575/1137 (50.57%), Query Frame = 0
Query: 201 EDENICTLALEDGRDLSSAMCPDGGFKGPEIPDKKNVIPNVETCKTYDPLPKLR------ 260
ED+ + + ED + + P IP ++ P K P+ KL+
Sbjct: 185 EDDEDSSSSDEDDEEAPAQSAPIA------IPTPVSIAPPQIAVK--PPIKKLKPEPNPP 244
Query: 261 -LLSRPIVVPVLRPPEVEDRRKDLPIVMMEQEIMEAINENPIVIICGETGCGKTTQVPQF 320
+ + + VPV R EV++ R LPI+ EQ++ME INENPIVI+ GETG GKTTQ+PQF
Sbjct: 245 ACIHQTVYVPVHRTTEVQNARLRLPILAEEQQVMETINENPIVIVAGETGSGKTTQLPQF 304
Query: 321 LYEAGFGSLQSGHQRGTIGVTQPRRVAVLATAKRVAYELNVHLGKEVGFQVRYDKKIGDS 380
LYEAG+ Q IGVT+PRRVA +A +KRVA+E+N+ EV + +R++ + +
Sbjct: 305 LYEAGYA------QHKMIGVTEPRRVAAIAMSKRVAHEMNLP-ESEVSYLIRFEGNVTPA 364
Query: 381 SSIKFMTDGILLREVQHDFLLKRYSVLILDEAHERSMNTDILIGMLSRVVKLRQDLHMKQ 440
+ IKFMTDG+LL+E++ DFLL +YSV+ILDEAHERS+ TDIL+G+LSR+V LR H +
Sbjct: 365 TRIKFMTDGVLLKEIETDFLLSKYSVIILDEAHERSVYTDILVGLLSRIVPLR---HKRG 424
Query: 441 QQMMLSGDNISPENMIFPLKLVLMSATLRVEDFISGGRLFHVSPPIIEVPTRQYPVTVHF 500
Q PLKL++MSATLRV DF RLF + PP+++V RQ+PVT+HF
Sbjct: 425 Q----------------PLKLIIMSATLRVSDFTENTRLFKIPPPLLKVEARQFPVTIHF 484
Query: 501 SRRTDTVDYIGQAYKKVLAIHKKLPPGGILVFVTGQREVENLCKKLREASKKLIMKTSKK 560
+RT DY+ +AY+K L IH KLP GGIL+FVTGQ+EV L +KLR T K
Sbjct: 485 QKRTPD-DYVAEAYRKTLKIHNKLPEGGILIFVTGQQEVNQLVRKLRRTFPYHHAPT--K 544
Query: 561 NVGNNNDNVEMNSIQNLDMKEINEAFEDNEISTGEQTDRFSSYDKDDFDINDDLSDASYN 620
+V N + S +K+ + + DA+
Sbjct: 545 DVAKNG--------------------------------KVSEEEKE-----ETIDDAAST 604
Query: 621 SETDSELEFDEDDLMLDENDGN---LTDVLREDVNLASLKAAFDALDGKTAFDFDKIPSE 680
E ELEFD ++ + L + +NL K D T D + P E
Sbjct: 605 VEDPKELEFDMKRVIRNIRKSKKKFLAQMALPKINLDDYKLPGD----DTEADMHEQPDE 664
Query: 681 QSKEEKSSAKQCGSVRMK-EKGELDFSVGALHVLPLYAMLPATSQLRVFEEVKEGERLVV 740
++E + ++ E G L VLPLY++L + Q R+F V +G RL V
Sbjct: 665 DDEQEGLEEDNDDELGLEDESGMGSGQRQPLWVLPLYSLLSSEKQNRIFLPVPDGCRLCV 724
Query: 741 VATNVAETSLTIPGIKYVVDTGREKVKTYNSSNGIENYEVQWISKASAAQRAGRAGRTGP 800
V+TNVAETSLTIP IKYVVD GR+K + Y+ G+ + V + SKASA QRAGRAGR
Sbjct: 725 VSTNVAETSLTIPHIKYVVDCGRQKTRLYDKLTGVSAFVVTYTSKASADQRAGRAGRISA 784
Query: 801 GHCYRLYSSAVFSNIFPDFSLAEIAKVPVDGVVLLMKSMGISKVVNFPFPTPPETSAVLE 860
GHCYRLYSSAV+++ F DFS +I K PV+ ++L M+ MGI +VV+FPFP+PP+ +
Sbjct: 785 GHCYRLYSSAVYNDCFEDFSQPDIQKKPVEDLMLQMRCMGIDRVVHFPFPSPPDQVQLQA 844
Query: 861 AESCLKALEAL--------DSDGRLTPLGKAMARYPLSPRHSRMLLTVIQIMKTLKNYER 920
AE L L AL D +T LG ++R+P++PR +ML Q
Sbjct: 845 AERRLIVLGALEVAKTENTDLPPAVTRLGHVISRFPVAPRFGKMLALSHQ---------- 904
Query: 921 ANLVLAYSVAAAAALSMSNPFAIMFEGSQMKDDLEQNDRSSERADTKAEEKVEKSLKKKL 980
+L Y+V AALS+ ++ G Q +D+ R K+
Sbjct: 905 -QNLLPYTVCLVAALSVQE--VLIETGVQRDEDVAPGANRFHR--------------KRQ 964
Query: 981 KEAGKLSREKFSNPSCDALTIAYALQCFELSGSPA---EFCNNYTLHLKTMQEMSKLRKQ 1040
A + + +P + + A+ E +GS EFC L K M E+ KLR Q
Sbjct: 965 SWAASGNYQLLGDP----MVLLRAVGAAEYAGSQGRLPEFCAANGLRQKAMSEVRKLRVQ 1024
Query: 1041 LLQLVFNHNGSSSAEFDFSWTSGTLEHVEDAWRIPSNKHPLSLNEEGIIGQAICAGWPDR 1100
L + N N S +E D P K P + + Q + AG DR
Sbjct: 1025 LTNEI-NLNVSD------------VELGVD----PELKPPTDA-QARFLRQILLAGMGDR 1084
Query: 1101 VAKRIREISKSADGDRRERTGKYQACMVKEAVFLHRRSSVSRSAPEFVVYNELLH----- 1160
VA+++ + +RR Y ++E FLH S + + APE+V+Y E
Sbjct: 1085 VARKVPLADIADKEERRRLKYAYNCADMEEPAFLHVSSVLRQKAPEWVIYQEAYELQNGD 1144
Query: 1161 TKRPYMHGLTSVKPDWLVKYASSLCAFSAPLTDPRPYYEPRNDTVFAWVAPAFGPHLWKL 1220
+ + ++ G+T+++P+WL+ Y LC DP P ++ + +F V FG W+L
Sbjct: 1145 STKMFIRGITAIEPEWLLLYVPLLCNIREVREDPAPRFDKTSGKIFCHVDATFGKSGWEL 1192
Query: 1221 PLHNVPIKDDVHGVGVFGCALLEGNVLPCLKSVRKFMAAPPSSILRPEALGQKRVGNLLS 1280
PL V + FG LL+G V L R + + P+S+++ + +V
Sbjct: 1205 PLGEVEMPLSEKACCYFGMFLLDGEVCSRLADFRSKLKSTPASVIKSWSSMNNKVLRFKR 1192
Query: 1281 RLKSKKIKSCATLREAWNDNPYELHSEILDWFQESYHSHFEELWSKMLCEVQEPQKR 1311
L +K+I + L + WN +P+ L E + + S LW + + +EPQ++
Sbjct: 1265 ALITKQIHNRQALIDQWNSDPHFLLEEYQNLLYDVALSELTPLWPPV--DKKEPQRQ 1192
BLAST of Sed0026170 vs. ExPASy Swiss-Prot
Match:
P34305 (Putative ATP-dependent RNA helicase rha-2 OS=Caenorhabditis elegans OX=6239 GN=rha-2 PE=3 SV=2)
HSP 1 Score: 507.3 bits (1305), Expect = 5.3e-142
Identity = 365/1063 (34.34%), Postives = 541/1063 (50.89%), Query Frame = 0
Query: 250 LPKLRLLSRPIVVPVLRPPEVEDRRKDLPIVMMEQEIMEAINENPIVIICGETGCGKTTQ 309
LP +++R V+ V R E++ R +LPI E I+EAINEN + ++CGETG GKTTQ
Sbjct: 210 LPTTTVINRKKVI-VERSKEIQKSRAELPIFAEEMRIVEAINENLVTVVCGETGSGKTTQ 269
Query: 310 VPQFLYEAGFGSLQSGHQRGTIGVTQPRRVAVLATAKRVAYELNVHLGKEVGFQVRYDKK 369
+PQFLYEAG+ S + IG+T+PRRVA +A A+RV EL EV +Q+RY+
Sbjct: 270 IPQFLYEAGYAS-----EGELIGITEPRRVAAIAMAQRVGVEL--AKPDEVSYQIRYEGT 329
Query: 370 IGDSSSIKFMTDGILLREVQHDFLLKRYSVLILDEAHERSMNTDILIGMLSRVVKLRQDL 429
++++I FMTDG+L++E++ D +LK+YSV+++DEAHERSM +D+LIGMLSR+V LR
Sbjct: 330 RSETTNILFMTDGVLMKEMEQDVMLKKYSVILIDEAHERSMYSDVLIGMLSRIVPLR--- 389
Query: 430 HMKQQQMMLSGDNISPENMIFPLKLVLMSATLRVEDFISGGRLFHVSPPIIEVPTRQYPV 489
PL+LV+MSATLR++DF ++P +I+V RQ+PV
Sbjct: 390 ----------------SKTARPLRLVIMSATLRLDDFTHKKLFPLLTPKVIKVDARQFPV 449
Query: 490 TVHFSRRTDTVDYIGQAYKKVLAIHKKLPPGGILVFVTGQREVENLCKKLREASKKLIMK 549
+VHF +RT DYI A++K IH+ LPPG ILVFVTGQ EV+ L KL++ ++ +
Sbjct: 450 SVHFEKRTPD-DYIASAFRKTCRIHETLPPGAILVFVTGQHEVKQLITKLKK-RYPVVYE 509
Query: 550 TSKKNVGNNNDNVEMNSIQNLDMKEINEAFEDNEISTGEQTDRFSSYDKDDFDINDDLSD 609
T K N V + + K++ A E+T ++ D++D L D
Sbjct: 510 TDK------NGEVLVKGTKEWKEKKVEAAKSIKLEDFKEETPETEDFE----DVDDGLMD 569
Query: 610 ASYNSETDSELEFDEDDLMLDENDGNLTDVLREDVNLASLKAAFDALDGKTAFDFDKIPS 669
+E + FD+ + + DG+L+D
Sbjct: 570 GDDMNERGAAEAFDDYE-EFENGDGDLSD------------------------------- 629
Query: 670 EQSKEEKSSAKQCGSVRMKEKGELDFSVGA-------LHVLPLYAMLPATSQLRVFEEVK 729
G+++ S+GA L+ LPLY++L Q RVF+E
Sbjct: 630 ---------------------GKVENSIGAPPADCEPLYCLPLYSLLSMGKQRRVFDETP 689
Query: 730 EGERLVVVATNVAETSLTIPGIKYVVDTGREKVKTYNSSNGIENYEVQWISKASAAQRAG 789
G RL V++TNVAETSLTIPG+KYV+D G EK + Y+S G+ + V IS+AS QRAG
Sbjct: 690 AGMRLCVISTNVAETSLTIPGVKYVIDGGFEKRRLYDSITGVSRFAVCRISQASGDQRAG 749
Query: 790 RAGRTGPGHCYRLYSSAVFSNIFPDFSLAEIAKVPVDGVVLLMKSMGISKVVNFPFPTPP 849
RAGR GH YRLYSSAV+ + F F+ EI P D +VL +KSM I KVVNFPFP+ P
Sbjct: 750 RAGRISAGHAYRLYSSAVYQD-FVKFADPEILSKPADQLVLHLKSMNIVKVVNFPFPSAP 809
Query: 850 ETSAVLEAESCLKALEALD-------SDGRLTPLGKAMARYPLSPRHSRMLLTVIQIMKT 909
+ + AE L L AL ++ R+T LGK +A +PL+P +++ + Q
Sbjct: 810 DEQMLESAEKRLCRLGALSESTKNGKTEARITKLGKTLAVFPLAPSYAKFIAMADQ---- 869
Query: 910 LKNYERANLVLAYSVAAAAALSMSNPFAIMFEGSQMKDDLEQNDRSSERADTKAEEKVEK 969
+ ++++++ + LS+ P + SS R DT E K +
Sbjct: 870 -------HNLMSHAILLISLLSVREPLIPV---------------SSLRGDTPEETK--E 929
Query: 970 SLKKKLKEAGKLSREKFSNPSCDALTIAYALQCFELSGSPAEFCNNYTLHLKTMQEMSKL 1029
+K LKE + + D + +A E A C L +K + E KL
Sbjct: 930 LMKNVLKERRRWCSHTGARRLGDLKVLMHAASVAEQIKYNARECEKVGLRVKALVEARKL 989
Query: 1030 RKQLLQLVFNHNGSSSAEFDFSWTSGTLEHVEDAWRIPSNKHPLSLNEEGIIGQAICAGW 1089
R+QL +V N S E A + S+ P + + ++ Q + A +
Sbjct: 990 RQQLTNIV---NASCKK--------------EHAAALDSDLPPPTDQQAQLLRQMVVASF 1049
Query: 1090 PDRVAKRIREISKSADGDRRERTGKYQACMVKEAVFLHRRSSVSRSAPEFVVYNELLH-T 1149
