Homology
BLAST of Sed0025996 vs. NCBI nr
Match:
KAG6588362.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1285.8 bits (3326), Expect = 0.0e+00
Identity = 621/711 (87.34%), Postives = 665/711 (93.53%), Query Frame = 0
Query: 1 MPMLKL--PITGLAPVKFTPFLFTSNYLPSPLLDLIKLLKLAADAKNLKFGRIIHAHLII 60
M MLKL PI+ LAPVKFTPFL SN L SPLLD +KLLK+AADAKNLKFGR IHAHLII
Sbjct: 1 MAMLKLPVPISSLAPVKFTPFLSKSNDLASPLLDPMKLLKVAADAKNLKFGRTIHAHLII 60
Query: 61 TNHIHRDCRVNHMNSLINLYVKCDELLVAREMFDRMSRRNVVSWCALMAGYMKNGSPLEV 120
TN + DCRVN +NSLINLYVKCDEL +AR+MFDRMS+RNVVSWCALMAGYM+NGSPLEV
Sbjct: 61 TNRLPGDCRVNQINSLINLYVKCDELFIARQMFDRMSKRNVVSWCALMAGYMQNGSPLEV 120
Query: 121 FGLFKNMVVKDNIFPNEYVISVVVSSCCDGQMYVEGKQCHGFALKSGLELHQYVKNALIQ 180
F LFK M+VKDNIFPNEYVI+ V+SSC D QMYVEG+QCHGF+LKSGLELHQYVKNALIQ
Sbjct: 121 FELFKKMIVKDNIFPNEYVIATVISSCRDSQMYVEGRQCHGFSLKSGLELHQYVKNALIQ 180
Query: 181 MYSKCSDVRAALQILDTVPGYDIFCYNLVLKGLLEHSHIREAIEVLELIIGEGIEWNNAT 240
MYSKCSDVRAAL+ILDTVPGYDIFCYNLVL GLLEHSH+REAIEVL+L+IGEG +WNNAT
Sbjct: 181 MYSKCSDVRAALKILDTVPGYDIFCYNLVLNGLLEHSHVREAIEVLKLMIGEGTKWNNAT 240
Query: 241 YVTIFHLCATLKDLKLGKQVHAQMLKSDIDYDVYIGSSIIDMYGKCGNVLGGRAFFDQLQ 300
+VTIF +CA+LKDLK GK VHA+MLKSDIDYDVYIGSSIIDMYGKCGNVL GRAFFDQLQ
Sbjct: 241 FVTIFRICASLKDLKFGKHVHARMLKSDIDYDVYIGSSIIDMYGKCGNVLSGRAFFDQLQ 300
Query: 301 SQNVVSWTAIMAAYLQNGFFEEALNLLSKMEADHIPPNEYTLAVLLNSAAGLSAKCHGEQ 360
++NVVSWTAIMAAY QNGFFEEALNL SKME DHIPPNEYTLAVLLNSAAGLSA HG+Q
Sbjct: 301 NRNVVSWTAIMAAYFQNGFFEEALNLFSKMEIDHIPPNEYTLAVLLNSAAGLSALSHGDQ 360
Query: 361 LHARAEKSGLKGNIIVGNALIIMYAKSGDILAAQHLFSNMKCCDSVTWNAIITGYSHHGL 420
LHARAEKSGLKGN+IVGNALIIMY+KSGDILAAQ +FSNMKCCDS+TWNAIITG+SHH +
Sbjct: 361 LHARAEKSGLKGNVIVGNALIIMYSKSGDILAAQRVFSNMKCCDSITWNAIITGHSHHCI 420
Query: 421 GKEALSMFWDMLTARECPNYVTFIGVLSACAHLSRVDEGYYYFNHLMKHFGIVPGLEHYT 480
GKEAL++F DMLTARECPNYVTFIGVLSACAHLS VDEG YYFNHLMK FGIVPGLEHYT
Sbjct: 421 GKEALNIFHDMLTARECPNYVTFIGVLSACAHLSLVDEGLYYFNHLMKQFGIVPGLEHYT 480
Query: 481 CIVGLLSRSGRLDEAENFMRSNPINWDVVAWRTLLNACYIHRNYDKGKQIADYLLQMDHE 540
CIVGLLSRSGRLDEAENFMRSNPINWDVVAWRTLLNACY+HRNYDKGKQIA+YLLQMDHE
Sbjct: 481 CIVGLLSRSGRLDEAENFMRSNPINWDVVAWRTLLNACYVHRNYDKGKQIAEYLLQMDHE 540
Query: 541 DVGTYILLSNMHARVRRWDGVVKIRKLMRERNVKKEPGVSWLEIRNIAHVFTSEDNKHSE 600
DVG+YILLSNMHARVRRWDGVVK+RKLMRERNVKKEPGVSWLEIRNIAHVFTSEDNKH E
Sbjct: 541 DVGSYILLSNMHARVRRWDGVVKVRKLMRERNVKKEPGVSWLEIRNIAHVFTSEDNKHPE 600
Query: 601 SRQIYKKVRDLLSKIQLLGYVPDIAGVLHDIEDEQKLENLSYHSEKLAVAYGLMKTPSGA 660
S QIY+ VRDLL+KI+ LGY+PDIAGVLHDIEDEQKL NLSYHSEKLAVAYGLMK+PSGA
Sbjct: 601 SSQIYEMVRDLLAKIRPLGYIPDIAGVLHDIEDEQKLNNLSYHSEKLAVAYGLMKSPSGA 660
Query: 661 PIRVIKNLRMCYDCHTAIKLISKVENRVIIVRDANRFHHFQDGVCSCGDYW 710
PIRVIKNLRMC DCHTAIKLISK+ NR IIVRDANRFHHFQDG CSCGDYW
Sbjct: 661 PIRVIKNLRMCDDCHTAIKLISKLANRTIIVRDANRFHHFQDGFCSCGDYW 711
BLAST of Sed0025996 vs. NCBI nr
Match:
XP_022933883.1 (pentatricopeptide repeat-containing protein At5g39680 [Cucurbita moschata])
HSP 1 Score: 1284.6 bits (3323), Expect = 0.0e+00
Identity = 621/711 (87.34%), Postives = 665/711 (93.53%), Query Frame = 0
Query: 1 MPMLKL--PITGLAPVKFTPFLFTSNYLPSPLLDLIKLLKLAADAKNLKFGRIIHAHLII 60
M MLKL PI+ LAPVKFTPFL SN L SPLLD +KLLK+AADAKNLKFGR IHAHLII
Sbjct: 1 MAMLKLPVPISSLAPVKFTPFLSKSNDLASPLLDPMKLLKVAADAKNLKFGRTIHAHLII 60
Query: 61 TNHIHRDCRVNHMNSLINLYVKCDELLVAREMFDRMSRRNVVSWCALMAGYMKNGSPLEV 120
TN + DCRVN +NSLINLYVKCDEL +AR+MFDRMS+RNVVSWCALMAGYM+NGSPLEV
Sbjct: 61 TNRLPGDCRVNQINSLINLYVKCDELFIARQMFDRMSKRNVVSWCALMAGYMQNGSPLEV 120
Query: 121 FGLFKNMVVKDNIFPNEYVISVVVSSCCDGQMYVEGKQCHGFALKSGLELHQYVKNALIQ 180
F LFK M+VKDNIFPNEYVI+ V+SSC D QMYVEG+QCHGF+LKSGLELHQYVKNALIQ
Sbjct: 121 FELFKKMIVKDNIFPNEYVIATVISSCRDSQMYVEGRQCHGFSLKSGLELHQYVKNALIQ 180
Query: 181 MYSKCSDVRAALQILDTVPGYDIFCYNLVLKGLLEHSHIREAIEVLELIIGEGIEWNNAT 240
MYSKCSDVRAAL+ILDTVPGYD+FCYNLVL GLLEHSH+REAIEVL+L+IGEG +WNNAT
Sbjct: 181 MYSKCSDVRAALKILDTVPGYDVFCYNLVLNGLLEHSHVREAIEVLKLMIGEGTKWNNAT 240
Query: 241 YVTIFHLCATLKDLKLGKQVHAQMLKSDIDYDVYIGSSIIDMYGKCGNVLGGRAFFDQLQ 300
+VTIF +CA+LKDLK GK VHA+MLKSDIDYDVYIGSSIIDMYGKCGNVL GRAFFDQLQ
Sbjct: 241 FVTIFRICASLKDLKFGKHVHARMLKSDIDYDVYIGSSIIDMYGKCGNVLSGRAFFDQLQ 300
Query: 301 SQNVVSWTAIMAAYLQNGFFEEALNLLSKMEADHIPPNEYTLAVLLNSAAGLSAKCHGEQ 360
++NVVSWTAIMAAY QNGFFEEALNL SKME DHIPPNEYTLAVLLNSAAGLSA HG+Q
Sbjct: 301 NRNVVSWTAIMAAYFQNGFFEEALNLFSKMEIDHIPPNEYTLAVLLNSAAGLSALSHGDQ 360
Query: 361 LHARAEKSGLKGNIIVGNALIIMYAKSGDILAAQHLFSNMKCCDSVTWNAIITGYSHHGL 420
LHARAEKSGLKGN+IVGNALIIMY+KSGDILAAQ +FSNMKCCDS+TWNAIITG+SHH +
Sbjct: 361 LHARAEKSGLKGNVIVGNALIIMYSKSGDILAAQCVFSNMKCCDSITWNAIITGHSHHCI 420
Query: 421 GKEALSMFWDMLTARECPNYVTFIGVLSACAHLSRVDEGYYYFNHLMKHFGIVPGLEHYT 480
GKEAL++F DMLTARECPNYVTFIGVLSACAHLS VDEG YYFNHLMK FGIVPGLEHYT
Sbjct: 421 GKEALNIFHDMLTARECPNYVTFIGVLSACAHLSLVDEGLYYFNHLMKQFGIVPGLEHYT 480
Query: 481 CIVGLLSRSGRLDEAENFMRSNPINWDVVAWRTLLNACYIHRNYDKGKQIADYLLQMDHE 540
CIVGLLSRSGRLDEAENFMRSNPINWDVVAWRTLLNACY+HRNYDKGKQIA+YLLQMDHE
Sbjct: 481 CIVGLLSRSGRLDEAENFMRSNPINWDVVAWRTLLNACYVHRNYDKGKQIAEYLLQMDHE 540
Query: 541 DVGTYILLSNMHARVRRWDGVVKIRKLMRERNVKKEPGVSWLEIRNIAHVFTSEDNKHSE 600
DVG+YILLSNMHARVRRWDGVVK+RKLMRERNVKKEPGVSWLEIRNIAHVFTSEDNKH E
Sbjct: 541 DVGSYILLSNMHARVRRWDGVVKVRKLMRERNVKKEPGVSWLEIRNIAHVFTSEDNKHPE 600
Query: 601 SRQIYKKVRDLLSKIQLLGYVPDIAGVLHDIEDEQKLENLSYHSEKLAVAYGLMKTPSGA 660
S QIY+ VRDLL+KI+ LGYVPDIAGVLHDIEDEQKL+NLSYHSEKLAVAYGLMK PSGA
Sbjct: 601 SSQIYEMVRDLLTKIRPLGYVPDIAGVLHDIEDEQKLDNLSYHSEKLAVAYGLMKLPSGA 660
Query: 661 PIRVIKNLRMCYDCHTAIKLISKVENRVIIVRDANRFHHFQDGVCSCGDYW 710
PIRVIKNLRMC DCHTAIKLISK+ NR IIVRDANRFHHFQDG CSCGDYW
Sbjct: 661 PIRVIKNLRMCDDCHTAIKLISKLANRTIIVRDANRFHHFQDGFCSCGDYW 711
BLAST of Sed0025996 vs. NCBI nr
Match:
XP_023002421.1 (pentatricopeptide repeat-containing protein At5g39680 [Cucurbita maxima] >XP_023002429.1 pentatricopeptide repeat-containing protein At5g39680 [Cucurbita maxima])
HSP 1 Score: 1280.8 bits (3313), Expect = 0.0e+00
Identity = 618/711 (86.92%), Postives = 665/711 (93.53%), Query Frame = 0
Query: 1 MPMLKL--PITGLAPVKFTPFLFTSNYLPSPLLDLIKLLKLAADAKNLKFGRIIHAHLII 60
M MLKL PI+ LAPVKFTPFL SN L SPLLD +KLLK+AADAKNLKFGR+IHAHL+I
Sbjct: 28 MAMLKLPVPISSLAPVKFTPFLSKSNELASPLLDPMKLLKVAADAKNLKFGRVIHAHLVI 87
Query: 61 TNHIHRDCRVNHMNSLINLYVKCDELLVAREMFDRMSRRNVVSWCALMAGYMKNGSPLEV 120
TN I RDCRVN +NSLINLYVKCDEL +AR+MFDRMS+RNVVSWCALMAGYM+NGSPL+V
Sbjct: 88 TNRIPRDCRVNQINSLINLYVKCDELFIARQMFDRMSKRNVVSWCALMAGYMQNGSPLDV 147
Query: 121 FGLFKNMVVKDNIFPNEYVISVVVSSCCDGQMYVEGKQCHGFALKSGLELHQYVKNALIQ 180
F LFK M+VKDNIFPNEYVI+ V+SSC D QMYVEGKQCHGF+LKSGLELHQYVKNALIQ
Sbjct: 148 FELFKKMIVKDNIFPNEYVIATVISSCFDSQMYVEGKQCHGFSLKSGLELHQYVKNALIQ 207
Query: 181 MYSKCSDVRAALQILDTVPGYDIFCYNLVLKGLLEHSHIREAIEVLELIIGEGIEWNNAT 240
MYSKCSDVRAAL+ILDTVPGYD+FCYNLVL GLLEHSH+ EAIEVL+L+I EG +WNNAT
Sbjct: 208 MYSKCSDVRAALKILDTVPGYDVFCYNLVLNGLLEHSHVGEAIEVLKLMIDEGTKWNNAT 267
Query: 241 YVTIFHLCATLKDLKLGKQVHAQMLKSDIDYDVYIGSSIIDMYGKCGNVLGGRAFFDQLQ 300
+VTIF +CA+LKDLKLGK VHA+MLKSDID DVYIGSSIIDMYGKCGNVL GRAFFDQLQ
