Sed0025965 (gene) Chayote v1

Overview


Name	Sed0025965
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Ribonuclease H
Location	LG13: 19103322 .. 19108120 (-)
RNA-Seq Expression	Sed0025965
Synteny	Sed0025965

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTTCAAACCGAAGATCGCTAGTTTCTACCAGCTGCATGCCACCTCGTGGAGACTAATTCTTTGTTAGATTACAGATTGAGAAATTTCTATGTTTCCATGGTACTTACGGTACCTACTCCTTTTAAGCAAAGGCGCACACATACGAGGAAGGAGAGGCACAAGTAGGCACCATGTCAAGGGTCTACTTTTATCGTGTGGGAAGTTGTTTTTGGGGTTTGGGCCTTAGAATAATTAGGAATGCTATAGGGACTTTTCGACAGTAAGTTAGGAATACTATAGGGACTTTTCGACATTTTAAATTCTTATTTCAACATTGTTGTTTCTTAGTAAAAGTAACCAATTAAGGGAACATGTAACAATATCATATATGTTTCCAACCAACCAGGTATACTAAAAGCATTGCAGAATATGTGACATACATAATCTAAATTCATAAATTGTACCTGAGACGAAAGGGCATAGCTCCGGTGATAAAAGCAAATAAACATTTTATCAATATCATTTTCGCTCAATTTATTTTTATTGGACTAAATATCAGTTTAAGTTTAATGAGCTCTAATACTATACTAGATAGTGATGAATAATCTTCCTACCTTATATATGAGATCCTCAAGTTAGAGTGAATATTATAGGGTCGCATTATAATATAACTCTATTTTGATGTGTCTCCTATTTTTATACCTTCCCTCGTAATCATATTGGCAGACTCATGCAACAAGAAAAATCATGATAAGAGTAATCTATGTCTCTACTCAATAAATATTAAGTTCGATAGACAGTGTCTATTGGCTCTTCAGGATTCATAAGATGGAGGACCCATAGGCTCCAGATCTCATCCATAACCTCAATCCATAACTATGTGAATAATGTTGATAGGTATATATTTATTTTAATTCAACAATATTTAGAGGTAAGAAAGTTTTGAAATTGTAACTTTTTAATTACTGAGTCGTACGTAATGTTATTGAAGCACGACCTCTTTTGAAAATGTTAGAAAGGTACATATCAACATGCTCCAGTTGCAACATTCACCTAATAGTCCAATGTTCTCACTTCGACACTCATCCAAAAAAAAAACAACTAAATAACAATATATTTGAATTCATTTGATAACTGTTTTATTTTTTATTTGTGAAATTTAAACTTACCACCACTATTCCAATGATAAAATAAACAGATTCTAAACACTTATTTTGGTTTATGGAATTTAGTTAGTGTTGTAGGAGGATTTTCGGCTGCACAATGCAGTCCGTGTAGGCCCAAAGGCCAGCCCGAGAATGAGGCCCAACAAGGAAACCCGAAAGGCCAGATTGGGCCCGGTCCCGCGAGTCCGATCCTTGGGAGGAGTACTGGACACGTGGGGGGACCCTCACATGCAAGGGTCGGACACGTGTCCGACCCCCACATCCGAGGGTCGGACACGTGTCTGACCCCTACATGTGAGGGTCGGACATGTGTCCGACCCCCGTGCACGTGTGCAGGTGTGGGCTGAACGCGGTCCGGCTCCTGTGCGTGTGTGTGACTACGGGCCGAACGTGCATTCGGCCCGTTTGAGCGTCGTTCGAGGCCCATTCAAGGGAAGGGAGAGACCCATTTCGACTTGGTCGACTCCACCACTTTCCACGGGCGGGAACGACGCACGCGGAAGAGTGATTCTGGTCGTGCAGCGACACCCACTTCCTGAAATCACGTTCGTGGCAAGAAGAACAGGTAACCACACCCTATAAAAGGACTCCCCACCGATGCTAAATTTAAGTAACCTTCGATTTCGAGCTTTGAACCCGACGTATACCGTACTGACTTGAGCATCGGAGTCCACGTGGCCTGTACCACACCGGTGCCCAGTTTACTCTTCTATTTTGCAGGCACGATGTCCCCTTCCTAAAAACAATTCACCGTTGATACCGAGCACCAAGATTTGGCATCAACAGTTGGCGCCGTCTGTGGGGACGATACGTGTTCTACCCAAGGTAAGCCGCGGAACGTCAGAGTTCAGACTGAAGGATGAACAGCGCGAGTCACAGTAATCATGTGAACGATGGGGAATCTGATAATGAGAGAGCCCCTAGAAGGGTACTAGCTAGGCACGAGGAGGCAGAAAACCCTGAGATCCAGCCTGTGGTCGAAATGGAACAGAGACCGGTAATGGAAAACTGGGAGGACCCGAAGGTGGCAGCACTAGAGCGAAAAGTGCAAGAGATGGTCGAGACCATCAATCAACTGCGGAATTTAATCAGCCCATCCGTAGCTATTGCTGCAGTGGGCGGAGATATGCCCCCGGCAAGGGTTCTGCCTCGAAACGAGACAGACCCTCAGGCCAGGGGCGAACCGCGAGTAAGGCCACGACCCCCTCCTAGGGGGGAGCCCACTGCTAGAGAGAAACGCTCAACGCTCGAGAGGTCAGTCAAGACAAGGTCGAATGCGACACGTCAACGTGCGGGTCATGACTTAGAGCCTCGCTCCGAGGCGCCATCGCTTGTGCGCGATCTGGCTAGGGGAAAGGCCCCGGCGGTAGGAGAACCTACCGAGACCACGACACCTCGCCAAAGGTCTGGGGAACGATTAGTTCTTAGGGGCAATGACAGACGAAGGGGGTACCCCGAATCTACCTGCACAGCATCACGAGTGGAAGACTCTCGTTCACATACAAGGCCCGTATCTAGTCGGTACCTTGCCTCTAGGTTAGCTCCGCAAACGACGAAAACGGAGCAAATGCCTCAACCAACGGTTGTAAGGGCGGAAGAGTCAGACGTGGGAACCGACATCCGGGCCCTGATAAATCTCCAAATGAAGGATCTGCGAGACCAGGAGGTCGAAAGCCAACCTTGGGCCGCCGAGCTACGGCAACTCCAAAATCAACTAGGAGACATTCGGAAAGCACAGGACCAGGACGGCCTTGACCTAGACAATCTCGTAGACCAGGTCGACCTGCCCTTCACTGACGAAATTATGGCCGAAGAAGTGCCGCCCAAGTTTAAATTACAGACAATGAAGGCTTACGACGGGTCAAAAGATCCAGTCGATCACCTTGATACTTTTCGGTCGTGGATGGAGCTCCACGAAGTCCGGGATGTTATCAAATGCCGAGCGTTTTCCTTCACCCTTATAGAGCCAGCTCGTCGGTGGTTTCGACAGCTAAAGCGGAAGTCGATCAAGTCCTTTCGAGAGTTGGCCCGTGCCTTCATCACCCAATTCTTAGGGGGACGAGATCAGAAAAAACTCGCTACCCACCTACTAACTGTAAGAAAGAGAAGTCACGAAAGTCTGAGAGAATATGTGGCTCGCTTCAACAACGAGGCGTTGCAGGTAGAAGGGTACACTGATGGGGCAGCCCTTACAACCATTTTCGCAGGGTTGAAGGACGAAAATTTCCTGTGGTCCCTGGGAAAAAAAGGCCCCTACGACCTATGTAGAGGTGCTTACCCATGCTCAAAAGTATGTGAGCGCTGGGGAACTTCTCAAATCTAGGCGCGCACCGGAAGACAAACGGGTATTGACTGATATAGAACGGAAGGTAGATAGAATAGAACTTAATCGTGCAGAAACTCGAAAAAGGCATTTGGATGAACGACACATTAACCGAGAAACGCCTTCTCGCAAGGGATTACCCCCAAGAAAATTTGAAAAATACACTTCTACTGTGGTACCCATAGAACAGATCTTGATGGAGATCCAAGATAAAGAACGACTAAAATGGCCGGCTAAATTGAAAGCAGGGTCTCATCACCGTAACAAGGATAAGTACTGCCTATTCCATCGGGATCATGGGCACGCAACCTCTGACTGTTATGACCTGAAAGAAACCATTGAGGCTCTGATCCAAAAGGTACGGTTAAAGGAATATGTTGAAGATAGGCAAATAGCCATCGAACGTTCGAGTAAGAAGCAGAATGTAGGAGATTCCCCACCGCCGCAAGAGATTCGCACCATCTTAGGTGGTCCAGCAAGAGGCGCCTCAAACAGGAAGAGGAAAGCATGTGCTCGTGAAGCCCGATAGTCACCAAGTCTAGAGGAGGTGCGAATTATGGCAGCAGCAGATGATGTCATCAATGTCCTACCAGCTGATGCGTGTAGGTTGCACCAACCTCACAATGACGCATTGGTGGTGACTCTAACGATAGCCAATATTAAAGTTCGAAGAATATTGGTTGACGGTGGAAGCTCGGCAGACATTCTGTCACTACAAGCATATGATGCTATGAAGCTTGGGCGGGAGAAGTTATCCCCGAGCACCACCCCACTGGTTGGGTTCGGGGGCAGCACTGTATACCCTGAAGGTTGCATCGAGCTCCCAGTAACGTTTGGTGAAGGAGACCACTCGGTGCTTTCCTTCGTCACCTTTCTAGTGGTTCCTGACAGTTCGGCATATAATGCCATCATCGGGAGGCCCACCATTCACCAACTCCGTGCGGTACCGTCAACGTACCACCAACTAATGAAGTTCCCAACCTCAACTGGGATTGGGTTCATACAAGGAGAACAACAAATATCGAGGGAATGTTACCATACTGCTTTGCGAGGGGCAACCAGGTTAACGGATATCCGGATGGTGGAAATGGATCCCCATGATGTCCTCTTGAGAAAGGCCACACCGCACCAAACGAGCACGACACCTAAGGAGGGACGTTGTCTCGATCATTCCAGCCATAGCTCGGAGGACAGTCACCGAGGAGAATCGACCGAACAGTTGGAAAAAGTGCAACTGCTATCCGAGGGGCAAGTGGTACAGATAGGGTCAAGTTTAAGCCCCGAGCACTGGGCGAACCTTATTGCGTTCCTCTAGAACACCAGTGA