DR+A+R+ + G + G Y+ ++K VF+ S V PEFV+Y EL+
Sbjct: 1050 SDRLARRV----DRSVGQEEVQKGAYETTLIKGHVFIDPCSVVFTEEPEFVIYQELVQVN 1109
Query: 1150 KRPYMHGLTSVKPDWLVKYASSLCAFSAPLTDPRPYYEPRNDTVFAWVAPAFGPHLWKLP 1209
++ M + +V +WL + A S C + + P Y+P D V V FGP W+LP
Sbjct: 1110 EKKLMTSVCAVDKEWLSRLAESYCNYGEQDKNQEPIYDPVKDMVVKTVKVTFGPLNWELP 1130
Query: 1210 LHNVPIKDDVHGVGVFGCALLEGNVLPCLKSVRKFMAAPPSSILRPEALGQKRVGNLLSR 1269
N + D+ F LL+G V LK + APPS++++ A QKR LL++
Sbjct: 1170 NENRSVPHDIMMYRYFALFLLDGLVFEKLKEYTPKLLAPPSTMVKSWAKLQKRTEMLLNK 1130
Query: 1270 LKSKKIKSCATLREAWNDNPYELHSEILDWFQESYHSHFEELW 1298
L K++ + ++L+E W N L E L+W ES H +W
Sbjct: 1230 LIEKEVTTRSSLKEQWLKNENWLLEEYLEWVPESVHQQISLMW 1130
BLAST of Sed0026170 vs. ExPASy Swiss-Prot
Match:
Q04217 (Probable ATP-dependent RNA helicase DHR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=ECM16 PE=1 SV=1)
HSP 1 Score: 503.8 bits (1296), Expect = 5.8e-141
Identity = 340/834 (40.77%), Postives = 469/834 (56.24%), Query Frame = 0
Query: 262 VPVLRPPEVEDRRKDLPIVMMEQEIMEAINENPIVIICGETGCGKTTQVPQFLYEAGFGS 321
V V R E++ R LP+ E +IMEAI+ N +VIICGETG GKTTQVPQFLYEAGFG+
Sbjct: 376 VEVSRSDEIQKARIQLPVFGEEHKIMEAIHHNDVVIICGETGSGKTTQVPQFLYEAGFGA 435
Query: 322 LQSGHQRGTIGVTQPRRVAVLATAKRVAYELNVHLGKEVGFQVRYDKKIGDSSSIKFMTD 381
S G +G+TQPRRVA ++ A+RVA EL H G +VG+Q+R+D + + +KFMTD
Sbjct: 436 EDSPDYPGMVGITQPRRVAAVSMAERVANELGDH-GHKVGYQIRFDSTAKEDTKVKFMTD 495
Query: 382 GILLREVQHDFLLKRYSVLILDEAHERSMNTDILIGMLSRVVKLRQDLHMKQQQMMLSGD 441
G+LLRE+ HDF L +YS +I+DEAHER++NTDILIGMLSR V+LR LH
Sbjct: 496 GVLLREMMHDFKLTKYSSIIIDEAHERNINTDILIGMLSRCVRLRAKLH----------- 555
Query: 442 NISPENMI--FPLKLVLMSATLRVEDFISGGRLFHVSPPIIEVPTRQYPVTVHFSRRTDT 501
EN I LKL++MSATLRV DF LF ++PP+++V RQ+PV++HF+RRT
Sbjct: 556 ---KENPIEHKKLKLIIMSATLRVSDFSENKTLFPIAPPVLQVDARQFPVSIHFNRRT-A 615
Query: 502 VDYIGQAYKKVLAIHKKLPPGGILVFVTGQREVENLCKKLREASKKLIMKTSKKNVGNNN 561
+Y +A++K IH+KLPPG ILVF+TGQ+E+ ++ K+LR+ KKN N
Sbjct: 616 FNYTDEAFRKTCKIHQKLPPGAILVFLTGQQEITHMVKRLRKEF------PFKKNSKYNK 675
Query: 562 DNVEMNSIQNLDMKEINEAFEDNEISTGEQTDRFSSYDKDDFDINDDLSDASYNSETDSE 621
D S ++ K + ED + S D+D F S
Sbjct: 676 DLETPVSKMGINSKTTDLEAEDIDFSV-------QVIDQDKF---------------KSA 735
Query: 622 LEFDEDDLMLDENDGNLTDVLREDVNLASLKAAFDALDGKTAFDFDKIPSEQSKEEKSSA 681
+ ++ED + N GN D ED + +G+TA D
Sbjct: 736 IRYEED----EGNSGNGED--EEDEEEEGFEEVL--TEGQTAND---------------- 795
Query: 682 KQCGSVRMKEKGELDFSVGALHVLPLYAMLPATSQLRVFEEVKEGERLVVVATNVAETSL 741
L+VLPLY++LP Q+RVF++ +G RL +VATNVAETSL
Sbjct: 796 -------------------PLYVLPLYSLLPTKEQMRVFQKPPQGSRLCIVATNVAETSL 855
Query: 742 TIPGIKYVVDTGREKVKTYNSSNGIENYEVQWISKASAAQRAGRAGRTGPGHCYRLYSSA 801
TIPG++YVVD+GR K + YN SNG++++EV W+SKASA QR+GRAGRTGPGHCYRLYSSA
Sbjct: 856 TIPGVRYVVDSGRSKERKYNESNGVQSFEVGWVSKASANQRSGRAGRTGPGHCYRLYSSA 915
Query: 802 VFSNIFPDFSLAEIAKVPVDGVVLLMKSMGISKVVNFPFPTPPETSAVLEAESCLKALEA 861
VF + F FS EI ++PV+ +VL MKSM I ++NFPFPTPP+ A+ +A L+ L A
Sbjct: 916 VFEHDFEQFSKPEILRMPVESIVLQMKSMAIHNIINFPFPTPPDRVALSKAIQLLQYLGA 975
Query: 862 LDSDGRLTPLGKAMARYPLSPRHSRMLLTVIQIMKTLKNYERANLVLAYSVAAAAALSMS 921
LD+ +T GK M+ +PLSPR S+MLL + E+A L Y VA +ALS+
Sbjct: 976 LDNKEMITEDGKKMSLFPLSPRFSKMLLV---------SDEKA--CLPYIVAIVSALSVG 1035
Query: 922 NPFAIMFEGSQMKDDLEQNDRSSERADTKAEEKVEKS------LKKKLKEAGKLSREKFS 981
+PF FE +++ + E D K E E + LKK+L+ SR +FS
Sbjct: 1036 DPFINEFELG--INEISRKPNPDENLDDKIREHDESTPGMDPELKKELRSKFYKSRSQFS 1095
Query: 982 --NPSCDALTIAYALQCFELSGSPAE--FCNNYTLHLKTMQEMSKLRKQLLQLVFNHNGS 1041
+ D + + + + F L K M+E+ KLRKQL+ ++ ++
Sbjct: 1096 KLDKFSDVFRLLSVVSAMDYVPKEQKEIFMKKNFLRGKLMEEIVKLRKQLMYIIKSNTSK 1095
Query: 1042 SSAEFDFSWTSGTLEHVEDAWRIPSNKHPL-SLNEEGIIGQAICAGWPDRVAKR 1083
E++ R K + S+ + ++ Q ICAG+ D VA R
Sbjct: 1156 --------------ENIAVVIRNEDLKSDIPSVIQIKLLKQMICAGFVDHVAVR 1095
BLAST of Sed0026170 vs. ExPASy TrEMBL
Match:
A0A6J1GQE0 (ATP-dependent RNA helicase DEAH13 OS=Cucurbita moschata OX=3662 GN=LOC111456150 PE=4 SV=1)
HSP 1 Score: 2198.3 bits (5695), Expect = 0.0e+00
Identity = 1136/1322 (85.93%), Postives = 1212/1322 (91.68%), Query Frame = 0
Query: 1 MEDLLNDQLDCGNGSWSMDSGGSNQVIMYGSKKSDKKRKNMNKGCKGIQINKKPKLSKSQ 60
MEDL+NDQLDCG GSWSMD GGSNQVI+YGSKKSDKKRKNMNKGCKG QINKKPKLSKSQ
Sbjct: 1 MEDLVNDQLDCGKGSWSMDGGGSNQVILYGSKKSDKKRKNMNKGCKGTQINKKPKLSKSQ 60
Query: 61 KKKVMKLEEEKEKSLLLSKSLGMLEKYKIPDDAFLLLRSTVSIGQSETRLGKRSRDIQFS 120
KKK+MKLEEEKEKSLLLSKSL LEKYKIPDDAFLLLRS+V+IGQ ETRL KRSR+IQFS
Sbjct: 61 KKKMMKLEEEKEKSLLLSKSLETLEKYKIPDDAFLLLRSSVNIGQDETRLEKRSRNIQFS 120
Query: 121 KVGIEVPRNDHQLDKTDPDT--HENHFGSPDISPWHQLSAKVDEVLPFVSKREVSCGLDS 180
KVGIE PRN+ QL+KT DT HE+H GS +ISP HQLSA+ DE P + KREVS GLDS
Sbjct: 121 KVGIEFPRNEQQLEKTCSDTSQHESHLGSLEISPRHQLSAEADEDCPCIEKREVSSGLDS 180
Query: 181 CQDLDNGTIVSNQGEVLSSLPNEDENICTLALEDGRDLSSAMCPDGGFKGPEIPDKKNVI 240
Q+LD+G +VSNQG+ LS+LP+E ENIC + LE GRDLS C +G FKGPEI DK++ I
Sbjct: 181 FQNLDSGNVVSNQGKSLSALPDEVENICAVVLESGRDLSCTTCMNGDFKGPEIMDKRDEI 240
Query: 241 PNVETCKTYDPLPKLRLLSRPIVVPVLRPPEVEDRRKDLPIVMMEQEIMEAINENPIVII 300
P VE C T DPLP+LRLLSRPIVVPVLRP EVED+RKDLPIVMMEQEIMEAINENPIVII
Sbjct: 241 PKVEICTTSDPLPELRLLSRPIVVPVLRPCEVEDKRKDLPIVMMEQEIMEAINENPIVII 300
Query: 301 CGETGCGKTTQVPQFLYEAGFGSLQSGHQRGTIGVTQPRRVAVLATAKRVAYELNVHLGK 360
CGETGCGKTTQVPQFLYEAGFGSLQS HQRGTIGVTQPRRVAVLATAKRVAYEL VHLGK
Sbjct: 301 CGETGCGKTTQVPQFLYEAGFGSLQSSHQRGTIGVTQPRRVAVLATAKRVAYELGVHLGK 360
Query: 361 EVGFQVRYDKKIGDSSSIKFMTDGILLREVQHDFLLKRYSVLILDEAHERSMNTDILIGM 420
EVGFQVRYDKKIG SSSIKFMTDGILLREVQHDFLLKRYSVLILDEAHERSMNTDILIGM
Sbjct: 361 EVGFQVRYDKKIGGSSSIKFMTDGILLREVQHDFLLKRYSVLILDEAHERSMNTDILIGM 420
Query: 421 LSRVVKLRQDLHMKQQQMMLSGDNISPENMIFPLKLVLMSATLRVEDFISGGRLFHVSPP 480
LSRVVKLRQDLHMKQ+Q+MLSG ISPE+MIFPLKLVLMSATLRVEDFISGGRLFHVSPP
Sbjct: 421 LSRVVKLRQDLHMKQRQIMLSGGEISPEDMIFPLKLVLMSATLRVEDFISGGRLFHVSPP 480
Query: 481 IIEVPTRQYPVTVHFSRRTDTVDYIGQAYKKVLAIHKKLPPGGILVFVTGQREVENLCKK 540
IIEVPTRQYPVTVHFSRRTDTVDYIGQAYKKVLAIHKKLPPGGILVFVTGQREVEN+CKK
Sbjct: 481 IIEVPTRQYPVTVHFSRRTDTVDYIGQAYKKVLAIHKKLPPGGILVFVTGQREVENMCKK 540
Query: 541 LREASKKLIMKTSKKNVGNNNDNVEMNSIQNLDMKEINEAFEDNEISTGEQTDRFSSYDK 600
LREASKKLI KTS++NVG +N +EMNSIQNLDMKEINEAFED+E S GEQTDRFSS DK
Sbjct: 541 LREASKKLIKKTSERNVGIDNGAIEMNSIQNLDMKEINEAFEDHEFSAGEQTDRFSSCDK 600
Query: 601 DDFDINDDLSDASYNSETDSELEFDEDDLMLDENDGNLTDVLREDVNLASLKAAFDALDG 660
D+FD+NDD SDASYNSETDSELEF EDD + DE+DGNLTDVLRED ++ASLKAAFDALD
Sbjct: 601 DEFDVNDDASDASYNSETDSELEFSEDDALFDEDDGNLTDVLREDASMASLKAAFDALDE 660
Query: 661 KTAFDFDKIPSEQSKEEKSSAKQCGSVRMKEKGELDFSVGALHVLPLYAMLPATSQLRVF 720
K A FDKI + S + + AK+ S RMKE GEL F VGALHVLPLYAMLPA +QLRVF
Sbjct: 661 KVA--FDKIQVDHSTKGELPAKRV-SARMKENGELGFLVGALHVLPLYAMLPAAAQLRVF 720
Query: 721 EEVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKTYNSSNGIENYEVQWISKASAA 780
EEVKEG+RLVV+ATNVAETSLTIPGIKYVVDTGREKVKTYNSSNGIENYE+QWISKASAA
Sbjct: 721 EEVKEGDRLVVIATNVAETSLTIPGIKYVVDTGREKVKTYNSSNGIENYEIQWISKASAA 780