Sbjct: 268 FVTIFRICASLKDLKLGKHVHARMLKSDIDDDVYIGSSIIDMYGKCGNVLSGRAFFDQLQ 327
Query: 301 SQNVVSWTAIMAAYLQNGFFEEALNLLSKMEADHIPPNEYTLAVLLNSAAGLSAKCHGEQ 360
++NVVSWTAIMAAY QNGFFEEALNL SKME DHIPPNEYTLAVLLNSAAGLSA HG+Q
Sbjct: 328 NRNVVSWTAIMAAYFQNGFFEEALNLFSKMEIDHIPPNEYTLAVLLNSAAGLSALSHGDQ 387
Query: 361 LHARAEKSGLKGNIIVGNALIIMYAKSGDILAAQHLFSNMKCCDSVTWNAIITGYSHHGL 420
LHARAEKSGLKGN+IVGNALIIMY+KSGDILAAQ +FSNMKCCDS+TWNAIITG+SHH +
Sbjct: 388 LHARAEKSGLKGNVIVGNALIIMYSKSGDILAAQLVFSNMKCCDSITWNAIITGHSHHCI 447
Query: 421 GKEALSMFWDMLTARECPNYVTFIGVLSACAHLSRVDEGYYYFNHLMKHFGIVPGLEHYT 480
GKEAL++F DMLTARECPNYVTFIGVLSACAHLS VDEG YYFNHLMK GIVPGLEHYT
Sbjct: 448 GKEALNIFHDMLTARECPNYVTFIGVLSACAHLSLVDEGLYYFNHLMKQLGIVPGLEHYT 507
Query: 481 CIVGLLSRSGRLDEAENFMRSNPINWDVVAWRTLLNACYIHRNYDKGKQIADYLLQMDHE 540
CIVGLLSRSGRLDEAENFMRSNPINWDVVAWRTLLNACY+HRNYDKGKQIA+YLLQMDHE
Sbjct: 508 CIVGLLSRSGRLDEAENFMRSNPINWDVVAWRTLLNACYVHRNYDKGKQIAEYLLQMDHE 567
Query: 541 DVGTYILLSNMHARVRRWDGVVKIRKLMRERNVKKEPGVSWLEIRNIAHVFTSEDNKHSE 600
DVG+YILLSNMHARVRRWDGVVK+RKLMRERNVKKEPGVSWLEIRNIAHVFTSEDNKH E
Sbjct: 568 DVGSYILLSNMHARVRRWDGVVKVRKLMRERNVKKEPGVSWLEIRNIAHVFTSEDNKHPE 627
Query: 601 SRQIYKKVRDLLSKIQLLGYVPDIAGVLHDIEDEQKLENLSYHSEKLAVAYGLMKTPSGA 660
S QIY+ +RDLL+KI+ LGYVPDIAGVLHDIEDEQK++NLSYHSEKLAVAYGLMK+PSGA
Sbjct: 628 SSQIYEMIRDLLTKIRPLGYVPDIAGVLHDIEDEQKIDNLSYHSEKLAVAYGLMKSPSGA 687
Query: 661 PIRVIKNLRMCYDCHTAIKLISKVENRVIIVRDANRFHHFQDGVCSCGDYW 710
PIRVIKNLRMC DCHTAIKLISKV NR IIVRDANRFHHFQDG CSCGDYW
Sbjct: 688 PIRVIKNLRMCDDCHTAIKLISKVANRTIIVRDANRFHHFQDGFCSCGDYW 738
BLAST of Sed0025996 vs. NCBI nr
Match:
XP_023529544.1 (pentatricopeptide repeat-containing protein At5g39680 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1277.3 bits (3304), Expect = 0.0e+00
Identity = 617/711 (86.78%), Postives = 663/711 (93.25%), Query Frame = 0
Query: 1 MPMLKL--PITGLAPVKFTPFLFTSNYLPSPLLDLIKLLKLAADAKNLKFGRIIHAHLII 60
M MLKL PI+ LAPVKFTPFL SN L SPLLD +KLLK+AADAKNLKFGR IHAHLII
Sbjct: 1 MAMLKLPVPISSLAPVKFTPFLSKSNELASPLLDPMKLLKVAADAKNLKFGRTIHAHLII 60
Query: 61 TNHIHRDCRVNHMNSLINLYVKCDELLVAREMFDRMSRRNVVSWCALMAGYMKNGSPLEV 120
TN + DCRVN +NSLINLYVKCDEL +AR+MFDRMS+RNVVSWCALMAGYM+NGSPL V
Sbjct: 61 TNRLPGDCRVNQINSLINLYVKCDELFIARQMFDRMSKRNVVSWCALMAGYMQNGSPLVV 120
Query: 121 FGLFKNMVVKDNIFPNEYVISVVVSSCCDGQMYVEGKQCHGFALKSGLELHQYVKNALIQ 180
F LFK M+VKDNIFPNEYVI+ V+SSC D QMYVEG+QCHGF+LKSGLELHQYVKNALIQ
Sbjct: 121 FELFKKMIVKDNIFPNEYVIATVISSCRDSQMYVEGRQCHGFSLKSGLELHQYVKNALIQ 180
Query: 181 MYSKCSDVRAALQILDTVPGYDIFCYNLVLKGLLEHSHIREAIEVLELIIGEGIEWNNAT 240
MYSKCSDVRAAL+ILDTVPGYD+FCYNLVL GLLEHSH+REAIEVL+L+I EG +WNNAT
Sbjct: 181 MYSKCSDVRAALKILDTVPGYDVFCYNLVLNGLLEHSHLREAIEVLKLMIDEGTKWNNAT 240
Query: 241 YVTIFHLCATLKDLKLGKQVHAQMLKSDIDYDVYIGSSIIDMYGKCGNVLGGRAFFDQLQ 300
+VTIF +CA+LKDL+ GK VHA+MLKSDIDYDVYIGSSIIDMYGKCGNVL GRAFFDQLQ
Sbjct: 241 FVTIFRICASLKDLQFGKHVHARMLKSDIDYDVYIGSSIIDMYGKCGNVLSGRAFFDQLQ 300
Query: 301 SQNVVSWTAIMAAYLQNGFFEEALNLLSKMEADHIPPNEYTLAVLLNSAAGLSAKCHGEQ 360
++NVVSWTAIMAAY QNGFFEEALNL SKME DHIPPNEYTLAVLLNSAAGLSA HG+Q
Sbjct: 301 NRNVVSWTAIMAAYFQNGFFEEALNLFSKMEIDHIPPNEYTLAVLLNSAAGLSALSHGDQ 360
Query: 361 LHARAEKSGLKGNIIVGNALIIMYAKSGDILAAQHLFSNMKCCDSVTWNAIITGYSHHGL 420
LHARAEKSGLKGN+IVGNALIIMY+KSGDILAAQ +FSNM CCDS+TWNAIITG+SHH +
Sbjct: 361 LHARAEKSGLKGNVIVGNALIIMYSKSGDILAAQRVFSNMMCCDSITWNAIITGHSHHCI 420
Query: 421 GKEALSMFWDMLTARECPNYVTFIGVLSACAHLSRVDEGYYYFNHLMKHFGIVPGLEHYT 480
GKEAL++F DMLTARECPNYVTFIGVLSACAHLS VDEG YYFNHLMK FGIVPGLEHYT
Sbjct: 421 GKEALNIFHDMLTARECPNYVTFIGVLSACAHLSLVDEGLYYFNHLMKQFGIVPGLEHYT 480
Query: 481 CIVGLLSRSGRLDEAENFMRSNPINWDVVAWRTLLNACYIHRNYDKGKQIADYLLQMDHE 540
CIVGLLSRSGRLDEAENFMRSNPINWDVVAWRTLLNACY+HRNYDKGKQIA+YLLQMDHE
Sbjct: 481 CIVGLLSRSGRLDEAENFMRSNPINWDVVAWRTLLNACYVHRNYDKGKQIAEYLLQMDHE 540
Query: 541 DVGTYILLSNMHARVRRWDGVVKIRKLMRERNVKKEPGVSWLEIRNIAHVFTSEDNKHSE 600
DVG+YILLSNMHARVRRWDGVVK+RKLMRERNVKKEPGVSWLEIRNIAHVFTSEDNKH E
Sbjct: 541 DVGSYILLSNMHARVRRWDGVVKVRKLMRERNVKKEPGVSWLEIRNIAHVFTSEDNKHPE 600
Query: 601 SRQIYKKVRDLLSKIQLLGYVPDIAGVLHDIEDEQKLENLSYHSEKLAVAYGLMKTPSGA 660
S QIY+ VRDLL+KI+ LGYVPDIAGVLHDIEDEQKL+NLSYHSEKLAVAYGLMK+PSGA
Sbjct: 601 SSQIYEMVRDLLTKIRPLGYVPDIAGVLHDIEDEQKLDNLSYHSEKLAVAYGLMKSPSGA 660
Query: 661 PIRVIKNLRMCYDCHTAIKLISKVENRVIIVRDANRFHHFQDGVCSCGDYW 710
PIRVIKNLRMC DCHTAIKLISK+ NR IIVRDANRFHHFQDG CSCGDYW
Sbjct: 661 PIRVIKNLRMCDDCHTAIKLISKLANRTIIVRDANRFHHFQDGFCSCGDYW 711
BLAST of Sed0025996 vs. NCBI nr
Match:
KAG7022211.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1263.8 bits (3269), Expect = 0.0e+00
Identity = 613/702 (87.32%), Postives = 658/702 (93.73%), Query Frame = 0
Query: 1 MPMLKL--PITGLAPVKFTPFLFTSNYLPSPLLDLIKLLKLAADAKNLKFGRIIHAHLII 60
M MLKL PI+ LAPVKFTPFL SN L SPLLD +KLLK+AADAKNLKFGR IHAHLII
Sbjct: 1 MAMLKLPVPISSLAPVKFTPFLSKSNDLASPLLDPMKLLKVAADAKNLKFGRTIHAHLII 60
Query: 61 TNHIHRDCRVNHMNSLINLYVKCDELLVAREMFDRMSRRNVVSWCALMAGYMKNGSPLEV 120
TN + DCRVN +NSLINLYVKCDEL +AR+MFDRMS+RNVVSWCALMAGYM+NGSPLEV
Sbjct: 61 TNRLPGDCRVNQINSLINLYVKCDELFIARQMFDRMSKRNVVSWCALMAGYMQNGSPLEV 120
Query: 121 FGLFKNMVVKDNIFPNEYVISVVVSSCCDGQMYVEGKQCHGFALKSGLELHQYVKNALIQ 180
F LFK M+VKDNIFPNEYVI+ V+SSC D QMYVEG+QCHGF+LKSGLELHQYVKNALIQ
Sbjct: 121 FELFKKMIVKDNIFPNEYVIATVISSCRDSQMYVEGRQCHGFSLKSGLELHQYVKNALIQ 180
Query: 181 MYSKCSDVRAALQILDTVPGYDIFCYNLVLKGLLEHSHIREAIEVLELIIGEGIEWNNAT 240
MYSKCSDVRAAL+ILDTVPGYDIFCYNLVL GLLEHSH+REAIEVL+L+IGEG +WNNAT
Sbjct: 181 MYSKCSDVRAALKILDTVPGYDIFCYNLVLNGLLEHSHVREAIEVLKLMIGEGTKWNNAT 240
Query: 241 YVTIFHLCATLKDLKLGKQVHAQMLKSDIDYDVYIGSSIIDMYGKCGNVLGGRAFFDQLQ 300
+VTIF +CA+LKDLK GK VHA+MLKSDIDYDVYIGSSIIDMYGKCGNVL GRAFFDQLQ
Sbjct: 241 FVTIFRICASLKDLKFGKHVHARMLKSDIDYDVYIGSSIIDMYGKCGNVLSGRAFFDQLQ 300
Query: 301 SQNVVSWTAIMAAYLQNGFFEEALNLLSKMEADHIPPNEYTLAVLLNSAAGLSAKCHGEQ 360
++NVVSWTAIMAAY QNGFFEEALNL SKME DHIPPNEYTLAVLLNSAAGLSA HG+Q
Sbjct: 301 NRNVVSWTAIMAAYFQNGFFEEALNLFSKMEIDHIPPNEYTLAVLLNSAAGLSALSHGDQ 360
Query: 361 LHARAEKSGLKGNIIVGNALIIMYAKSGDILAAQHLFSNMKCCDSVTWNAIITGYSHHGL 420
LHARAEKSGLKGN+IVGNALIIMY+KSGDILAAQ +FSNMKCCDS+TWNAIITG+SHH +
Sbjct: 361 LHARAEKSGLKGNVIVGNALIIMYSKSGDILAAQRVFSNMKCCDSITWNAIITGHSHHCI 420
Query: 421 GKEALSMFWDMLTARECPNYVTFIGVLSACAHLSRVDEGYYYFNHLMKHFGIVPGLEHYT 480
GKEAL++F DMLTARECPNYVTFIGVLSACAHLS VDEG YYFNHLMK FGIVPGLEHYT
Sbjct: 421 GKEALNIFHDMLTARECPNYVTFIGVLSACAHLSLVDEGLYYFNHLMKQFGIVPGLEHYT 480
Query: 481 CIVGLLSRSGRLDEAENFMRSNPINWDVVAWRTLLNACYIHRNYDKGKQIADYLLQMDHE 540
CIVGLLSRSGRLDEAENFMRSNPINWDVVAWRTLLNACY+HRNYDKGKQIA+YLLQMDHE
Sbjct: 481 CIVGLLSRSGRLDEAENFMRSNPINWDVVAWRTLLNACYVHRNYDKGKQIAEYLLQMDHE 540
Query: 541 DVGTYILLSNMHARVRRWDGVVKIRKLMRERNVKKEPGVSWLEIRNIAHVFTSEDNKHSE 600
DVG+YILLSNMHARVRRWDGVVK+RKLMRERNVKKEPGVSWLEIRNIAHVFTSEDNKH E
Sbjct: 541 DVGSYILLSNMHARVRRWDGVVKVRKLMRERNVKKEPGVSWLEIRNIAHVFTSEDNKHPE 600
Query: 601 SRQIYKKVRDLLSKIQLLGYVPDIAGVLHDIEDEQKLENLSYHSEKLAVAYGLMKTPSGA 660
S QIY+ VRDLL+KI+ LGY+PDIAGVLHDIEDEQKL+NLSYHSEKLAVAYGLMK+PSGA
Sbjct: 601 SSQIYEMVRDLLAKIRPLGYIPDIAGVLHDIEDEQKLDNLSYHSEKLAVAYGLMKSPSGA 660