mRNA sequence

ATGAGTTTCAAACCGAAGATCGATTTTCGGCTGCACAATGCAGTCCGTGTAGGCCCAAAGGCCAGCCCGAGAATGAGGCCCAACAAGGAAACCCGAAAGGCCAGATTGGGCCCGGTCCCGCGAGTCCGATCCTTGGGAGGAGTACTGGACACGTGGGGGGACCCTCACATGCAAGGGGTACTAGCTAGGCACGAGGAGGCAGAAAACCCTGAGATCCAGCCTGTGGTCGAAATGGAACAGAGACCGGTAATGGAAAACTGGGAGGACCCGAAGGTGGCAGCACTAGAGCGAAAAGTGCAAGAGATGGTCGAGACCATCAATCAACTGCGGAATTTAATCAGCCCATCCGTAGCTATTGCTGCAGTGGGCGGAGATATGCCCCCGGCAAGGGTTCTGCCTCGAAACGAGACAGACCCTCAGGCCAGGGGCGAACCGCGAGTAAGGCCACGACCCCCTCCTAGGGGGGAGCCCACTGCTAGAGAGAAACGCTCAACGCTCGAGAGGTCAGTCAAGACAAGGTCGAATGCGACACGTCAACGTGCGGGTCATGACTTAGAGCCTCGCTCCGAGGCGCCATCGCTTGCCCCTACGACCTATGTAGAGGTGCTTACCCATGCTCAAAAGTATGTGAGCGCTGGGGAACTTCTCAAATCTAGGCGCGCACCGGAAGACAAACGGGGATTACCCCCAAGAAAATTTGAAAAATACACTTCTACTGTGGTACCCATAGAACAGATCTTGATGGAGATCCAAGATAAAGAACGACTAAAATGGCCGGCTAAATTGAAAGCAGGGTCTCATCACCGTAACAAGGATAAGTACTGCCTATTCCATCGGGATCATGGGCACGCAACCTCTGACTGTTATGACCTGAAAGAAACCATTGAGGCTCTGATCCAAAAGGTACGGTTAAAGGAATATGTTGAAGATAGGCAAATAGCCATCGAACGTTCGACTGATGCGTGTAGGTTGCACCAACCTCACAATGACGCATTGGTGGTGACTCTAACGATAGCCAATATTAAAGTTCGAAGAATATTGGTTGACGGTGGAAGCTCGGCAGACATTCTGTCACTACAAGCATATGATGCTATGAAGCTTGGGCGGGAGAAGTTATCCCCGAGCACCACCCCACTGGTTGGGTTCGGGGGCAGCACTGTATACCCTGAAGGTTGCATCGAGCTCCCAGTAACGTTTGGTGAAGGAGACCACTCGGTGCTTTCCTTCTCACCGAGGAGAATCGACCGAACAGTTGGAAAAAGTGCAACTGCTATCCGAGGGGCAAGTGGTACAGATAGGGTCAAGTTTAAGCCCCGAGCACTGGGCGAACCTTATTGCGTTCCTCTAGAACACCAGTGA