Query: 781 QRAGRAGRTGPGHCYRLYSSAVFSNIFPDFSLAEIAKVPVDGVVLLMKSMGISKVVNFPF 840
QRAGRAGRTGPGHCYRLYSSAVFSNIFPDFSLAEIAK+PVDGVVLLMKSMGISKVVNFPF
Sbjct: 781 QRAGRAGRTGPGHCYRLYSSAVFSNIFPDFSLAEIAKIPVDGVVLLMKSMGISKVVNFPF 840
Query: 841 PTPPETSAVLEAESCLKALEALDSDGRLTPLGKAMARYPLSPRHSRMLLTVIQIMKTLKN 900
PTPPETSAVLEAESCLKALEALD+DGRLTPLGKAMARYPLSPRHSRMLLTVIQIM+ LK
Sbjct: 841 PTPPETSAVLEAESCLKALEALDNDGRLTPLGKAMARYPLSPRHSRMLLTVIQIMRNLKT 900
Query: 901 YERANLVLAYSVAAAAALSMSNPFAIMFEGSQMKDDLEQNDRSSERADTKAEEKVEKSLK 960
Y+RANLVLAYSVAAAAALS SNPF +MFEGSQ+KDDLEQ DRS E ADTKAEEKVEKSLK
Sbjct: 901 YDRANLVLAYSVAAAAALSTSNPFVMMFEGSQVKDDLEQYDRSLELADTKAEEKVEKSLK 960
Query: 961 KKLKEAGKLSREKFSNPSCDALTIAYALQCFELSGSPAEFCNNYTLHLKTMQEMSKLRKQ 1020
KKLKEAGKLSREKFSNP+ DALTIAYALQCFELS S FCN YTLHLKTMQEMSKLRKQ
Sbjct: 961 KKLKEAGKLSREKFSNPTSDALTIAYALQCFELSESSVAFCNTYTLHLKTMQEMSKLRKQ 1020
Query: 1021 LLQLVFNHNGSSSAEFDFSWTSGTLEHVEDAWRIPSNKHPLSLNEEGIIGQAICAGWPDR 1080
LLQLVFNH+GS+ A+ DFSWT+GTLE VE+ WRIPSNKHPL LNEE IIGQAICAGWPDR
Sbjct: 1021 LLQLVFNHSGSAIADSDFSWTNGTLEDVENVWRIPSNKHPLLLNEEEIIGQAICAGWPDR 1080
Query: 1081 VAKRIREISKSADGDRRERTGKYQACMVKEAVFLHRRSSVSRSAPEFVVYNELLHTKRPY 1140
VAKRIREISKS + DR+ERTGKYQACMVKE VFL+RRSSVSRSAPEF+VYNELL TK+PY
Sbjct: 1081 VAKRIREISKSTEDDRKERTGKYQACMVKENVFLNRRSSVSRSAPEFLVYNELLRTKQPY 1140
Query: 1141 MHGLTSVKPDWLVKYASSLCAFSAPLTDPRPYYEPRNDTVFAWVAPAFGPHLWKLPLHNV 1200
MHGLTSVKP+WLVKYASSLC FSAPLTDPRPYY+P+NDTVF+WVAP FGPHLWKLPLHN
Sbjct: 1141 MHGLTSVKPNWLVKYASSLCTFSAPLTDPRPYYDPQNDTVFSWVAPTFGPHLWKLPLHNA 1200
Query: 1201 PIKDDVHGVGVFGCALLEGNVLPCLKSVRKFMAAPPSSILRPEALGQKRVGNLLSRLKSK 1260
PIKD+ HGV VF CALLEGNVLPCLK+VRKFMAAPPSSILRPEALGQKRVGNLLSRLKSK
Sbjct: 1201 PIKDNAHGVAVFACALLEGNVLPCLKNVRKFMAAPPSSILRPEALGQKRVGNLLSRLKSK 1260
Query: 1261 KIKSCATLREAWNDNPYELHSEILDWFQESYHSHFEELWSKMLCEVQEPQKRLSKKLKRA 1320
KI SCATLR W DNPYELHSEILDWFQESYHSHFE+LWS+MLCE++EP +RLS+KLKRA
Sbjct: 1261 KINSCATLRVVWKDNPYELHSEILDWFQESYHSHFEDLWSQMLCEIREPPERLSRKLKRA 1319
BLAST of Sed0026170 vs. ExPASy TrEMBL
Match:
A0A6J1JQ48 (ATP-dependent RNA helicase DEAH13 OS=Cucurbita maxima OX=3661 GN=LOC111487937 PE=4 SV=1)
HSP 1 Score: 2194.9 bits (5686), Expect = 0.0e+00
Identity = 1134/1322 (85.78%), Postives = 1206/1322 (91.23%), Query Frame = 0
Query: 1 MEDLLNDQLDCGNGSWSMDSGGSNQVIMYGSKKSDKKRKNMNKGCKGIQINKKPKLSKSQ 60
MEDL+NDQLDCG GSWS+D GGSNQVI+YGSKKSDKKRKN+NKGCKG QINKKPKLSKSQ
Sbjct: 1 MEDLVNDQLDCGKGSWSLDGGGSNQVILYGSKKSDKKRKNINKGCKGTQINKKPKLSKSQ 60
Query: 61 KKKVMKLEEEKEKSLLLSKSLGMLEKYKIPDDAFLLLRSTVSIGQSETRLGKRSRDIQFS 120
KKK+MKLE EKEKSLLLSKSL LEKYKIPDDAFLLLRS+VSIGQ ETRL KRSRDIQFS
Sbjct: 61 KKKMMKLEVEKEKSLLLSKSLETLEKYKIPDDAFLLLRSSVSIGQDETRLEKRSRDIQFS 120
Query: 121 KVGIEVPRNDHQLDKTDPDT--HENHFGSPDISPWHQLSAKVDEVLPFVSKREVSCGLDS 180
KVGIE PRN+ QL+KT DT HE+H GS +ISP HQLSA+ DE P + KREVSCGLDS
Sbjct: 121 KVGIEFPRNEQQLEKTCSDTSQHESHLGSLEISPRHQLSAEADEDCPCIEKREVSCGLDS 180
Query: 181 CQDLDNGTIVSNQGEVLSSLPNEDENICTLALEDGRDLSSAMCPDGGFKGPEIPDKKNVI 240
QDLD G +VSNQG+ LS+LP+E ENIC + LE GRDLS C DG FKGPEI D+++ I
Sbjct: 181 FQDLDGGNVVSNQGKSLSALPDEVENICAVVLESGRDLSCTTCTDGDFKGPEIMDERDKI 240
Query: 241 PNVETCKTYDPLPKLRLLSRPIVVPVLRPPEVEDRRKDLPIVMMEQEIMEAINENPIVII 300
P VE C T DPLP+LRLLSRPIVVPV RP EVED+RKDLPIVMMEQEIMEAINENPIVII
Sbjct: 241 PKVEICTTSDPLPELRLLSRPIVVPVSRPCEVEDKRKDLPIVMMEQEIMEAINENPIVII 300
Query: 301 CGETGCGKTTQVPQFLYEAGFGSLQSGHQRGTIGVTQPRRVAVLATAKRVAYELNVHLGK 360
CGETGCGKTTQVPQFLYEAGFGS QS HQRGTIGVTQPRRVAVLATAKRVAYEL VHLGK
Sbjct: 301 CGETGCGKTTQVPQFLYEAGFGSFQSSHQRGTIGVTQPRRVAVLATAKRVAYELGVHLGK 360
Query: 361 EVGFQVRYDKKIGDSSSIKFMTDGILLREVQHDFLLKRYSVLILDEAHERSMNTDILIGM 420
EVGFQVRYDKKIG SSSIKFMTDGILLREVQHDFLLKRYSVLILDEAHERSMNTDILIGM
Sbjct: 361 EVGFQVRYDKKIGGSSSIKFMTDGILLREVQHDFLLKRYSVLILDEAHERSMNTDILIGM 420
Query: 421 LSRVVKLRQDLHMKQQQMMLSGDNISPENMIFPLKLVLMSATLRVEDFISGGRLFHVSPP 480
LSRVVKLRQDLH+KQ+Q+MLSG ISPE+MIFPLKLVLMSATLRVEDFISGGRLFHVSPP
Sbjct: 421 LSRVVKLRQDLHVKQRQIMLSGGEISPEDMIFPLKLVLMSATLRVEDFISGGRLFHVSPP 480
Query: 481 IIEVPTRQYPVTVHFSRRTDTVDYIGQAYKKVLAIHKKLPPGGILVFVTGQREVENLCKK 540
IIEVPTRQYPVTVHFSRRTDTVDYIGQAYKKVLAIHKKLPPGGILVFVTGQREVEN+CKK
Sbjct: 481 IIEVPTRQYPVTVHFSRRTDTVDYIGQAYKKVLAIHKKLPPGGILVFVTGQREVENMCKK 540
Query: 541 LREASKKLIMKTSKKNVGNNNDNVEMNSIQNLDMKEINEAFEDNEISTGEQTDRFSSYDK 600
LREASKK I KTS++NVG +N +EMNSIQNLDMKEINEAFED+E S GEQTDRFSS DK
Sbjct: 541 LREASKKWIKKTSERNVGIDNGAIEMNSIQNLDMKEINEAFEDHEFSAGEQTDRFSSCDK 600
Query: 601 DDFDINDDLSDASYNSETDSELEFDEDDLMLDENDGNLTDVLREDVNLASLKAAFDALDG 660
D+ D+NDD SDASYNSETDSELEF EDD + DE+DGNLTDVLRED ++ASLKAAFDALDG
Sbjct: 601 DELDVNDDASDASYNSETDSELEFSEDDALFDEDDGNLTDVLREDASMASLKAAFDALDG 660
Query: 661 KTAFDFDKIPSEQSKEEKSSAKQCGSVRMKEKGELDFSVGALHVLPLYAMLPATSQLRVF 720
K A FDKI + S + + AK+ S RMKE GEL F VGALHVLPLYAMLPA +QLRVF
Sbjct: 661 KVA--FDKIQVDHSTKGELPAKRV-SARMKENGELGFLVGALHVLPLYAMLPAAAQLRVF 720
Query: 721 EEVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKTYNSSNGIENYEVQWISKASAA 780
EEVKE +RLVV+ATNVAETSLTIPGIKYVVDTGREKVKTYNSSNGIENYE+QWISKASAA
Sbjct: 721 EEVKERDRLVVIATNVAETSLTIPGIKYVVDTGREKVKTYNSSNGIENYEIQWISKASAA 780
Query: 781 QRAGRAGRTGPGHCYRLYSSAVFSNIFPDFSLAEIAKVPVDGVVLLMKSMGISKVVNFPF 840
QRAGRAGRTGPGHCYRLYSSAVFSNIFPDFSLAEIAK+PVDGVVLLMKSMGISKVVNFPF
Sbjct: 781 QRAGRAGRTGPGHCYRLYSSAVFSNIFPDFSLAEIAKIPVDGVVLLMKSMGISKVVNFPF 840
Query: 841 PTPPETSAVLEAESCLKALEALDSDGRLTPLGKAMARYPLSPRHSRMLLTVIQIMKTLKN 900
PTPPETSAVLEAESCLKALEALD+DGRLTPLGKAMARYPLSPRHSRMLLTVIQIM+ LK
Sbjct: 841 PTPPETSAVLEAESCLKALEALDNDGRLTPLGKAMARYPLSPRHSRMLLTVIQIMRNLKT 900
Query: 901 YERANLVLAYSVAAAAALSMSNPFAIMFEGSQMKDDLEQNDRSSERADTKAEEKVEKSLK 960
Y+RANLVLAY VAAAAALS SNPF +MFEGSQMKDDL+Q DRS E ADTKAEEKVEKSLK
Sbjct: 901 YDRANLVLAYCVAAAAALSTSNPFVMMFEGSQMKDDLDQYDRSLELADTKAEEKVEKSLK 960
Query: 961 KKLKEAGKLSREKFSNPSCDALTIAYALQCFELSGSPAEFCNNYTLHLKTMQEMSKLRKQ 1020
KKLKEAGKLSREKFSNP+ DALTIAYALQCFELS SP FCN YTLHLKTMQEMSKLRKQ
Sbjct: 961 KKLKEAGKLSREKFSNPTSDALTIAYALQCFELSESPVAFCNTYTLHLKTMQEMSKLRKQ 1020
Query: 1021 LLQLVFNHNGSSSAEFDFSWTSGTLEHVEDAWRIPSNKHPLSLNEEGIIGQAICAGWPDR 1080
LLQLVFNH+GS+ A+ DFSWT+GTLE VED WRIPSNKHPL LNEE IIGQAICAGWPDR
Sbjct: 1021 LLQLVFNHSGSAIADSDFSWTNGTLEDVEDVWRIPSNKHPLLLNEEEIIGQAICAGWPDR 1080
Query: 1081 VAKRIREISKSADGDRRERTGKYQACMVKEAVFLHRRSSVSRSAPEFVVYNELLHTKRPY 1140
VAKRIREISKS + DR+ERTGKYQACMVKE VFL+R+SSVSRSAPEF+VYNELL TKRPY
Sbjct: 1081 VAKRIREISKSTEDDRKERTGKYQACMVKENVFLNRQSSVSRSAPEFLVYNELLRTKRPY 1140
Query: 1141 MHGLTSVKPDWLVKYASSLCAFSAPLTDPRPYYEPRNDTVFAWVAPAFGPHLWKLPLHNV 1200
MHGLTSVKP+WLVKYASSLC FSAPLTDPRPYY+P+NDTVF+WVAP FGPHLWKLPLHN
Sbjct: 1141 MHGLTSVKPNWLVKYASSLCTFSAPLTDPRPYYDPQNDTVFSWVAPTFGPHLWKLPLHNA 1200
Query: 1201 PIKDDVHGVGVFGCALLEGNVLPCLKSVRKFMAAPPSSILRPEALGQKRVGNLLSRLKSK 1260
PIKD+ HGV VF CALLEGNVLPCLK VRKF+AAPPSSILRPEALGQKRVGNLLSRLKSK
Sbjct: 1201 PIKDNAHGVAVFACALLEGNVLPCLKYVRKFLAAPPSSILRPEALGQKRVGNLLSRLKSK 1260
Query: 1261 KIKSCATLREAWNDNPYELHSEILDWFQESYHSHFEELWSKMLCEVQEPQKRLSKKLKRA 1320
KI SCATLR W DNPYELHSEILDWFQESYHSHFE+LWS+MLCEVQEP +RLS+KLKRA