Query: 661 PIRVIKNLRMCYDCHTAIKLISKVENRVIIVRDANRFHHFQD 701
PIRVIKNLRMC DCHTAIKLISK+ NR IIVRDANRFHHFQD
Sbjct: 661 PIRVIKNLRMCDDCHTAIKLISKLANRTIIVRDANRFHHFQD 702
BLAST of Sed0025996 vs. ExPASy Swiss-Prot
Match:
Q9FK93 (Pentatricopeptide repeat-containing protein At5g39680 OS=Arabidopsis thaliana OX=3702 GN=EMB2744 PE=1 SV=1)
HSP 1 Score: 744.2 bits (1920), Expect = 1.4e-213
Identity = 360/687 (52.40%), Postives = 471/687 (68.56%), Query Frame = 0
Query: 23 SNYLPSPLLDLIKLLKLAADAKNLKFGRIIHAHLIITNHIHRDCRVNHMNSLINLYVKCD 82
S P P+ L +LLK+ A++ L+ G IHAHLI+TN R +NSLINLYVKC
Sbjct: 24 SKKTPFPIDRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCR 83
Query: 83 ELLVAREMFDRMSRRNVVSWCALMAGYMKNGSPLEVFGLFKNMVVKDNIFPNEYVISVVV 142
E + AR++FD M RNVVSWCA+M GY +G EV LFK+M PNE+V +VV
Sbjct: 84 ETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVF 143
Query: 143 SSCCDGQMYVEGKQCHGFALKSGLELHQYVKNALIQMYSKCSDVRAALQILDTVPGYDIF 202
SC + EGKQ HG LK GL H++V+N L+ MYS CS A+++LD +P D+
Sbjct: 144 KSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLS 203
Query: 203 CYNLVLKGLLEHSHIREAIEVLELIIGEGIEWNNATYVTIFHLCATLKDLKLGKQVHAQM 262
++ L G LE +E ++VL E WNN TY++ L + L+DL L QVH++M
Sbjct: 204 VFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRM 263
Query: 263 LKSDIDYDVYIGSSIIDMYGKCGNVLGGRAFFDQLQSQNVVSWTAIMAAYLQNGFFEEAL 322
++ + +V ++I+MYGKCG VL + FD +QN+ T IM AY Q+ FEEAL
Sbjct: 264 VRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEAL 323
Query: 323 NLLSKMEADHIPPNEYTLAVLLNSAAGLSAKCHGEQLHARAEKSGLKGNIIVGNALIIMY 382
NL SKM+ +PPNEYT A+LLNS A LS G+ LH KSG + +++VGNAL+ MY
Sbjct: 324 NLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMY 383
Query: 383 AKSGDILAAQHLFSNMKCCDSVTWNAIITGYSHHGLGKEALSMFWDMLTARECPNYVTFI 442
AKSG I A+ FS M D VTWN +I+G SHHGLG+EAL F M+ E PN +TFI
Sbjct: 384 AKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFI 443
Query: 443 GVLSACAHLSRVDEGYYYFNHLMKHFGIVPGLEHYTCIVGLLSRSGRLDEAENFMRSNPI 502
GVL AC+H+ V++G +YFN LMK F + P ++HYTCIVGLLS++G +AE+FMR+ PI
Sbjct: 444 GVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPI 503
Query: 503 NWDVVAWRTLLNACYIHRNYDKGKQIADYLLQMDHEDVGTYILLSNMHARVRRWDGVVKI 562
WDVVAWRTLLNACY+ RNY GK++A+Y ++ D G Y+LLSN+HA+ R W+GV K+
Sbjct: 504 EWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKV 563
Query: 563 RKLMRERNVKKEPGVSWLEIRNIAHVFTSEDNKHSESRQIYKKVRDLLSKIQLLGYVPDI 622
R LM R VKKEPGVSW+ IRN HVF +EDN+H E IY KV++++SKI+ LGY PD+
Sbjct: 564 RSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDV 623
Query: 623 AGVLHDIEDEQKLENLSYHSEKLAVAYGLMKTPSGAPIRVIKNLRMCYDCHTAIKLISKV 682
AG HD+++EQ+ +NLSYHSEKLAVAYGL+KTP +P+ V KN+R+C DCH+AIKLISK+
Sbjct: 624 AGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKI 683
Query: 683 ENRVIIVRDANRFHHFQDGVCSCGDYW 710
R I++RD+NRFHHF DG CSC DYW
Sbjct: 684 SKRYIVIRDSNRFHHFLDGQCSCCDYW 710
BLAST of Sed0025996 vs. ExPASy Swiss-Prot
Match:
Q9SMZ2 (Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H53 PE=3 SV=1)
HSP 1 Score: 491.5 bits (1264), Expect = 1.6e-137
Identity = 257/679 (37.85%), Postives = 401/679 (59.06%), Query Frame = 0
Query: 34 IKLLKLAADAKNLKFGRIIHAHLIITNHIHRDCRVNHMNSLINLYVKCDELLVAREMFDR 93
I +L A +L G+ +H + + D + NSLIN+Y K + AR +FD
Sbjct: 319 ILMLATAVKVDSLALGQQVHCMAL---KLGLDLMLTVSNSLINMYCKLRKFGFARTVFDN 378
Query: 94 MSRRNVVSWCALMAGYMKNGSPLEVFGLFKNMVVKDNIFPNEYVISVVV---SSCCDGQM 153
MS R+++SW +++AG +NG +E LF + ++ + P++Y ++ V+ SS +G
Sbjct: 379 MSERDLISWNSVIAGIAQNGLEVEAVCLFMQL-LRCGLKPDQYTMTSVLKAASSLPEGLS 438
Query: 154 YVEGKQCHGFALKSGLELHQYVKNALIQMYSKCSDVRAALQILDTVPGYDIFCYNLVLKG 213
KQ H A+K +V ALI YS+ ++ A +IL +D+ +N ++ G
Sbjct: 439 L--SKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEA-EILFERHNFDLVAWNAMMAG 498
Query: 214 LLEHSHIREAIEVLELIIGEGIEWNNATYVTIFHLCATLKDLKLGKQVHAQMLKSDIDYD 273
+ + +++ L+ +G ++ T T+F C L + GKQVHA +KS D D
Sbjct: 499 YTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLD 558
Query: 274 VYIGSSIIDMYGKCGNVLGGRAFFDQLQSQNVVSWTAIMAAYLQNGFFEEALNLLSKMEA 333
+++ S I+DMY KCG++ + FD + + V+WT +++ ++NG E A ++ S+M
Sbjct: 559 LWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRL 618
Query: 334 DHIPPNEYTLAVLLNSAAGLSAKCHGEQLHARAEKSGLKGNIIVGNALIIMYAKSGDILA 393
+ P+E+T+A L +++ L+A G Q+HA A K + VG +L+ MYAK G I
Sbjct: 619 MGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDD 678
Query: 394 AQHLFSNMKCCDSVTWNAIITGYSHHGLGKEALSMFWDMLTARECPNYVTFIGVLSACAH 453
A LF ++ + WNA++ G + HG GKE L +F M + P+ VTFIGVLSAC+H
Sbjct: 679 AYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSH 738
Query: 454 LSRVDEGYYYFNHLMKHFGIVPGLEHYTCIVGLLSRSGRLDEAENFMRSNPINWDVVAWR 513
V E Y + + +GI P +EHY+C+ L R+G + +AEN + S + +R
Sbjct: 739 SGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYR 798
Query: 514 TLLNACYIHRNYDKGKQIADYLLQMDHEDVGTYILLSNMHARVRRWDGVVKIRKLMRERN 573
TLL AC + + + GK++A LL+++ D Y+LLSNM+A +WD + R +M+
Sbjct: 799 TLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHK 858
Query: 574 VKKEPGVSWLEIRNIAHVFTSEDNKHSESRQIYKKVRDLLSKIQLLGYVPDIAGVLHDIE 633
VKK+PG SW+E++N H+F +D + ++ IY+KV+D++ I+ GYVP+ L D+E
Sbjct: 859 VKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVE 918
Query: 634 DEQKLENLSYHSEKLAVAYGLMKTPSGAPIRVIKNLRMCYDCHTAIKLISKVENRVIIVR 693
+E+K L YHSEKLAVA+GL+ TP PIRVIKNLR+C DCH A+K I+KV NR I++R
Sbjct: 919 EEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLR 978
Query: 694 DANRFHHFQDGVCSCGDYW 710
DANRFH F+DG+CSCGDYW
Sbjct: 979 DANRFHRFKDGICSCGDYW 990
BLAST of Sed0025996 vs. ExPASy Swiss-Prot
Match:
Q9ZUW3 (Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H60 PE=2 SV=1)
HSP 1 Score: 481.1 bits (1237), Expect = 2.2e-134
Identity = 249/664 (37.50%), Postives = 397/664 (59.79%), Query Frame = 0
Query: 49 GRIIHAHLIITNHIHRDCRVNHMNSLINLYVKCDELLVAREMFDRMSRRNVVSWCALMAG 108
GR + H ++ + D + NSLINLY+KC + AR +FD+ ++VV+W ++++G
Sbjct: 211 GRGLQVHTVVVKN-GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISG 270
Query: 109 YMKNGSPLEVFGLFKNMVVKDNIFPNEYVISVVVSSCCDGQMYVEGKQCHGFALKSGLEL 168
Y NG LE G+F +M + + + +E + V+ C + + +Q H +K G
Sbjct: 271 YAANGLDLEALGMFYSMRL-NYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLF 330
Query: 169 HQYVKNALIQMYSKCSDVRAALQILDTVPGY-DIFCYNLVLKGLLEHSHIREAIEVLELI 228
Q ++ AL+ YSKC+ + AL++ + ++ + ++ G L++ EA+++ +
Sbjct: 331 DQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEM 390
Query: 229 IGEGIEWNNATYVTIFHLCATLKDLKLGKQVHAQMLKSDIDYDVYIGSSIIDMYGKCGNV 288
+G+ N TY I + +VHAQ++K++ + +G++++D Y K G V
Sbjct: 391 KRKGVRPNEFTYSVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKV 450
Query: 289 LGGRAFFDQLQSQNVVSWTAIMAAYLQNGFFEEALNLLSKMEADHIPPNEYTLAVLLNSA 348
F + +++V+W+A++A Y Q G E A+ + ++ I PNE+T + +LN
Sbjct: 451 EEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVC 510
Query: 349 AGLSAKC-HGEQLHARAEKSGLKGNIIVGNALIIMYAKSGDILAAQHLFSNMKCCDSVTW 408
A +A G+Q H A KS L ++ V +AL+ MYAK G+I +A+ +F + D V+W
Sbjct: 511 AATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSW 570
Query: 409 NAIITGYSHHGLGKEALSMFWDMLTARECPNYVTFIGVLSACAHLSRVDEGYYYFNHLMK 468