Coding sequence (CDS)

ATGAGTTTCAAACCGAAGATCGATTTTCGGCTGCACAATGCAGTCCGTGTAGGCCCAAAGGCCAGCCCGAGAATGAGGCCCAACAAGGAAACCCGAAAGGCCAGATTGGGCCCGGTCCCGCGAGTCCGATCCTTGGGAGGAGTACTGGACACGTGGGGGGACCCTCACATGCAAGGGGTACTAGCTAGGCACGAGGAGGCAGAAAACCCTGAGATCCAGCCTGTGGTCGAAATGGAACAGAGACCGGTAATGGAAAACTGGGAGGACCCGAAGGTGGCAGCACTAGAGCGAAAAGTGCAAGAGATGGTCGAGACCATCAATCAACTGCGGAATTTAATCAGCCCATCCGTAGCTATTGCTGCAGTGGGCGGAGATATGCCCCCGGCAAGGGTTCTGCCTCGAAACGAGACAGACCCTCAGGCCAGGGGCGAACCGCGAGTAAGGCCACGACCCCCTCCTAGGGGGGAGCCCACTGCTAGAGAGAAACGCTCAACGCTCGAGAGGTCAGTCAAGACAAGGTCGAATGCGACACGTCAACGTGCGGGTCATGACTTAGAGCCTCGCTCCGAGGCGCCATCGCTTGCCCCTACGACCTATGTAGAGGTGCTTACCCATGCTCAAAAGTATGTGAGCGCTGGGGAACTTCTCAAATCTAGGCGCGCACCGGAAGACAAACGGGGATTACCCCCAAGAAAATTTGAAAAATACACTTCTACTGTGGTACCCATAGAACAGATCTTGATGGAGATCCAAGATAAAGAACGACTAAAATGGCCGGCTAAATTGAAAGCAGGGTCTCATCACCGTAACAAGGATAAGTACTGCCTATTCCATCGGGATCATGGGCACGCAACCTCTGACTGTTATGACCTGAAAGAAACCATTGAGGCTCTGATCCAAAAGGTACGGTTAAAGGAATATGTTGAAGATAGGCAAATAGCCATCGAACGTTCGACTGATGCGTGTAGGTTGCACCAACCTCACAATGACGCATTGGTGGTGACTCTAACGATAGCCAATATTAAAGTTCGAAGAATATTGGTTGACGGTGGAAGCTCGGCAGACATTCTGTCACTACAAGCATATGATGCTATGAAGCTTGGGCGGGAGAAGTTATCCCCGAGCACCACCCCACTGGTTGGGTTCGGGGGCAGCACTGTATACCCTGAAGGTTGCATCGAGCTCCCAGTAACGTTTGGTGAAGGAGACCACTCGGTGCTTTCCTTCTCACCGAGGAGAATCGACCGAACAGTTGGAAAAAGTGCAACTGCTATCCGAGGGGCAAGTGGTACAGATAGGGTCAAGTTTAAGCCCCGAGCACTGGGCGAACCTTATTGCGTTCCTCTAGAACACCAGTGA

Protein sequence

MSFKPKIDFRLHNAVRVGPKASPRMRPNKETRKARLGPVPRVRSLGGVLDTWGDPHMQGVLARHEEAENPEIQPVVEMEQRPVMENWEDPKVAALERKVQEMVETINQLRNLISPSVAIAAVGGDMPPARVLPRNETDPQARGEPRVRPRPPPRGEPTAREKRSTLERSVKTRSNATRQRAGHDLEPRSEAPSLAPTTYVEVLTHAQKYVSAGELLKSRRAPEDKRGLPPRKFEKYTSTVVPIEQILMEIQDKERLKWPAKLKAGSHHRNKDKYCLFHRDHGHATSDCYDLKETIEALIQKVRLKEYVEDRQIAIERSTDACRLHQPHNDALVVTLTIANIKVRRILVDGGSSADILSLQAYDAMKLGREKLSPSTTPLVGFGGSTVYPEGCIELPVTFGEGDHSVLSFSPRRIDRTVGKSATAIRGASGTDRVKFKPRALGEPYCVPLEHQ

