Sed0026165 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGAAGAATGTAGCTCAGGCCTTTTCAGAGAGCCAAAATCTGGCCTCCCATGACCCAAAAGTGGCATTGGCCGAGACCTGTGCTATAGCTTTTTTATCTTTTTTTACTGAGATTTCTGATTAGGAACTAAAAGTAAGTAATGGGTATGTCTGGATTTTAGTTGCTCTGGTTTGATGATGCTCTACTGTGAGGTATTTGATGAGTTGGGTTGTTGAAATTAGTGGCGATTGATCATAATAATGGGTTGAGATTTTGGTTTTTTGATTATGCCTTTTAGCTGTTCGACGAAATTCCTCAAAGAGGGGTTTGTTGTTTTAGCTTCAAGAGTGGGTTGAAAGTAATGGGTATGTAGGGATTTTAGTTGTTCTGCTATTGCTTTTTTATCCAAAAGTAGGAATGGCCTGAGAGCTGTGCTAAAGGTATTGCTGTTTGATCTTTTTTTCTGAAATTTCTGATGAGGAACAAAAGGAAAGTAATGGGTATGTAAGTTCGTGTTTGCTACATAGATTATGATTAAGTTAGTCGGTATTAAGTTAAACTGAGAATTAAATTAATCTGTGTTTGATGAATAGTTTAAGTTAAGCTCACTGTGTTTGGTGGAAGGATTAAGTTAATCTGAATTTTTAATTAACATTTTTCATGTTTTTTTTAATGTCTACTCTTCATCTAAAACTATTTGTTTTAAAATTTCAATTGATTTTAAATTATTATTAATTATTTCAAAGTTCAATTCACTAAAAAAAATTCATTTTTTATTTTTCAAAAATCCAAAATTGTTTTTATGTGAAGAAAATTTCAATTGTTTTAGAACAATTTTTATATATTTTGAATTCAAATAAATTTGATACGATAAAACAAGTTACTTCAATAAGATACTATAATTAAATTTAAGTATCATATTTTAAATCTACCTTTTGATAATCGTTGATGTGGTAGTTTAATTTAGGAAAATTGTTTGGAATTCATAATTGTGGTTGAAATTAACCATGGAAAATAAAACCCATAATAATAAACCAAAATGTTTAAGATGGGTATAAAACTAGATTTTAATAATAAAATTGATATTAACAAAAATAATGTTTATAAATTTAATTTTAAAAACAAAAAATACTATTATCAAATTATATCTCTAACAACAAAATGTTGATCCATCCAAATAATCATCTTTTTGAAATCAATTAAGATACAAAATTGATCAAAATTGCACACCATGCCAAAAATATGATCCTCAATAATTTGGTATGTGATCCTCAGTGATCAAATTATTGAAGAACAAGGCAATTAATAACAGATTCTATTAAAAAGATCTAGCAATAAATATAAGAGTCATACATAAACATAAAATGAATCAATAAATTCTTGAAAAAAATGGATAAATAAAAGACAGTAAAAGAGATTTTCATTTATACCGAAATAAAAATAGTCTCTTTTTTTTAGAAAGAAAATAAAAATAGTCTAATTATAAACATAATCAGTTAAATAATTTACTAATTAACAGTAATATTTCATTTGGGTCAATTACCAATTCCAGAAAGCCAATTTTTCAAGGAAAAAAACAAAAATCGGAAAAATTTTCTTAATCACACCTTTGGATAACAACAAATCACTCGAAATAATCAGAAAGGCCAAAAAATTATCGAGAAAATAACCAAGATCGGCAGGGATTTGATCCAAATTTGAAAAGCTTGGGATCGCCGTTTGACGAATAGATAGTTAAACAAAGAAATAGAAAGAGTTAAAGATCTCAAGCGTTGAAAAAACGAAATCGGACTTTAAAGTCCTTAAAAATTAGGTCATTCGAAAGGGAAAAAAACCTCTGAAACTTGTTGCAAGAAGAAAATAAAAAATAGAAGAACAATGTAGAAGGAAGAAAAAAAAATGAAAAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGATGCAGAGAGAGGGTAGATGGAGAAGACGAAGCGTTTGAATCGCATTTACTGTTGGTCGGCTTTACCTAGAATTTCGCAAGTTTACATTAATCCGAGCTTGATTAACTCTTCCACCAAACACAATTTTGAGGGGTTAAAGTAACCCGGATTAACTAAACGCCTCCACCAAACACGCCGTAAGGGTTTTAGTTGCTCTGGTTTGATGATGCTAATTGTGATGTATTTGATGAGGTATGTTGTTGAAAATAGTGAGTGATTGGTCCCCAAGGGGTGCACGGTGGTTAAAGACTTGGACTTTGAGGGTATGCTCCCCTCAAGGTCTCAGGTTCGAGACTCAGCCATGACATTACTCATTCGATGTCTCTTGGTGCCTAGCCTAGACATGGGCGTGATTACTCCTTTTTCAAAAAAAAAATAGTGAGTGATTGATCATAATTATGGGTTAAGATGTCTCCAAGGGGTGGCACAGTGGTTGAAGACTTGAGCTTTGATGGTATGCTCCCTTTAAGGTCTTAGGTTCGAGACTCAGCTGTGACATTACTCCTTGGATATCTCTCGGTGCTTGGCCTAGAGACGGGCGTGGTTACCCTTGTTTCAAAAAAAAAAAAAAAAAAAATTATGGGTTAAGATTTGTTTTTTTTTATAATGCCTTATAGGTTCGACCAAATTCCTCAAAGAGGGGTTTGTTCTTTTAGCTTCATGAATGGATTGAAAGTAAAAGGGTTCTTAGTTTGTATGTTTGAGGGACCATGTTCACCTTCCCCACCAACTCTTCTTTTATAGTTAATGATTTAAGTAAAAGCTAAAGAGAGAGATGGGGTGTGATGCATGCGCATGTTGATTGGATATATGCTATGTTTTTCTTTTACTGATTTGATTGTTTTGATCCATTGTTGGTGGACCATGATCCACTTCAGATTTAGTGCAATGAAAATAAGTAATTGCTGATGGGTTTGTTTGTCTTTGTAAAATTTGCTTTTATCATCAGCATCTGTAGCTAATGGGGTTAGGTTTCTTCTTTTTTGTTGGACAGAGGGCGTGATAGCAGGAGCTAAAGCAGCTGCTATTGCAAGTATTGCCACTGCCATTCCCACTGTAAGTTCTCTTATTCAAAAAGCACTTATACTGATCCTTTTCTTTCCTTTTTGGAGAGTAAATAATATCACTCATCAGATTCTACTTTTGTATGGAAATTATGACCAAATTAGCTGTAGAACTCGATCCTCAACTGAACCAAATAAATATTTCCGATTTCAGATAGGTTTCTAGCGAACCGAACGCTGTAATCAGCGATTTTGGGGAATTCGATAACGATCCTGGATTCCAAACCATCGAACCAAATGCCTCCTAGTGGAAAAACTTAATCCTTAACTGATATATATGTAGTCATAGATGATTTAAATACGGGAGTAAAATTTTGTCCCTCGTGATAATTTATGGATCTTCCATTATCGAAAGTTGAGTCAATGCACAGCTGCTGTTGCTGTCACATTATTCAGTCATGTTGAATATCTTATATCGAAAAGATGGAGAGACCTCAAGCATGAACAGGATAGATACATAAACTACTCATTTCGTTCTTAATTAATTTTGAGATGAAATCTCATGTTTATCGAATAGGCCTGGCTGCCTGAATATTAGAGAATATGAGGTTTCATCTTCAAATTAATTGGCAATGAAGGGAGTAACCAACATCTCTTTTATATTGATGTTGGACTCTCGCACTTTTCAATGTGGGACATTTGTGAGATCCTAACATGCCCCTTAAGATGGTGTCTTTTTTGGGCTCACCAATCTTGAATCGAAACTCAATTTTATTTTTATTGGACCGATACCCGTTTGGACTTTATGGACTCTGATACCATATTAGAGATATGAGGTTCCACCTCAAAATCAATTGGCAATGAGGGGAGTAACTCATTACTCATGTGTCATTGATGTTAGACATTTGTGAGACCCTGACACTGAACAATGAATGAGCTAATCAATTTAGCTGGAATTGTTTTTATCTTGCAGTTTGCAAGTGTGGGCAAAAGCTCATCTGAATTCCACAGCTCAAGCTCTCATAATCTCCTCAGGTTCAACTTTTTTCCTTTGCAATTGCATCCAAGTCATTATATGGTTTCACTTTCATTTGCTTTTCTTTACTTTACAAAGGCTTGTTTTTTCAATGGCAGTGGCTGGAGCTGCTTACTTCATAGTGGCTGACAAGACTGTTCTTGCAACATCCCAACACTAA ATGGCGAAGAATGTAGCTCAGGCCTTTTCAGAGAGCCAAAATCTGGCCTCCCATGACCCAAAAGTGGCATTGGCCGAGACCTCTAATGGGGTTAGGTTTCTTCTTTTTTGTTGGACAGAGGGCGTGATAGCAGGAGCTAAAGCAGCTGCTATTGCAAGTATTGCCACTGCCATTCCCACTCTGGAATTGTTTTTATCTTGCAGTTTGCAAGTGTGGGCAAAAGCTCATCTGAATTCCACAGCTCAAGCTCTCATAATCTCCTCAGTGGCTGGAGCTGCTTACTTCATAGTGGCTGACAAGACTGTTCTTGCAACATCCCAACACTAA ATGGCGAAGAATGTAGCTCAGGCCTTTTCAGAGAGCCAAAATCTGGCCTCCCATGACCCAAAAGTGGCATTGGCCGAGACCTCTAATGGGGTTAGGTTTCTTCTTTTTTGTTGGACAGAGGGCGTGATAGCAGGAGCTAAAGCAGCTGCTATTGCAAGTATTGCCACTGCCATTCCCACTCTGGAATTGTTTTTATCTTGCAGTTTGCAAGTGTGGGCAAAAGCTCATCTGAATTCCACAGCTCAAGCTCTCATAATCTCCTCAGTGGCTGGAGCTGCTTACTTCATAGTGGCTGACAAGACTGTTCTTGCAACATCCCAACACTAA MAKNVAQAFSESQNLASHDPKVALAETSNGVRFLLFCWTEGVIAGAKAAAIASIATAIPTLELFLSCSLQVWAKAHLNSTAQALIISSVAGAAYFIVADKTVLATSQH Homology
BLAST of Sed0026165 vs. NCBI nr
Match: KAA0061591.1 (early nodulin-93-like [Cucumis melo var. makuwa] >TYJ97800.1 early nodulin-93-like [Cucumis melo var. makuwa]) HSP 1 Score: 124.8 bits (312), Expect = 4.6e-25 Identity = 76/107 (71.03%), Postives = 84/107 (78.50%), Query Frame = 0
BLAST of Sed0026165 vs. NCBI nr