Sbjct: 1261 KITSCATLRVVWKDNPYELHSEILDWFQESYHSHFEDLWSQMLCEVQEPPERLSRKLKRA 1319
BLAST of Sed0026170 vs. ExPASy TrEMBL
Match:
A0A1S3BRN5 (ATP-dependent RNA helicase DEAH13 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492788 PE=4 SV=1)
HSP 1 Score: 2095.5 bits (5428), Expect = 0.0e+00
Identity = 1092/1324 (82.48%), Postives = 1180/1324 (89.12%), Query Frame = 0
Query: 1 MEDLLNDQLDCGNGSWSMDSGGSNQVIMYGSKKSDKKRKNMNKGCKGIQINKKPKLSKSQ 60
MEDL+NDQLDCG GSWS+D GGSNQV++YGSKKSDKKRKN NKGCKGIQ+NKKPKLSKSQ
Sbjct: 1 MEDLVNDQLDCGKGSWSLDGGGSNQVMLYGSKKSDKKRKNTNKGCKGIQLNKKPKLSKSQ 60
Query: 61 KKKVMKLEEEKEKSLLLSKSLGMLEKYKIPDDAFLLLRSTVSIGQSETRLGKRSRDIQFS 120
K+K+MKLEEEKEKSLLLSKSL LEKYKI DDAFLLLRS+V+IG+ ETRL KRSRDIQFS
Sbjct: 61 KRKIMKLEEEKEKSLLLSKSLETLEKYKISDDAFLLLRSSVNIGKDETRLEKRSRDIQFS 120
Query: 121 KVGIEVPRNDHQLDKTDPD--THENHFGSPDISPWHQLSAKVDEVLPFVSKREVSCGLDS 180
KVGIEVP ND QLD+T D +E+H GS DISP HQLSA DE PFV+++EV+CGLDS
Sbjct: 121 KVGIEVPGNDQQLDRTSSDISQYESHCGSLDISPCHQLSANADEDDPFVAEKEVTCGLDS 180
Query: 181 CQDLDNGTIVSNQGEVLSSLPNEDENICTLALEDGRDLSSAMCPDGGFKGPEIPDKKNVI 240
+DL + TIV N G+ LSSLP+E E LED RDLS MC GGFKGPEI DK++ I
Sbjct: 181 FKDLGDDTIVPNDGKALSSLPDEVEKTGAALLEDERDLSGTMCAVGGFKGPEITDKEDGI 240
Query: 241 PNVETCKTYDPLPKLRLLSRPIVVPVLRPPEVEDRRKDLPIVMMEQEIMEAINENPIVII 300
P VE C T +PLP++RLLS+PIVVPV RP EVED+RKDLPIVMMEQEIMEAINENPIVII
Sbjct: 241 PKVEICTTSNPLPEMRLLSKPIVVPVSRPCEVEDKRKDLPIVMMEQEIMEAINENPIVII 300
Query: 301 CGETGCGKTTQVPQFLYEAGFGSLQSGHQRGTIGVTQPRRVAVLATAKRVAYELNVHLGK 360
CGETGCGKTTQVPQFLYEAGFGS QS HQRG IGVTQPRRVAVLATAKRVAYEL V LGK
Sbjct: 301 CGETGCGKTTQVPQFLYEAGFGSSQSSHQRGAIGVTQPRRVAVLATAKRVAYELGVRLGK 360
Query: 361 EVGFQVRYDKKIGDSSSIKFMTDGILLREVQHDFLLKRYSVLILDEAHERSMNTDILIGM 420
EVGFQVRYDKKIGDSSSIKFMTDGILLREVQHDFLLKRYSVLILDEAHERSMNTDILIGM
Sbjct: 361 EVGFQVRYDKKIGDSSSIKFMTDGILLREVQHDFLLKRYSVLILDEAHERSMNTDILIGM 420
Query: 421 LSRVVKLRQDLHMKQQQMMLSGDNISPENMIFPLKLVLMSATLRVEDFISGGRLFHVSPP 480
LSRVVKLRQDLHMKQ+Q++LSG IS E+MIFPLKLVLMSATLRVEDFISGGRLFHVSPP
Sbjct: 421 LSRVVKLRQDLHMKQRQIILSGGKISLEDMIFPLKLVLMSATLRVEDFISGGRLFHVSPP 480
Query: 481 IIEVPTRQYPVTVHFSRRTDTVDYIGQAYKKVLAIHKKLPPGGILVFVTGQREVENLCKK 540
IIEVPTRQ+PVTVHFS+RTD VDYIGQAYKKVLAIHKKLPPGGILVFVTGQREVENLCKK
Sbjct: 481 IIEVPTRQFPVTVHFSKRTDIVDYIGQAYKKVLAIHKKLPPGGILVFVTGQREVENLCKK 540
Query: 541 LREASKKLIMKTSKKNVGNNNDNVEMNSIQNLDMKEINEAFEDNEISTGEQTDRFSSYDK 600
LREASKKL+ KTS++N NNN VE NSIQNLDM EINEAFED E S EQTDRFSS+DK
Sbjct: 541 LREASKKLMKKTSERNGENNNGIVETNSIQNLDMNEINEAFEDREFSI-EQTDRFSSFDK 600
Query: 601 DDFDINDDLSDASYNSETDSELEFDEDDLMLDENDGNLTDVLREDVNLASLKAAFDALDG 660
D+FDINDD+SDASYNS +DSELEF+E D M DE DG+LTDV+ +D +++SLKAAFDALD
Sbjct: 601 DEFDINDDVSDASYNSGSDSELEFNE-DAMSDETDGHLTDVIMDDASMSSLKAAFDALDR 660
Query: 661 KTAFDFDKIPSEQSKEEKSSAKQCGSVRMKEKGELDFSVGALHVLPLYAMLPATSQLRVF 720
K A D DK + + +E S+KQC S R+KE E F VGALHVLPLYAMLPA +QLRVF
Sbjct: 661 KNALDLDKRQVDHTTDEDLSSKQCVSARLKENVEFGFPVGALHVLPLYAMLPAAAQLRVF 720
Query: 721 EEVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKTYNSSNGIENYEVQWISKASAA 780
EEVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKTYNSSNGIENYEVQWISKASAA
Sbjct: 721 EEVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKTYNSSNGIENYEVQWISKASAA 780
Query: 781 QRAGRAGRTGPGHCYRLYSSAVFSNIFPDFSLAEIAKVPVDGVVLLMKSMGISKVVNFPF 840
QRAGRAGRTGPGHCYRLYSSAVFSN PDFSLAEIAK+PVDGVVLLMKSMGISKVVNFPF
Sbjct: 781 QRAGRAGRTGPGHCYRLYSSAVFSNTLPDFSLAEIAKIPVDGVVLLMKSMGISKVVNFPF 840
Query: 841 PTPPETSAVLEAESCLKALEALDSDGRLTPLGKAMARYPLSPRHSRMLLTVIQIMKTLKN 900
PTPPETSAVLEAESCLKALEALDS GRLT LGKAMA+YPLSPRHSRMLLTVIQIMK LKN
Sbjct: 841 PTPPETSAVLEAESCLKALEALDSGGRLTALGKAMAQYPLSPRHSRMLLTVIQIMKNLKN 900
Query: 901 YERANLVLAYSVAAAAALSMSNPFAIMFEGSQMKDDLEQNDRSSERADTKAEEKVEKSLK 960
Y+RANLVLAYSVA+AAALS SNPF +MFEGSQMKD+LEQNDRS E DTK EEKVEKSLK
Sbjct: 901 YDRANLVLAYSVASAAALSTSNPFVMMFEGSQMKDELEQNDRSFELGDTKTEEKVEKSLK 960
Query: 961 KKLKEAGKLSREKFSNPSCDALTIAYALQCFELSGSPAEFCNNYTLHLKTMQEMSKLRKQ 1020
KKLKEAGKLSREKFS+ S DALT+AYALQCFELS +P FCNNYTLHLKTMQEMSKLRKQ
Sbjct: 961 KKLKEAGKLSREKFSDHSSDALTVAYALQCFELSETPVAFCNNYTLHLKTMQEMSKLRKQ 1020
Query: 1021 LLQLVFNHNGSSSAEFDFSWTSGTLEHVEDAWRIPSNKHPLSLNEEGIIGQAICAGWPDR 1080
LL+LVFNH+ SS AE DFSWT+G LE VE WR+PSNKHPLSL E+ IIGQAICAGWPDR
Sbjct: 1021 LLKLVFNHSRSSIAESDFSWTNGALEDVEAMWRVPSNKHPLSLKEKEIIGQAICAGWPDR 1080
Query: 1081 VAKRIREISKSADGDRRERTGKYQACMVKEAVFLHRRSSVSRSAPEFVVYNELLHTKRPY 1140
VAKRIREISKS + DR+ER GKYQACMVKE VF++R SSVSRSAP+F+VYNELL TKRPY
Sbjct: 1081 VAKRIREISKSVEADRKERAGKYQACMVKENVFVNRGSSVSRSAPKFLVYNELLRTKRPY 1140
Query: 1141 MHGLTSVKPDWLVKYASSLCAFSAPLTDPRPYYEPRNDTVFAWVAPAFGPHLWKLPLHNV 1200
MHGLTSV+PDWLVKYASSLCAFSAPLTDP+PYY+ +NDTV++WVAP FGPHLW+LPLHNV
Sbjct: 1141 MHGLTSVQPDWLVKYASSLCAFSAPLTDPKPYYDSQNDTVYSWVAPTFGPHLWELPLHNV 1200
Query: 1201 PIKDDVHGVGVFGCALLEGNVLPCLKSVRKFMAAPPSSILRPEALGQKRVGNLLSRLKSK 1260
PIKD+ GV VF CALL+G VLPCL SVR+FMAA P SILRPEALGQKRVGNLLSRLKSK
Sbjct: 1201 PIKDNAQGVAVFACALLKGKVLPCLTSVREFMAARPGSILRPEALGQKRVGNLLSRLKSK 1260
Query: 1261 KIKSCATLREAWNDNPYELHSEILDWFQESYHSHFEELWSKMLCEVQEPQKRLSKKLKRA 1320
KI S ATLR W DNPYELHSEILDWFQ+SYHSHFE+LWS+MLCEVQ PQKRL KKL RA
Sbjct: 1261 KINSRATLRAVWKDNPYELHSEILDWFQKSYHSHFEDLWSQMLCEVQLPQKRLIKKLGRA 1320
Query: 1321 KKNK 1323
K+ K
Sbjct: 1321 KEKK 1322
BLAST of Sed0026170 vs. ExPASy TrEMBL
Match:
A0A0A0K680 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G405840 PE=4 SV=1)
HSP 1 Score: 2079.7 bits (5387), Expect = 0.0e+00
Identity = 1084/1324 (81.87%), Postives = 1182/1324 (89.27%), Query Frame = 0
Query: 1 MEDLLNDQLDCGNGSWSMDSGGSNQVIMYGSKKSDKKRKNMNKGCKGIQINKKPKLSKSQ 60
MEDL+NDQLDCG GSWS+D GGSNQV++YGSK+SDKKRKN NKGCKGIQ+NKKPKLSKSQ
Sbjct: 1 MEDLVNDQLDCGKGSWSLDGGGSNQVMLYGSKRSDKKRKNPNKGCKGIQLNKKPKLSKSQ 60
Query: 61 KKKVMKLEEEKEKSLLLSKSLGMLEKYKIPDDAFLLLRSTVSIGQSETRLGKRSRDIQFS 120
K+K+MKLEEEKEKSLLLSKSL LEKYKI DDAFLLLRS+V+IG+ ETRL KRSRDIQFS
Sbjct: 61 KRKIMKLEEEKEKSLLLSKSLETLEKYKISDDAFLLLRSSVNIGKDETRLEKRSRDIQFS 120
Query: 121 KVGIEVPRNDHQLDKTDPD--THENHFGSPDISPWHQLSAKVDEVLPFVSKREVSCGLDS 180
KVGIEVP ND QLDKT D +E+H GS DISP HQLSA DE PFV+++EV+ GLDS
Sbjct: 121 KVGIEVPGNDQQLDKTSSDISQYESHCGSLDISPCHQLSANADEDGPFVAEKEVTRGLDS 180
Query: 181 CQDLDNGTIVSNQGEVLSSLPNEDENICTLALEDGRDLSSAMCPDGGFKGPEIPDKKNVI 240
+DLDN TIV N G+ LSSLP++ EN + LED RDLS MC GGFK PEI DK++ I
Sbjct: 181 FKDLDNDTIVPNDGKSLSSLPDKVENTGAVLLEDERDLSCTMCTVGGFKEPEIMDKEDGI 240
Query: 241 PNVETCKTYDPLPKLRLLSRPIVVPVLRPPEVEDRRKDLPIVMMEQEIMEAINENPIVII 300
P VE C T + LP++RLLS+PIVVPV RP EVED+RKDLPIVMMEQEIMEAINENPIVII
Sbjct: 241 PKVEICTTSNLLPEMRLLSKPIVVPVSRPCEVEDKRKDLPIVMMEQEIMEAINENPIVII 300
Query: 301 CGETGCGKTTQVPQFLYEAGFGSLQSGHQRGTIGVTQPRRVAVLATAKRVAYELNVHLGK 360
CGETGCGKTTQVPQFLYEAGFGS QS HQRG IGVTQPRRVAVLATAKRVAYEL V LGK
Sbjct: 301 CGETGCGKTTQVPQFLYEAGFGSSQSSHQRGAIGVTQPRRVAVLATAKRVAYELGVRLGK 360
Query: 361 EVGFQVRYDKKIGDSSSIKFMTDGILLREVQHDFLLKRYSVLILDEAHERSMNTDILIGM 420
EVGFQVRYDKKIGD+SSIKFMTDGILLREVQHDFLLKRYSVLILDEAHERSMNTDILIGM
