Sed0026086 (gene) Chayote v1

Overview


Name	Sed0026086
Type	gene
Organism	Sechium edule (Chayote v1)
Description	transcription factor PRE5-like
Location	LG01: 17766285 .. 17767009 (+)
RNA-Seq Expression	Sed0026086
Synteny	Sed0026086

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTCCTCGAAATTAGGCGACGAGGAGATTCAAAATCTAGTGTTGAAATTACAAACCTTGCTACCTCACCTCAACGGTCGTAAGCTGGGCGACATGAACTCTACGGTTATCAATCTATATTCTCTTCTTAATTTAATGAACATATTACTTACGTCCTTTTTGATAAACCATTTTGTTTTTCGTTTTTTGTTTATGAAATTTAAACTTACACCAACTATCTTACTATACCTTCTTCCTTATTTGAATATCTACATCTTACCTATATTTTAATAAACAAAACTAAAATTTGAAAATAAAAAAAGGTAGCTTCCAAAAACTTGTTTTTGCGTTTTGAAATTTGATTAGTATTCACCTATTTTTTTAAGGAAATATGAATATATTGTAAGAAAGATGGAACACATGGTAAGAAATTTGAGTAGAAATAAGTTTAAATTTTATAAATTAAAAACAAAAAACTAAATAATTATTAGACGGAACCTTAATTAATAAATTATAGAATATACGAGATGTGGTTGTGACGTAGAATATTATAGAATATGGTATGGTGCATGCAGGGATCGGCGGCGGGGGAGATTTTGAAGGAGACGTGTGATTATATAAAGAAATTGCAGAGGGAGGTGGATGATCTAAGTCACAGGCTGTGGAGCCACCTGGAATCAATGGATCCTGGCCTTGACTTTGACATCCTTAAACATCTTCTTCTTACTAATTTCCAAATTTAA

mRNA sequence

ATGGGTTCCTCGAAATTAGGCGACGAGGAGATTCAAAATCTAGTGTTGAAATTACAAACCTTGCTACCTCACCTCAACGGTCGTAAGCTGGGCGACATGAACTCTACGGGATCGGCGGCGGGGGAGATTTTGAAGGAGACGTGTGATTATATAAAGAAATTGCAGAGGGAGGTGGATGATCTAAGTCACAGGCTGTGGAGCCACCTGGAATCAATGGATCCTGGCCTTGACTTTGACATCCTTAAACATCTTCTTCTTACTAATTTCCAAATTTAA

Coding sequence (CDS)

ATGGGTTCCTCGAAATTAGGCGACGAGGAGATTCAAAATCTAGTGTTGAAATTACAAACCTTGCTACCTCACCTCAACGGTCGTAAGCTGGGCGACATGAACTCTACGGGATCGGCGGCGGGGGAGATTTTGAAGGAGACGTGTGATTATATAAAGAAATTGCAGAGGGAGGTGGATGATCTAAGTCACAGGCTGTGGAGCCACCTGGAATCAATGGATCCTGGCCTTGACTTTGACATCCTTAAACATCTTCTTCTTACTAATTTCCAAATTTAA

Protein sequence

MGSSKLGDEEIQNLVLKLQTLLPHLNGRKLGDMNSTGSAAGEILKETCDYIKKLQREVDDLSHRLWSHLESMDPGLDFDILKHLLLTNFQI

Homology

[Close]

BLAST of Sed0026086 vs. NCBI nr
Match: XP_011649678.1 (transcription factor PRE5 [Cucumis sativus] >KGN63980.1 hypothetical protein Csa_014368 [Cucumis sativus])

HSP 1 Score: 108.2 bits (269), Expect = 3.7e-20
Identity = 57/85 (67.06%), Postives = 68/85 (80.00%), Query Frame = 0


Query: 1  MGSSKLGDEEIQNLVLKLQTLLPHLNGRKLGDMNSTGSAAGEILKETCDYIKKLQREVDD 60
          M SSKLGD+E++NLV KLQTLLP LN +     NS+  +AGEILKETCDYIKKLQREVDD
Sbjct: 1  MASSKLGDDELKNLVSKLQTLLPQLNHK---PHNSSEVSAGEILKETCDYIKKLQREVDD 60

