Sed0026166 (gene) Chayote v1

Overview


Name	Sed0026166
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Retrotrans_gag domain-containing protein
Location	LG09: 31355516 .. 31358043 (-)
RNA-Seq Expression	Sed0026166
Synteny	Sed0026166

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCGGGAGTGTCTCAACGAATTTTTCAGACATAATGACAATTGGTGAGAGGACTAAATATGGAGTAAAGCATGGAAAAATAGCTGATGCAGTTGGGTCATCGACGATAAAAAAAACACCTACAAAGAAAAAAGAGGAAGAGGTGCACATGGTGGGAGGAACAAACCAGTTCAATTCTCGCAACAGCTATACCCCAAGCCTGGAATAGCTTAGTATCCTACAAATTACTATTCACACCATTCACCTTATGTCAATAATACGTTGGTGCAATTCACTTCTCCATTCTCGCAAAACCCACATCCTGTGTTGAATCATTGTTATCAACCTAGAACTCAACAAACCTCCCACTAGTTTCAAAGGCGACAAAATTATAAAGAGGAGTATAAAAATGCCCAATTTGATTCGATTCCGATTAGTTCCACTGAGCTTTTACCTTAGTTATTTCCCAATAGTGTGTTAACACCACTACCCATAGACCCTCTACAACCACCATATCCGAAGCGGTATGATCCAAATGCTCGTTGCGATTATCATGCAGGGGTAAGTGGACAATATAAATTGTGTTACTTTAATGTATAGGGTACAAGGATTAATAAAAGCAGGGTGGCTAAATTTTAGTAAATATAATGGACCTGATGTCAAGAAAAATCCTCTTCCAAACCACCAAAATCGTCAAATCAATGCAATCGATGTTCAAGATATCACTTCAAGAAAAGATGTTGCATGTATGCTGACATCCAAGGAGGAGCTTTTTGAAATCTTGTTTAATCATGGATATATTGAAATGGAACCTTTTCAATTTGATTTAGTTATGAATGGTTATAATGACGATTTAACTTGCTCATACCATGCTGAGGCAAAAGGCAATTCTATTGACCACTGTTTGTGCTTAAAAATCCATGATTCGTTGGATTCACGCTTTTTGGCAGTCTCTCAAAAGATGAACGAATATCCTCAAGAGGAAGTTCAAATTGATGCGGTGGAAGAGCTTTCTCGTAGAAAAACCACAGAAGTTTCTCTAAACCAGAAACCTTTAACATTTTTTTGTCGTGAAAGACCCAATACTTGAAGCTCAAATCGGAAGCCAATTACTATACAGGTTCCAACTTCTTTCAAATATAATAGTAATAGAGCGGTACCATGGAGTTATGAGTATAAGGTAACAGTAGGCTCTAAACCACTTCAAGTTGATAATATTAGTTGAATAGGAAGTTTTACACGAAGTGTGAGATGTTACACTCCAGATGAACTCTTGAAATCCAAAACAAGAGAAGAAGGAAAAACAAAGATCGAAAAAAATGTTAATGATCAAATAAAGAAGCCTGCTGCCTCAAACATTTTGGAGGACAAAGAACCAGCTTCTAAAGAAGATATTGAAGAATTTTTAAAACTGGTCAAACAAAGTGAGTATAAAGTGGTTGAGCAGCTAGGTCGAACACCTGCAAAGATATCAATTTTGGGATTATTGTTAGCTTCTAAAGCACATTTTAAGACTTTGTTGGAAACATTGAATCAAATTTATGTTCCTCAAGATATTACAGTTAACAATCTAGACACGGTCGTTGGAAACATAAGTGCTTCCAACTCGATAACTTTCACGAATGAGAAGATACCATCAGATGGTATATGTCATACTAAAGCTCTTCATATCACAGTTAAGTACAAGCAGTTTGCTATTGCAAGGGTTCTGGTTGACAATGGCTCCTTTTTTAACATAATGCCTAAATCTACATTGGAAAAATTACCTATCGATATGTCTTACATTAGACCTAGTACCATGATAGTAAGAGCTTTTGACAGAGCACGTAGTTAAGTCATTGAAGATATAGACATCCCTATTTAGATAGGTCATGTACTTTTTGTATAACCTTTCAAGTTATGAATATCAATTTGGGCTATGGTTTTCGATTGGGGCGTCCGTGGATCCACTCAACTAGGGTAGTCTCATCATCCGTACACCAAAAAATCAAGTTCGTGGTCGACCGTAAACCTGTTCATTGTATCGGTCGGAAGGATACTTTAGTCTCAAGGCCTTCCTCGATGCCAAATGTAGAAGCAGCTGAAGAAACTTTTGAATCATCATTTCAAGCTTTTGAGATAACATATGCCACAAATATATATGTAGACATTGAAAGGAAAAAGAAAGCTATGAGGCCTTATTTAAATGAAAGTACCAAAAGCCTAGCTGACTTATTGAATACGATAGGAAACATGATGAGGTTTGGTCTAGGATATAAACCAAATAAAATAGATATGGTTAGAGTTCACAAACAGCAAAAAAAGAAGTGACTGGCAAGACTAGGACATCACGAGTTTAAACGTTGAATGGGTAGTATTCCCCATCTTCATAATTCTTTCAAGTTTGGTGGTGTAGTCCATCTAGGAGATCAAAGCCCAACAGTTATGGTCGTGGTTAAAGATAAAGAAGAAGCAGATCCTTTGGTCTACTTATGCCCAGATAATTTTGAGCTTAACAACTGGACCATGATGGAACTTCCAACTATTATAAATGAAATTTCAAAGTAA