Sbjct: 361 EVGFQVRYDKKIGDTSSIKFMTDGILLREVQHDFLLKRYSVLILDEAHERSMNTDILIGM 420
Query: 421 LSRVVKLRQDLHMKQQQMMLSGDNISPENMIFPLKLVLMSATLRVEDFISGGRLFHVSPP 480
LSRVVKLRQDLHMKQ+Q+ LSG ISPENMIFPLKLVLMSATLRVEDF+SGGRLFHVSPP
Sbjct: 421 LSRVVKLRQDLHMKQRQLTLSGGKISPENMIFPLKLVLMSATLRVEDFVSGGRLFHVSPP 480
Query: 481 IIEVPTRQYPVTVHFSRRTDTVDYIGQAYKKVLAIHKKLPPGGILVFVTGQREVENLCKK 540
IIEVPTRQ+PVTVHFS+RTD VDYIGQAYKKV+AIHKKLPPGGILVFVTGQREVENLCKK
Sbjct: 481 IIEVPTRQFPVTVHFSKRTDIVDYIGQAYKKVMAIHKKLPPGGILVFVTGQREVENLCKK 540
Query: 541 LREASKKLIMKTSKKNVGNNNDNVEMNSIQNLDMKEINEAFEDNEISTGEQTDRFSSYDK 600
LREASKKLI KTS+++ NNN VEMNSIQNLDM EINEAFED+E S EQTDRFSS+DK
Sbjct: 541 LREASKKLIKKTSERHGENNNGIVEMNSIQNLDMNEINEAFEDHEFSI-EQTDRFSSFDK 600
Query: 601 DDFDINDDLSDASYNSETDSELEFDEDDLMLDENDGNLTDVLREDVNLASLKAAFDALDG 660
D+FDINDD+SDASYNSE+DSELEF+E D M DE DGNLTDV+ +D +++SLKAAFDALD
Sbjct: 601 DEFDINDDVSDASYNSESDSELEFNE-DAMSDETDGNLTDVVMDDASMSSLKAAFDALDR 660
Query: 661 KTAFDFDKIPSEQSKEEKSSAKQCGSVRMKEKGELDFSVGALHVLPLYAMLPATSQLRVF 720
K A D DK + + +E S+KQC S R+KE E FSVGALHVLPLYAMLPA +QLRVF
Sbjct: 661 KNALDLDKRQVDHTTDEDLSSKQCVSARLKENVEFGFSVGALHVLPLYAMLPAAAQLRVF 720
Query: 721 EEVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKTYNSSNGIENYEVQWISKASAA 780
EEVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKTYNSSNGIENYEVQWISKASAA
Sbjct: 721 EEVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKTYNSSNGIENYEVQWISKASAA 780
Query: 781 QRAGRAGRTGPGHCYRLYSSAVFSNIFPDFSLAEIAKVPVDGVVLLMKSMGISKVVNFPF 840
QRAGRAGRTGPGHCYRLYSSAVFSN PDFSLAEIAK+PVDGVVLLMKSMGISKVVNFPF
Sbjct: 781 QRAGRAGRTGPGHCYRLYSSAVFSNTLPDFSLAEIAKIPVDGVVLLMKSMGISKVVNFPF 840
Query: 841 PTPPETSAVLEAESCLKALEALDSDGRLTPLGKAMARYPLSPRHSRMLLTVIQIMKTLKN 900
PTPPETSAVLEAESCLKALEALDS GRLT LGKAMA+YPLSPRHSRMLLTVIQIM+ LKN
Sbjct: 841 PTPPETSAVLEAESCLKALEALDSGGRLTALGKAMAQYPLSPRHSRMLLTVIQIMRNLKN 900
Query: 901 YERANLVLAYSVAAAAALSMSNPFAIMFEGSQMKDDLEQNDRSSERADTKAEEKVEKSLK 960
Y+RANLVLAYSVAAAAALSMSNPF +MFEGSQ+ D++EQNDRS DTK EEKVEKSLK
Sbjct: 901 YDRANLVLAYSVAAAAALSMSNPFVMMFEGSQINDEVEQNDRSF--GDTKTEEKVEKSLK 960
Query: 961 KKLKEAGKLSREKFSNPSCDALTIAYALQCFELSGSPAEFCNNYTLHLKTMQEMSKLRKQ 1020
KKLKEAGKLSREKFS+ S DALT+AYALQCFE S +P FCNN+TLHLKTMQEMSKLRKQ
Sbjct: 961 KKLKEAGKLSREKFSDHSSDALTVAYALQCFEHSETPVAFCNNFTLHLKTMQEMSKLRKQ 1020
Query: 1021 LLQLVFNHNGSSSAEFDFSWTSGTLEHVEDAWRIPSNKHPLSLNEEGIIGQAICAGWPDR 1080
LL+LVFNH+ SS AE +FSWT+G LE VE WR+PSNKHPLSL E+ IIGQAICAGWPDR
Sbjct: 1021 LLKLVFNHSRSSIAESEFSWTNGVLEDVEAMWRVPSNKHPLSLKEKEIIGQAICAGWPDR 1080
Query: 1081 VAKRIREISKSADGDRRERTGKYQACMVKEAVFLHRRSSVSRSAPEFVVYNELLHTKRPY 1140
VAKRIREISKS + DR+ER GKYQACMVKE VF++R SSVSRSAP+F+VYNELL TKRPY
Sbjct: 1081 VAKRIREISKSVEADRKERAGKYQACMVKENVFVNRWSSVSRSAPKFLVYNELLRTKRPY 1140
Query: 1141 MHGLTSVKPDWLVKYASSLCAFSAPLTDPRPYYEPRNDTVFAWVAPAFGPHLWKLPLHNV 1200
MHGLTSV+PDWLVKYASSLCAFSAPLTDP+PYY+ +NDTV++WVAP FGPHLW+LPLHNV
Sbjct: 1141 MHGLTSVQPDWLVKYASSLCAFSAPLTDPKPYYDSQNDTVYSWVAPTFGPHLWELPLHNV 1200
Query: 1201 PIKDDVHGVGVFGCALLEGNVLPCLKSVRKFMAAPPSSILRPEALGQKRVGNLLSRLKSK 1260
PIKD+ GV VF CALL+G VLPCL SV +F+AA PSSILRPEALGQKRVGNLLS+L+SK
Sbjct: 1201 PIKDNAQGVAVFACALLKGKVLPCLTSVSEFLAARPSSILRPEALGQKRVGNLLSKLRSK 1260
Query: 1261 KIKSCATLREAWNDNPYELHSEILDWFQESYHSHFEELWSKMLCEVQEPQKRLSKKLKRA 1320
KI S ATLR W DNPYELH EILDWFQ+SYHSHFE+LWS+MLCEVQ PQKRL KKL+RA
Sbjct: 1261 KINSRATLRAVWKDNPYELHLEILDWFQKSYHSHFEDLWSQMLCEVQLPQKRLIKKLERA 1320
Query: 1321 KKNK 1323
K+ K
Sbjct: 1321 KEKK 1320
BLAST of Sed0026170 vs. ExPASy TrEMBL
Match:
A0A1S3BSH7 (ATP-dependent RNA helicase DEAH13 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492788 PE=4 SV=1)
HSP 1 Score: 2068.1 bits (5357), Expect = 0.0e+00
Identity = 1083/1324 (81.80%), Postives = 1168/1324 (88.22%), Query Frame = 0
Query: 1 MEDLLNDQLDCGNGSWSMDSGGSNQVIMYGSKKSDKKRKNMNKGCKGIQINKKPKLSKSQ 60
MEDL+NDQLDCG GSWS+D GGSNQV++YGSKKSDKKRKN NKGCKGIQ+NKKPKLSKSQ
Sbjct: 1 MEDLVNDQLDCGKGSWSLDGGGSNQVMLYGSKKSDKKRKNTNKGCKGIQLNKKPKLSKSQ 60
Query: 61 KKKVMKLEEEKEKSLLLSKSLGMLEKYKIPDDAFLLLRSTVSIGQSETRLGKRSRDIQFS 120
K+K+MKLEEEKEKSLLLSKSL LEKYKI DDAFLLLRS+V+IG+ ETRL KRSRDIQFS
Sbjct: 61 KRKIMKLEEEKEKSLLLSKSLETLEKYKISDDAFLLLRSSVNIGKDETRLEKRSRDIQFS 120
Query: 121 KVGIEVPRNDHQLDKTDPD--THENHFGSPDISPWHQLSAKVDEVLPFVSKREVSCGLDS 180
KVGIEVP ND QLD+T D +E+H GS DISP HQLSA DE PFV+++EV+CGLDS
Sbjct: 121 KVGIEVPGNDQQLDRTSSDISQYESHCGSLDISPCHQLSANADEDDPFVAEKEVTCGLDS 180
Query: 181 CQDLDNGTIVSNQGEVLSSLPNEDENICTLALEDGRDLSSAMCPDGGFKGPEIPDKKNVI 240
+DLD E E LED RDLS MC GGFKGPEI DK++ I
Sbjct: 181 FKDLD-----------------EVEKTGAALLEDERDLSGTMCAVGGFKGPEITDKEDGI 240
Query: 241 PNVETCKTYDPLPKLRLLSRPIVVPVLRPPEVEDRRKDLPIVMMEQEIMEAINENPIVII 300
P VE C T +PLP++RLLS+PIVVPV RP EVED+RKDLPIVMMEQEIMEAINENPIVII
Sbjct: 241 PKVEICTTSNPLPEMRLLSKPIVVPVSRPCEVEDKRKDLPIVMMEQEIMEAINENPIVII 300
Query: 301 CGETGCGKTTQVPQFLYEAGFGSLQSGHQRGTIGVTQPRRVAVLATAKRVAYELNVHLGK 360
CGETGCGKTTQVPQFLYEAGFGS QS HQRG IGVTQPRRVAVLATAKRVAYEL V LGK
Sbjct: 301 CGETGCGKTTQVPQFLYEAGFGSSQSSHQRGAIGVTQPRRVAVLATAKRVAYELGVRLGK 360
Query: 361 EVGFQVRYDKKIGDSSSIKFMTDGILLREVQHDFLLKRYSVLILDEAHERSMNTDILIGM 420
EVGFQVRYDKKIGDSSSIKFMTDGILLREVQHDFLLKRYSVLILDEAHERSMNTDILIGM
Sbjct: 361 EVGFQVRYDKKIGDSSSIKFMTDGILLREVQHDFLLKRYSVLILDEAHERSMNTDILIGM 420
Query: 421 LSRVVKLRQDLHMKQQQMMLSGDNISPENMIFPLKLVLMSATLRVEDFISGGRLFHVSPP 480
LSRVVKLRQDLHMKQ+Q++LSG IS E+MIFPLKLVLMSATLRVEDFISGGRLFHVSPP
Sbjct: 421 LSRVVKLRQDLHMKQRQIILSGGKISLEDMIFPLKLVLMSATLRVEDFISGGRLFHVSPP 480
Query: 481 IIEVPTRQYPVTVHFSRRTDTVDYIGQAYKKVLAIHKKLPPGGILVFVTGQREVENLCKK 540
IIEVPTRQ+PVTVHFS+RTD VDYIGQAYKKVLAIHKKLPPGGILVFVTGQREVENLCKK
Sbjct: 481 IIEVPTRQFPVTVHFSKRTDIVDYIGQAYKKVLAIHKKLPPGGILVFVTGQREVENLCKK 540
Query: 541 LREASKKLIMKTSKKNVGNNNDNVEMNSIQNLDMKEINEAFEDNEISTGEQTDRFSSYDK 600
LREASKKL+ KTS++N NNN VE NSIQNLDM EINEAFED E S EQTDRFSS+DK
Sbjct: 541 LREASKKLMKKTSERNGENNNGIVETNSIQNLDMNEINEAFEDREFSI-EQTDRFSSFDK 600
Query: 601 DDFDINDDLSDASYNSETDSELEFDEDDLMLDENDGNLTDVLREDVNLASLKAAFDALDG 660
D+FDINDD+SDASYNS +DSELEF+E D M DE DG+LTDV+ +D +++SLKAAFDALD
Sbjct: 601 DEFDINDDVSDASYNSGSDSELEFNE-DAMSDETDGHLTDVIMDDASMSSLKAAFDALDR 660
Query: 661 KTAFDFDKIPSEQSKEEKSSAKQCGSVRMKEKGELDFSVGALHVLPLYAMLPATSQLRVF 720
K A D DK + + +E S+KQC S R+KE E F VGALHVLPLYAMLPA +QLRVF
Sbjct: 661 KNALDLDKRQVDHTTDEDLSSKQCVSARLKENVEFGFPVGALHVLPLYAMLPAAAQLRVF 720
Query: 721 EEVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKTYNSSNGIENYEVQWISKASAA 780
EEVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKTYNSSNGIENYEVQWISKASAA
Sbjct: 721 EEVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKTYNSSNGIENYEVQWISKASAA 780
Query: 781 QRAGRAGRTGPGHCYRLYSSAVFSNIFPDFSLAEIAKVPVDGVVLLMKSMGISKVVNFPF 840
QRAGRAGRTGPGHCYRLYSSAVFSN PDFSLAEIAK+PVDGVVLLMKSMGISKVVNFPF
Sbjct: 781 QRAGRAGRTGPGHCYRLYSSAVFSNTLPDFSLAEIAKIPVDGVVLLMKSMGISKVVNFPF 840
Query: 841 PTPPETSAVLEAESCLKALEALDSDGRLTPLGKAMARYPLSPRHSRMLLTVIQIMKTLKN 900
PTPPETSAVLEAESCLKALEALDS GRLT LGKAMA+YPLSPRHSRMLLTVIQIMK LKN