N++I+GY+ HG +AL +F +M + + VTFIGV +AC H V+EG YF+ +++
Sbjct: 571 NSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVR 630
Query: 469 HFGIVPGLEHYTCIVGLLSRSGRLDEAENFMRSNPINWDVVAWRTLLNACYIHRNYDKGK 528
I P EH +C+V L SR+G+L++A + + P WRT+L AC +H+ + G+
Sbjct: 631 DCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGR 690
Query: 529 QIADYLLQMDHEDVGTYILLSNMHARVRRWDGVVKIRKLMRERNVKKEPGVSWLEIRNIA 588
A+ ++ M ED Y+LLSNM+A W K+RKLM ERNVKKEPG SW+E++N
Sbjct: 691 LAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKT 750
Query: 589 HVFTSEDNKHSESRQIYKKVRDLLSKIQLLGYVPDIAGVLHDIEDEQKLENLSYHSEKLA 648
+ F + D H QIY K+ DL ++++ LGY PD + VL DI+DE K L+ HSE+LA
Sbjct: 751 YSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLA 810
Query: 649 VAYGLMKTPSGAPIRVIKNLRMCYDCHTAIKLISKVENRVIIVRDANRFHHF-QDGVCSC 708
+A+GL+ TP G+P+ +IKNLR+C DCH IKLI+K+E R I+VRD+NRFHHF DGVCSC
Sbjct: 811 IAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSC 868
Query: 709 GDYW 710
GD+W
Sbjct: 871 GDFW 868
BLAST of Sed0025996 vs. ExPASy Swiss-Prot
Match:
Q9SHZ8 (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H41 PE=3 SV=1)
HSP 1 Score: 480.3 bits (1235), Expect = 3.7e-134
Identity = 250/704 (35.51%), Postives = 393/704 (55.82%), Query Frame = 0
Query: 72 NSLINLYVKCDELLVAREMFDRMSRRNVVSWCALMAGYMKNGSPLEVFGLFKNMVVKDNI 131
N++++ Y K ++ E FD++ +R+ VSW ++ GY G + + +M VK+ I
Sbjct: 84 NTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDM-VKEGI 143
Query: 132 FPNEYVISVVVSSCCDGQMYVEGKQCHGFALKSGLELHQYVKNALIQMYSKCSDVRAALQ 191
P ++ ++ V++S + GK+ H F +K GL + V N+L+ MY+KC D A
Sbjct: 144 EPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKF 203
Query: 192 ILD-------------------------------TVPGYDIFCYNLVLKGLLEHSHIREA 251
+ D + DI +N ++ G + + A
Sbjct: 204 VFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRA 263
Query: 252 IEVLELIIGEG-IEWNNATYVTIFHLCATLKDLKLGKQVHAQMLKSDIDYDVYIGSSIID 311
+++ ++ + + + T ++ CA L+ L +GKQ+H+ ++ + D + +++I
Sbjct: 264 LDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALIS 323
Query: 312 MYGKCGNVLGGRAFFDQ---------------------------------LQSQNVVSWT 371
MY +CG V R +Q L+ ++VV+WT
Sbjct: 324 MYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWT 383
Query: 372 AIMAAYLQNGFFEEALNLLSKMEADHIPPNEYTLAVLLNSAAGLSAKCHGEQLHARAEKS 431
A++ Y Q+G + EA+NL M PN YTLA +L+ A+ L++ HG+Q+H A KS
Sbjct: 384 AMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKS 443
Query: 432 GLKGNIIVGNALIIMYAKSGDILAAQHLFSNMKC-CDSVTWNAIITGYSHHGLGKEALSM 491
G ++ V NALI MYAK+G+I +A F ++C D+V+W ++I + HG +EAL +
Sbjct: 444 GEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALEL 503
Query: 492 FWDMLTARECPNYVTFIGVLSACAHLSRVDEGYYYFNHLMKHFGIVPGLEHYTCIVGLLS 551
F ML P+++T++GV SAC H V++G YF+ + I+P L HY C+V L
Sbjct: 504 FETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFG 563
Query: 552 RSGRLDEAENFMRSNPINWDVVAWRTLLNACYIHRNYDKGKQIADYLLQMDHEDVGTYIL 611
R+G L EA+ F+ PI DVV W +LL+AC +H+N D GK A+ LL ++ E+ G Y
Sbjct: 564 RAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSA 623
Query: 612 LSNMHARVRRWDGVVKIRKLMRERNVKKEPGVSWLEIRNIAHVFTSEDNKHSESRQIYKK 671
L+N+++ +W+ KIRK M++ VKKE G SW+E+++ HVF ED H E +IY
Sbjct: 624 LANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMT 683
Query: 672 VRDLLSKIQLLGYVPDIAGVLHDIEDEQKLENLSYHSEKLAVAYGLMKTPSGAPIRVIKN 710
++ + +I+ +GYVPD A VLHD+E+E K + L +HSEKLA+A+GL+ TP +R++KN
Sbjct: 684 MKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKN 743
BLAST of Sed0025996 vs. ExPASy Swiss-Prot
Match:
Q9SVP7 (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H42 PE=2 SV=2)
HSP 1 Score: 478.0 bits (1229), Expect = 1.8e-133
Identity = 236/637 (37.05%), Postives = 369/637 (57.93%), Query Frame = 0
Query: 73 SLINLYVKCDELLVAREMFDRMSRRNVVSWCALMAGYMKNGSPLEVFGLFKNMVVKDNIF 132
+L+NLY KC ++ A + F NVV W ++ Y F +F+ M +++ I
Sbjct: 429 ALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEE-IV 488
Query: 133 PNEYVISVVVSSCCDGQMYVEGKQCHGFALKSGLELHQYVKNALIQMYSKCSDVRAALQI 192
PN+Y ++ +C G+Q H +K+ +L+ YV + LI MY+K + A I
Sbjct: 489 PNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDI 548
Query: 193 LDTVPGYDIFCYNLVLKGLLEHSHIREAIEVLELIIGEGIEWNNATYVTIFHLCATLKDL 252
L G D+ + ++ G +++ +A+ ++ GI + CA L+ L
Sbjct: 549 LIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQAL 608
Query: 253 KLGKQVHAQMLKSDIDYDVYIGSSIIDMYGKCGNVLGGRAFFDQLQSQNVVSWTAIMAAY 312
K G+Q+HAQ S D+ ++++ +Y +CG + F+Q ++ + ++W A+++ +
Sbjct: 609 KEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGF 668
Query: 313 LQNGFFEEALNLLSKMEADHIPPNEYTLAVLLNSAAGLSAKCHGEQLHARAEKSGLKGNI 372
Q+G EEAL + +M + I N +T + +A+ + G+Q+HA K+G
Sbjct: 669 QQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSET 728
Query: 373 IVGNALIIMYAKSGDILAAQHLFSNMKCCDSVTWNAIITGYSHHGLGKEALSMFWDMLTA 432
V NALI MYAK G I A+ F + + V+WNAII YS HG G EAL F M+ +
Sbjct: 729 EVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHS 788
Query: 433 RECPNYVTFIGVLSACAHLSRVDEGYYYFNHLMKHFGIVPGLEHYTCIVGLLSRSGRLDE 492
PN+VT +GVLSAC+H+ VD+G YF + +G+ P EHY C+V +L+R+G L
Sbjct: 789 NVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSR 848
Query: 493 AENFMRSNPINWDVVAWRTLLNACYIHRNYDKGKQIADYLLQMDHEDVGTYILLSNMHAR 552
A+ F++ PI D + WRTLL+AC +H+N + G+ A +LL+++ ED TY+LLSN++A
Sbjct: 849 AKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAV 908
Query: 553 VRRWDGVVKIRKLMRERNVKKEPGVSWLEIRNIAHVFTSEDNKHSESRQIYKKVRDLLSK 612
++WD R+ M+E+ VKKEPG SW+E++N H F D H + +I++ +DL +
Sbjct: 909 SKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKR 968
Query: 613 IQLLGYVPDIAGVLHDIEDEQKLENLSYHSEKLAVAYGLMKTPSGAPIRVIKNLRMCYDC 672
+GYV D +L++++ EQK + HSEKLA+++GL+ P+ PI V+KNLR+C DC
Sbjct: 969 ASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDC 1028
Query: 673 HTAIKLISKVENRVIIVRDANRFHHFQDGVCSCGDYW 710
H IK +SKV NR IIVRDA RFHHF+ G CSC DYW
Sbjct: 1029 HAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
BLAST of Sed0025996 vs. ExPASy TrEMBL
Match:
A0A6J1F637 (pentatricopeptide repeat-containing protein At5g39680 OS=Cucurbita moschata OX=3662 GN=LOC111441163 PE=3 SV=1)
HSP 1 Score: 1284.6 bits (3323), Expect = 0.0e+00
Identity = 621/711 (87.34%), Postives = 665/711 (93.53%), Query Frame = 0
Query: 1 MPMLKL--PITGLAPVKFTPFLFTSNYLPSPLLDLIKLLKLAADAKNLKFGRIIHAHLII 60
M MLKL PI+ LAPVKFTPFL SN L SPLLD +KLLK+AADAKNLKFGR IHAHLII
Sbjct: 1 MAMLKLPVPISSLAPVKFTPFLSKSNDLASPLLDPMKLLKVAADAKNLKFGRTIHAHLII 60
Query: 61 TNHIHRDCRVNHMNSLINLYVKCDELLVAREMFDRMSRRNVVSWCALMAGYMKNGSPLEV 120
TN + DCRVN +NSLINLYVKCDEL +AR+MFDRMS+RNVVSWCALMAGYM+NGSPLEV
Sbjct: 61 TNRLPGDCRVNQINSLINLYVKCDELFIARQMFDRMSKRNVVSWCALMAGYMQNGSPLEV 120
Query: 121 FGLFKNMVVKDNIFPNEYVISVVVSSCCDGQMYVEGKQCHGFALKSGLELHQYVKNALIQ 180
F LFK M+VKDNIFPNEYVI+ V+SSC D QMYVEG+QCHGF+LKSGLELHQYVKNALIQ
Sbjct: 121 FELFKKMIVKDNIFPNEYVIATVISSCRDSQMYVEGRQCHGFSLKSGLELHQYVKNALIQ 180
Query: 181 MYSKCSDVRAALQILDTVPGYDIFCYNLVLKGLLEHSHIREAIEVLELIIGEGIEWNNAT 240
MYSKCSDVRAAL+ILDTVPGYD+FCYNLVL GLLEHSH+REAIEVL+L+IGEG +WNNAT