Query: 61 LSHRLWSHLESMDPGLDFDILKHLL 86
          LS RLW  L+SM  G+DF+++K LL
Sbjct: 61 LSERLWKQLDSM--GIDFEMVKDLL 80

[Close]

BLAST of Sed0026086 vs. NCBI nr
Match: XP_038895474.1 (transcription factor PRE5-like [Benincasa hispida])

HSP 1 Score: 104.8 bits (260), Expect = 4.1e-19
Identity = 54/86 (62.79%), Postives = 68/86 (79.07%), Query Frame = 0


Query: 1   MGSSKLGDEEIQNLVLKLQTLLPHLNGRKLGDMNSTGSAAGEILKETCDYIKKLQREVDD 60
           M SSKL D+++QNLV KLQTLLPHLN RK  + ++   +A +ILKETCDYIKKLQREVDD
Sbjct: 42  MASSKLADDDLQNLVFKLQTLLPHLN-RKPDNDSAVSVSATDILKETCDYIKKLQREVDD 101

Query: 61  LSHRLWSHLESMDPGLDFDILKHLLL 87
           LS RLW  L+SM  G+D +++K L+L
Sbjct: 102 LSERLWKQLDSM--GVDLEMVKDLIL 124

[Close]

BLAST of Sed0026086 vs. NCBI nr
Match: XP_008440200.1 (PREDICTED: transcription factor PRE5-like [Cucumis melo] >KAA0036068.1 transcription factor PRE5-like [Cucumis melo var. makuwa])

HSP 1 Score: 104.4 bits (259), Expect = 5.4e-19
Identity = 54/86 (62.79%), Postives = 68/86 (79.07%), Query Frame = 0


Query: 1  MGSSKLGDEEIQNLVLKLQTLLPHLNGRKLGDMNSTGSAAGEILKETCDYIKKLQREVDD 60
          M SSKLGD E++NLV KL+TLLP LN +     NS+ ++ GEILKETCDYIKKLQ+EVDD
Sbjct: 1  MASSKLGDNELKNLVSKLRTLLPQLNHK---PDNSSEASTGEILKETCDYIKKLQKEVDD 60

Query: 61 LSHRLWSHLESMDPGLDFDILKHLLL 87
          LS RLW  L+SM  G+DF+++K LL+
Sbjct: 61 LSERLWKQLDSM--GVDFEMVKDLLI 81

[Close]

BLAST of Sed0026086 vs. NCBI nr
Match: TYJ98875.1 (transcription factor PRE5-like [Cucumis melo var. makuwa])

HSP 1 Score: 99.4 bits (246), Expect = 1.7e-17
Identity = 51/80 (63.75%), Postives = 63/80 (78.75%), Query Frame = 0


Query: 1  MGSSKLGDEEIQNLVLKLQTLLPHLNGRKLGDMNSTGSAAGEILKETCDYIKKLQREVDD 60
          M SSKLGD E++NLV KL+TLLP LN +     NS+ ++ GEILKETCDYIKKLQ+EVDD
Sbjct: 1  MASSKLGDNELKNLVSKLRTLLPQLNHK---PDNSSEASTGEILKETCDYIKKLQKEVDD 60

Query: 61 LSHRLWSHLESMDPGLDFDI 81
          LS RLW  L+SM  G+DF++
Sbjct: 61 LSERLWKQLDSM--GVDFEM 75

[Close]

BLAST of Sed0026086 vs. NCBI nr
Match: KAG6584448.1 (Transcription factor PRE5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 96.3 bits (238), Expect = 1.5e-16
Identity = 49/85 (57.65%), Postives = 65/85 (76.47%), Query Frame = 0


Query: 1  MGSSKLGDEEIQNLVLKLQTLLPHLNGRKLGDMNSTGSAAGEILKETCDYIKKLQREVDD 60
          M SS L D++++NL+ +LQTLLP LN      ++++  +  EILKETCDYIKKLQREVDD
Sbjct: 1  MASSTLPDDQLRNLLSRLQTLLPQLN----HTLHTSTVSTAEILKETCDYIKKLQREVDD 60

Query: 61 LSHRLWSHLESMDPGLDFDILKHLL 86
          LS RLW  L+SM  G+DF+++KHLL
Sbjct: 61 LSERLWKQLDSM--GIDFEMVKHLL 79

[Close]