Sbjct: 841 PTPPETSAVLEAESCLKALEALDSGGRLTALGKAMAQYPLSPRHSRMLLTVIQIMKNLKN 900
Query: 901 YERANLVLAYSVAAAAALSMSNPFAIMFEGSQMKDDLEQNDRSSERADTKAEEKVEKSLK 960
Y+RANLVLAYSVA+AAALS SNPF +MFEGSQMKD+LEQNDRS E DTK EEKVEKSLK
Sbjct: 901 YDRANLVLAYSVASAAALSTSNPFVMMFEGSQMKDELEQNDRSFELGDTKTEEKVEKSLK 960
Query: 961 KKLKEAGKLSREKFSNPSCDALTIAYALQCFELSGSPAEFCNNYTLHLKTMQEMSKLRKQ 1020
KKLKEAGKLSREKFS+ S DALT+AYALQCFELS +P FCNNYTLHLKTMQEMSKLRKQ
Sbjct: 961 KKLKEAGKLSREKFSDHSSDALTVAYALQCFELSETPVAFCNNYTLHLKTMQEMSKLRKQ 1020
Query: 1021 LLQLVFNHNGSSSAEFDFSWTSGTLEHVEDAWRIPSNKHPLSLNEEGIIGQAICAGWPDR 1080
LL+LVFNH+ SS AE DFSWT+G LE VE WR+PSNKHPLSL E+ IIGQAICAGWPDR
Sbjct: 1021 LLKLVFNHSRSSIAESDFSWTNGALEDVEAMWRVPSNKHPLSLKEKEIIGQAICAGWPDR 1080
Query: 1081 VAKRIREISKSADGDRRERTGKYQACMVKEAVFLHRRSSVSRSAPEFVVYNELLHTKRPY 1140
VAKRIREISKS + DR+ER GKYQACMVKE VF++R SSVSRSAP+F+VYNELL TKRPY
Sbjct: 1081 VAKRIREISKSVEADRKERAGKYQACMVKENVFVNRGSSVSRSAPKFLVYNELLRTKRPY 1140
Query: 1141 MHGLTSVKPDWLVKYASSLCAFSAPLTDPRPYYEPRNDTVFAWVAPAFGPHLWKLPLHNV 1200
MHGLTSV+PDWLVKYASSLCAFSAPLTDP+PYY+ +NDTV++WVAP FGPHLW+LPLHNV
Sbjct: 1141 MHGLTSVQPDWLVKYASSLCAFSAPLTDPKPYYDSQNDTVYSWVAPTFGPHLWELPLHNV 1200
Query: 1201 PIKDDVHGVGVFGCALLEGNVLPCLKSVRKFMAAPPSSILRPEALGQKRVGNLLSRLKSK 1260
PIKD+ GV VF CALL+G VLPCL SVR+FMAA P SILRPEALGQKRVGNLLSRLKSK
Sbjct: 1201 PIKDNAQGVAVFACALLKGKVLPCLTSVREFMAARPGSILRPEALGQKRVGNLLSRLKSK 1260
Query: 1261 KIKSCATLREAWNDNPYELHSEILDWFQESYHSHFEELWSKMLCEVQEPQKRLSKKLKRA 1320
KI S ATLR W DNPYELHSEILDWFQ+SYHSHFE+LWS+MLCEVQ PQKRL KKL RA
Sbjct: 1261 KINSRATLRAVWKDNPYELHSEILDWFQKSYHSHFEDLWSQMLCEVQLPQKRLIKKLGRA 1305
Query: 1321 KKNK 1323
K+ K
Sbjct: 1321 KEKK 1305
BLAST of Sed0026170 vs. TAIR 10
Match:
AT1G33390.1 (RNA helicase family protein )
HSP 1 Score: 1198.0 bits (3098), Expect = 0.0e+00
Identity = 695/1281 (54.25%), Postives = 869/1281 (67.84%), Query Frame = 0
Query: 31 SKKSDKKRKNMNKGCK-----GIQINKKPKLSKSQKKKVMKLEEEKEKSLLLSKSLGMLE 90
+K DK N N G K + N KSQK+K+ KLEE+KEK +L SK+ +L+
Sbjct: 25 NKMQDKLNSNNNTGSKKSRKRKLNSNVNTVACKSQKRKLKKLEEDKEKEILFSKTAELLD 84
Query: 91 KYKIPDDAFLLLRSTVSIGQSETRLGKRSRDIQFSKVGIEVPRNDHQLDKTDPDTHENHF 150
KYKI +D LL+S+ IG+S T+L KR R +Q SK G+E +D +++ D D ++
Sbjct: 85 KYKISEDVSSLLQSSKVIGRSATKLEKRRRAMQLSKAGVETEHSDESVEQNDND--DDSC 144
Query: 151 GSPDISPWHQLSAKVDEVLPFVSKREVSCGLDSCQDLDNGTIVSNQGEVLSSLPNEDENI 210
+P H E FV+ DS Q L + ++ + E S L D+ +
Sbjct: 145 MDEPTTPEH----VEIETPTFVT--------DSEQQLVHADLMISAEESSSKL-EVDDTV 204
Query: 211 CTLALEDGRDLSSAMCPDGGFKGPEIPDKKNVIPNVETCKTYDPLPKLRLLSRPIVVPVL 270
+ L RD DG + ++ + +P VV V
Sbjct: 205 DMIPLTTCRD-DDEDSMDGLIENEDVTVQGPRVP-------------------AFVVHVS 264
Query: 271 RPPEVEDRRKDLPIVMMEQEIMEAINENPIVIICGETGCGKTTQVPQFLYEAGFGSLQSG 330
RP EVE+ RKDLPIVMMEQEIMEAIN +P VII G+TGCGKTTQVPQFLYEAGFGS Q
Sbjct: 265 RPAEVEETRKDLPIVMMEQEIMEAINRHPAVIISGQTGCGKTTQVPQFLYEAGFGSKQFS 324
Query: 331 HQRGTIGVTQPRRVAVLATAKRVAYELNVHLGKEVGFQVRYDKKIGDSSSIKFMTDGILL 390
+ G IG+TQPRRVAVLATAKRVA+EL V LGKEVGFQVRYDKKIG++SSIKFMTDGILL
Sbjct: 325 SRSGIIGITQPRRVAVLATAKRVAFELGVRLGKEVGFQVRYDKKIGENSSIKFMTDGILL 384
Query: 391 REVQHDFLLKRYSVLILDEAHERSMNTDILIGMLSRVVKLRQDLHMKQQQMMLSGDNISP 450
RE+Q+DFLL+RYSV+ILDEAHERS+NTDILIGML+RV+K+RQ+ + +QQ+ + SG ++
Sbjct: 385 REIQNDFLLRRYSVIILDEAHERSLNTDILIGMLTRVIKIRQEYYEEQQKSLQSGGTVTS 444
Query: 451 ENMIFPLKLVLMSATLRVEDFISGGRLFHVSPPIIEVPTRQYPVTVHFSRRTDTVDYIGQ 510
E I PLKL+LMSATLRVEDF+SG RLF PP+IEVPTRQYPVT+HFS++T+ VDYIG+
Sbjct: 445 ECQITPLKLILMSATLRVEDFVSGKRLFPNIPPLIEVPTRQYPVTIHFSKKTEIVDYIGE 504
Query: 511 AYKKVLAIHKKLPPGGILVFVTGQREVENLCKKLREASKKLIMKTSKKNVGNNNDNVEMN 570
AYKKV++IHKKLP GGILVFVTGQREV+ LC+KLR++SK+L+++ +K++ +
Sbjct: 505 AYKKVMSIHKKLPQGGILVFVTGQREVDYLCEKLRKSSKELVVQAAKRD-AYVKKKCDDG 564
Query: 571 SIQNLDMKEINEAFEDNEISTGEQTDRFSSYDKDDFDINDDLSDASYNSETDSELEFDED 630
S +DMKEI EAF+D+ + Q RFSS+ +D DI D D + E E + D D
Sbjct: 565 SFGGVDMKEIAEAFDDD---SNNQNSRFSSHGEDPSDIGDGNYDDDFEEEDMYESDEDRD 624
Query: 631 DLMLDENDGNLTDVLREDVNLASLKAAFDALDGKTAFDFDKIPSEQSKEEKSSAKQCGSV 690
+D DG + + E+ L +L+AAF+AL K + +E +K + ++ V
Sbjct: 625 WETVD--DGFASSFV-EEGKLDALRAAFNALADKNG----SVSAEPAKSIAAENQEAEQV 684
Query: 691 RMKEKGELDFSVGALHVLPLYAMLPATSQLRVFEEVKEGERLVVVATNVAETSLTIPGIK 750
+ K FS G L VLPLYAML +QLRVFEEV++ ERLVVVATNVAETSLTIPGIK
Sbjct: 685 KNK------FSPGKLRVLPLYAMLSPAAQLRVFEEVEKEERLVVVATNVAETSLTIPGIK 744
Query: 751 YVVDTGREKVKTYNSSNGIENYEVQWISKASAAQRAGRAGRTGPGHCYRLYSSAVFSNIF 810
YVVDTGR KVK Y+S G+E+YEV WIS+ASA+QRAGRAGRTGPGHCYRLYSSAVFSNIF
Sbjct: 745 YVVDTGRVKVKNYDSKTGMESYEVDWISQASASQRAGRAGRTGPGHCYRLYSSAVFSNIF 804
Query: 811 PDFSLAEIAKVPVDGVVLLMKSMGISKVVNFPFPTPPETSAVLEAESCLKALEALDSDGR 870
+ SL EI KVPVDGV+LLMKSM I KV NFPFPTPPE SA+ EAE CLKALEALDS+G
Sbjct: 805 EESSLPEIMKVPVDGVILLMKSMNIPKVENFPFPTPPEPSAIREAERCLKALEALDSNGG 864
Query: 871 LTPLGKAMARYPLSPRHSRMLLTVIQIMKTLKNYERANLVLAYSVAAAAALSMSNPFAIM 930
LTPLGKAM+ YP+SPRHSRMLLTVIQ++K +NY RANL+L Y+VAA AALS+ NP +
Sbjct: 865 LTPLGKAMSHYPMSPRHSRMLLTVIQMLKETRNYSRANLILGYAVAAVAALSLPNPLIME 924
Query: 931 FEGSQMKDDLEQNDRSSERADTKAEEKVEKSLKKKLKEAGKLSREKFSNPSCDALTIAYA 990
FEG + + S+ AD K ++ +K KK KE K +R++FSNPS DALT+AYA
Sbjct: 925 FEGEKKNE--------SKDAD-KTVKQEDKQRKKDRKEKIKAARDRFSNPSSDALTVAYA 984
Query: 991 LQCFELSGSPAEFCNNYTLHLKTMQEMSKLRKQLLQLVFNHNGSSSAEFDFSWTSGTLEH 1050
L FE+S + FC LHLKTM EMSKL+ QLL+LVFN S E FSWT GT++
Sbjct: 985 LHSFEVSENGMGFCEANGLHLKTMDEMSKLKDQLLRLVFNCCKPSETEDSFSWTHGTIQD 1044
Query: 1051 VEDAWRI---PSNKHPLSLNEEGIIGQAICAGWPDRVAKRIREISKSADGDRRERTGKYQ 1110
VE +WRI S+K PL NEE ++G+AICAGW DRVA R+ R +YQ
Sbjct: 1045 VEKSWRITTSTSSKTPLLQNEEELLGEAICAGWADRVA-------------RKTRATEYQ 1104
Query: 1111 ACMVKEAVFLHRRSSVSRSAPEFVVYNELLHTKRPYMHGLTSVKPDWLVKYASSLCAFSA 1170
AC V+E VFLHR SS+ SAPE +VY+ELL T RPYMHG T V+P+WLVK+A SLC FSA
Sbjct: 1105 ACAVQEPVFLHRWSSLINSAPELLVYSELLLTNRPYMHGATRVRPEWLVKHAKSLCVFSA 1164
Query: 1171 PLTDPRPYYEPRNDTVFAWVAPAFGPHLWKLPLHNVPIKDDVHGVGVFGCALLEGNVLPC 1230
PL DP+PYY D V WV P+FGPH W+LP H+V I +D FGCALL+G VL C
Sbjct: 1165 PLKDPKPYYSSEEDRVLCWVVPSFGPHNWELPAHSVAITEDRDRAAAFGCALLQGEVLTC 1224
Query: 1231 LKSVRKFMAAPPSSILRPEALGQKRVGNLLSRLKSKKIKSCATLREAWNDNPYELHSEIL 1290
LKS R +A P ++L EA G +RVG+L+ L KKI + +LR+ W NP L+SEI
Sbjct: 1225 LKSFRALLAGKPETLLEREAWGLERVGSLVMVLTEKKIDTLESLRKNWEQNPNVLYSEIE 1231
Query: 1291 DWFQESYHSHFEELWSKMLCE 1304
WFQ+ + ++LW ML E
Sbjct: 1285 VWFQKKFRHRVKDLWQTMLKE 1231
BLAST of Sed0026170 vs. TAIR 10
Match:
AT3G26560.1 (ATP-dependent RNA helicase, putative )
HSP 1 Score: 342.4 bits (877), Expect = 1.6e-93
Identity = 259/898 (28.84%), Postives = 399/898 (44.43%), Query Frame = 0
Query: 270 VEDRRKDLPIVMMEQEIMEAINENPIVIICGETGCGKTTQVPQFLYEAGFGSLQSGHQRG 329
++++R+ LPI +++E+++A+++N ++++ GETG GKTTQV Q+L EAG+ + +G
Sbjct: 508 IQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTT------KG 567
Query: 330 TIGVTQPRRVAVLATAKRVAYELNVHLGKEVGFQVRYDKKIGDSSSIKFMTDGILLREVQ 389
IG TQPRRVA ++ AKRVA E LG+EVG+ +R++ G + IK+MTDG+LLRE+