Homology

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BLAST of Sed0025965 vs. NCBI nr
Match: XP_022158830.1 (uncharacterized protein LOC111025293 [Momordica charantia])

HSP 1 Score: 217.2 bits (552), Expect = 2.8e-52
Identity = 129/287 (44.95%), Postives = 153/287 (53.31%), Query Frame = 0


Query: 196 PTTYVEVLTHAQKYVSAGELLKSRRAPEDKR-------------------------GLPP 255
           P T+ E L+ AQ+Y+SAGE   S+R P+ KR                           PP
Sbjct: 334 PNTFSEALSRAQRYMSAGEFFYSKREPDGKRTDPKRERSGDKPQGSRWEKRDRSSQKDPP 393

Query: 256 RKFEKYTSTVVPIEQILMEIQDKERLKWPAKLKAGSHHRNKDKYCLFHRDHGHATSDCYD 315
           RKFEKYT T VPIEQ+LMEI+D+  LKWP ++KA S  R+K +YCLFHRDHGHAT DC+D
Sbjct: 394 RKFEKYTPTTVPIEQVLMEIKDQRLLKWPERMKASSAKRSKGRYCLFHRDHGHATQDCFD 453

Query: 316 LKETIEALIQKVRLKEYVED---------------------------------------- 375
           LKE +E LI++  LKEYVE+                                        
Sbjct: 454 LKEEVEGLIRRGYLKEYVEEPKATQNGESDKSPAREIRTIMGGPIERESGRKRKADVREA 513

Query: 376 ----------------RQIAIERSTD-ACRLHQPHNDALVVTLTIANIKVRRILVDGGSS 401
                           R + IE S D A  L  PHNDALV+ L IAN+KV R+LVDGGSS
Sbjct: 514 RTSREQNEVYHAYTTNRPVTIEFSEDEATHLLHPHNDALVIXLKIANVKVHRVLVDGGSS 573

[Close]

BLAST of Sed0025965 vs. NCBI nr
Match: XP_022156748.1 (uncharacterized protein LOC111023587 [Momordica charantia])

HSP 1 Score: 193.7 bits (491), Expect = 3.3e-45
Identity = 105/198 (53.03%), Postives = 125/198 (63.13%), Query Frame = 0


Query: 236 YTSTVVPIEQILMEIQDKERLKWPAKLKAGSHHRNKDKYCLFHRDHGHATSDCYDLKETI 295
           YT T +P+EQ+LMEI+D+  LKWP ++KA S  R+K +YCLFHRDH HAT DC+DLKE +
Sbjct: 2   YTLTTIPLEQVLMEIKDQRLLKWPERMKAPSTKRSKGRYCLFHRDHDHATQDCFDLKEEV 61

Query: 296 EALIQKVRLKE--------------------------YVEDRQIAIERSTD-ACRLHQPH 355
           E LI++  LKE                          Y+ DR + IE S D A +L   H
Sbjct: 62  EGLIRRGYLKEERIWEKKKADVREARANREQNEVYHAYITDRPVTIEFSEDEATQLFHSH 121

Query: 356 NDALVVTLTIANIKVRRILVDGGSSADILSLQAYDAMKLGREKLSPSTTPLVGFGGSTVY 407
           NDALV+TL IAN+KV RILVDGGSSADI+S  AY AM L  + L  S  PLVGFGG  V 
Sbjct: 122 NDALVITLKIANVKVHRILVDGGSSADIISWTAYKAMDLEEKVLKSSPAPLVGFGGERVI 181

[Close]

BLAST of Sed0025965 vs. NCBI nr
Match: XP_022155873.1 (uncharacterized protein LOC111022886 [Momordica charantia])

HSP 1 Score: 189.5 bits (480), Expect = 6.3e-44
Identity = 107/198 (54.04%), Postives = 125/198 (63.13%), Query Frame = 0


Query: 235 KYTSTVVPIEQILMEIQDKERLKWPAKLKAGSHHRNKDKYCLFHRDHGHATSDCYDLKET 294
           K T T V +EQ+LMEI+D+  LKWP ++KA    R+K +Y LFHRDHGHAT DC+DLKE 
Sbjct: 4   KDTPTTVSLEQVLMEIKDQRLLKWPERMKAPPSKRSKGQYWLFHRDHGHATQDCFDLKEE 63

Query: 295 IEALIQKVRLKEYVED---------------RQI---------AIERSTD-ACRLHQPHN 354
           +E LI+   LKEYVED               R+I          +E S D A  L  PHN
Sbjct: 64  VEGLIRSGYLKEYVEDPKATQNGENDSNSPVREIRTIMEEQPAKLEFSEDEATHLFHPHN 123