BLAST of Sed0026086 vs. ExPASy Swiss-Prot
Match: A2XD15 (Transcription factor ILI3 OS=Oryza sativa subsp. indica OX=39946 GN=ILI3 PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.6e-10
Identity = 36/72 (50.00%), Postives = 47/72 (65.28%), Query Frame = 0


Query: 2  GSSKLGDEEIQNLVLKLQTLLPHLNGRKLGDMNSTGSAAGEILKETCDYIKKLQREVDDL 61
          G  ++ DEEI  L+ KLQ LLP  + R  G   ++ S+A ++LKETC YIK L REVDDL
Sbjct: 10 GGGRITDEEINELISKLQALLPE-SSRSRG---ASRSSASKLLKETCSYIKSLHREVDDL 69

Query: 62 SHRLWSHLESMD 74
          S RL   + +MD
Sbjct: 70 SDRLSELMSTMD 77

[Close]

BLAST of Sed0026086 vs. ExPASy Swiss-Prot
Match: Q10R47 (Transcription factor ILI3 OS=Oryza sativa subsp. japonica OX=39947 GN=ILI3 PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.6e-10
Identity = 36/72 (50.00%), Postives = 47/72 (65.28%), Query Frame = 0


Query: 2  GSSKLGDEEIQNLVLKLQTLLPHLNGRKLGDMNSTGSAAGEILKETCDYIKKLQREVDDL 61
          G  ++ DEEI  L+ KLQ LLP  + R  G   ++ S+A ++LKETC YIK L REVDDL
Sbjct: 10 GGGRITDEEINELISKLQALLPE-SSRSRG---ASRSSASKLLKETCSYIKSLHREVDDL 69

Query: 62 SHRLWSHLESMD 74
          S RL   + +MD
Sbjct: 70 SDRLSELMSTMD 77

[Close]

BLAST of Sed0026086 vs. ExPASy Swiss-Prot
Match: Q8GW32 (Transcription factor PRE6 OS=Arabidopsis thaliana OX=3702 GN=PRE6 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.1e-10
Identity = 35/72 (48.61%), Postives = 48/72 (66.67%), Query Frame = 0


Query: 2  GSSKLGDEEIQNLVLKLQTLLPHLNGRKLGDMNSTGSAAGEILKETCDYIKKLQREVDDL 61
          GSS++ D++I +LV KLQ L+P L  R+     S   +A ++L+ETC+YI+ L REVDDL
Sbjct: 13 GSSRISDDQISDLVSKLQHLIPELRRRR-----SDKVSASKVLQETCNYIRNLHREVDDL 72

Query: 62 SHRLWSHLESMD 74
          S RL   L S D
Sbjct: 73 SDRLSELLASTD 79

[Close]

BLAST of Sed0026086 vs. ExPASy Swiss-Prot
Match: F4JCN9 (Transcription factor PRE4 OS=Arabidopsis thaliana OX=3702 GN=PRE4 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 4.7e-10
Identity = 36/73 (49.32%), Postives = 48/73 (65.75%), Query Frame = 0


Query: 2  GSSKLGDEEIQNLVLKLQTLLPHL-NGRKLGDMNSTGSAAGEILKETCDYIKKLQREVDD 61
          G+S + DE+I +LVL+L  LLP L N R+ G +     +A  +L+ETC YI+ L +EVDD
Sbjct: 12 GASMITDEQINDLVLQLHRLLPELANNRRSGKV-----SASRVLQETCSYIRNLSKEVDD 71

Query: 62 LSHRLWSHLESMD 74
          LS RL   LES D
Sbjct: 72 LSERLSQLLESTD 79

[Close]

BLAST of Sed0026086 vs. ExPASy Swiss-Prot
Match: Q9CA64 (Transcription factor PRE3 OS=Arabidopsis thaliana OX=3702 GN=PRE3 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.8e-09
Identity = 31/72 (43.06%), Postives = 47/72 (65.28%), Query Frame = 0


Query: 2  GSSKLGDEEIQNLVLKLQTLLPHLNGRKLGDMNSTGSAAGEILKETCDYIKKLQREVDDL 61
          G+S++ +++I +L++KLQ LLP L   +  D  S    A  +L++TC+YI+ L REVDDL
Sbjct: 13 GTSRISEDQINDLIIKLQQLLPELRDSRRSDKVS----AARVLQDTCNYIRNLHREVDDL 72