Sbjct: 568 KIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL 627
Query: 390 HDFLLKRYSVLILDEAHERSMNTDILIGMLSRVVKLRQDLHMKQQQMMLSGDNISPENMI 449
D L +YSV++LDEAHER+++TD+L G+L +++K R D
Sbjct: 628 IDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLD--------------------- 687
Query: 450 FPLKLVLMSATLRVEDFISGGRLFHVSPPIIEVPTRQYPVTVHFSRRTDTVDYIGQAYKK 509
L+L++ SATL E F G F+ + I +P R +PV + ++++ +T DY+ A
Sbjct: 688 --LRLIVTSATLDAEKF--SGYFFNCN--IFTIPGRTFPVEILYTKQPET-DYLDAALIT 747
Query: 510 VLAIHKKLPPGGILVFVTGQREVENLCKKLREASKKLIMKTSKKNVGNNNDNVEMNSIQN 569
VL IH P G ILVF+TGQ E+++ C+ L E
Sbjct: 748 VLQIHLTEPEGDILVFLTGQEEIDSACQSLYE---------------------------- 807
Query: 570 LDMKEINEAFEDNEISTGEQTDRFSSYDKDDFDINDDLSDASYNSETDSELEFDEDDLML 629
Sbjct: 808 ------------------------------------------------------------ 867
Query: 630 DENDGNLTDVLREDVNLASLKAAFDALDGKTAFDFDKIPSEQSKEEKSSAKQCGSVRMKE 689
RMK
Sbjct: 868 --------------------------------------------------------RMKG 927
Query: 690 KGELDFSVGALHVLPLYAMLPATSQLRVFEEVKEGERLVVVATNVAETSLTIPGIKYVVD 749
G+ +V L +LP+Y+ LP+ Q R+F+ G+R VVVATN+AE SLTI GI YVVD
Sbjct: 928 LGK---NVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVD 987
Query: 750 TGREKVKTYNSSNGIENYEVQWISKASAAQRAGRAGRTGPGHCYRLYSSAVFSNIFPDFS 809
G K YN G+E+ + IS+ASA QRAGRAGRTGPG CYRLY+ + + N P S
Sbjct: 988 PGFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTS 1047
Query: 810 LAEIAKVPVDGVVLLMKSMGISKVVNFPFPTPPETSAVLEAESCLKALEALDSDGRLTPL 869
+ EI ++ + L MK+MGI+ +++F F PP+ A++ A L +L ALD +G LT L
Sbjct: 1048 IPEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSLGALDEEGLLTKL 1107
Query: 870 GKAMARYPLSPRHSRMLLTVIQIMKTLKNYERANLVLAYSVAAAAALSMSNPFAIMFEGS 929
G+ MA +PL P S+MLL A+ L S+ M
Sbjct: 1108 GRKMAEFPLEPPLSKMLL------------------------ASVDLGCSDEILTMIAMI 1136
Query: 930 QMKDDLEQNDRSSERADTKAEEKVEKSLKKKLKEAGKLSREKFSNPSCDALTIAYALQCF 989
Q + + +AD K R KF P D LT+ + +
Sbjct: 1168 QTGNIFYRPREKQAQADQK--------------------RAKFFQPEGDHLTLLAVYEAW 1136
Query: 990 ELSGSPAEFCNNYTLHLKTMQEMSKLRKQLLQLVFNHNGSSSAEFDFSWTSGTLEHVEDA 1049
+ +C + ++++ +RKQLL ++
Sbjct: 1228 KAKNFSGPWCFENFIQSRSLRRAQDVRKQLLSIM-------------------------- 1136
Query: 1050 WRIPSNKHPLSLNEEG----IIGQAICAGWPDRVAKRIREISKSADGDRRERTGKYQACM 1109
+K+ L + G I +AI AG+ G R++ Y+ +
Sbjct: 1288 -----DKYKLDVVTAGKNFTKIRKAITAGF-------------FFHGARKDPQEGYRTLV 1136
Query: 1110 VKEAVFLHRRSSVSRSAPEFVVYNELLHTKRPYMHGLTSVKPDWLVKYASSLCAFSAP 1164
+ V++H S++ + P++V+Y++L+ T + YM +T + P WLV+ A S P
Sbjct: 1348 ENQPVYIHPSSALFQRQPDWVIYHDLVMTTKEYMREVTVIDPKWLVELAPRFFKVSDP 1136
BLAST of Sed0026170 vs. TAIR 10
Match:
AT5G13010.1 (RNA helicase family protein )
HSP 1 Score: 327.0 bits (837), Expect = 6.9e-89
Identity = 253/883 (28.65%), Postives = 388/883 (43.94%), Query Frame = 0
Query: 272 DRRKDLPIVMMEQEIMEAINENPIVIICGETGCGKTTQVPQFLYEAGFGSLQSGHQRGTI 331
++R+ LPI + E+++ I EN ++++ GETG GKTTQ+ Q+L+E G+ G +
Sbjct: 553 EQRQYLPIFSVRDELLQVIRENQVIVVVGETGSGKTTQLTQYLHEDGYTI------NGIV 612
Query: 332 GVTQPRRVAVLATAKRVAYELNVHLGKEVGFQVRYDKKIGDSSSIKFMTDGILLREVQHD 391
G TQPRRVA ++ AKRV+ E+ LG ++G+ +R++ G ++ IK+MTDG+LLRE D
Sbjct: 613 GCTQPRRVAAMSVAKRVSEEMETELGDKIGYAIRFEDVTGPNTVIKYMTDGVLLRETLKD 672
Query: 392 FLLKRYSVLILDEAHERSMNTDILIGMLSRVVKLRQDLHMKQQQMMLSGDNISPENMIFP 451
L +Y V+++DEAHERS+NTD+L G+L +VV R+D
Sbjct: 673 SDLDKYRVVVMDEAHERSLNTDVLFGILKKVVARRRD----------------------- 732
Query: 452 LKLVLMSATLRVEDFISGGRLFHVSPPIIEVPTRQYPVTVHFSRRTDTVDYIGQAYKKVL 511
KL++ SATL + F + F S PI +P R +PV + +S +T DY+ A K+ +
Sbjct: 733 FKLIVTSATLNAQKFSN----FFGSVPIFNIPGRTFPVNILYS-KTPCEDYVEAAVKQAM 792
Query: 512 AIHKKLPPGGILVFVTGQREVENLCKKLREASKKLIMKTSKKNVGNNNDNVEMNSIQNLD 571
IH PPG IL+F+TGQ E+E C L+E ++L+ +S
Sbjct: 793 TIHITSPPGDILIFMTGQDEIEAACFSLKERMEQLVSSSS-------------------- 852
Query: 572 MKEINEAFEDNEISTGEQTDRFSSYDKDDFDINDDLSDASYNSETDSELEFDEDDLMLDE 631
Sbjct: 853 ------------------------------------------------------------ 912
Query: 632 NDGNLTDVLREDVNLASLKAAFDALDGKTAFDFDKIPSEQSKEEKSSAKQCGSVRMKEKG 691
RE NL
Sbjct: 913 ---------REITNLL-------------------------------------------- 972
Query: 692 ELDFSVGALHVLPLYAMLPATSQLRVFEEVKEGERLVVVATNVAETSLTIPGIKYVVDTG 751
+LP+Y+ LPA Q ++F++ ++G R +VATN+AETSLT+ GI YV+DTG
Sbjct: 973 ----------ILPIYSQLPADLQAKIFQKPEDGARKCIVATNIAETSLTVDGIYYVIDTG 1032
Query: 752 REKVKTYNSSNGIENYEVQWISKASAAQRAGRAGRTGPGHCYRLYSSAVFSNIFPDFSLA 811
K+K +N G++ +V IS+A++ QRAGRAGRTGPG CYRLY+ + + N +
Sbjct: 1033 YGKMKVFNPRMGMDALQVFPISRAASDQRAGRAGRTGPGTCYRLYTESAYLNEMLPSPVP 1092
Query: 812 EIAKVPVDGVVLLMKSMGISKVVNFPFPTPPETSAVLEAESCLKALEALDSDGRLTPLGK 871
EI + + VVLL+KS+ I +++F F PP +L + L L AL++ G LT LG
Sbjct: 1093 EIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWVLGALNNVGGLTDLGW 1152
Query: 872 AMARYPLSPRHSRMLLTVIQIMKTLKNYERANLVLAYSVAAAAALSMSNPFAIMFEGSQM 931
M +PL P ++MLL ER + + +SM + ++ F
Sbjct: 1153 KMVEFPLDPPLAKMLLM----------GERLDCI----DEVLTIVSMLSVPSVFF----- 1174
Query: 932 KDDLEQNDRSSERADTKAEEKVEKSLKKKLKEAGKLSREKFSNPSCDALTIAYALQCFEL 991
R ERA E +REKF P D LT+ Q ++
Sbjct: 1213 --------RPKERA-----------------EESDAAREKFFVPESDHLTLLNVYQQWKE 1174
Query: 992 SGSPAEFCNNYTLHLKTMQEMSKLRKQLLQLVFNHNGSSSAEFDFSWTSGTLEHVEDAWR 1051
++CN++ L +K +++ ++R QLL ++ L W
Sbjct: 1273 HDYRGDWCNDHYLQVKGLRKAREVRSQLLDIL-------------KQLKIELRSCGPDW- 1174
Query: 1052 IPSNKHPLSLNEEGIIGQAICAGWPDRVAKRIREISKSADGDRRERTGKYQACMVKEAVF 1111
I+ +AIC+ + A R + G+Y C
Sbjct: 1333 -------------DIVRKAICSAYFHNSA-------------RLKGVGEYVNCRTGMPCH 1174
Query: 1112 LHRRSSV--SRSAPEFVVYNELLHTKRPYMHGLTSVKPDWLVK 1153
LH S++ P++VVY+EL+ T + YM TSV+P WL +
Sbjct: 1393 LHPSSALYGLGYTPDYVVYHELILTTKEYMQCATSVEPHWLAE 1174
BLAST of Sed0026170 vs. TAIR 10
Match:
AT3G62310.1 (RNA helicase family protein )
HSP 1 Score: 325.1 bits (832), Expect = 2.6e-88
Identity = 253/897 (28.21%), Postives = 390/897 (43.48%), Query Frame = 0
Query: 269 EVEDRRKDLPIVMMEQEIMEAINENPIVIICGETGCGKTTQVPQFLYEAGFGSLQSGHQR 328
++ ++R+ LP+ + ++E ++ +N N +I+ GETG GKTTQ+PQF+ +A ++
Sbjct: 53 DILEKRRTLPVWLQKEEFLKTLNNNQTLILVGETGSGKTTQIPQFVIDAVDAETSDKRRK 112
Query: 329 GTIGVTQPRRVAVLATAKRVAYELNVHLGKEVGFQVRYDKKIGDSSSIKFMTDGILLREV 388
+G TQPRRVA ++ ++RVA E++V +G+EVG+ +R++ + +K++TDG+LLRE
Sbjct: 113 WLVGCTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSPRTVLKYLTDGMLLREA 172
Query: 389 QHDFLLKRYSVLILDEAHERSMNTDILIGMLSRVVKLRQDLHMKQQQMMLSGDNISPENM 448
D LL+RY V+ILDEAHER++ TD+L G+L V+K R D
Sbjct: 173 MADPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPD-------------------- 232
Query: 449 IFPLKLVLMSATLRVE---DFISGGRLFHVSPPIIEVPTRQYPVTVHFSRRTDTVDYIGQ 508
LKLV+MSATL E D+ SG P+++VP R +PV + +++ + DY+
Sbjct: 233 ---LKLVVMSATLEAEKFQDYFSGA-------PLMKVPGRLHPVEIFYTQEPER-DYLEA 292
Query: 509 AYKKVLAIHKKLPPGGILVFVTGQREVENLCKKLREASKKLIMKTSKKNVGNNNDNVEMN 568
A + V+ IH PPG ILVF+TG+ E+E+ C+K+
Sbjct: 293 AIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKIN------------------------- 352
