Sed0025917 (gene) Chayote v1

Overview
NameSed0025917
Typegene
OrganismSechium edule (Chayote v1)
DescriptionGlutamate racemase
LocationLG10: 36348390 .. 36353019 (+)
RNA-Seq ExpressionSed0025917
SyntenySed0025917
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GATTTTCTTGTGAAGAAACTTCTCACAAGTTGTTTTGGGATTTGGATTTTCTCGGAAAATTATTTCTTAGAAAGCTGTTTGGCTTTGGATTTTCCAGGAAAGTTTGCTGATTTCCTCAGTTGTATGGCAAAGCCTTCTTTGCAGGCAAATGCATTGATTTTTAGGTAAAATAATGTGTTGCCTCTTGAGTCCCATCGTTTAATTTTGCATTTTGTTTTTTCACTTTTGAAAATCAAATCTATATGGAGTGTTTGTTTGTCATATTTAGAAAAGATCTACCGAATGGGTAAGTGGCGCAATAGTTTTATTGTTTGGTTGTAAACCAGTTCAATACCAGTGTCACAAGTTCGAGCCCGAAAATCGGTATTTGGTCCCCTAAGTATTTATCAAAATAATTTATTTGTAACCACTCATTTTTAATCTACAACTAAATAAAGTTTTCACTCTAACTCATCTATAAAAAAACACACACACACATCTAAACGAGTTTTTTACATTTAACTCTCAATTTTTAACTATTCAAATTAATTTCTCATCAAAACCTCATCTAAACACCTCATAAGGAAAGGAAATGAAGGAAAATAAAATATTGTTGATGCAAATTGATTTTTTTGTTTGGTTATCAACTACTCTTCATCTACAAAAAAAAAGCCTCATCTAATTCTTACTTCATTTTAAAAAAAAAAAACAAACAAACCAGTTAATTTTAAAAAAAATTAATTTTTTGTTTGATTTTTGAAAATTATGCTTCTAAATATTAATTTCACCATTAAATTTTAGGGAATTTTGCATGTATAACAAAAAAGTAAAATATTTTCATTTATAACACATAATCAAAATTAATTCAGTTGTAGCAGAAAATTCAAATTGAGTTCCACTAATTGAGTTCTATTAGTGATAAAATTCAATCAATGACAAATTCATTCTATCACTACTTGATTTTTCTATTAGTGACAGAAATCCAAATTGAATTCTATCACTAGTTGAGTGATAAAAAATAATATGTTATAGATGAATTATTTTAAAAATTCTGCTACAAATATAACAGGGAGAATGTGCTGATGGTAAATTTTCTAAATTGTATTATTTTGGAATTCATTAAAATTTAGCCAATGTTTGAAAAAAAAAACGTAAAAGAGTTTTTTATTATTATTATTTTTTATTTACAATTTTTCTAAGATTTTAATGGTTATTTGATAGAGATTAAAATTATAGTGGTGAAATGGACAGAAACCAAAATTCAATTCTCCAAAACCAAAAACCATTAAATTCAATTCTCCAAAATTTTGATATGGAAAAAAACGTACAAAGTCCAAAAAATATATTTTTTAAATTTTGATATAGAATTTTCAAGTGTTTGATCAAGACATTTAAACAATTTGTATGGAAATAGTGACATTGACTTTTGTTTGATTAGCTATATTTTAAATCAACTTCAATAATTTATATAGAGTTGGTGGTCTTAAAAAATGATACTACTTACAAAGAACATTACAATGATTATGGGATGTTTATTTGACATATTCAGGTAGTTTTTAGTAGGGGTGTTCAAACAATCCGAAATTCGAACAACCCAGACCAACCCAACCCAAATTGACGGGTTGGGTTAAATATATTTTTAGGTTGGGTTGGGTTCAAAATCATAAAATATTCATGAGTTGGGTTGGGTTAAAGGTTGACCTAAAATTAACCCAACCCAACTCGACCAACCCAAAATTGTTATTTAGTTTAAAAATATATATATTTTTTTTACTATAACATAATTATATATGCGTATATATTTTTTTATTTAATTATTATTGTTAGACTTTTTATTTCTCATAATCTTTAATATTTTTTCAAATCTTTATAATTTATATGTCATGATAAATATATAGTCAAATTATGTAAAACTCTTTGTTGGTTTTAATTATATATTTGTTTTATAGAAGTCGAATTATGTTATCTATTTTTTTTTGTTTTAGTTAACTATTTGTTTTATGTTTTATAGTTGAAATCTTCTATATGAACCATGATTGTATATTTATATTCATTTCATTAATTTGATTGAAGATTATATTTTGTTTATACATATGATGTATGACTAATTTGATAAAAGATATTTATAATTATGATTTATTATTGAACCTGATGACTCAACTCAACCCAACCCAAAAATATAAGGGTTGGGTTGGGTTGGATTGTCTCTTTAATTAGGTTGGGTTGGGTTGGAAAAATGACCAACCCGAAATGTTGGGTTGGGTTGAAAACCTCTCTAACCCAACCCATGCTCACCTTCTAGTTTTTAGGTTAAGGAGTTATATTGAGTAGTTAAAAATCGAGAGTTGTGTCAAAAACTCGTTTGAATAATGTAGTTTTTGTGTGGATGAGTTATAATCAAAACCTTGTTTGGATGTAGATTTAAAATGAGTAGTTATTTTTAGTAGTTAAAAAATAAATGATTAAAAATGAGTGGTTAAAAATAAGTTATTTTGATTTATTTGAAATGAATGATTAAAAATGAGTGGTTAGAAATGAGAATTATTTTCAAAAGTAAAATGGAAGAGAAGTTGGTAAAAACTCGTTTGGACGTAGATTTTCGAGAAAAAGTTAATAAATCTTAATCCTAAATCCTAGCTAAAATCGTCAAACAAACCGCCCCTATAGGGGATGTTGAGAAAATAATATTGAATTAAAAAAAAAAATTAACCAAATATAATTATCTCAACCTGTCGTATGTTTACATTATTATTTAATTCTTTGTGTGTTTCTATTGGTTTAAAAAGTGGTTGTGGAATGAAACAGTACTCTTTGGGTAAAAGAAATTAGTTGTGGGGAATAAGAAGCCAATGAGAAATTGGTTGGAAAAAGAGAGTAAAATGGGAAAGATGGACCTTTTTTCCTACTTTCTTAAAATATTGCTTAAAACTTTCTTCAACATACTTGTATGATTATGCTAGGCTAAGTGCTTTTAGGATTTGTTTTTTTAAGTACATATCGAGGGAGGAGGGATAAATATCGATTATCAAGATCGAATATGTGACGCTAGTGTTGAATTAATTTATAACCAAATAATGAAACTATTGCATCACTGATCCATTTGAATTAGTATTTAGGATTGCTAATAGGACTTTTTGTTAGGATTAAAGTAGTTCCCACTCAAAATTCTAATGCTTTGAGCAATAATGAAAGTATTTTTTTTAAAGAAAAAGTTGATACTTTTTAAATTGTTAATAGTTGTGGTTAGTGTGGTGCTGAGATCTTTAAATTCTCTACATTTAAATGTTACTGTTTATTATGGGTATAGGCTCCATAACTTTGTTTTTTTTTATCATCATTCAAAATGTCTCATATCAATGGATTTGTTGTCTCTTTCTTATATATCCAAGACTTTCCACTTAATTTAGTAAAATATGAGATCTTGTTTAGATTTATTACACCAAGTCTTCCTTTCTTTCATGATGATGGTTACAATAAATTAAACTCGTCATCTAGTAATTATTGATGACTTCTTAACTATTAGGTCAATCCATTAGGTACCTCTAAAAGTAAAGAACTATTTCTCATATTTTTCCAAATTATATAAAAGAAACTTTAACTTTTTAATTTATAAAAATCAAAATTTCATTTCATAATCATTTCACTTTACTGTTTTTAAAAGTTAAACTTGTTTTAATTTAAAATCTATATCATTTTTTTAAAACCATCTTCCACTCACGAATTAGCATTTGAATCCTTATCAAATTATTAAAATAAACTTTTGGAAGCAATTTTTTTTCTTTTGAAAACTTGGCCTGGTTGACATCAAACCAAGAAAATTACAAATTGTAGTTAGCTTATTAAAAAAAAAACAAAAGAAAATAGTGTGTTATCTATATATGATCGTCTAGGTTAAATTGCATATACCTCGACTATTGTTACCAGATATAGTATTCAATTTTACAACATTTGGGTGTTCAGGAAATTTGTGGCGAAATAAGAATTCATTACTTCTTAATTACTTAAATATCTCTTAGCATCTAGATGTTTTGTAAGATCGAACTTATAGCTCTTTTTTCGTTTTTTTTATTAGAAGTTCTAAGAAGTTGTATTTCAGGAAAGTGAAACAAATGAGGTGCCAATTTAGCAGCCTTGTAAATGGCTCACATCAAATAGACGAGACAGATGAAACAGAGCCATTGTCCTACAATTCTTCAACTTGGGTTCCCCATCCTCGCACTGGAATATACTTTCCTCAGGGTCATGAGTGGGTCATGAAAGATGTCCCTGAAAATGCAGCCTCGTTCTCTCGTGTTTGCTGGTTTCGGGATTCCGATGGCGTCGATGACCTGAGCCCCGACACCGACCCGACCTCCTGGAACCCTCGGTTCGCCGGCTCTTTCTTTCGTCGAGAGTGATCCACGCGGAAGATCAATGGAACAGTAAACCAAATGTGTTCAAGCGAGTTTGGTGTTGGAGTGTGGATGGCTAATGACCAAATTGGCCTTTGAATAATGTCAGAAATGTAATGTTATATTCCGGGTAGATTGTAAATATAACATAATAAAGGGAAGAAAATTGTAATACTAAATTTATGGTAATCTATCCGATTAAAACTTTGGAATCTCATAATAATTCAAAATAATATGAGGAGATTTTTCATGAACCATGC