Sbjct: 181 MYSKCSDVRAALKILDTVPGYDVFCYNLVLNGLLEHSHVREAIEVLKLMIGEGTKWNNAT 240
Query: 241 YVTIFHLCATLKDLKLGKQVHAQMLKSDIDYDVYIGSSIIDMYGKCGNVLGGRAFFDQLQ 300
+VTIF +CA+LKDLK GK VHA+MLKSDIDYDVYIGSSIIDMYGKCGNVL GRAFFDQLQ
Sbjct: 241 FVTIFRICASLKDLKFGKHVHARMLKSDIDYDVYIGSSIIDMYGKCGNVLSGRAFFDQLQ 300
Query: 301 SQNVVSWTAIMAAYLQNGFFEEALNLLSKMEADHIPPNEYTLAVLLNSAAGLSAKCHGEQ 360
++NVVSWTAIMAAY QNGFFEEALNL SKME DHIPPNEYTLAVLLNSAAGLSA HG+Q
Sbjct: 301 NRNVVSWTAIMAAYFQNGFFEEALNLFSKMEIDHIPPNEYTLAVLLNSAAGLSALSHGDQ 360
Query: 361 LHARAEKSGLKGNIIVGNALIIMYAKSGDILAAQHLFSNMKCCDSVTWNAIITGYSHHGL 420
LHARAEKSGLKGN+IVGNALIIMY+KSGDILAAQ +FSNMKCCDS+TWNAIITG+SHH +
Sbjct: 361 LHARAEKSGLKGNVIVGNALIIMYSKSGDILAAQCVFSNMKCCDSITWNAIITGHSHHCI 420
Query: 421 GKEALSMFWDMLTARECPNYVTFIGVLSACAHLSRVDEGYYYFNHLMKHFGIVPGLEHYT 480
GKEAL++F DMLTARECPNYVTFIGVLSACAHLS VDEG YYFNHLMK FGIVPGLEHYT
Sbjct: 421 GKEALNIFHDMLTARECPNYVTFIGVLSACAHLSLVDEGLYYFNHLMKQFGIVPGLEHYT 480
Query: 481 CIVGLLSRSGRLDEAENFMRSNPINWDVVAWRTLLNACYIHRNYDKGKQIADYLLQMDHE 540
CIVGLLSRSGRLDEAENFMRSNPINWDVVAWRTLLNACY+HRNYDKGKQIA+YLLQMDHE
Sbjct: 481 CIVGLLSRSGRLDEAENFMRSNPINWDVVAWRTLLNACYVHRNYDKGKQIAEYLLQMDHE 540
Query: 541 DVGTYILLSNMHARVRRWDGVVKIRKLMRERNVKKEPGVSWLEIRNIAHVFTSEDNKHSE 600
DVG+YILLSNMHARVRRWDGVVK+RKLMRERNVKKEPGVSWLEIRNIAHVFTSEDNKH E
Sbjct: 541 DVGSYILLSNMHARVRRWDGVVKVRKLMRERNVKKEPGVSWLEIRNIAHVFTSEDNKHPE 600
Query: 601 SRQIYKKVRDLLSKIQLLGYVPDIAGVLHDIEDEQKLENLSYHSEKLAVAYGLMKTPSGA 660
S QIY+ VRDLL+KI+ LGYVPDIAGVLHDIEDEQKL+NLSYHSEKLAVAYGLMK PSGA
Sbjct: 601 SSQIYEMVRDLLTKIRPLGYVPDIAGVLHDIEDEQKLDNLSYHSEKLAVAYGLMKLPSGA 660
Query: 661 PIRVIKNLRMCYDCHTAIKLISKVENRVIIVRDANRFHHFQDGVCSCGDYW 710
PIRVIKNLRMC DCHTAIKLISK+ NR IIVRDANRFHHFQDG CSCGDYW
Sbjct: 661 PIRVIKNLRMCDDCHTAIKLISKLANRTIIVRDANRFHHFQDGFCSCGDYW 711
BLAST of Sed0025996 vs. ExPASy TrEMBL
Match:
A0A6J1KL92 (pentatricopeptide repeat-containing protein At5g39680 OS=Cucurbita maxima OX=3661 GN=LOC111496266 PE=3 SV=1)
HSP 1 Score: 1280.8 bits (3313), Expect = 0.0e+00
Identity = 618/711 (86.92%), Postives = 665/711 (93.53%), Query Frame = 0
Query: 1 MPMLKL--PITGLAPVKFTPFLFTSNYLPSPLLDLIKLLKLAADAKNLKFGRIIHAHLII 60
M MLKL PI+ LAPVKFTPFL SN L SPLLD +KLLK+AADAKNLKFGR+IHAHL+I
Sbjct: 28 MAMLKLPVPISSLAPVKFTPFLSKSNELASPLLDPMKLLKVAADAKNLKFGRVIHAHLVI 87
Query: 61 TNHIHRDCRVNHMNSLINLYVKCDELLVAREMFDRMSRRNVVSWCALMAGYMKNGSPLEV 120
TN I RDCRVN +NSLINLYVKCDEL +AR+MFDRMS+RNVVSWCALMAGYM+NGSPL+V
Sbjct: 88 TNRIPRDCRVNQINSLINLYVKCDELFIARQMFDRMSKRNVVSWCALMAGYMQNGSPLDV 147
Query: 121 FGLFKNMVVKDNIFPNEYVISVVVSSCCDGQMYVEGKQCHGFALKSGLELHQYVKNALIQ 180
F LFK M+VKDNIFPNEYVI+ V+SSC D QMYVEGKQCHGF+LKSGLELHQYVKNALIQ
Sbjct: 148 FELFKKMIVKDNIFPNEYVIATVISSCFDSQMYVEGKQCHGFSLKSGLELHQYVKNALIQ 207
Query: 181 MYSKCSDVRAALQILDTVPGYDIFCYNLVLKGLLEHSHIREAIEVLELIIGEGIEWNNAT 240
MYSKCSDVRAAL+ILDTVPGYD+FCYNLVL GLLEHSH+ EAIEVL+L+I EG +WNNAT
Sbjct: 208 MYSKCSDVRAALKILDTVPGYDVFCYNLVLNGLLEHSHVGEAIEVLKLMIDEGTKWNNAT 267
Query: 241 YVTIFHLCATLKDLKLGKQVHAQMLKSDIDYDVYIGSSIIDMYGKCGNVLGGRAFFDQLQ 300
+VTIF +CA+LKDLKLGK VHA+MLKSDID DVYIGSSIIDMYGKCGNVL GRAFFDQLQ
Sbjct: 268 FVTIFRICASLKDLKLGKHVHARMLKSDIDDDVYIGSSIIDMYGKCGNVLSGRAFFDQLQ 327
Query: 301 SQNVVSWTAIMAAYLQNGFFEEALNLLSKMEADHIPPNEYTLAVLLNSAAGLSAKCHGEQ 360
++NVVSWTAIMAAY QNGFFEEALNL SKME DHIPPNEYTLAVLLNSAAGLSA HG+Q
Sbjct: 328 NRNVVSWTAIMAAYFQNGFFEEALNLFSKMEIDHIPPNEYTLAVLLNSAAGLSALSHGDQ 387
Query: 361 LHARAEKSGLKGNIIVGNALIIMYAKSGDILAAQHLFSNMKCCDSVTWNAIITGYSHHGL 420
LHARAEKSGLKGN+IVGNALIIMY+KSGDILAAQ +FSNMKCCDS+TWNAIITG+SHH +
Sbjct: 388 LHARAEKSGLKGNVIVGNALIIMYSKSGDILAAQLVFSNMKCCDSITWNAIITGHSHHCI 447
Query: 421 GKEALSMFWDMLTARECPNYVTFIGVLSACAHLSRVDEGYYYFNHLMKHFGIVPGLEHYT 480
GKEAL++F DMLTARECPNYVTFIGVLSACAHLS VDEG YYFNHLMK GIVPGLEHYT
Sbjct: 448 GKEALNIFHDMLTARECPNYVTFIGVLSACAHLSLVDEGLYYFNHLMKQLGIVPGLEHYT 507
Query: 481 CIVGLLSRSGRLDEAENFMRSNPINWDVVAWRTLLNACYIHRNYDKGKQIADYLLQMDHE 540
CIVGLLSRSGRLDEAENFMRSNPINWDVVAWRTLLNACY+HRNYDKGKQIA+YLLQMDHE
Sbjct: 508 CIVGLLSRSGRLDEAENFMRSNPINWDVVAWRTLLNACYVHRNYDKGKQIAEYLLQMDHE 567
Query: 541 DVGTYILLSNMHARVRRWDGVVKIRKLMRERNVKKEPGVSWLEIRNIAHVFTSEDNKHSE 600
DVG+YILLSNMHARVRRWDGVVK+RKLMRERNVKKEPGVSWLEIRNIAHVFTSEDNKH E
Sbjct: 568 DVGSYILLSNMHARVRRWDGVVKVRKLMRERNVKKEPGVSWLEIRNIAHVFTSEDNKHPE 627
Query: 601 SRQIYKKVRDLLSKIQLLGYVPDIAGVLHDIEDEQKLENLSYHSEKLAVAYGLMKTPSGA 660
S QIY+ +RDLL+KI+ LGYVPDIAGVLHDIEDEQK++NLSYHSEKLAVAYGLMK+PSGA
Sbjct: 628 SSQIYEMIRDLLTKIRPLGYVPDIAGVLHDIEDEQKIDNLSYHSEKLAVAYGLMKSPSGA 687
Query: 661 PIRVIKNLRMCYDCHTAIKLISKVENRVIIVRDANRFHHFQDGVCSCGDYW 710
PIRVIKNLRMC DCHTAIKLISKV NR IIVRDANRFHHFQDG CSCGDYW
Sbjct: 688 PIRVIKNLRMCDDCHTAIKLISKVANRTIIVRDANRFHHFQDGFCSCGDYW 738
BLAST of Sed0025996 vs. ExPASy TrEMBL
Match:
A0A6J1CRJ5 (pentatricopeptide repeat-containing protein At5g39680 OS=Momordica charantia OX=3673 GN=LOC111014104 PE=3 SV=1)
HSP 1 Score: 1252.7 bits (3240), Expect = 0.0e+00
Identity = 610/709 (86.04%), Postives = 647/709 (91.26%), Query Frame = 0
Query: 1 MPMLKLPITGLAPVKFTPFLFTSNYLPSPLLDLIKLLKLAADAKNLKFGRIIHAHLIITN 60
MP LKLP +GL PFLF SNY SP + IKLLKLAADAKNLKFGRIIHAHLIITN
Sbjct: 1 MPTLKLPTSGL-----PPFLFKSNYFASPTQNPIKLLKLAADAKNLKFGRIIHAHLIITN 60
Query: 61 HIHRDCRVNHMNSLINLYVKCDELLVAREMFDRMSRRNVVSWCALMAGYMKNGSPLEVFG 120
H DCRVN +NSLIN Y KCDELLVAR+MFDRM +RNVVSW ALMAGYM+NGS LEVF
Sbjct: 61 HTPGDCRVNQINSLINFYAKCDELLVARQMFDRMPKRNVVSWSALMAGYMQNGSSLEVFR 120
Query: 121 LFKNMVVKDNIFPNEYVISVVVSSCCDGQMYVEGKQCHGFALKSGLELHQYVKNALIQMY 180
L K MVV+D+I PNEYVI+ +VSSCC QMYVEGKQCHG+ALKSGLELHQYVKNALIQMY
Sbjct: 121 LLKKMVVEDDICPNEYVIATIVSSCCGSQMYVEGKQCHGYALKSGLELHQYVKNALIQMY 180
Query: 181 SKCSDVRAALQILDTVPGYDIFCYNLVLKGLLEHSHIREAIEVLELIIGEGIEWNNATYV 240
SKCSDVRAA+QILDTVPGYDIFCYNLVL GLLEHSH+REAIEVL L+IGE IEWNNATYV
Sbjct: 181 SKCSDVRAAMQILDTVPGYDIFCYNLVLNGLLEHSHLREAIEVLNLMIGEEIEWNNATYV 240
Query: 241 TIFHLCATLKDLKLGKQVHAQMLKSDIDYDVYIGSSIIDMYGKCGNVLGGRAFFDQLQSQ 300
TIF LCA+LKDL+LGKQVHAQML++DIDYDVYIGSSIIDMYGKCG VL GR FFD+LQSQ
Sbjct: 241 TIFRLCASLKDLELGKQVHAQMLRNDIDYDVYIGSSIIDMYGKCGKVLSGRTFFDRLQSQ 300
Query: 301 NVVSWTAIMAAYLQNGFFEEALNLLSKMEADHIPPNEYTLAVLLNSAAGLSAKCHGEQLH 360
NVVSWT IMAAY QNGFFEEALNL SKME D IPPNEYTLAV LNSAAGLSA HG+QLH
Sbjct: 301 NVVSWTTIMAAYFQNGFFEEALNLFSKMEIDCIPPNEYTLAVSLNSAAGLSALSHGDQLH 360
Query: 361 ARAEKSGLKGNIIVGNALIIMYAKSGDILAAQHLFSNMKCCDSVTWNAIITGYSHHGLGK 420
ARAEKSGLKGN+IVGNALIIMY+KSGDILAAQH+FSNM CCDS+TWNAIITG+SHHGLGK
Sbjct: 361 ARAEKSGLKGNVIVGNALIIMYSKSGDILAAQHVFSNMICCDSITWNAIITGHSHHGLGK 420
Query: 421 EALSMFWDMLTARECPNYVTFIGVLSACAHLSRVDEGYYYFNHLMKHFGIVPGLEHYTCI 480
EALSMF DML ECPNYVTFIGVLSACAHLS V EG+YYFNHLMK FGIVPGLEHYTCI
Sbjct: 421 EALSMFQDMLATGECPNYVTFIGVLSACAHLSLVHEGFYYFNHLMKQFGIVPGLEHYTCI 480
Query: 481 VGLLSRSGRLDEAENFMRSNPINWDVVAWRTLLNACYIHRNYDKGKQIADYLLQMDHEDV 540
+GLLSRSG+LDEAENFMRSNPINWDVVAWRTLL ACY+HRNYDKGKQIA+YLLQMD EDV
Sbjct: 481 IGLLSRSGQLDEAENFMRSNPINWDVVAWRTLLTACYVHRNYDKGKQIAEYLLQMDPEDV 540
Query: 541 GTYILLSNMHARVRRWDGVVKIRKLMRERNVKKEPGVSWLEIRNIAHVFTSEDNKHSESR 600
G+YILLSNMHARVRRWDGVVKIRKLMRERNVKKEPGVSWLEIRNIAHVFTSEDNKH ES