Query: 62 SHRLWSHLESMD 74
          S RL   L + D
Sbjct: 73 SERLSELLANSD 80

[Close]

BLAST of Sed0026086 vs. ExPASy TrEMBL
Match: A0A0A0LQ05 (DNA binding protein OS=Cucumis sativus OX=3659 GN=Csa_1G032990 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.8e-20
Identity = 57/85 (67.06%), Postives = 68/85 (80.00%), Query Frame = 0


Query: 1  MGSSKLGDEEIQNLVLKLQTLLPHLNGRKLGDMNSTGSAAGEILKETCDYIKKLQREVDD 60
          M SSKLGD+E++NLV KLQTLLP LN +     NS+  +AGEILKETCDYIKKLQREVDD
Sbjct: 1  MASSKLGDDELKNLVSKLQTLLPQLNHK---PHNSSEVSAGEILKETCDYIKKLQREVDD 60

Query: 61 LSHRLWSHLESMDPGLDFDILKHLL 86
          LS RLW  L+SM  G+DF+++K LL
Sbjct: 61 LSERLWKQLDSM--GIDFEMVKDLL 80

[Close]

BLAST of Sed0026086 vs. ExPASy TrEMBL
Match: A0A5A7SZP9 (Transcription factor PRE5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold112G00610 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.6e-19
Identity = 54/86 (62.79%), Postives = 68/86 (79.07%), Query Frame = 0


Query: 1  MGSSKLGDEEIQNLVLKLQTLLPHLNGRKLGDMNSTGSAAGEILKETCDYIKKLQREVDD 60
          M SSKLGD E++NLV KL+TLLP LN +     NS+ ++ GEILKETCDYIKKLQ+EVDD
Sbjct: 1  MASSKLGDNELKNLVSKLRTLLPQLNHK---PDNSSEASTGEILKETCDYIKKLQKEVDD 60

Query: 61 LSHRLWSHLESMDPGLDFDILKHLLL 87
          LS RLW  L+SM  G+DF+++K LL+
Sbjct: 61 LSERLWKQLDSM--GVDFEMVKDLLI 81

[Close]

BLAST of Sed0026086 vs. ExPASy TrEMBL
Match: A0A1S3B0J1 (transcription factor PRE5-like OS=Cucumis melo OX=3656 GN=LOC103484708 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.6e-19
Identity = 54/86 (62.79%), Postives = 68/86 (79.07%), Query Frame = 0


Query: 1  MGSSKLGDEEIQNLVLKLQTLLPHLNGRKLGDMNSTGSAAGEILKETCDYIKKLQREVDD 60
          M SSKLGD E++NLV KL+TLLP LN +     NS+ ++ GEILKETCDYIKKLQ+EVDD
Sbjct: 1  MASSKLGDNELKNLVSKLRTLLPQLNHK---PDNSSEASTGEILKETCDYIKKLQKEVDD 60

Query: 61 LSHRLWSHLESMDPGLDFDILKHLLL 87
          LS RLW  L+SM  G+DF+++K LL+
Sbjct: 61 LSERLWKQLDSM--GVDFEMVKDLLI 81

[Close]

BLAST of Sed0026086 vs. ExPASy TrEMBL
Match: A0A5D3BKI2 (Transcription factor PRE5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00710 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 8.4e-18
Identity = 51/80 (63.75%), Postives = 63/80 (78.75%), Query Frame = 0


Query: 1  MGSSKLGDEEIQNLVLKLQTLLPHLNGRKLGDMNSTGSAAGEILKETCDYIKKLQREVDD 60
          M SSKLGD E++NLV KL+TLLP LN +     NS+ ++ GEILKETCDYIKKLQ+EVDD
Sbjct: 1  MASSKLGDNELKNLVSKLRTLLPQLNHK---PDNSSEASTGEILKETCDYIKKLQKEVDD 60

Query: 61 LSHRLWSHLESMDPGLDFDI 81
          LS RLW  L+SM  G+DF++
Sbjct: 61 LSERLWKQLDSM--GVDFEM 75

[Close]