mRNA sequence

ATGATCGGGAGTGTCTCAACGAATTTTTCAGACATAATGACAATTGGTGAGAGGACTAAATATGGAGTAAAGCATGGAAAAATAGCTGATGCAGTTGGGTCATCGACGATAAAAAAAACACCTACAAAGAAAAAAGAGGAAGAGGTAAAAGATGTTGCATGTATGCTGACATCCAAGGAGGAGCTTTTTGAAATCTTGTTTAATCATGGATATATTGAAATGGAACCTTTTCAATTTGATTTAGTTATGAATGGTTATAATGACGATTTAACTTGCTCATACCATGCTGAGGCAAAAGGCAATTCTATTGACCACTGTTTGTGCTTAAAAATCCATGATTCGTTGGATTCACGCTTTTTGGCAGTCTCTCAAAAGATGAACGAATATCCTCAAGAGGAAGTTCAAATTGATGCGGTGGAAGAGCTTTCTCGAAACATGATGAGGTTTGGTCTAGGATATAAACCAAATAAAATAGATATGGTTAGAGTTCACAAACAGCAAAAAAAGAATATTCCCCATCTTCATAATTCTTTCAAGTTTGGTGGTGTAGTCCATCTAGGAGATCAAAGCCCAACAGTTATGGTCGTGGTTAAAGATAAAGAAGAAGCAGATCCTTTGGTCTACTTATGCCCAGATAATTTTGAGCTTAACAACTGGACCATGATGGAACTTCCAACTATTATAAATGAAATTTCAAAGTAA

Coding sequence (CDS)

ATGATCGGGAGTGTCTCAACGAATTTTTCAGACATAATGACAATTGGTGAGAGGACTAAATATGGAGTAAAGCATGGAAAAATAGCTGATGCAGTTGGGTCATCGACGATAAAAAAAACACCTACAAAGAAAAAAGAGGAAGAGGTAAAAGATGTTGCATGTATGCTGACATCCAAGGAGGAGCTTTTTGAAATCTTGTTTAATCATGGATATATTGAAATGGAACCTTTTCAATTTGATTTAGTTATGAATGGTTATAATGACGATTTAACTTGCTCATACCATGCTGAGGCAAAAGGCAATTCTATTGACCACTGTTTGTGCTTAAAAATCCATGATTCGTTGGATTCACGCTTTTTGGCAGTCTCTCAAAAGATGAACGAATATCCTCAAGAGGAAGTTCAAATTGATGCGGTGGAAGAGCTTTCTCGAAACATGATGAGGTTTGGTCTAGGATATAAACCAAATAAAATAGATATGGTTAGAGTTCACAAACAGCAAAAAAAGAATATTCCCCATCTTCATAATTCTTTCAAGTTTGGTGGTGTAGTCCATCTAGGAGATCAAAGCCCAACAGTTATGGTCGTGGTTAAAGATAAAGAAGAAGCAGATCCTTTGGTCTACTTATGCCCAGATAATTTTGAGCTTAACAACTGGACCATGATGGAACTTCCAACTATTATAAATGAAATTTCAAAGTAA