Query: 355 DALVVTLTIANIKVRRILVDGGSSADILSLQAYDAMKLGREKLSPSTTPLVGFGGSTVYP 408
           DALV+TL IAN KV RILVDGGSS  I+SL AY AM LG + L  S  PLVGFGG  V P
Sbjct: 124 DALVITLKIANAKVHRILVDGGSSTYIISLTAYKAMDLGEKALKSSPVPLVGFGGERVIP 183

[Close]

BLAST of Sed0025965 vs. NCBI nr
Match: XP_022138036.1 (uncharacterized protein LOC111009292 [Momordica charantia])

HSP 1 Score: 177.2 bits (448), Expect = 3.2e-40
Identity = 99/174 (56.90%), Postives = 117/174 (67.24%), Query Frame = 0


Query: 248 MEIQDKERLKWPAKLKAGSHHRNKDKYCLFHRDHGHATSDCYDLKETIEALIQKVRLKEY 307
           MEI+D+  LKWP ++KA    R+K +YCLFH DHGHAT DC+DLKE +E LI++  LKEY
Sbjct: 1   MEIKDQRLLKWPERMKALPSKRSKGRYCLFHLDHGHATQDCFDLKEEVEGLIRRGYLKEY 60

Query: 308 VED-----------RQIAIERSTD-ACRLHQPHNDALVVTLTIANIKVRRILVDGGSSAD 367
           +ED           +   IE S D A  L  PHNDALV+TL IAN KV +ILVDGGSSA+
Sbjct: 61  MEDPKATQNGENDKQSTKIEFSKDEATHLLHPHNDALVITLKIANAKVHQILVDGGSSAN 120

Query: 368 ILSLQAYDAMKLGREKLSPSTTPLVGFGGSTVYPEGCIELPVTFGEGDHSVLSF 410
           I+SL AY AM LG   L  ST PLVGFGG  V PEG IEL VTFG G  + L +
Sbjct: 121 IISLAAYKAMDLG-VVLKSSTAPLVGFGGERVIPEGRIELSVTFGSGPKASLKW 173

[Close]

BLAST of Sed0025965 vs. NCBI nr
Match: XP_022150858.1 (uncharacterized protein LOC111018902 [Momordica charantia])

HSP 1 Score: 176.8 bits (447), Expect = 4.2e-40
Identity = 93/190 (48.95%), Postives = 113/190 (59.47%), Query Frame = 0


Query: 240 VVPIEQILMEIQDKERLKWPAKLKAGSHHRNKDKYCLFHRDHGHATSDCYDLKETIEALI 299
           +VP+EQ+ +EI+D+  LKWP ++KA    R K +YC FH DH HAT DC+DLKE +E LI
Sbjct: 1   MVPLEQVFVEIKDQRLLKWPERMKAPPSKRGKGRYCPFHLDHSHATQDCFDLKEEVEGLI 60

Query: 300 QKVRLKEYVEDRQIAIER-----------------------STDACRLHQPHNDALVVTL 359
           Q+  LKEYV+D +    +                         +   +  PHNDALV+ L
Sbjct: 61  QRGYLKEYVKDPKATQNKRERQAYKIYHAFVEEQPTKIEFLEDEVTHIFHPHNDALVINL 120

Query: 360 TIANIKVRRILVDGGSSADILSLQAYDAMKLGREKLSPSTTPLVGFGGSTVYPEGCIELP 407
            IAN KV  ILVDGGSS DI+SL AY  M LG   L  S  PLVGFGG  V PEG IELP
Sbjct: 121 KIANAKVHWILVDGGSSPDIISLTAYKTMDLGERGLKSSPAPLVGFGGEWVIPEGRIELP 180

[Close]

BLAST of Sed0025965 vs. ExPASy TrEMBL
Match: A0A6J1DWY0 (uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025293 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 1.0e-52
Identity = 130/287 (45.30%), Postives = 153/287 (53.31%), Query Frame = 0


Query: 196 PTTYVEVLTHAQKYVSAGELLKSRRAPEDKR-------------------------GLPP 255
           P T+ E L+ AQ+Y+SAGE   S+R P+ KR                           PP
Sbjct: 334 PNTFSEALSRAQRYMSAGEFFYSKREPDGKRTDPKRERSGDKPQGSRWEKRDRSSQKDPP 393