Sbjct: 541 GSYILLSNMHARVRRWDGVVKIRKLMRERNVKKEPGVSWLEIRNIAHVFTSEDNKHPESS 600
Query: 601 QIYKKVRDLLSKIQLLGYVPDIAGVLHDIEDEQKLENLSYHSEKLAVAYGLMKTPSGAPI 660
QIY+KVRDLLS+IQ LGYVPDIAGVLHDI+DEQKL+NLSYHSEKLAVAYGLMKTP GAPI
Sbjct: 601 QIYEKVRDLLSRIQPLGYVPDIAGVLHDIDDEQKLDNLSYHSEKLAVAYGLMKTPLGAPI 660
Query: 661 RVIKNLRMCYDCHTAIKLISKVENRVIIVRDANRFHHFQDGVCSCGDYW 710
RVIKNLRMC DCHTA+KLISKV NRVIIVRDANRFHHF+DG CSCGDYW
Sbjct: 661 RVIKNLRMCDDCHTAVKLISKVANRVIIVRDANRFHHFEDGCCSCGDYW 704
BLAST of Sed0025996 vs. ExPASy TrEMBL
Match:
A0A0A0KR26 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G292190 PE=3 SV=1)
HSP 1 Score: 1183.7 bits (3061), Expect = 0.0e+00
Identity = 573/709 (80.82%), Postives = 635/709 (89.56%), Query Frame = 0
Query: 1 MPMLKLPITGLAPVKFTPFLFTSNYLPSPLLDLIKLLKLAADAKNLKFGRIIHAHLIITN 60
M +LKLPIT + PVKFTPFL SN+L SP D IKLLK+AADAKNLKFGR IHAHL ITN
Sbjct: 1 MSILKLPITDIMPVKFTPFLSRSNFLASPHQDPIKLLKVAADAKNLKFGRTIHAHLTITN 60
Query: 61 HIHRDCRVNHMNSLINLYVKCDELLVAREMFDRMSRRNVVSWCALMAGYMKNGSPLEVFG 120
H +RD +VN +NSLINLYVKCDE+ +AR++FD M RRNVVSW ALMAGYM+NG+PLEVF
Sbjct: 61 HNYRDSKVNQLNSLINLYVKCDEVSIARKLFDSMPRRNVVSWSALMAGYMQNGNPLEVFE 120
Query: 121 LFKNMVVKDNIFPNEYVISVVVSSCCDGQMYVEGKQCHGFALKSGLELHQYVKNALIQMY 180
LFK MVVKDNIFPNEYVI+ +SS CD QMYVEGKQCHG+ALKSGLE HQYVKNALIQ+Y
Sbjct: 121 LFKKMVVKDNIFPNEYVIATAISS-CDSQMYVEGKQCHGYALKSGLEFHQYVKNALIQLY 180
Query: 181 SKCSDVRAALQILDTVPGYDIFCYNLVLKGLLEHSHIREAIEVLELIIGEGIEWNNATYV 240
SKCSDV AA+QIL TVPG DIFCYNLV+ GLL+H+H+ EA++VL+LII EGIEWNNATYV
Sbjct: 181 SKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQHTHMAEAVDVLKLIISEGIEWNNATYV 240
Query: 241 TIFHLCATLKDLKLGKQVHAQMLKSDIDYDVYIGSSIIDMYGKCGNVLGGRAFFDQLQSQ 300
TIF LCA+LKD+ LGKQVHAQMLKSDID DVYIGSSIIDMYGKCGNVL GR FFD+LQS+
Sbjct: 241 TIFRLCASLKDITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSR 300
Query: 301 NVVSWTAIMAAYLQNGFFEEALNLLSKMEADHIPPNEYTLAVLLNSAAGLSAKCHGEQLH 360
NVVSWT+I+AAY QN FFEEALNL SKME D IPPNEYT+AVL NSAAGLSA C G+QLH
Sbjct: 301 NVVSWTSIIAAYFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCLGDQLH 360
Query: 361 ARAEKSGLKGNIIVGNALIIMYAKSGDILAAQHLFSNMKCCDSVTWNAIITGYSHHGLGK 420
ARAEKSGLKGN++VGNALIIMY KSGDILAAQ +FSNM CC+ +TWNAIITG+SHHGLGK
Sbjct: 361 ARAEKSGLKGNVMVGNALIIMYFKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGK 420
Query: 421 EALSMFWDMLTARECPNYVTFIGVLSACAHLSRVDEGYYYFNHLMKHFGIVPGLEHYTCI 480
EALSMF DM+ E PNYVTFIGV+ ACAHL VDEG+YYFNHLMK F IVPGLEHYTCI
Sbjct: 421 EALSMFQDMMATGERPNYVTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCI 480
Query: 481 VGLLSRSGRLDEAENFMRSNPINWDVVAWRTLLNACYIHRNYDKGKQIADYLLQMDHEDV 540
VGLLSRSGRLDEAENFMRS+ INWDVV+WRTLLNACY+H++YDKG++IA+YLLQ++ DV
Sbjct: 481 VGLLSRSGRLDEAENFMRSHQINWDVVSWRTLLNACYVHKHYDKGRKIAEYLLQLEPRDV 540
Query: 541 GTYILLSNMHARVRRWDGVVKIRKLMRERNVKKEPGVSWLEIRNIAHVFTSEDNKHSESR 600
GTYILLSNMHARVRRWD VV+IRKLMRERNVKKEPGVSWLEIRN+AHVFTSED KH E+
Sbjct: 541 GTYILLSNMHARVRRWDHVVEIRKLMRERNVKKEPGVSWLEIRNVAHVFTSEDIKHPEAN 600
Query: 601 QIYKKVRDLLSKIQLLGYVPDIAGVLHDIEDEQKLENLSYHSEKLAVAYGLMKTPSGAPI 660
IY+ V+DLLSKI+ LGYVPDI VLHDIEDEQK++NLSYHSEKLAVAYGLMKTPSGAPI
Sbjct: 601 LIYENVKDLLSKIRPLGYVPDIDNVLHDIEDEQKVDNLSYHSEKLAVAYGLMKTPSGAPI 660
Query: 661 RVIKNLRMCYDCHTAIKLISKVENRVIIVRDANRFHHFQDGVCSCGDYW 710
VIKNLRMC DCHTAIKLISKV NRVI+VRDANRFHHFQ+G CSCGDYW
Sbjct: 661 TVIKNLRMCDDCHTAIKLISKVANRVIVVRDANRFHHFQNGCCSCGDYW 708
BLAST of Sed0025996 vs. ExPASy TrEMBL
Match:
A0A1S4E243 (pentatricopeptide repeat-containing protein At5g39680 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496677 PE=3 SV=1)
HSP 1 Score: 1163.3 bits (3008), Expect = 0.0e+00
Identity = 563/709 (79.41%), Postives = 630/709 (88.86%), Query Frame = 0
Query: 1 MPMLKLPITGLAPVKFTPFLFTSNYLPSPLLDLIKLLKLAADAKNLKFGRIIHAHLIITN 60
M +LKLPI+ + PVKFTPFL S++ SP D IKLLK+AADAKNL FGR I AHL ITN
Sbjct: 1 MSILKLPISDIMPVKFTPFLSRSDFFASPHQDPIKLLKVAADAKNLIFGRTIQAHLTITN 60
Query: 61 HIHRDCRVNHMNSLINLYVKCDELLVAREMFDRMSRRNVVSWCALMAGYMKNGSPLEVFG 120
H +RD +VN +NSLINLYVKC E+ +AR++FD M RRNVVSW LMAGYM+NG+P EVF
Sbjct: 61 HNYRDSKVNQLNSLINLYVKCGEVSIARKVFDSMPRRNVVSWSTLMAGYMQNGNPSEVFE 120
Query: 121 LFKNMVVKDNIFPNEYVISVVVSSCCDGQMYVEGKQCHGFALKSGLELHQYVKNALIQMY 180
LFK MV+KDNI PN+YVI+ V+SS C+ QMYVEGKQCHG+ALKSGLE HQYVKNALIQ+Y
Sbjct: 121 LFKKMVLKDNILPNKYVIATVISS-CNSQMYVEGKQCHGYALKSGLEFHQYVKNALIQLY 180
Query: 181 SKCSDVRAALQILDTVPGYDIFCYNLVLKGLLEHSHIREAIEVLELIIGEGIEWNNATYV 240
SKCSDV AA+QIL TVPG DIFCYNLV+ GLL+H+H+REA++VL+LII +GIEWN+ATYV
Sbjct: 181 SKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQHTHMREAVDVLKLIISKGIEWNSATYV 240
Query: 241 TIFHLCATLKDLKLGKQVHAQMLKSDIDYDVYIGSSIIDMYGKCGNVLGGRAFFDQLQSQ 300
TIF LCA+LKD+ LGKQVHAQMLKSDID DVYIGSSIIDMYGKCGNVL GR FFD+LQS+
Sbjct: 241 TIFRLCASLKDITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSR 300
Query: 301 NVVSWTAIMAAYLQNGFFEEALNLLSKMEADHIPPNEYTLAVLLNSAAGLSAKCHGEQLH 360
NVVSWT+IMAAY QN FFEEAL+L SKME D IPPNEYT+AVL NSAAGLSA C G+QLH
Sbjct: 301 NVVSWTSIMAAYFQNEFFEEALDLFSKMEIDRIPPNEYTMAVLFNSAAGLSALCLGDQLH 360
Query: 361 ARAEKSGLKGNIIVGNALIIMYAKSGDILAAQHLFSNMKCCDSVTWNAIITGYSHHGLGK 420
ARAEKSGLKGN++VGNALIIMY KSGDILAAQ +FSNM CCD +TWNAIITG+SHHGLGK
Sbjct: 361 ARAEKSGLKGNVMVGNALIIMYFKSGDILAAQRVFSNMTCCDIITWNAIITGHSHHGLGK 420
Query: 421 EALSMFWDMLTARECPNYVTFIGVLSACAHLSRVDEGYYYFNHLMKHFGIVPGLEHYTCI 480
EALSMF DM+T E PNYVTFIGV+SACAHL VDEG+YYFNHLMK FGIVPGLEHYTCI
Sbjct: 421 EALSMFQDMMTTGERPNYVTFIGVISACAHLKLVDEGFYYFNHLMKQFGIVPGLEHYTCI 480
Query: 481 VGLLSRSGRLDEAENFMRSNPINWDVVAWRTLLNACYIHRNYDKGKQIADYLLQMDHEDV 540
VGLLSRSGRLDEAENFMRS+ INWDVV+WRTLLNACY+H++YDKGKQIA+YLLQ++ DV
Sbjct: 481 VGLLSRSGRLDEAENFMRSHQINWDVVSWRTLLNACYVHKHYDKGKQIAEYLLQLEPRDV 540
Query: 541 GTYILLSNMHARVRRWDGVVKIRKLMRERNVKKEPGVSWLEIRNIAHVFTSEDNKHSESR 600
GTYILLSNMHARVRRWD VV+IRKLMRERNVKKEPGVSWLEIRN+AHVFTSED KH ++
Sbjct: 541 GTYILLSNMHARVRRWDRVVEIRKLMRERNVKKEPGVSWLEIRNVAHVFTSEDIKHPDAN 600
Query: 601 QIYKKVRDLLSKIQLLGYVPDIAGVLHDIEDEQKLENLSYHSEKLAVAYGLMKTPSGAPI 660
IY+ V++LLSKI+ LGYVPDI VLHDIEDEQK+ NLSYHSEKLAVAYGLMKT SG PI
Sbjct: 601 LIYENVKNLLSKIRPLGYVPDIDNVLHDIEDEQKVNNLSYHSEKLAVAYGLMKTTSGTPI 660
Query: 661 RVIKNLRMCYDCHTAIKLISKVENRVIIVRDANRFHHFQDGVCSCGDYW 710
RVIKNLRMC DCHTAIKLIS+V NRVIIVRD NRFHHFQ+G CSCGDYW
Sbjct: 661 RVIKNLRMCDDCHTAIKLISQVANRVIIVRDVNRFHHFQNGCCSCGDYW 708
BLAST of Sed0025996 vs. TAIR 10
Match:
AT5G39680.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 744.2 bits (1920), Expect = 9.7e-215
Identity = 360/687 (52.40%), Postives = 471/687 (68.56%), Query Frame = 0
Query: 23 SNYLPSPLLDLIKLLKLAADAKNLKFGRIIHAHLIITNHIHRDCRVNHMNSLINLYVKCD 82
S P P+ L +LLK+ A++ L+ G IHAHLI+TN R +NSLINLYVKC
Sbjct: 24 SKKTPFPIDRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCR 83
Query: 83 ELLVAREMFDRMSRRNVVSWCALMAGYMKNGSPLEVFGLFKNMVVKDNIFPNEYVISVVV 142
E + AR++FD M RNVVSWCA+M GY +G EV LFK+M PNE+V +VV
Sbjct: 84 ETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVF 143
Query: 143 SSCCDGQMYVEGKQCHGFALKSGLELHQYVKNALIQMYSKCSDVRAALQILDTVPGYDIF 202