Protein sequence

MIGSVSTNFSDIMTIGERTKYGVKHGKIADAVGSSTIKKTPTKKKEEEVKDVACMLTSKEELFEILFNHGYIEMEPFQFDLVMNGYNDDLTCSYHAEAKGNSIDHCLCLKIHDSLDSRFLAVSQKMNEYPQEEVQIDAVEELSRNMMRFGLGYKPNKIDMVRVHKQQKKNIPHLHNSFKFGGVVHLGDQSPTVMVVVKDKEEADPLVYLCPDNFELNNWTMMELPTIINEISK

Homology

[Close]

BLAST of Sed0026166 vs. NCBI nr
Match: XP_022147189.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia])

HSP 1 Score: 85.5 bits (210), Expect = 6.6e-13
Identity = 40/114 (35.09%), Postives = 68/114 (59.65%), Query Frame = 0


Query: 136  IDAVEELSRNMMRFGLGYKPNKIDMVRVHKQQK----------------KNIPHLHNSFK 195
            +D +  +++N  +FGLGYKP++ D++RV   +K                + +P L +SF+
Sbjct: 1006 LDKLLRMAKNTKKFGLGYKPSRGDIIRVRSLEKAKRLSRFENEERDYPRRIVPPLTHSFR 1065

Query: 196  FGGVVHLG-DQSPTVMVVVKDKEEADPLVYLCPDNFELNNWTMMELPTIINEIS 233
              G +H   D+S  V  V +++E+  P VYLCPD FEL+NW++++LP+ +N  S
Sbjct: 1066 SAGTIHQEYDESSVVAAVTEEREQVGPFVYLCPDGFELSNWSVIKLPSFVNNKS 1119

[Close]

BLAST of Sed0026166 vs. NCBI nr
Match: XP_022147189.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia])

HSP 1 Score: 56.2 bits (134), Expect = 4.3e-04
Identity = 31/54 (57.41%), Postives = 38/54 (70.37%), Query Frame = 0


Query: 1   MIGSVSTNFSDIMTIGERTKYGVKHGKIADAVGS--STIKKTPTKKKEEEVKDV 53
           MIGS STNFSDIMTIGER +YGV+HG+I        +  K + +KKKE EV+ V
Sbjct: 242 MIGSASTNFSDIMTIGERIEYGVRHGRITSTTDEPLAAKKASHSKKKEGEVQMV 295

HSP 2 Score: 85.1 bits (209), Expect = 8.6e-13
Identity = 40/118 (33.90%), Postives = 69/118 (58.47%), Query Frame = 0


Query: 132 EEVQIDAVEELSRNMMRFGLGYKPNKIDMVRVHKQQK----------------KNIPHLH 191
           +   +D +  +++N  +FGLGYKP++ D++RV   +K                + +P L 
Sbjct: 209 DNASLDKLLMMAKNTKKFGLGYKPSRGDIIRVWSLEKAKRLSRFENEERDYPRRTVPPLS 268

Query: 192 NSFKFGGVVHLG-DQSPTVMVVVKDKEEADPLVYLCPDNFELNNWTMMELPTIINEIS 233
           +SF+  G++H   D+S  V  V +++E+  P VY CPD FEL+NW+++ELP+ +N  S
Sbjct: 269 HSFRSAGIIHQEYDESSVVAGVTEEREQVGPFVYPCPDGFELSNWSVLELPSFVNNKS 326

[Close]

BLAST of Sed0026166 vs. NCBI nr
Match: XP_022155744.1 (uncharacterized protein LOC111022791 [Momordica charantia])

HSP 1 Score: 83.6 bits (205), Expect = 2.5e-12
Identity = 40/115 (34.78%), Postives = 67/115 (58.26%), Query Frame = 0


Query: 136 IDAVEELSRNMMRFGLGYKPNKIDMVRVHKQQK----------------KNIPHLHNSFK 195
           +D +  +++N  +FGLGYK ++ D++RV   +K                + +P L +SF+
Sbjct: 422 LDKLLRMAKNTKKFGLGYKLSRGDIIRVRSLEKAKRLSRFENEERDYPRRIVPPLTHSFR 481