mRNA sequence

GATTTTCTTGTGAAGAAACTTCTCACAAGTTGTTTTGGGATTTGGATTTTCTCGGAAAATTATTTCTTAGAAAGCTGTTTGGCTTTGGATTTTCCAGGAAAGTTTGCTGATTTCCTCAGTTGTATGGCAAAGCCTTCTTTGCAGGCAAATGCATTGATTTTTAGGAAAGTGAAACAAATGAGGTGCCAATTTAGCAGCCTTGTAAATGGCTCACATCAAATAGACGAGACAGATGAAACAGAGCCATTGTCCTACAATTCTTCAACTTGGGTTCCCCATCCTCGCACTGGAATATACTTTCCTCAGGGTCATGAGTGGGTCATGAAAGATGTCCCTGAAAATGCAGCCTCGTTCTCTCGTGTTTGCTGGTTTCGGGATTCCGATGGCGTCGATGACCTGAGCCCCGACACCGACCCGACCTCCTGGAACCCTCGGTTCGCCGGCTCTTTCTTTCGTCGAGAGTGATCCACGCGGAAGATCAATGGAACAGTAAACCAAATGTGTTCAAGCGAGTTTGGTGTTGGAGTGTGGATGGCTAATGACCAAATTGGCCTTTGAATAATGTCAGAAATGTAATGTTATATTCCGGGTAGATTGTAAATATAACATAATAAAGGGAAGAAAATTGTAATACTAAATTTATGGTAATCTATCCGATTAAAACTTTGGAATCTCATAATAATTCAAAATAATATGAGGAGATTTTTCATGAACCATGC

Coding sequence (CDS)

ATGGCAAAGCCTTCTTTGCAGGCAAATGCATTGATTTTTAGGAAAGTGAAACAAATGAGGTGCCAATTTAGCAGCCTTGTAAATGGCTCACATCAAATAGACGAGACAGATGAAACAGAGCCATTGTCCTACAATTCTTCAACTTGGGTTCCCCATCCTCGCACTGGAATATACTTTCCTCAGGGTCATGAGTGGGTCATGAAAGATGTCCCTGAAAATGCAGCCTCGTTCTCTCGTGTTTGCTGGTTTCGGGATTCCGATGGCGTCGATGACCTGAGCCCCGACACCGACCCGACCTCCTGGAACCCTCGGTTCGCCGGCTCTTTCTTTCGTCGAGAGTGA

Protein sequence

MAKPSLQANALIFRKVKQMRCQFSSLVNGSHQIDETDETEPLSYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRVCWFRDSDGVDDLSPDTDPTSWNPRFAGSFFRRE
Homology
[Close]
BLAST of Sed0025917 vs. NCBI nr
Match: XP_022989019.1 (uncharacterized protein LOC111486209 [Cucurbita maxima])

HSP 1 Score: 171.4 bits (433), Expect = 4.4e-39
Identity = 85/106 (80.19%), Postives = 91/106 (85.85%), Query Frame = 0 

Query: 1   MAKPSLQANALIFRKVKQMRCQFSSLVNGSHQIDETDETEPLSYNSSTWVPHPRTGIYFP 60
           MA+ S+QANAL+FRKVKQ+R QFSSL N SH  +ET ETEPLSYNSSTWVPHPRTGIYFP
Sbjct: 1   MARTSVQANALLFRKVKQLRRQFSSLANSSHNKEET-ETEPLSYNSSTWVPHPRTGIYFP 60

Query: 61  QGHEWVMKDVPENAASFSRVCWFRDSDGVDDLSPDTDPTSWNPRFA 107
           QGHEWVMKDVPENAASFS V WFRD DGVDDL+PDT P S  PR A
Sbjct: 61  QGHEWVMKDVPENAASFSPVFWFRDFDGVDDLNPDTHP-SPGPRLA 104

[Close]
BLAST of Sed0025917 vs. NCBI nr
Match: XP_023531513.1 (uncharacterized protein LOC111793725 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 171.4 bits (433), Expect = 4.4e-39
Identity = 85/106 (80.19%), Postives = 91/106 (85.85%), Query Frame = 0 

Query: 1   MAKPSLQANALIFRKVKQMRCQFSSLVNGSHQIDETDETEPLSYNSSTWVPHPRTGIYFP 60
           MA+ S+QANAL+FRKVKQ+R QFSSL N SH  +ET ETEPLSYNSSTWVPHPRTGIYFP
Sbjct: 1   MARTSVQANALLFRKVKQLRRQFSSLANSSHNKEET-ETEPLSYNSSTWVPHPRTGIYFP 60

Query: 61  QGHEWVMKDVPENAASFSRVCWFRDSDGVDDLSPDTDPTSWNPRFA 107
           QGHEWVMKDVPENAASFS V WFRD DGVDDL+PDT P S  PR A
Sbjct: 61  QGHEWVMKDVPENAASFSPVFWFRDFDGVDDLNPDTHP-SPGPRLA 104

[Close]
BLAST of Sed0025917 vs. NCBI nr
Match: KAG6588707.1 (hypothetical protein SDJN03_17272, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 169.5 bits (428), Expect = 1.7e-38
Identity = 84/106 (79.25%), Postives = 90/106 (84.91%), Query Frame = 0 

Query: 1   MAKPSLQANALIFRKVKQMRCQFSSLVNGSHQIDETDETEPLSYNSSTWVPHPRTGIYFP 60
           MA+ S+QANAL+FRKVKQ+R QFSSL N SH  +ET ETEPLSYNSSTWVPHPRTGIYFP
Sbjct: 1   MARTSVQANALLFRKVKQLRRQFSSLANSSHNKEET-ETEPLSYNSSTWVPHPRTGIYFP 60

Query: 61  QGHEWVMKDVPENAASFSRVCWFRDSDGVDDLSPDTDPTSWNPRFA 107
           QGHEWVMKDVPENAASFS V WFRD DGVDDL+PD  P S  PR A
Sbjct: 61  QGHEWVMKDVPENAASFSPVFWFRDFDGVDDLNPDAHP-SPGPRLA 104

[Close]
BLAST of Sed0025917 vs. NCBI nr
Match: XP_022927901.1 (uncharacterized protein LOC111434665 [Cucurbita moschata])

HSP 1 Score: 167.5 bits (423), Expect = 6.4e-38
Identity = 83/106 (78.30%), Postives = 89/106 (83.96%), Query Frame = 0 

Query: 1   MAKPSLQANALIFRKVKQMRCQFSSLVNGSHQIDETDETEPLSYNSSTWVPHPRTGIYFP 60
           MA+ S+QANAL+FR VKQ+R QFSSL N SH  +ET ETEPLSYNSSTWVPHPRTGIYFP
Sbjct: 44  MARTSVQANALLFRNVKQLRRQFSSLANSSHNKEET-ETEPLSYNSSTWVPHPRTGIYFP 103

Query: 61  QGHEWVMKDVPENAASFSRVCWFRDSDGVDDLSPDTDPTSWNPRFA 107
           QGHEWVMKDVPENAASFS V WFRD DGVDDL+PD  P S  PR A
Sbjct: 104 QGHEWVMKDVPENAASFSPVFWFRDFDGVDDLNPDAHP-SPGPRLA 147

[Close]
BLAST of Sed0025917 vs. NCBI nr
Match: XP_022148740.1 (uncharacterized protein LOC111017332 [Momordica charantia])

HSP 1 Score: 152.1 bits (383), Expect = 2.8e-33
Identity = 75/110 (68.18%), Postives = 87/110 (79.09%), Query Frame = 0 

Query: 5   SLQANALIFRKVKQMRCQFSSLVNGS----HQIDETD-ETEPLSYNSSTWVPHPRTGIYF 64
           +++ANA++ R++KQ+R QFSS    S      + E D ETEP  YNSSTWVPHPRTGIYF
Sbjct: 48  AVKANAILLRRMKQLRRQFSSFAMESKAKEEALQEEDIETEPWPYNSSTWVPHPRTGIYF 107

Query: 65  PQGHEWVMKDVPENAASFSRVCWFRDSDGVDDLSPDTDPTSWNPRFAGSF 110
           PQGHEWVMKDVPENAASFSRVCWFRDSDGVDD +PD +P S  PRFA +F
Sbjct: 108 PQGHEWVMKDVPENAASFSRVCWFRDSDGVDDPNPDQNP-SVGPRFAAAF 156

[Close]
BLAST of Sed0025917 vs. ExPASy TrEMBL
Match: A0A6J1JN70 (uncharacterized protein LOC111486209 OS=Cucurbita maxima OX=3661 GN=LOC111486209 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.2e-39
Identity = 85/106 (80.19%), Postives = 91/106 (85.85%), Query Frame = 0 

Query: 1   MAKPSLQANALIFRKVKQMRCQFSSLVNGSHQIDETDETEPLSYNSSTWVPHPRTGIYFP 60
           MA+ S+QANAL+FRKVKQ+R QFSSL N SH  +ET ETEPLSYNSSTWVPHPRTGIYFP
Sbjct: 1   MARTSVQANALLFRKVKQLRRQFSSLANSSHNKEET-ETEPLSYNSSTWVPHPRTGIYFP 60

Query: 61  QGHEWVMKDVPENAASFSRVCWFRDSDGVDDLSPDTDPTSWNPRFA 107
           QGHEWVMKDVPENAASFS V WFRD DGVDDL+PDT P S  PR A
Sbjct: 61  QGHEWVMKDVPENAASFSPVFWFRDFDGVDDLNPDTHP-SPGPRLA 104

[Close]
BLAST of Sed0025917 vs. ExPASy TrEMBL
Match: A0A6J1EIT6 (uncharacterized protein LOC111434665 OS=Cucurbita moschata OX=3662 GN=LOC111434665 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 3.1e-38
Identity = 83/106 (78.30%), Postives = 89/106 (83.96%), Query Frame = 0 

Query: 1   MAKPSLQANALIFRKVKQMRCQFSSLVNGSHQIDETDETEPLSYNSSTWVPHPRTGIYFP 60
           MA+ S+QANAL+FR VKQ+R QFSSL N SH  +ET ETEPLSYNSSTWVPHPRTGIYFP
Sbjct: 44  MARTSVQANALLFRNVKQLRRQFSSLANSSHNKEET-ETEPLSYNSSTWVPHPRTGIYFP 103

Query: 61  QGHEWVMKDVPENAASFSRVCWFRDSDGVDDLSPDTDPTSWNPRFA 107
           QGHEWVMKDVPENAASFS V WFRD DGVDDL+PD  P S  PR A
Sbjct: 104 QGHEWVMKDVPENAASFSPVFWFRDFDGVDDLNPDAHP-SPGPRLA 147

[Close]
BLAST of Sed0025917 vs. ExPASy TrEMBL
Match: A0A6J1D3R9 (uncharacterized protein LOC111017332 OS=Momordica charantia OX=3673 GN=LOC111017332 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.4e-33
Identity = 75/110 (68.18%), Postives = 87/110 (79.09%), Query Frame = 0 

Query: 5   SLQANALIFRKVKQMRCQFSSLVNGS----HQIDETD-ETEPLSYNSSTWVPHPRTGIYF 64
           +++ANA++ R++KQ+R QFSS    S      + E D ETEP  YNSSTWVPHPRTGIYF
Sbjct: 48  AVKANAILLRRMKQLRRQFSSFAMESKAKEEALQEEDIETEPWPYNSSTWVPHPRTGIYF 107

Query: 65  PQGHEWVMKDVPENAASFSRVCWFRDSDGVDDLSPDTDPTSWNPRFAGSF 110
           PQGHEWVMKDVPENAASFSRVCWFRDSDGVDD +PD +P S  PRFA +F
Sbjct: 108 PQGHEWVMKDVPENAASFSRVCWFRDSDGVDDPNPDQNP-SVGPRFAAAF 156

[Close]
BLAST of Sed0025917 vs. ExPASy TrEMBL
Match: A0A0A0K7S0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071500 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 4.8e-31
Identity = 68/101 (67.33%), Postives = 78/101 (77.23%), Query Frame = 0 

Query: 6   LQANALIFRKVKQMRCQFSSLVNGS------HQIDETDETEPLSYNSSTWVPHPRTGIYF 65
           LQAN L  RK+KQ++ QF  LV  S      ++ D+  ETE L YNSSTWVPHPRTGIYF
Sbjct: 3   LQANPLFLRKMKQLKWQFRGLVIDSTSQQALNKKDDETETESLPYNSSTWVPHPRTGIYF 62

Query: 66  PQGHEWVMKDVPENAASFSRVCWFRDSDGVDDLSPDTDPTS 101
           PQGHEWVMKD+PENAASF R+CWFRDSD VDDL+PD D +S
Sbjct: 63  PQGHEWVMKDIPENAASFPRLCWFRDSDDVDDLNPDKDTSS 103

[Close]
BLAST of Sed0025917 vs. ExPASy TrEMBL
Match: A0A1S3C0N8 (uncharacterized protein LOC103495298 OS=Cucumis melo OX=3656 GN=LOC103495298 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.2e-29
Identity = 67/101 (66.34%), Postives = 80/101 (79.21%), Query Frame = 0 

Query: 6   LQANALIFRKVKQMRCQFSSLV--NGSHQI----DETDETEPLSYNSSTWVPHPRTGIYF 65
           LQAN L  RK+KQ++ QF SLV  + S Q+    D+  ET+ L YNSSTWVPHPRTGIYF
Sbjct: 8   LQANPLFLRKMKQLKRQFRSLVIDSTSQQVLNKKDDETETKSLPYNSSTWVPHPRTGIYF 67

Query: 66  PQGHEWVMKDVPENAASFSRVCWFRDSDGVDDLSPDTDPTS 101
           PQGHEWVMKD+PENAASFSR+CWFRDSD VDDL+ + + +S
Sbjct: 68  PQGHEWVMKDIPENAASFSRLCWFRDSDDVDDLNHENNTSS 108

[Close]
BLAST of Sed0025917 vs. TAIR 10
Match: AT3G19550.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; Has 36 Blast hits to 36 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 73.6 bits (179), Expect = 1.2e-13
Identity = 33/62 (53.23%), Postives = 38/62 (61.29%), Query Frame = 0 

Query: 34  DETDETEPLSYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSRVCWFRDSDGVDDLS 93
           D +D     S    +WVPHPRTGI+FP G E VM+DVP  AASF    W R+ DGVD   
Sbjct: 43  DISDHNLKFSGEEESWVPHPRTGIFFPPGQESVMEDVPNGAASFDMTFWLRNVDGVDKPD 102

Query: 94  PD 96
           PD
Sbjct: 103 PD 104

[Close]
BLAST of Sed0025917 vs. TAIR 10
Match: AT1G73120.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; EXPRESSED IN: root, cultured cell; Has 36 Blast hits to 36 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 43.9 bits (102), Expect = 1.0e-04
Identity = 17/26 (65.38%), Postives = 22/26 (84.62%), Query Frame = 0 

Query: 46 SSTWVPHPRTGIYFPQGHEWVMKDVP 72
          +S+WVPH  TGIY+P+G E VM+DVP
Sbjct: 68 ASSWVPHEGTGIYYPKGQEKVMQDVP 93

The following BLAST results are available for this feature:
BLAST of Sed0025917 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022989019.14.4e-3980.19uncharacterized protein LOC111486209 [Cucurbita maxima][more]
XP_023531513.14.4e-3980.19uncharacterized protein LOC111793725 [Cucurbita pepo subsp. pepo][more]
KAG6588707.11.7e-3879.25hypothetical protein SDJN03_17272, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022927901.16.4e-3878.30uncharacterized protein LOC111434665 [Cucurbita moschata][more]
XP_022148740.12.8e-3368.18uncharacterized protein LOC111017332 [Momordica charantia][more]
BLAST of Sed0025917 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sed0025917 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JN702.2e-3980.19uncharacterized protein LOC111486209 OS=Cucurbita maxima OX=3661 GN=LOC111486209... [more]
A0A6J1EIT63.1e-3878.30uncharacterized protein LOC111434665 OS=Cucurbita moschata OX=3662 GN=LOC1114346... [more]
A0A6J1D3R91.4e-3368.18uncharacterized protein LOC111017332 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
A0A0A0K7S04.8e-3167.33Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071500 PE=4 SV=1[more]
A0A1S3C0N81.2e-2966.34uncharacterized protein LOC103495298 OS=Cucumis melo OX=3656 GN=LOC103495298 PE=... [more]
BLAST of Sed0025917 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G19550.11.2e-1353.23unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G73120.11.0e-0465.38unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004926Late embryogenesis abundant protein, LEA_3 subgroupPFAMPF03242LEA_3coord: 34..63
e-value: 1.4E-4
score: 22.5
NoneNo IPR availablePANTHERPTHR35109:SF1GLUTAMATE RACEMASEcoord: 9..99
NoneNo IPR availablePANTHERPTHR35109GLUTAMATE RACEMASEcoord: 9..99

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0025917.1Sed0025917.1mRNA