SC + EGKQ HG LK GL H++V+N L+ MYS CS A+++LD +P D+
Sbjct: 144 KSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLS 203
Query: 203 CYNLVLKGLLEHSHIREAIEVLELIIGEGIEWNNATYVTIFHLCATLKDLKLGKQVHAQM 262
++ L G LE +E ++VL E WNN TY++ L + L+DL L QVH++M
Sbjct: 204 VFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRM 263
Query: 263 LKSDIDYDVYIGSSIIDMYGKCGNVLGGRAFFDQLQSQNVVSWTAIMAAYLQNGFFEEAL 322
++ + +V ++I+MYGKCG VL + FD +QN+ T IM AY Q+ FEEAL
Sbjct: 264 VRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEAL 323
Query: 323 NLLSKMEADHIPPNEYTLAVLLNSAAGLSAKCHGEQLHARAEKSGLKGNIIVGNALIIMY 382
NL SKM+ +PPNEYT A+LLNS A LS G+ LH KSG + +++VGNAL+ MY
Sbjct: 324 NLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMY 383
Query: 383 AKSGDILAAQHLFSNMKCCDSVTWNAIITGYSHHGLGKEALSMFWDMLTARECPNYVTFI 442
AKSG I A+ FS M D VTWN +I+G SHHGLG+EAL F M+ E PN +TFI
Sbjct: 384 AKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFI 443
Query: 443 GVLSACAHLSRVDEGYYYFNHLMKHFGIVPGLEHYTCIVGLLSRSGRLDEAENFMRSNPI 502
GVL AC+H+ V++G +YFN LMK F + P ++HYTCIVGLLS++G +AE+FMR+ PI
Sbjct: 444 GVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPI 503
Query: 503 NWDVVAWRTLLNACYIHRNYDKGKQIADYLLQMDHEDVGTYILLSNMHARVRRWDGVVKI 562
WDVVAWRTLLNACY+ RNY GK++A+Y ++ D G Y+LLSN+HA+ R W+GV K+
Sbjct: 504 EWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKV 563
Query: 563 RKLMRERNVKKEPGVSWLEIRNIAHVFTSEDNKHSESRQIYKKVRDLLSKIQLLGYVPDI 622
R LM R VKKEPGVSW+ IRN HVF +EDN+H E IY KV++++SKI+ LGY PD+
Sbjct: 564 RSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDV 623
Query: 623 AGVLHDIEDEQKLENLSYHSEKLAVAYGLMKTPSGAPIRVIKNLRMCYDCHTAIKLISKV 682
AG HD+++EQ+ +NLSYHSEKLAVAYGL+KTP +P+ V KN+R+C DCH+AIKLISK+
Sbjct: 624 AGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKI 683
Query: 683 ENRVIIVRDANRFHHFQDGVCSCGDYW 710
R I++RD+NRFHHF DG CSC DYW
Sbjct: 684 SKRYIVIRDSNRFHHFLDGQCSCCDYW 710
BLAST of Sed0025996 vs. TAIR 10
Match:
AT4G33170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 491.5 bits (1264), Expect = 1.1e-138
Identity = 257/679 (37.85%), Postives = 401/679 (59.06%), Query Frame = 0
Query: 34 IKLLKLAADAKNLKFGRIIHAHLIITNHIHRDCRVNHMNSLINLYVKCDELLVAREMFDR 93
I +L A +L G+ +H + + D + NSLIN+Y K + AR +FD
Sbjct: 319 ILMLATAVKVDSLALGQQVHCMAL---KLGLDLMLTVSNSLINMYCKLRKFGFARTVFDN 378
Query: 94 MSRRNVVSWCALMAGYMKNGSPLEVFGLFKNMVVKDNIFPNEYVISVVV---SSCCDGQM 153
MS R+++SW +++AG +NG +E LF + ++ + P++Y ++ V+ SS +G
Sbjct: 379 MSERDLISWNSVIAGIAQNGLEVEAVCLFMQL-LRCGLKPDQYTMTSVLKAASSLPEGLS 438
Query: 154 YVEGKQCHGFALKSGLELHQYVKNALIQMYSKCSDVRAALQILDTVPGYDIFCYNLVLKG 213
KQ H A+K +V ALI YS+ ++ A +IL +D+ +N ++ G
Sbjct: 439 L--SKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEA-EILFERHNFDLVAWNAMMAG 498
Query: 214 LLEHSHIREAIEVLELIIGEGIEWNNATYVTIFHLCATLKDLKLGKQVHAQMLKSDIDYD 273
+ + +++ L+ +G ++ T T+F C L + GKQVHA +KS D D
Sbjct: 499 YTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLD 558
Query: 274 VYIGSSIIDMYGKCGNVLGGRAFFDQLQSQNVVSWTAIMAAYLQNGFFEEALNLLSKMEA 333
+++ S I+DMY KCG++ + FD + + V+WT +++ ++NG E A ++ S+M
Sbjct: 559 LWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRL 618
Query: 334 DHIPPNEYTLAVLLNSAAGLSAKCHGEQLHARAEKSGLKGNIIVGNALIIMYAKSGDILA 393
+ P+E+T+A L +++ L+A G Q+HA A K + VG +L+ MYAK G I
Sbjct: 619 MGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDD 678
Query: 394 AQHLFSNMKCCDSVTWNAIITGYSHHGLGKEALSMFWDMLTARECPNYVTFIGVLSACAH 453
A LF ++ + WNA++ G + HG GKE L +F M + P+ VTFIGVLSAC+H
Sbjct: 679 AYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSH 738
Query: 454 LSRVDEGYYYFNHLMKHFGIVPGLEHYTCIVGLLSRSGRLDEAENFMRSNPINWDVVAWR 513
V E Y + + +GI P +EHY+C+ L R+G + +AEN + S + +R
Sbjct: 739 SGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYR 798
Query: 514 TLLNACYIHRNYDKGKQIADYLLQMDHEDVGTYILLSNMHARVRRWDGVVKIRKLMRERN 573
TLL AC + + + GK++A LL+++ D Y+LLSNM+A +WD + R +M+
Sbjct: 799 TLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHK 858
Query: 574 VKKEPGVSWLEIRNIAHVFTSEDNKHSESRQIYKKVRDLLSKIQLLGYVPDIAGVLHDIE 633
VKK+PG SW+E++N H+F +D + ++ IY+KV+D++ I+ GYVP+ L D+E
Sbjct: 859 VKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVE 918
Query: 634 DEQKLENLSYHSEKLAVAYGLMKTPSGAPIRVIKNLRMCYDCHTAIKLISKVENRVIIVR 693
+E+K L YHSEKLAVA+GL+ TP PIRVIKNLR+C DCH A+K I+KV NR I++R
Sbjct: 919 EEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLR 978
Query: 694 DANRFHHFQDGVCSCGDYW 710
DANRFH F+DG+CSCGDYW
Sbjct: 979 DANRFHRFKDGICSCGDYW 990
BLAST of Sed0025996 vs. TAIR 10
Match:
AT2G27610.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 481.1 bits (1237), Expect = 1.5e-135
Identity = 249/664 (37.50%), Postives = 397/664 (59.79%), Query Frame = 0
Query: 49 GRIIHAHLIITNHIHRDCRVNHMNSLINLYVKCDELLVAREMFDRMSRRNVVSWCALMAG 108
GR + H ++ + D + NSLINLY+KC + AR +FD+ ++VV+W ++++G
Sbjct: 211 GRGLQVHTVVVKN-GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISG 270
Query: 109 YMKNGSPLEVFGLFKNMVVKDNIFPNEYVISVVVSSCCDGQMYVEGKQCHGFALKSGLEL 168
Y NG LE G+F +M + + + +E + V+ C + + +Q H +K G
Sbjct: 271 YAANGLDLEALGMFYSMRL-NYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLF 330
Query: 169 HQYVKNALIQMYSKCSDVRAALQILDTVPGY-DIFCYNLVLKGLLEHSHIREAIEVLELI 228
Q ++ AL+ YSKC+ + AL++ + ++ + ++ G L++ EA+++ +
Sbjct: 331 DQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEM 390
Query: 229 IGEGIEWNNATYVTIFHLCATLKDLKLGKQVHAQMLKSDIDYDVYIGSSIIDMYGKCGNV 288
+G+ N TY I + +VHAQ++K++ + +G++++D Y K G V
Sbjct: 391 KRKGVRPNEFTYSVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKV 450
Query: 289 LGGRAFFDQLQSQNVVSWTAIMAAYLQNGFFEEALNLLSKMEADHIPPNEYTLAVLLNSA 348
F + +++V+W+A++A Y Q G E A+ + ++ I PNE+T + +LN
Sbjct: 451 EEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVC 510
Query: 349 AGLSAKC-HGEQLHARAEKSGLKGNIIVGNALIIMYAKSGDILAAQHLFSNMKCCDSVTW 408
A +A G+Q H A KS L ++ V +AL+ MYAK G+I +A+ +F + D V+W
Sbjct: 511 AATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSW 570
Query: 409 NAIITGYSHHGLGKEALSMFWDMLTARECPNYVTFIGVLSACAHLSRVDEGYYYFNHLMK 468
N++I+GY+ HG +AL +F +M + + VTFIGV +AC H V+EG YF+ +++
Sbjct: 571 NSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVR 630
Query: 469 HFGIVPGLEHYTCIVGLLSRSGRLDEAENFMRSNPINWDVVAWRTLLNACYIHRNYDKGK 528
I P EH +C+V L SR+G+L++A + + P WRT+L AC +H+ + G+
Sbjct: 631 DCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGR 690
Query: 529 QIADYLLQMDHEDVGTYILLSNMHARVRRWDGVVKIRKLMRERNVKKEPGVSWLEIRNIA 588
A+ ++ M ED Y+LLSNM+A W K+RKLM ERNVKKEPG SW+E++N
Sbjct: 691 LAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKT 750
Query: 589 HVFTSEDNKHSESRQIYKKVRDLLSKIQLLGYVPDIAGVLHDIEDEQKLENLSYHSEKLA 648
+ F + D H QIY K+ DL ++++ LGY PD + VL DI+DE K L+ HSE+LA
Sbjct: 751 YSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLA 810
Query: 649 VAYGLMKTPSGAPIRVIKNLRMCYDCHTAIKLISKVENRVIIVRDANRFHHF-QDGVCSC 708
+A+GL+ TP G+P+ +IKNLR+C DCH IKLI+K+E R I+VRD+NRFHHF DGVCSC
Sbjct: 811 IAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSC 868
Query: 709 GDYW 710
GD+W
Sbjct: 871 GDFW 868