Query: 256 RKFEKYTSTVVPIEQILMEIQDKERLKWPAKLKAGSHHRNKDKYCLFHRDHGHATSDCYD 315
           RKFEKYT T VPIEQ+LMEI+D+  LKWP ++KA S  R+K +YCLFHRDHGHAT DC+D
Sbjct: 394 RKFEKYTPTTVPIEQVLMEIKDQRLLKWPERMKASSAKRSKGRYCLFHRDHGHATQDCFD 453

Query: 316 LKETIEALIQKVRLKEYVED---------------------------------------- 375
           LKE +E LI++  LKEYVE+                                        
Sbjct: 454 LKEEVEGLIRRGYLKEYVEEPKATQNGESDKSPAREIRTIMGGPIERESGRKRKADVREA 513

Query: 376 ----------------RQIAIERSTD-ACRLHQPHNDALVVTLTIANIKVRRILVDGGSS 401
                           R + IE S D A  L  PHNDALV+ L IAN+KV R+LVDGGSS
Sbjct: 514 RTSREQNEVYHAYTTNRPVTIEFSEDEATHLLHPHNDALVIXLKIANVKVHRVLVDGGSS 573

[Close]

BLAST of Sed0025965 vs. ExPASy TrEMBL
Match: A0A6J1DRG9 (uncharacterized protein LOC111023587 OS=Momordica charantia OX=3673 GN=LOC111023587 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.6e-45
Identity = 105/198 (53.03%), Postives = 125/198 (63.13%), Query Frame = 0


Query: 236 YTSTVVPIEQILMEIQDKERLKWPAKLKAGSHHRNKDKYCLFHRDHGHATSDCYDLKETI 295
           YT T +P+EQ+LMEI+D+  LKWP ++KA S  R+K +YCLFHRDH HAT DC+DLKE +
Sbjct: 2   YTLTTIPLEQVLMEIKDQRLLKWPERMKAPSTKRSKGRYCLFHRDHDHATQDCFDLKEEV 61

Query: 296 EALIQKVRLKE--------------------------YVEDRQIAIERSTD-ACRLHQPH 355
           E LI++  LKE                          Y+ DR + IE S D A +L   H
Sbjct: 62  EGLIRRGYLKEERIWEKKKADVREARANREQNEVYHAYITDRPVTIEFSEDEATQLFHSH 121

Query: 356 NDALVVTLTIANIKVRRILVDGGSSADILSLQAYDAMKLGREKLSPSTTPLVGFGGSTVY 407
           NDALV+TL IAN+KV RILVDGGSSADI+S  AY AM L  + L  S  PLVGFGG  V 
Sbjct: 122 NDALVITLKIANVKVHRILVDGGSSADIISWTAYKAMDLEEKVLKSSPAPLVGFGGERVI 181

[Close]

BLAST of Sed0025965 vs. ExPASy TrEMBL
Match: A0A6J1DP33 (uncharacterized protein LOC111022886 OS=Momordica charantia OX=3673 GN=LOC111022886 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 3.1e-44
Identity = 107/198 (54.04%), Postives = 125/198 (63.13%), Query Frame = 0


Query: 235 KYTSTVVPIEQILMEIQDKERLKWPAKLKAGSHHRNKDKYCLFHRDHGHATSDCYDLKET 294
           K T T V +EQ+LMEI+D+  LKWP ++KA    R+K +Y LFHRDHGHAT DC+DLKE 
Sbjct: 4   KDTPTTVSLEQVLMEIKDQRLLKWPERMKAPPSKRSKGQYWLFHRDHGHATQDCFDLKEE 63

Query: 295 IEALIQKVRLKEYVED---------------RQI---------AIERSTD-ACRLHQPHN 354
           +E LI+   LKEYVED               R+I          +E S D A  L  PHN
Sbjct: 64  VEGLIRSGYLKEYVEDPKATQNGENDSNSPVREIRTIMEEQPAKLEFSEDEATHLFHPHN 123

Query: 355 DALVVTLTIANIKVRRILVDGGSSADILSLQAYDAMKLGREKLSPSTTPLVGFGGSTVYP 408
           DALV+TL IAN KV RILVDGGSS  I+SL AY AM LG + L  S  PLVGFGG  V P
Sbjct: 124 DALVITLKIANAKVHRILVDGGSSTYIISLTAYKAMDLGEKALKSSPVPLVGFGGERVIP 183

[Close]

BLAST of Sed0025965 vs. ExPASy TrEMBL
Match: A0A6J1C8I1 (uncharacterized protein LOC111009292 OS=Momordica charantia OX=3673 GN=LOC111009292 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.6e-40
Identity = 99/174 (56.90%), Postives = 117/174 (67.24%), Query Frame = 0


Query: 248 MEIQDKERLKWPAKLKAGSHHRNKDKYCLFHRDHGHATSDCYDLKETIEALIQKVRLKEY 307
           MEI+D+  LKWP ++KA    R+K +YCLFH DHGHAT DC+DLKE +E LI++  LKEY
Sbjct: 1   MEIKDQRLLKWPERMKALPSKRSKGRYCLFHLDHGHATQDCFDLKEEVEGLIRRGYLKEY 60

Query: 308 VED-----------RQIAIERSTD-ACRLHQPHNDALVVTLTIANIKVRRILVDGGSSAD 367
           +ED           +   IE S D A  L  PHNDALV+TL IAN KV +ILVDGGSSA+
Sbjct: 61  MEDPKATQNGENDKQSTKIEFSKDEATHLLHPHNDALVITLKIANAKVHQILVDGGSSAN 120

Query: 368 ILSLQAYDAMKLGREKLSPSTTPLVGFGGSTVYPEGCIELPVTFGEGDHSVLSF 410
           I+SL AY AM LG   L  ST PLVGFGG  V PEG IEL VTFG G  + L +
Sbjct: 121 IISLAAYKAMDLG-VVLKSSTAPLVGFGGERVIPEGRIELSVTFGSGPKASLKW 173

[Close]

BLAST of Sed0025965 vs. ExPASy TrEMBL
Match: A0A6J1DAK4 (uncharacterized protein LOC111018902 OS=Momordica charantia OX=3673 GN=LOC111018902 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 2.1e-40
Identity = 93/190 (48.95%), Postives = 113/190 (59.47%), Query Frame = 0


Query: 240 VVPIEQILMEIQDKERLKWPAKLKAGSHHRNKDKYCLFHRDHGHATSDCYDLKETIEALI 299
           +VP+EQ+ +EI+D+  LKWP ++KA    R K +YC FH DH HAT DC+DLKE +E LI
Sbjct: 1   MVPLEQVFVEIKDQRLLKWPERMKAPPSKRGKGRYCPFHLDHSHATQDCFDLKEEVEGLI 60

Query: 300 QKVRLKEYVEDRQIAIER-----------------------STDACRLHQPHNDALVVTL 359
           Q+  LKEYV+D +    +                         +   +  PHNDALV+ L
Sbjct: 61  QRGYLKEYVKDPKATQNKRERQAYKIYHAFVEEQPTKIEFLEDEVTHIFHPHNDALVINL 120

Query: 360 TIANIKVRRILVDGGSSADILSLQAYDAMKLGREKLSPSTTPLVGFGGSTVYPEGCIELP 407
            IAN KV  ILVDGGSS DI+SL AY  M LG   L  S  PLVGFGG  V PEG IELP
Sbjct: 121 KIANAKVHWILVDGGSSPDIISLTAYKTMDLGERGLKSSPAPLVGFGGEWVIPEGRIELP 180

The following BLAST results are available for this feature:

BLAST of Sed0025965 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158830.1	2.8e-52	44.95	uncharacterized protein LOC111025293 [Momordica charantia]	[more]
XP_022156748.1	3.3e-45	53.03	uncharacterized protein LOC111023587 [Momordica charantia]	[more]
XP_022155873.1	6.3e-44	54.04	uncharacterized protein LOC111022886 [Momordica charantia]	[more]
XP_022138036.1	3.2e-40	56.90	uncharacterized protein LOC111009292 [Momordica charantia]	[more]
XP_022150858.1	4.2e-40	48.95	uncharacterized protein LOC111018902 [Momordica charantia]	[more]

BLAST of Sed0025965 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0025965 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DWY0	1.0e-52	45.30	uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DRG9	1.6e-45	53.03	uncharacterized protein LOC111023587 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1DP33	3.1e-44	54.04	uncharacterized protein LOC111022886 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1C8I1	1.6e-40	56.90	uncharacterized protein LOC111009292 OS=Momordica charantia OX=3673 GN=LOC111009...	[more]
A0A6J1DAK4	2.1e-40	48.95	uncharacterized protein LOC111018902 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]

BLAST of Sed0025965 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 92..112
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..187
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..193
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 334..406 e-value: 7.99704E-7 score: 45.02
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 313..415 e-value: 1.9E-5 score: 26.3

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0025965.1	Sed0025965.1	mRNA