Query: 196 FGGVVHLG-DQSPTVMVVVKDKEEADPLVYLCPDNFELNNWTMMELPTIINEISK 234
             G +H   D+S  V  V +++E+  P VYLCPD FEL+NW+++ELP+ +N   K
Sbjct: 482 SAGTIHQEYDESSVVAAVTEEREQVGPFVYLCPDGFELSNWSVIELPSFVNNKXK 536

[Close]

BLAST of Sed0026166 vs. NCBI nr
Match: KAA0066013.1 (uncharacterized protein E6C27_scaffold32G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 77.0 bits (188), Expect = 2.4e-10
Identity = 83/338 (24.56%), Postives = 126/338 (37.28%), Query Frame = 0


Query: 1   MIGSVSTNFSDIMTIGERTKYGVKHGKIADAVG--SSTIKKTPTKKKEEEV--------- 60
           M G+ STNFS+I+ IGER +YG+KHGK+A+A        K T +KKKE EV         
Sbjct: 117 MSGNASTNFSNIIVIGERIEYGIKHGKLAEATTEYGGKEKGTISKKKEGEVHAIGFPNSG 176

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 177 NYVSTHTFFETPKPVNSNSPQPFVQGQGSKTNSDTWREKPNVNENPLPNHENPKVNVVDG 236

Query: 121 ------KDVACMLTSKEELFEILFNHGYIEMEPFQFDLVMNGYNDDLTCSYHAEAKGNSI 180
                  +V  ++   E LFE LF  GY+  E    D+   G        Y + A  N +
Sbjct: 237 LVEKCRNEVHEIMMPMEALFEGLFEAGYVSREYLDPDIRYEGLR-----PYESTAYSNEM 296

Query: 181 DHCLCLKIHDSLDSRFLAVSQKMNEYPQEEVQIDAVEELSRNMMRFGLGYKPNKIDMVRV 234
                +K H S        +     Y   +  ++ + +   N  RFGLGYK +  D +R+
Sbjct: 297 -----IKQHKSKVEVMTTRTMGGGGYSLNQ-NLETLLKTPSNDGRFGLGYKSSIYDKIRL 356

[Close]

BLAST of Sed0026166 vs. NCBI nr
Match: KAA0063823.1 (uncharacterized protein E6C27_scaffold827G00420 [Cucumis melo var. makuwa] >TYK07301.1 uncharacterized protein E5676_scaffold202G00120 [Cucumis melo var. makuwa])

HSP 1 Score: 77.0 bits (188), Expect = 2.4e-10
Identity = 64/247 (25.91%), Postives = 109/247 (44.13%), Query Frame = 0


Query: 1   MIGSVSTNFSDIMTIGERTKYGVKHGKIADAVGSSTIKKTPTKKKEEEVKDVACMLT--- 60
           M+GS STNFSD++ IG+  ++GVK+G+I D+  S T +   +KKK+EE+ +++       
Sbjct: 58  MVGSASTNFSDVIKIGKGIEFGVKNGRITDS-SSETRRMMTSKKKDEEIHELSSTKRVVH 117

Query: 61  -----------SKEELFEILFNH--GYIEMEPFQFDLVMNGYNDDLTCSYHAEAKGNSID 120
                      S + L ++L +H    +  EP Q    +  Y+ +  C YHA A G+S +
Sbjct: 118 VFSPNVGQTNYSPKLLLQLLKSHQVAIVLREPLQ-PPYLKWYDPNTKCEYHAGAVGHSTE 177

Query: 121 HCL-------CLKIHDSLDSRFLAVSQKMNEYPQEEVQIDAVEELSRNMMRFGLGYKPNK 180
           +C        CL     L  +       +N+ P    + D   E               K
Sbjct: 178 NCFPLKAKVQCLVKGGWLKFKKTGEEPDINQNPLPNYEDDHSIEDCFEFKNEAQKLMDAK 237

Query: 181 IDMVRVHKQQKKNIPHLHNSFKFGGVVHLGDQSPTVMVVVKDKEEADPLVYLCPDNFELN 225
           I ++     Q+  +    N               +++V+ ++   + PLVY CP  FELN
Sbjct: 238 ILLIGQMGMQEIKV----NIITDASSNKETSNDTSIVVISENTIPSHPLVYQCPPKFELN 297

[Close]