Match: XP_008457774.1 (PREDICTED: early nodulin-93-like [Cucumis melo]) HSP 1 Score: 124.8 bits (312), Expect = 4.6e-25 Identity = 76/107 (71.03%), Postives = 84/107 (78.50%), Query Frame = 0
BLAST of Sed0026165 vs. NCBI nr
Match: XP_004139321.1 (early nodulin-93 [Cucumis sativus] >KGN60663.1 hypothetical protein Csa_019393 [Cucumis sativus]) HSP 1 Score: 124.0 bits (310), Expect = 7.8e-25 Identity = 75/107 (70.09%), Postives = 84/107 (78.50%), Query Frame = 0
BLAST of Sed0026165 vs. NCBI nr
Match: XP_022937499.1 (early nodulin-93-like [Cucurbita moschata]) HSP 1 Score: 123.6 bits (309), Expect = 1.0e-24 Identity = 75/107 (70.09%), Postives = 84/107 (78.50%), Query Frame = 0
BLAST of Sed0026165 vs. NCBI nr
Match: XP_038889722.1 (early nodulin-93-like [Benincasa hispida]) HSP 1 Score: 122.5 bits (306), Expect = 2.3e-24 Identity = 76/107 (71.03%), Postives = 84/107 (78.50%), Query Frame = 0
BLAST of Sed0026165 vs. ExPASy Swiss-Prot
Match: Q02921 (Early nodulin-93 OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 1.5e-15 Identity = 54/97 (55.67%), Postives = 67/97 (69.07%), Query Frame = 0
BLAST of Sed0026165 vs. ExPASy TrEMBL
Match: A0A5A7V781 (Early nodulin-93-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00100 PE=4 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 2.2e-25 Identity = 76/107 (71.03%), Postives = 84/107 (78.50%), Query Frame = 0
BLAST of Sed0026165 vs. ExPASy TrEMBL
Match: A0A1S3C6F4 (early nodulin-93-like OS=Cucumis melo OX=3656 GN=LOC103497382 PE=4 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 2.2e-25 Identity = 76/107 (71.03%), Postives = 84/107 (78.50%), Query Frame = 0
BLAST of Sed0026165 vs. ExPASy TrEMBL
Match: A0A0A0LFY1 (Early nodulin 93 protein OS=Cucumis sativus OX=3659 GN=Csa_2G006090 PE=4 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 3.8e-25 Identity = 75/107 (70.09%), Postives = 84/107 (78.50%), Query Frame = 0
BLAST of Sed0026165 vs. ExPASy TrEMBL
Match: A0A6J1FBC4 (early nodulin-93-like OS=Cucurbita moschata OX=3662 GN=LOC111443891 PE=4 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 4.9e-25 Identity = 75/107 (70.09%), Postives = 84/107 (78.50%), Query Frame = 0
BLAST of Sed0026165 vs. ExPASy TrEMBL
Match: A0A6J1HQF2 (early nodulin-93-like OS=Cucurbita maxima OX=3661 GN=LOC111465732 PE=4 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 1.1e-24 Identity = 74/107 (69.16%), Postives = 84/107 (78.50%), Query Frame = 0
BLAST of Sed0026165 vs. TAIR 10
Match: AT5G25940.1 (early nodulin-related ) HSP 1 Score: 65.9 bits (159), Expect = 2.3e-11 Identity = 39/63 (61.90%), Postives = 50/63 (79.37%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|