BLAST of Sed0025996 vs. TAIR 10
Match:
AT2G22070.1 (pentatricopeptide (PPR) repeat-containing protein )
HSP 1 Score: 480.3 bits (1235), Expect = 2.6e-135
Identity = 250/704 (35.51%), Postives = 393/704 (55.82%), Query Frame = 0
Query: 72 NSLINLYVKCDELLVAREMFDRMSRRNVVSWCALMAGYMKNGSPLEVFGLFKNMVVKDNI 131
N++++ Y K ++ E FD++ +R+ VSW ++ GY G + + +M VK+ I
Sbjct: 84 NTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDM-VKEGI 143
Query: 132 FPNEYVISVVVSSCCDGQMYVEGKQCHGFALKSGLELHQYVKNALIQMYSKCSDVRAALQ 191
P ++ ++ V++S + GK+ H F +K GL + V N+L+ MY+KC D A
Sbjct: 144 EPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKF 203
Query: 192 ILD-------------------------------TVPGYDIFCYNLVLKGLLEHSHIREA 251
+ D + DI +N ++ G + + A
Sbjct: 204 VFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRA 263
Query: 252 IEVLELIIGEG-IEWNNATYVTIFHLCATLKDLKLGKQVHAQMLKSDIDYDVYIGSSIID 311
+++ ++ + + + T ++ CA L+ L +GKQ+H+ ++ + D + +++I
Sbjct: 264 LDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALIS 323
Query: 312 MYGKCGNVLGGRAFFDQ---------------------------------LQSQNVVSWT 371
MY +CG V R +Q L+ ++VV+WT
Sbjct: 324 MYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWT 383
Query: 372 AIMAAYLQNGFFEEALNLLSKMEADHIPPNEYTLAVLLNSAAGLSAKCHGEQLHARAEKS 431
A++ Y Q+G + EA+NL M PN YTLA +L+ A+ L++ HG+Q+H A KS
Sbjct: 384 AMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKS 443
Query: 432 GLKGNIIVGNALIIMYAKSGDILAAQHLFSNMKC-CDSVTWNAIITGYSHHGLGKEALSM 491
G ++ V NALI MYAK+G+I +A F ++C D+V+W ++I + HG +EAL +
Sbjct: 444 GEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALEL 503
Query: 492 FWDMLTARECPNYVTFIGVLSACAHLSRVDEGYYYFNHLMKHFGIVPGLEHYTCIVGLLS 551
F ML P+++T++GV SAC H V++G YF+ + I+P L HY C+V L
Sbjct: 504 FETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFG 563
Query: 552 RSGRLDEAENFMRSNPINWDVVAWRTLLNACYIHRNYDKGKQIADYLLQMDHEDVGTYIL 611
R+G L EA+ F+ PI DVV W +LL+AC +H+N D GK A+ LL ++ E+ G Y
Sbjct: 564 RAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSA 623
Query: 612 LSNMHARVRRWDGVVKIRKLMRERNVKKEPGVSWLEIRNIAHVFTSEDNKHSESRQIYKK 671
L+N+++ +W+ KIRK M++ VKKE G SW+E+++ HVF ED H E +IY
Sbjct: 624 LANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMT 683
Query: 672 VRDLLSKIQLLGYVPDIAGVLHDIEDEQKLENLSYHSEKLAVAYGLMKTPSGAPIRVIKN 710
++ + +I+ +GYVPD A VLHD+E+E K + L +HSEKLA+A+GL+ TP +R++KN
Sbjct: 684 MKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKN 743
BLAST of Sed0025996 vs. TAIR 10
Match:
AT4G13650.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 478.0 bits (1229), Expect = 1.3e-134
Identity = 236/637 (37.05%), Postives = 369/637 (57.93%), Query Frame = 0
Query: 73 SLINLYVKCDELLVAREMFDRMSRRNVVSWCALMAGYMKNGSPLEVFGLFKNMVVKDNIF 132
+L+NLY KC ++ A + F NVV W ++ Y F +F+ M +++ I
Sbjct: 429 ALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEE-IV 488
Query: 133 PNEYVISVVVSSCCDGQMYVEGKQCHGFALKSGLELHQYVKNALIQMYSKCSDVRAALQI 192
PN+Y ++ +C G+Q H +K+ +L+ YV + LI MY+K + A I
Sbjct: 489 PNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDI 548
Query: 193 LDTVPGYDIFCYNLVLKGLLEHSHIREAIEVLELIIGEGIEWNNATYVTIFHLCATLKDL 252
L G D+ + ++ G +++ +A+ ++ GI + CA L+ L
Sbjct: 549 LIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQAL 608
Query: 253 KLGKQVHAQMLKSDIDYDVYIGSSIIDMYGKCGNVLGGRAFFDQLQSQNVVSWTAIMAAY 312
K G+Q+HAQ S D+ ++++ +Y +CG + F+Q ++ + ++W A+++ +
Sbjct: 609 KEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGF 668
Query: 313 LQNGFFEEALNLLSKMEADHIPPNEYTLAVLLNSAAGLSAKCHGEQLHARAEKSGLKGNI 372
Q+G EEAL + +M + I N +T + +A+ + G+Q+HA K+G
Sbjct: 669 QQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSET 728
Query: 373 IVGNALIIMYAKSGDILAAQHLFSNMKCCDSVTWNAIITGYSHHGLGKEALSMFWDMLTA 432
V NALI MYAK G I A+ F + + V+WNAII YS HG G EAL F M+ +
Sbjct: 729 EVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHS 788
Query: 433 RECPNYVTFIGVLSACAHLSRVDEGYYYFNHLMKHFGIVPGLEHYTCIVGLLSRSGRLDE 492
PN+VT +GVLSAC+H+ VD+G YF + +G+ P EHY C+V +L+R+G L
Sbjct: 789 NVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSR 848
Query: 493 AENFMRSNPINWDVVAWRTLLNACYIHRNYDKGKQIADYLLQMDHEDVGTYILLSNMHAR 552
A+ F++ PI D + WRTLL+AC +H+N + G+ A +LL+++ ED TY+LLSN++A
Sbjct: 849 AKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAV 908
Query: 553 VRRWDGVVKIRKLMRERNVKKEPGVSWLEIRNIAHVFTSEDNKHSESRQIYKKVRDLLSK 612
++WD R+ M+E+ VKKEPG SW+E++N H F D H + +I++ +DL +
Sbjct: 909 SKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKR 968
Query: 613 IQLLGYVPDIAGVLHDIEDEQKLENLSYHSEKLAVAYGLMKTPSGAPIRVIKNLRMCYDC 672
+GYV D +L++++ EQK + HSEKLA+++GL+ P+ PI V+KNLR+C DC
Sbjct: 969 ASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDC 1028
Query: 673 HTAIKLISKVENRVIIVRDANRFHHFQDGVCSCGDYW 710
H IK +SKV NR IIVRDA RFHHF+ G CSC DYW
Sbjct: 1029 HAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAG6588362.1 | 0.0e+00 | 87.34 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
| XP_022933883.1 | 0.0e+00 | 87.34 | pentatricopeptide repeat-containing protein At5g39680 [Cucurbita moschata] | [more] |
| XP_023002421.1 | 0.0e+00 | 86.92 | pentatricopeptide repeat-containing protein At5g39680 [Cucurbita maxima] >XP_023... | [more] |
| XP_023529544.1 | 0.0e+00 | 86.78 | pentatricopeptide repeat-containing protein At5g39680 [Cucurbita pepo subsp. pep... | [more] |
| KAG7022211.1 | 0.0e+00 | 87.32 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Q9FK93 | 1.4e-213 | 52.40 | Pentatricopeptide repeat-containing protein At5g39680 OS=Arabidopsis thaliana OX... | [more] |
| Q9SMZ2 | 1.6e-137 | 37.85 | Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX... | [more] |
| Q9ZUW3 | 2.2e-134 | 37.50 | Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana OX... | [more] |
| Q9SHZ8 | 3.7e-134 | 35.51 | Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX... | [more] |
| Q9SVP7 | 1.8e-133 | 37.05 | Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1F637 | 0.0e+00 | 87.34 | pentatricopeptide repeat-containing protein At5g39680 OS=Cucurbita moschata OX=3... | [more] |
| A0A6J1KL92 | 0.0e+00 | 86.92 | pentatricopeptide repeat-containing protein At5g39680 OS=Cucurbita maxima OX=366... | [more] |
| A0A6J1CRJ5 | 0.0e+00 | 86.04 | pentatricopeptide repeat-containing protein At5g39680 OS=Momordica charantia OX=... | [more] |
| A0A0A0KR26 | 0.0e+00 | 80.82 | DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G2921... | [more] |
| A0A1S4E243 | 0.0e+00 | 79.41 | pentatricopeptide repeat-containing protein At5g39680 isoform X2 OS=Cucumis melo... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT5G39680.1 | 9.7e-215 | 52.40 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT4G33170.1 | 1.1e-138 | 37.85 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT2G27610.1 | 1.5e-135 | 37.50 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT2G22070.1 | 2.6e-135 | 35.51 | pentatricopeptide (PPR) repeat-containing protein | [more] |
| AT4G13650.1 | 1.3e-134 | 37.05 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