BLAST of Sed0026166 vs. ExPASy TrEMBL
Match: A0A6J1D099 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111016200 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 3.2e-13
Identity = 40/114 (35.09%), Postives = 68/114 (59.65%), Query Frame = 0


Query: 136  IDAVEELSRNMMRFGLGYKPNKIDMVRVHKQQK----------------KNIPHLHNSFK 195
            +D +  +++N  +FGLGYKP++ D++RV   +K                + +P L +SF+
Sbjct: 1006 LDKLLRMAKNTKKFGLGYKPSRGDIIRVRSLEKAKRLSRFENEERDYPRRIVPPLTHSFR 1065

Query: 196  FGGVVHLG-DQSPTVMVVVKDKEEADPLVYLCPDNFELNNWTMMELPTIINEIS 233
              G +H   D+S  V  V +++E+  P VYLCPD FEL+NW++++LP+ +N  S
Sbjct: 1066 SAGTIHQEYDESSVVAAVTEEREQVGPFVYLCPDGFELSNWSVIKLPSFVNNKS 1119

[Close]

BLAST of Sed0026166 vs. ExPASy TrEMBL
Match: A0A6J1D099 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111016200 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 2.1e-04
Identity = 31/54 (57.41%), Postives = 38/54 (70.37%), Query Frame = 0


Query: 1   MIGSVSTNFSDIMTIGERTKYGVKHGKIADAVGS--STIKKTPTKKKEEEVKDV 53
           MIGS STNFSDIMTIGER +YGV+HG+I        +  K + +KKKE EV+ V
Sbjct: 242 MIGSASTNFSDIMTIGERIEYGVRHGRITSTTDEPLAAKKASHSKKKEGEVQMV 295

HSP 2 Score: 85.1 bits (209), Expect = 4.2e-13
Identity = 40/118 (33.90%), Postives = 69/118 (58.47%), Query Frame = 0


Query: 132 EEVQIDAVEELSRNMMRFGLGYKPNKIDMVRVHKQQK----------------KNIPHLH 191
           +   +D +  +++N  +FGLGYKP++ D++RV   +K                + +P L 
Sbjct: 209 DNASLDKLLMMAKNTKKFGLGYKPSRGDIIRVWSLEKAKRLSRFENEERDYPRRTVPPLS 268

Query: 192 NSFKFGGVVHLG-DQSPTVMVVVKDKEEADPLVYLCPDNFELNNWTMMELPTIINEIS 233
           +SF+  G++H   D+S  V  V +++E+  P VY CPD FEL+NW+++ELP+ +N  S
Sbjct: 269 HSFRSAGIIHQEYDESSVVAGVTEEREQVGPFVYPCPDGFELSNWSVLELPSFVNNKS 326

[Close]

BLAST of Sed0026166 vs. ExPASy TrEMBL
Match: A0A6J1DR66 (uncharacterized protein LOC111022791 OS=Momordica charantia OX=3673 GN=LOC111022791 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.2e-12
Identity = 40/115 (34.78%), Postives = 67/115 (58.26%), Query Frame = 0


Query: 136 IDAVEELSRNMMRFGLGYKPNKIDMVRVHKQQK----------------KNIPHLHNSFK 195
           +D +  +++N  +FGLGYK ++ D++RV   +K                + +P L +SF+
Sbjct: 422 LDKLLRMAKNTKKFGLGYKLSRGDIIRVRSLEKAKRLSRFENEERDYPRRIVPPLTHSFR 481

Query: 196 FGGVVHLG-DQSPTVMVVVKDKEEADPLVYLCPDNFELNNWTMMELPTIINEISK 234
             G +H   D+S  V  V +++E+  P VYLCPD FEL+NW+++ELP+ +N   K
Sbjct: 482 SAGTIHQEYDESSVVAAVTEEREQVGPFVYLCPDGFELSNWSVIELPSFVNNKXK 536

[Close]

BLAST of Sed0026166 vs. ExPASy TrEMBL
Match: A0A5A7V6U2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G00120 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.1e-10
Identity = 64/247 (25.91%), Postives = 109/247 (44.13%), Query Frame = 0


Query: 1   MIGSVSTNFSDIMTIGERTKYGVKHGKIADAVGSSTIKKTPTKKKEEEVKDVACMLT--- 60
           M+GS STNFSD++ IG+  ++GVK+G+I D+  S T +   +KKK+EE+ +++       
Sbjct: 58  MVGSASTNFSDVIKIGKGIEFGVKNGRITDS-SSETRRMMTSKKKDEEIHELSSTKRVVH 117