BLAST of Sed0026086 vs. ExPASy TrEMBL
Match: A0A438BUK7 (Transcription factor PRE5 OS=Vitis vinifera OX=29760 GN=PRE5_1 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 6.9e-12
Identity = 44/85 (51.76%), Postives = 60/85 (70.59%), Query Frame = 0


Query: 3  SSKLGDEEIQNLVLKLQTLLPHLNGRKLGDMNSTGSAAGEILKETCDYIKKLQREVDDLS 62
          +S++ D+EI +L+LKLQ LLPH N R+     STG++A  ILKETC YIK+L REV DLS
Sbjct: 8  ASRVTDDEINDLILKLQALLPHSNQRR----TSTGASAWRILKETCSYIKRLHREVGDLS 67

Query: 63 HRLWSHLESMD--PGLDFDILKHLL 86
           RL   L+S+D   G++ + L+ LL
Sbjct: 68 ERLSQLLDSLDNINGVEVEQLRSLL 88

[Close]

BLAST of Sed0026086 vs. TAIR 10
Match: AT1G26945.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 66.2 bits (160), Expect = 1.5e-11
Identity = 35/72 (48.61%), Postives = 48/72 (66.67%), Query Frame = 0


Query: 2  GSSKLGDEEIQNLVLKLQTLLPHLNGRKLGDMNSTGSAAGEILKETCDYIKKLQREVDDL 61
          GSS++ D++I +LV KLQ L+P L  R+     S   +A ++L+ETC+YI+ L REVDDL
Sbjct: 13 GSSRISDDQISDLVSKLQHLIPELRRRR-----SDKVSASKVLQETCNYIRNLHREVDDL 72

Query: 62 SHRLWSHLESMD 74
          S RL   L S D
Sbjct: 73 SDRLSELLASTD 79

[Close]

BLAST of Sed0026086 vs. TAIR 10
Match: AT3G47710.1 (BANQUO 3 )

HSP 1 Score: 65.1 bits (157), Expect = 3.4e-11
Identity = 36/73 (49.32%), Postives = 48/73 (65.75%), Query Frame = 0


Query: 2  GSSKLGDEEIQNLVLKLQTLLPHL-NGRKLGDMNSTGSAAGEILKETCDYIKKLQREVDD 61
          G+S + DE+I +LVL+L  LLP L N R+ G +     +A  +L+ETC YI+ L +EVDD
Sbjct: 12 GASMITDEQINDLVLQLHRLLPELANNRRSGKV-----SASRVLQETCSYIRNLSKEVDD 71

Query: 62 LSHRLWSHLESMD 74
          LS RL   LES D
Sbjct: 72 LSERLSQLLESTD 79

[Close]

BLAST of Sed0026086 vs. TAIR 10
Match: AT1G74500.1 (activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1 )

HSP 1 Score: 63.2 bits (152), Expect = 1.3e-10
Identity = 31/72 (43.06%), Postives = 47/72 (65.28%), Query Frame = 0


Query: 2  GSSKLGDEEIQNLVLKLQTLLPHLNGRKLGDMNSTGSAAGEILKETCDYIKKLQREVDDL 61
          G+S++ +++I +L++KLQ LLP L   +  D  S    A  +L++TC+YI+ L REVDDL
Sbjct: 13 GTSRISEDQINDLIIKLQQLLPELRDSRRSDKVS----AARVLQDTCNYIRNLHREVDDL 72

Query: 62 SHRLWSHLESMD 74
          S RL   L + D
Sbjct: 73 SERLSELLANSD 80

[Close]

BLAST of Sed0026086 vs. TAIR 10
Match: AT3G28857.1 (basic helix-loop-helix (bHLH) DNA-binding family protein )

HSP 1 Score: 61.6 bits (148), Expect = 3.7e-10
Identity = 31/71 (43.66%), Postives = 50/71 (70.42%), Query Frame = 0


Query: 3  SSKLGDEEIQNLVLKLQTLLPHLNGRKLGDMNSTGSAAGEILKETCDYIKKLQREVDDLS 62
          +S++ D+++ +LV KL+  LP ++ R+  D  S    A ++L+ETC+YI+KL REVD+LS
Sbjct: 12 ASRISDDQMIDLVSKLRQFLPEIHERRRSDKVS----ASKVLQETCNYIRKLHREVDNLS 71