Query: 569 SIQNLDMKEINEAFEDNEISTGEQTDRFSSYDKDDFDINDDLSDASYNSETDSELEFDED 628
Sbjct: 353 ------------------------------------------------------------ 412
Query: 629 DLMLDENDGNLTDVLREDVNLASLKAAFDALDGKTAFDFDKIPSEQSKEEKSSAKQCGSV 688
Sbjct: 413 ------------------------------------------------------------ 472
Query: 689 RMKEKGELDFSVGALHVLPLYAMLPATSQLRVF----EEVKEG---ERLVVVATNVAETS 748
KE G L VG + V+PLY+ LP Q ++F E V EG R +VV+TN+AETS
Sbjct: 473 --KEVGNLGDQVGPIKVVPLYSTLPPAMQQKIFDPAPEPVTEGGPPGRKIVVSTNIAETS 532
Query: 749 LTIPGIKYVVDTGREKVKTYNSSNGIENYEVQWISKASAAQRAGRAGRTGPGHCYRLYSS 808
LTI GI YV+D G K K YN +E+ V ISKASA QR+GRAGRT PG C+RLY+
Sbjct: 533 LTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTE 592
Query: 809 AVFSNIFPDFSLAEIAKVPVDGVVLLMKSMGISKVVNFPFPTPPETSAVLEAESCLKALE 868
F+N + EI + + VL +K +GI +V+F F PP ++ A L L
Sbjct: 593 KSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLG 652
Query: 869 ALDSDGRLTPLGKAMARYPLSPRHSRMLLTVIQIMKTLKNYERANLVLAYSVAAAAALSM 928
ALD DG LT G+ M+ +PL P+ ++ML+ + +N +L+ S A LS+
Sbjct: 653 ALDDDGNLTKTGEIMSEFPLDPQMAKMLI-------VSPEFNCSNEILSVS----AMLSV 690
Query: 929 SNPFAIMFEGSQMKDDLEQNDRSSERADTKAEEKVEKSLKKKLKEAGKLSREKFSNPSCD 988
N F E + D+ ++ +F + D
Sbjct: 713 PNCFIRPREAQKAADE---------------------------------AKARFGHIEGD 690
Query: 989 ALTIAYALQCFELSGSPAEFCNNYTLHLKTMQEMSKLRKQLLQLVFNHNGSSSAEFDFSW 1048
LT+ F+ + +C ++ + M+ +R+QL++++ N DF
Sbjct: 773 HLTLLNVYHAFKQNNEDPNWCYENFINNRAMKSADNVRQQLVRIMSRFN-LKMCSTDF-- 690
Query: 1049 TSGTLEHVEDAWRIPSNKHPLSLNEEGIIGQAICAGWPDRVAKRIREISKSADGDRRERT 1108
N +N I +A+ AG+ +VA ERT
Sbjct: 833 ----------------NSRDYYIN----IRKAMLAGYFMQVA-------------HLERT 690
Query: 1109 GKYQACMVKEAVFLHRRSSVSRSAPEFVVYNELLHTKRPYMHGLTSVKPDWLVKYAS 1156
G Y + V LH + + PE+V+YNE + T R ++ +T ++ +WLV AS
Sbjct: 893 GHYLTVKDNQVVHLHPSNCLDHK-PEWVIYNEYVLTSRNFIRTVTDIRGEWLVDVAS 690
BLAST of Sed0026170 vs. TAIR 10
Match:
AT1G32490.1 (RNA helicase family protein )
HSP 1 Score: 323.2 bits (827), Expect = 1.0e-87
Identity = 256/887 (28.86%), Postives = 395/887 (44.53%), Query Frame = 0
Query: 269 EVEDRRKDLPIVMMEQEIMEAINENPIVIICGETGCGKTTQVPQFLYEAGFGSLQSGHQR 328
E+++ R+ LPI ++++A+ E+ +++I G+TG GKTTQ+PQ+L+EAG+ +R
Sbjct: 396 ELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHEAGY------TKR 455
Query: 329 GTIGVTQPRRVAVLATAKRVAYELNVHLGKEVGFQVRYDKKIGDSSSIKFMTDGILLREV 388
G +G TQPRRVA ++ A RVA E+ V LG EVG+ +R++ D + +K+MTDG+LLRE+
Sbjct: 456 GKVGCTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREL 515
Query: 389 QHDFLLKRYSVLILDEAHERSMNTDILIGMLSRVVKLRQDLHMKQQQMMLSGDNISPENM 448
+ L YSV+I+DEAHER+++TDIL G++ + + R D
Sbjct: 516 LGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPD-------------------- 575
Query: 449 IFPLKLVLMSATLRVEDFISGGRLFHVSPPIIEVPTRQYPVTVHFSRRTDTVDYIGQAYK 508
LKL++ SAT+ E F + + PI P R+YPV ++++ + DY+ A
Sbjct: 576 ---LKLLISSATMDAEKFSD----YFDTAPIFSFPGRRYPVEINYTSAPE-ADYMDAAIV 635
Query: 509 KVLAIHKKLPPGGILVFVTGQREVENLCKKLREASKKLIMKTSKKNVGNNNDNVEMNSIQ 568
+L IH + P G ILVF TGQ E+E + + + I+
Sbjct: 636 TILTIHVREPLGDILVFFTGQEEIETA------------------------EEILKHRIR 695
Query: 569 NLDMKEINEAFEDNEISTGEQTDRFSSYDKDDFDINDDLSDASYNSETDSELEFDEDDLM 628
L K
Sbjct: 696 GLGTK------------------------------------------------------- 755
Query: 629 LDENDGNLTDVLREDVNLASLKAAFDALDGKTAFDFDKIPSEQSKEEKSSAKQCGSVRMK 688
+RE
Sbjct: 756 -----------IRE---------------------------------------------- 815
Query: 689 EKGELDFSVGALHVLPLYAMLPATSQLRVFEEVKEGERLVVVATNVAETSLTIPGIKYVV 748
L + P+YA LP+ Q ++FE EG R VV+ATN+AETSLTI GIKYVV
Sbjct: 816 -----------LIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVV 875
Query: 749 DTGREKVKTYNSSNGIENYEVQWISKASAAQRAGRAGRTGPGHCYRLYSSAVFSNIFPDF 808
D G K+K+YN G+E+ + ISKASA QRAGRAGRT PG CYRLY++ ++N +
Sbjct: 876 DPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCYRLYTAFNYNNDLEEN 935
Query: 809 SLAEIAKVPVDGVVLLMKSMGISKVVNFPFPTPPETSAVLEAESCLKALEALDSDGRLTP 868
++ E+ + + VVL +KS+GI ++NF F PP A++++ L AL AL+ G LT
Sbjct: 936 TVPEVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALVKSLELLFALGALNKLGELTK 995
Query: 869 LGKAMARYPLSPRHSRMLLTVIQIMKTLKNYERANLVLAYSVAAAAALSMSNPFAIMFEG 928
G+ MA +PL P S+M++ Y+ ++ + ++ AA LS+ +
Sbjct: 996 AGRRMAEFPLDPMLSKMIV-------VSDKYKCSDEI----ISIAAMLSIGGSIFYRPKD 1018
Query: 929 SQM-KDDLEQNDRSSERADTKAEEKVEKSLKKKLKEAGKLSREKFSNPSCDALTIAYALQ 988
Q+ D+ N + D A KV S K+
Sbjct: 1056 KQVHADNARMNFHTGNVGDHIALLKVYSSWKE---------------------------- 1018
Query: 989 CFELSGSPAEFCNNYTLHLKTMQEMSKLRKQLLQLVFNHNGSSSAEFDFSWTSGTLEHVE 1048
+ ++C + +++M+ +R QL G LE VE
Sbjct: 1116 ----TNFSTQWCYENYIQVRSMKRARDIRDQL--------------------EGLLERVE 1018
Query: 1049 DAWRIPSNKHPLSLNEEGIIGQAICAGWPDRVAKRIREISKSADGDRRERTGKYQACMVK 1108
I SN LNE + ++I AG+ AK ++ G Y+
Sbjct: 1176 --IDISSN-----LNELDSVRKSIVAGFFPHTAK-------------LQKNGSYRTVKHP 1018
Query: 1109 EAVFLHRRSSVSRSAPEFVVYNELLHTKRPYMHGLTSVKPDWLVKYA 1155
+ V +H S +S+ P +VVY+EL+ T + YM +T +KP+WL++ A
Sbjct: 1236 QTVHIHPNSGLSQVLPRWVVYHELVLTSKEYMRQVTELKPEWLIELA 1018
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_023548152.1 | 0.0e+00 | 86.23 | ATP-dependent RNA helicase DEAH13 isoform X1 [Cucurbita pepo subsp. pepo] | [more] |
XP_022953700.1 | 0.0e+00 | 85.93 | ATP-dependent RNA helicase DEAH13 [Cucurbita moschata] | [more] |
XP_022991216.1 | 0.0e+00 | 85.78 | ATP-dependent RNA helicase DEAH13 [Cucurbita maxima] | [more] |
KAG7014343.1 | 0.0e+00 | 86.45 | ATP-dependent RNA helicase DEAH13 [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
KAG6575802.1 | 0.0e+00 | 86.22 | ATP-dependent RNA helicase DEAH13, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
Q9C813 | 0.0e+00 | 54.25 | ATP-dependent RNA helicase DEAH13 OS=Arabidopsis thaliana OX=3702 GN=FAS4 PE=2 S... | [more] |
Q8IY37 | 2.8e-159 | 36.53 | Probable ATP-dependent RNA helicase DHX37 OS=Homo sapiens OX=9606 GN=DHX37 PE=1 ... | [more] |
O46072 | 4.0e-150 | 34.83 | Probable ATP-dependent RNA helicase kurz OS=Drosophila melanogaster OX=7227 GN=k... | [more] |
P34305 | 5.3e-142 | 34.34 | Putative ATP-dependent RNA helicase rha-2 OS=Caenorhabditis elegans OX=6239 GN=r... | [more] |
Q04217 | 5.8e-141 | 40.77 | Probable ATP-dependent RNA helicase DHR1 OS=Saccharomyces cerevisiae (strain ATC... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1GQE0 | 0.0e+00 | 85.93 | ATP-dependent RNA helicase DEAH13 OS=Cucurbita moschata OX=3662 GN=LOC111456150 ... | [more] |
A0A6J1JQ48 | 0.0e+00 | 85.78 | ATP-dependent RNA helicase DEAH13 OS=Cucurbita maxima OX=3661 GN=LOC111487937 PE... | [more] |
A0A1S3BRN5 | 0.0e+00 | 82.48 | ATP-dependent RNA helicase DEAH13 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10349... | [more] |
A0A0A0K680 | 0.0e+00 | 81.87 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G405840 PE=4 SV=1 | [more] |
A0A1S3BSH7 | 0.0e+00 | 81.80 | ATP-dependent RNA helicase DEAH13 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10349... | [more] |