Query: 61  -----------SKEELFEILFNH--GYIEMEPFQFDLVMNGYNDDLTCSYHAEAKGNSID 120
                      S + L ++L +H    +  EP Q    +  Y+ +  C YHA A G+S +
Sbjct: 118 VFSPNVGQTNYSPKLLLQLLKSHQVAIVLREPLQ-PPYLKWYDPNTKCEYHAGAVGHSTE 177

Query: 121 HCL-------CLKIHDSLDSRFLAVSQKMNEYPQEEVQIDAVEELSRNMMRFGLGYKPNK 180
           +C        CL     L  +       +N+ P    + D   E               K
Sbjct: 178 NCFPLKAKVQCLVKGGWLKFKKTGEEPDINQNPLPNYEDDHSIEDCFEFKNEAQKLMDAK 237

Query: 181 IDMVRVHKQQKKNIPHLHNSFKFGGVVHLGDQSPTVMVVVKDKEEADPLVYLCPDNFELN 225
           I ++     Q+  +    N               +++V+ ++   + PLVY CP  FELN
Sbjct: 238 ILLIGQMGMQEIKV----NIITDASSNKETSNDTSIVVISENTIPSHPLVYQCPPKFELN 297

[Close]

BLAST of Sed0026166 vs. ExPASy TrEMBL
Match: A0A5D3C619 (Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G003400 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.1e-10
Identity = 83/338 (24.56%), Postives = 126/338 (37.28%), Query Frame = 0


Query: 1   MIGSVSTNFSDIMTIGERTKYGVKHGKIADAVG--SSTIKKTPTKKKEEEV--------- 60
           M G+ STNFS+I+ IGER +YG+KHGK+A+A        K T +KKKE EV         
Sbjct: 117 MSGNASTNFSNIIVIGERIEYGIKHGKLAEATTEYGGKEKGTISKKKEGEVHAIGFPNSG 176

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 177 NYVSTHTFFETPKPVNSNSPQPFVQGQGSKTNSDTWREKPNVNENPLPNHENPKVNVVDG 236

Query: 121 ------KDVACMLTSKEELFEILFNHGYIEMEPFQFDLVMNGYNDDLTCSYHAEAKGNSI 180
                  +V  ++   E LFE LF  GY+  E    D+   G        Y + A  N +
Sbjct: 237 LVEKCRNEVHEIMMPMEALFEGLFEAGYVSREYLDPDIRYEGLR-----PYESTAYSNEM 296

Query: 181 DHCLCLKIHDSLDSRFLAVSQKMNEYPQEEVQIDAVEELSRNMMRFGLGYKPNKIDMVRV 234
                +K H S        +     Y   +  ++ + +   N  RFGLGYK +  D +R+
Sbjct: 297 -----IKQHKSKVEVMTTRTMGGGGYSLNQ-NLETLLKTPSNDGRFGLGYKSSIYDKIRL 356

The following BLAST results are available for this feature:

BLAST of Sed0026166 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147189.1	6.6e-13	35.09	LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia]	[more]
XP_022147189.1	4.3e-04	57.41	LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia]	[more]
XP_022155744.1	2.5e-12	34.78	uncharacterized protein LOC111022791 [Momordica charantia]	[more]
KAA0066013.1	2.4e-10	24.56	uncharacterized protein E6C27_scaffold32G00020 [Cucumis melo var. makuwa]	[more]
KAA0063823.1	2.4e-10	25.91	uncharacterized protein E6C27_scaffold827G00420 [Cucumis melo var. makuwa] >TYK0...	[more]

BLAST of Sed0026166 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0026166 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D099	3.2e-13	35.09	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111016200 PE=4 SV=1	[more]
A0A6J1D099	2.1e-04	57.41	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111016200 PE=4 SV=1	[more]
A0A6J1DR66	1.2e-12	34.78	uncharacterized protein LOC111022791 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A5A7V6U2	1.1e-10	25.91	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3C619	1.1e-10	24.56	Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G...	[more]

BLAST of Sed0026166 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0026166.1	Sed0026166.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process
molecular_function	GO:0003824	catalytic activity