Query: 63 HRLWSHLESMD 74
           RL   L+S+D
Sbjct: 72 DRLSQLLDSVD 78

[Close]

BLAST of Sed0026086 vs. TAIR 10
Match: AT5G15160.1 (BANQUO 2 )

HSP 1 Score: 61.2 bits (147), Expect = 4.9e-10
Identity = 29/72 (40.28%), Postives = 47/72 (65.28%), Query Frame = 0


Query: 3  SSKLGDEEIQNLVLKLQTLLPHLNGRKLGDMNSTGSAAGEILKETCDYIKKLQREVDDLS 62
          SS++ D++I +L+ KL+  +P +   +     S   +A ++L+ETC+YI+ L +E DDLS
Sbjct: 13 SSRISDDQITDLISKLRQSIPEIRQNR----RSNTVSASKVLQETCNYIRNLNKEADDLS 72

Query: 63 HRLWSHLESMDP 75
           RL   LES+DP
Sbjct: 73 DRLTQLLESIDP 80

The following BLAST results are available for this feature:

BLAST of Sed0026086 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011649678.1	3.7e-20	67.06	transcription factor PRE5 [Cucumis sativus] >KGN63980.1 hypothetical protein Csa...	[more]
XP_038895474.1	4.1e-19	62.79	transcription factor PRE5-like [Benincasa hispida]	[more]
XP_008440200.1	5.4e-19	62.79	PREDICTED: transcription factor PRE5-like [Cucumis melo] >KAA0036068.1 transcrip...	[more]
TYJ98875.1	1.7e-17	63.75	transcription factor PRE5-like [Cucumis melo var. makuwa]	[more]
KAG6584448.1	1.5e-16	57.65	Transcription factor PRE5, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Sed0026086 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2XD15	1.6e-10	50.00	Transcription factor ILI3 OS=Oryza sativa subsp. indica OX=39946 GN=ILI3 PE=3 SV...	[more]
Q10R47	1.6e-10	50.00	Transcription factor ILI3 OS=Oryza sativa subsp. japonica OX=39947 GN=ILI3 PE=3 ...	[more]
Q8GW32	2.1e-10	48.61	Transcription factor PRE6 OS=Arabidopsis thaliana OX=3702 GN=PRE6 PE=1 SV=1	[more]
F4JCN9	4.7e-10	49.32	Transcription factor PRE4 OS=Arabidopsis thaliana OX=3702 GN=PRE4 PE=1 SV=1	[more]
Q9CA64	1.8e-09	43.06	Transcription factor PRE3 OS=Arabidopsis thaliana OX=3702 GN=PRE3 PE=1 SV=1	[more]

BLAST of Sed0026086 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQ05	1.8e-20	67.06	DNA binding protein OS=Cucumis sativus OX=3659 GN=Csa_1G032990 PE=4 SV=1	[more]
A0A5A7SZP9	2.6e-19	62.79	Transcription factor PRE5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A1S3B0J1	2.6e-19	62.79	transcription factor PRE5-like OS=Cucumis melo OX=3656 GN=LOC103484708 PE=4 SV=1	[more]
A0A5D3BKI2	8.4e-18	63.75	Transcription factor PRE5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A438BUK7	6.9e-12	51.76	Transcription factor PRE5 OS=Vitis vinifera OX=29760 GN=PRE5_1 PE=4 SV=1	[more]

BLAST of Sed0026086 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26945.1	1.5e-11	48.61	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G47710.1	3.4e-11	49.32	BANQUO 3	[more]
AT1G74500.1	1.3e-10	43.06	activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1	[more]
AT3G28857.1	3.7e-10	43.66	basic helix-loop-helix (bHLH) DNA-binding family protein	[more]
AT5G15160.1	4.9e-10	40.28	BANQUO 2	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 44..64
None	No IPR available	PANTHER	PTHR38546:SF3	DNA BINDING PROTEIN	coord: 3..85
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 8..74 e-value: 2.4E-7 score: 32.8
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 10..69
IPR044172	Transcription factor ILI2-like	PANTHER	PTHR38546	DNA BINDING PROTEIN	coord: 3..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0026086.1	Sed0026086.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity