Sed0025902 (gene) Chayote v1

Overview
NameSed0025902
Typegene
OrganismSechium edule (Chayote v1)
DescriptionBEST Arabidopsis thaliana protein match is: embryo defective 2170 .
LocationLG07: 43431261 .. 43433274 (+)
RNA-Seq ExpressionSed0025902
SyntenySed0025902
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAAATCTTCTTTTTGTAATTTTATATATTTTCCCGAGAAAGTGACTGAGAAAATCGAACCGCCATGATAATGACTCTCCTTCTTCTACAACAACAATCTCCATTTTCATTCCTTCAATTTCCATTTCGATTTCGAATCTCCCGATTTTAGGGTTTCCAACGCCATGGATTCCGGTTCTGCAGCCACCAGGTCGCGGTCTGCTTTGAATCACGACATCTTCCGGAGTTGGAACGGGAAGCAGATTCATCTCAGGGATGACGACGCCGCGGCGGTGGAGTATGGATTTCGATCCACCCCTCAGTTGAGCCCTAGATCTTTCCGATCGAGTTACCGGAGCCTCTCGCCGCCGGCCAAGGCTCTCGCCGTGGCTACCGGGCAGAAGGAGCTCATGGAAATCGTGAACAATATGCCGGAGTGTTCTTACGAGTTGTCGTTGAGAGATCTGGTGGAGCAGCCCATGGTTTTGGGCGCCCGTGAGCAAACCCTAACTGATGATGTTAGGGTTTTCGATTTGGGCGGCGGCGATCGGGAGAATCGGAGATCGAGGAAGGAAAGTAGGCCGCCGTCGGCGTTCGTGGAGAATGGAGGTTTGTATCTGAAGATGGGGTTACCGAAATCGATTGGAGCGAAGACGACGAGGAAGAAGATGATTGATTCTGGTTTGAATATGAGTGCTAAAGTTTCGCCGAAACCTTCTCAGTCGAGTGAAAATGGTATAAACGATGGAAATATGAAGAGCAAGAACAGAACAAAAGCCACCCATAGGTAACGCCCTCAATCTTTATTGGATTCATTTCTTACCTTTTATCTTAAGAAATTAATATTTGATCATGCTCACCTAAGAATTAATGTCCTACTAGTTTGACATTCAAATGTTGTAGTGTCAAGGTCGAGCAGCATATAAGTTGGTCCGGACAAGTCGCGGATACCAAAATAATAATAATAATATTTGATATCCTGTGATGAAATGAACAACATGGCAGTTCACCATTCAGTAAAATATTTTGTGATCTACATCAATTTGGGAAGTAAAATTTCTGTAGGTGGTAATACTAGTAGCATAGGAACCTGCTCTGAAATGAATCTGTTCAGAACACGTGGATTGTATCATGTAAGAAATTGCTATTCTGAAGATAAATCATTTTTCTCTGAAATGAAAAACAGAGAAATTCACCATTCAATGGTATCAATCATTTATATTCTGAAATCATCATTTTGGGTTGTAAATTTCTTAATCTGTTTCATGCACCAGTATTCTAAATTAAAGTTTACAGGGCTGATTATGGGCGTTGTTTCTCTTAAATGAAGAGTAGGCCAATTCATTATTAATAGAGAATCATTTTGGATTGATAAAGTTCCATTTGATAACTATTTGAGTTTTTGTTTTTTGTTTATAAAAGTTAAGTCTATTTATACTCAAATTTCCTACCAATATATCAATCTTTTCTTAAGAGAGTAGGTGAATGCTGATACTATCCAAATTTCAAAAACAAAAACAAACTTTGGGATACTACTTTTTTTTTGCTTCCAAATTTTGGTTTTGTTTCTTAAAATATAGGCATCTAAATAAGAAAAAAAAATTTGGTAAGGTAGTTCTAGACTTAAATTTAAAAAACAAAATGGTTATCAAACGAGGTTTAAACTGGACTCATCATCATTAATTTATTCTCATGAATCATGATTGCATTGTAGGCATGAGAGTGGAGGTTGCTGGTCATGTATTTATCCCAAATACAACGAACGAGATGATTAAAGAGGCTGCTATGCAATCCAATCAGACAAAGCAAAGCACAAAGCAGAAGCCATAGGCATATCTATATGAAAATGGAGGCATTTATCCTACACCATCTGTATATTCATTCCTTTCTAGTTTTTCAACTAAAATGCTTCCTTTTTTGTTTGTCTTTTTTTTTTGTTCTTTGATATATATACATATAAACATATATATATATATCCTTGTGTCTTCTTCTTGAAAAGCTAATCCATGGAATGAATCTCTTATTTCAATGAAAA

mRNA sequence

CAAAATCTTCTTTTTGTAATTTTATATATTTTCCCGAGAAAGTGACTGAGAAAATCGAACCGCCATGATAATGACTCTCCTTCTTCTACAACAACAATCTCCATTTTCATTCCTTCAATTTCCATTTCGATTTCGAATCTCCCGATTTTAGGGTTTCCAACGCCATGGATTCCGGTTCTGCAGCCACCAGGTCGCGGTCTGCTTTGAATCACGACATCTTCCGGAGTTGGAACGGGAAGCAGATTCATCTCAGGGATGACGACGCCGCGGCGGTGGAGTATGGATTTCGATCCACCCCTCAGTTGAGCCCTAGATCTTTCCGATCGAGTTACCGGAGCCTCTCGCCGCCGGCCAAGGCTCTCGCCGTGGCTACCGGGCAGAAGGAGCTCATGGAAATCGTGAACAATATGCCGGAGTGTTCTTACGAGTTGTCGTTGAGAGATCTGGTGGAGCAGCCCATGGTTTTGGGCGCCCGTGAGCAAACCCTAACTGATGATGTTAGGGTTTTCGATTTGGGCGGCGGCGATCGGGAGAATCGGAGATCGAGGAAGGAAAGTAGGCCGCCGTCGGCGTTCGTGGAGAATGGAGGTTTGTATCTGAAGATGGGGTTACCGAAATCGATTGGAGCGAAGACGACGAGGAAGAAGATGATTGATTCTGGTTTGAATATGAGTGCTAAAGTTTCGCCGAAACCTTCTCAGTCGAGTGAAAATGGTATAAACGATGGAAATATGAAGAGCAAGAACAGAACAAAAGCCACCCATAGGCATGAGAGTGGAGGTTGCTGGTCATGTATTTATCCCAAATACAACGAACGAGATGATTAAAGAGGCTGCTATGCAATCCAATCAGACAAAGCAAAGCACAAAGCAGAAGCCATAGGCATATCTATATGAAAATGGAGGCATTTATCCTACACCATCTGTATATTCATTCCTTTCTAGTTTTTCAACTAAAATGCTTCCTTTTTTGTTTGTCTTTTTTTTTTGTTCTTTGATATATATACATATAAACATATATATATATATCCTTGTGTCTTCTTCTTGAAAAGCTAATCCATGGAATGAATCTCTTATTTCAATGAAAA

Coding sequence (CDS)

ATGGATTCCGGTTCTGCAGCCACCAGGTCGCGGTCTGCTTTGAATCACGACATCTTCCGGAGTTGGAACGGGAAGCAGATTCATCTCAGGGATGACGACGCCGCGGCGGTGGAGTATGGATTTCGATCCACCCCTCAGTTGAGCCCTAGATCTTTCCGATCGAGTTACCGGAGCCTCTCGCCGCCGGCCAAGGCTCTCGCCGTGGCTACCGGGCAGAAGGAGCTCATGGAAATCGTGAACAATATGCCGGAGTGTTCTTACGAGTTGTCGTTGAGAGATCTGGTGGAGCAGCCCATGGTTTTGGGCGCCCGTGAGCAAACCCTAACTGATGATGTTAGGGTTTTCGATTTGGGCGGCGGCGATCGGGAGAATCGGAGATCGAGGAAGGAAAGTAGGCCGCCGTCGGCGTTCGTGGAGAATGGAGGTTTGTATCTGAAGATGGGGTTACCGAAATCGATTGGAGCGAAGACGACGAGGAAGAAGATGATTGATTCTGGTTTGAATATGAGTGCTAAAGTTTCGCCGAAACCTTCTCAGTCGAGTGAAAATGGTATAAACGATGGAAATATGAAGAGCAAGAACAGAACAAAAGCCACCCATAGGCATGAGAGTGGAGGTTGCTGGTCATGTATTTATCCCAAATACAACGAACGAGATGATTAA

Protein sequence

MDSGSAATRSRSALNHDIFRSWNGKQIHLRDDDAAAVEYGFRSTPQLSPRSFRSSYRSLSPPAKALAVATGQKELMEIVNNMPECSYELSLRDLVEQPMVLGAREQTLTDDVRVFDLGGGDRENRRSRKESRPPSAFVENGGLYLKMGLPKSIGAKTTRKKMIDSGLNMSAKVSPKPSQSSENGINDGNMKSKNRTKATHRHESGGCWSCIYPKYNERDD
Homology
BLAST of Sed0025902 vs. NCBI nr
Match: XP_023536601.1 (uncharacterized protein LOC111797724 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 252.7 bits (644), Expect = 3.0e-63
Identity = 158/271 (58.30%), Postives = 185/271 (68.27%), Query Frame = 0

Query: 1   MDSGS-AATRSRS----ALNHDIFRSWNGKQIHLRDDDAAAVEYGFR-STPQLSPRSFRS 60
           MD GS A+TRSRS    ALNHDIFRSWNGKQIHL+DD+   VEYGFR S+PQ SP+ +RS
Sbjct: 24  MDFGSPASTRSRSSSRPALNHDIFRSWNGKQIHLKDDE--TVEYGFRLSSPQRSPQFYRS 83

Query: 61  SYRSLSPPAKALAVATGQKELMEIVNNMPECSYELSLRDLVEQPMVLGAREQTLTDDVRV 120
           +Y+SLSPP+KALA+ATGQKELME+VNNMPE  YELSLRDLVEQPMVLG +E T  ++   
Sbjct: 84  NYQSLSPPSKALAIATGQKELMELVNNMPESCYELSLRDLVEQPMVLGQQEPTGANERD- 143

Query: 121 FDLGGGDR-----ENRRSRKESRP----PSAFVENGGLYLKMGLPKSIGAKTTRKKM--- 180
               GGDR     ENR+SRKE+       S  +ENGGLYLKMG P SIG +T +KK    
Sbjct: 144 ---KGGDREVFAMENRKSRKETSALVGRSSWNMENGGLYLKMGFPNSIGTRTKKKKKNNN 203

Query: 181 IDSGLNMSAKVSPKPSQ-------------SSENG-------INDGNMKS---------- 221
            DSGLN SAKVSPKPS              SSE G       +N+G++KS          
Sbjct: 204 NDSGLNTSAKVSPKPSHPVEKDWWKRRLSVSSETGSVAYDSSVNNGSIKSSSSSSSNGSN 263

BLAST of Sed0025902 vs. NCBI nr
Match: XP_022975014.1 (uncharacterized protein LOC111473911 [Cucurbita maxima])

HSP 1 Score: 246.9 bits (629), Expect = 1.6e-61
Identity = 155/270 (57.41%), Postives = 184/270 (68.15%), Query Frame = 0

Query: 1   MDSGS-AATRSRS----ALNHDIFRSWNGKQIHLRDDDAAAVEYGFR-STPQLSPRSFRS 60
           MD GS A+TRSRS    ALNHDIFRSWNGKQIHL+DD+   VEYGFR S+PQ SP+ +RS
Sbjct: 24  MDFGSPASTRSRSSSRPALNHDIFRSWNGKQIHLKDDE--TVEYGFRLSSPQRSPQFYRS 83

Query: 61  SYRSLSPPAKALAVATGQKELMEIVNNMPECSYELSLRDLVEQPMVLGAREQTLTDDVRV 120
           +Y+SLSPP+K+LA+ATGQKELME+VNNMPE  YELSLRDLVEQPMVLG +E T  ++   
Sbjct: 84  NYQSLSPPSKSLAIATGQKELMELVNNMPESCYELSLRDLVEQPMVLGQQEPTGANERD- 143

Query: 121 FDLGGGDR-----ENRRSRKESR----PPSAFVENGGLYLKMGLPKSIGAKTTRKKM--I 180
               GGDR     ENR+S+KE+       S  +ENGGLYLKMG P SIG +T +KK    
Sbjct: 144 ---KGGDREVFATENRKSKKETSGLVGRSSWNMENGGLYLKMGFPNSIGTRTKKKKKKNN 203

Query: 181 DSGLNMSAKVSPKPSQ-------------SSENG-------INDGNMKS----------- 221
           DSGLN SAKVSPKPS              SSE G       +N+G++KS           
Sbjct: 204 DSGLNTSAKVSPKPSHPVEKDWWKRRLSVSSETGSVAYDSIVNNGSIKSSSSSSSNGSNG 263

BLAST of Sed0025902 vs. NCBI nr
Match: KAG6592161.1 (hypothetical protein SDJN03_14507, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 245.7 bits (626), Expect = 3.6e-61
Identity = 156/270 (57.78%), Postives = 183/270 (67.78%), Query Frame = 0

Query: 1   MDSGS-AATRSRS----ALNHDIFRSWNGKQIHLRDDDAAAVEYGFR-STPQLSPRSFRS 60
           MD GS A+TRSRS    ALNHDIFRSWNGKQIHL+DD+  AVEYGFR S+PQ SP+ +RS
Sbjct: 24  MDFGSPASTRSRSSSRPALNHDIFRSWNGKQIHLKDDE--AVEYGFRLSSPQRSPQFYRS 83

Query: 61  SYRSLSPPAKALAVATGQKELMEIVNNMPECSYELSLRDLVEQPMVLGAREQTLTDDVRV 120
           +Y+SLSPP+KALA+ATGQKELME+VNNMPE  YELSLRDLVEQPMVLG +E T  ++   
Sbjct: 84  NYQSLSPPSKALAIATGQKELMELVNNMPESCYELSLRDLVEQPMVLGQQEPTGANERD- 143

Query: 121 FDLGGGDR-----ENRRSRKESRP----PSAFVENGGLYLKMGLPKSIGAKTTRKKM--I 180
               GGDR     ENR+S+KE+       S  +ENGGLYLKMG P SIG +T +KK    
Sbjct: 144 ---KGGDREVFAMENRKSKKETSALVGRSSWNMENGGLYLKMGFPNSIGTRTKKKKKKNN 203

Query: 181 DSGLNMSAKVSPKPSQ-------------SSENG-------INDGNMKS----------- 221
           DSGLN SAKVSPKPS              SSE G       +N+G++KS           
Sbjct: 204 DSGLNTSAKVSPKPSHPVEKDWWKRRLSVSSETGSVAYDSSVNNGSIKSSSSSSSNGSNG 263

BLAST of Sed0025902 vs. NCBI nr
Match: XP_022937271.1 (uncharacterized protein LOC111443607 [Cucurbita moschata])

HSP 1 Score: 245.4 bits (625), Expect = 4.7e-61
Identity = 156/271 (57.56%), Postives = 183/271 (67.53%), Query Frame = 0

Query: 1   MDSGS-AATRSRS----ALNHDIFRSWNGKQIHLRDDDAAAVEYGFR-STPQLSPRSFRS 60
           MD GS A+TRSRS    ALNHDIFRSWNGKQIHL+DD+  AVEYGFR S+PQ SP+ +RS
Sbjct: 24  MDFGSPASTRSRSSSRPALNHDIFRSWNGKQIHLKDDE--AVEYGFRLSSPQRSPQFYRS 83

Query: 61  SYRSLSPPAKALAVATGQKELMEIVNNMPECSYELSLRDLVEQPMVLGAREQTLTDDVRV 120
           +Y+SLSPP+KALA+ATGQKELME+VNNMPE  YELSLRDLVEQPMVLG +E T  ++   
Sbjct: 84  NYQSLSPPSKALAIATGQKELMELVNNMPESCYELSLRDLVEQPMVLGQQEPTGANERD- 143

Query: 121 FDLGGGDR-----ENRRSRKESRP----PSAFVENGGLYLKMGLPKSIGAKTTRKKM--- 180
               GGDR     ENR+S+KE+       S  +ENGGLYLKMG P SIG +T +KK    
Sbjct: 144 ---KGGDREVFAMENRKSKKETSALVGRSSWNMENGGLYLKMGFPNSIGTRTKKKKKKKN 203

Query: 181 IDSGLNMSAKVSPKPSQ-------------SSENG-------INDGNMKS---------- 221
            DSGLN SAKVSPKPS              SSE G       +N+G++KS          
Sbjct: 204 NDSGLNTSAKVSPKPSHPVEKDWWKRRLSVSSETGSVAYDSSVNNGSIKSSSSSSSNGSN 263

BLAST of Sed0025902 vs. NCBI nr
Match: XP_004146783.1 (uncharacterized protein LOC101215856 [Cucumis sativus] >KGN47988.2 hypothetical protein Csa_004242 [Cucumis sativus])

HSP 1 Score: 245.4 bits (625), Expect = 4.7e-61
Identity = 151/258 (58.53%), Postives = 173/258 (67.05%), Query Frame = 0

Query: 1   MDSGSAATRSRSALNHDIFRSWNGKQIHLRDDDAAAVEYGFRST-PQLSPRSFRSSYRSL 60
           M+  S    SR ALNHDIFRSWNGKQIHLRDD     EYGFR T PQ SP+ +RS+Y +L
Sbjct: 25  MEFSSPTRSSRPALNHDIFRSWNGKQIHLRDDH--PFEYGFRLTSPQRSPQFYRSNYHTL 84

Query: 61  SPPAKALAVATGQKELMEIVNNMPECSYELSLRDLVEQPMVLGAREQTLTDDVRVFDLGG 120
           SPP+KALA+ATGQKELMEIVNNMPE  YELSLRDLVEQPMVLG RE T  D+   + LGG
Sbjct: 85  SPPSKALAIATGQKELMEIVNNMPESCYELSLRDLVEQPMVLGQREDTGVDEKDSY-LGG 144

Query: 121 G----DRENRRSRKESRP--PSAFVENGGLYLKMGLPKSIGAKT-TRKKMIDSGLNMSAK 180
                 RENR+SRKE+R       +EN GLYLKMG PKSIG  T  +KK  DS LNMSAK
Sbjct: 145 DREVFSRENRKSRKETRALVGRTSMENEGLYLKMGFPKSIGTTTRKKKKKNDSSLNMSAK 204

Query: 181 VSPKPSQ-------------SSE-------NGINDGNMKS----------KNRTKATHRH 221
           VSPKP Q             SSE       + +N+G++KS          KNRTK+T R 
Sbjct: 205 VSPKPPQLVEKDWWKRRLSVSSESESLSYGSNVNNGSIKSSSSSSSDGSNKNRTKSTGRR 264

BLAST of Sed0025902 vs. ExPASy TrEMBL
Match: A0A6J1IJ72 (uncharacterized protein LOC111473911 OS=Cucurbita maxima OX=3661 GN=LOC111473911 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 7.9e-62
Identity = 155/270 (57.41%), Postives = 184/270 (68.15%), Query Frame = 0

Query: 1   MDSGS-AATRSRS----ALNHDIFRSWNGKQIHLRDDDAAAVEYGFR-STPQLSPRSFRS 60
           MD GS A+TRSRS    ALNHDIFRSWNGKQIHL+DD+   VEYGFR S+PQ SP+ +RS
Sbjct: 24  MDFGSPASTRSRSSSRPALNHDIFRSWNGKQIHLKDDE--TVEYGFRLSSPQRSPQFYRS 83

Query: 61  SYRSLSPPAKALAVATGQKELMEIVNNMPECSYELSLRDLVEQPMVLGAREQTLTDDVRV 120
           +Y+SLSPP+K+LA+ATGQKELME+VNNMPE  YELSLRDLVEQPMVLG +E T  ++   
Sbjct: 84  NYQSLSPPSKSLAIATGQKELMELVNNMPESCYELSLRDLVEQPMVLGQQEPTGANERD- 143

Query: 121 FDLGGGDR-----ENRRSRKESR----PPSAFVENGGLYLKMGLPKSIGAKTTRKKM--I 180
               GGDR     ENR+S+KE+       S  +ENGGLYLKMG P SIG +T +KK    
Sbjct: 144 ---KGGDREVFATENRKSKKETSGLVGRSSWNMENGGLYLKMGFPNSIGTRTKKKKKKNN 203

Query: 181 DSGLNMSAKVSPKPSQ-------------SSENG-------INDGNMKS----------- 221
           DSGLN SAKVSPKPS              SSE G       +N+G++KS           
Sbjct: 204 DSGLNTSAKVSPKPSHPVEKDWWKRRLSVSSETGSVAYDSIVNNGSIKSSSSSSSNGSNG 263

BLAST of Sed0025902 vs. ExPASy TrEMBL
Match: A0A6J1F9W6 (uncharacterized protein LOC111443607 OS=Cucurbita moschata OX=3662 GN=LOC111443607 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 2.3e-61
Identity = 156/271 (57.56%), Postives = 183/271 (67.53%), Query Frame = 0

Query: 1   MDSGS-AATRSRS----ALNHDIFRSWNGKQIHLRDDDAAAVEYGFR-STPQLSPRSFRS 60
           MD GS A+TRSRS    ALNHDIFRSWNGKQIHL+DD+  AVEYGFR S+PQ SP+ +RS
Sbjct: 24  MDFGSPASTRSRSSSRPALNHDIFRSWNGKQIHLKDDE--AVEYGFRLSSPQRSPQFYRS 83

Query: 61  SYRSLSPPAKALAVATGQKELMEIVNNMPECSYELSLRDLVEQPMVLGAREQTLTDDVRV 120
           +Y+SLSPP+KALA+ATGQKELME+VNNMPE  YELSLRDLVEQPMVLG +E T  ++   
Sbjct: 84  NYQSLSPPSKALAIATGQKELMELVNNMPESCYELSLRDLVEQPMVLGQQEPTGANERD- 143

Query: 121 FDLGGGDR-----ENRRSRKESRP----PSAFVENGGLYLKMGLPKSIGAKTTRKKM--- 180
               GGDR     ENR+S+KE+       S  +ENGGLYLKMG P SIG +T +KK    
Sbjct: 144 ---KGGDREVFAMENRKSKKETSALVGRSSWNMENGGLYLKMGFPNSIGTRTKKKKKKKN 203

Query: 181 IDSGLNMSAKVSPKPSQ-------------SSENG-------INDGNMKS---------- 221
            DSGLN SAKVSPKPS              SSE G       +N+G++KS          
Sbjct: 204 NDSGLNTSAKVSPKPSHPVEKDWWKRRLSVSSETGSVAYDSSVNNGSIKSSSSSSSNGSN 263

BLAST of Sed0025902 vs. ExPASy TrEMBL
Match: A0A1S4E6L8 (uncharacterized protein LOC103504041 OS=Cucumis melo OX=3656 GN=LOC103504041 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 3.3e-60
Identity = 150/256 (58.59%), Postives = 173/256 (67.58%), Query Frame = 0

Query: 3   SGSAATRSRSALNHDIFRSWNGKQIHLRDDDAAAVEYGFRST-PQLSPRSFRSSYRSLSP 62
           S S    SR ALNHDIFRSWNGKQIHLRDD     EYGFR T PQ SP+ +RS+Y +LSP
Sbjct: 29  SPSPTRSSRPALNHDIFRSWNGKQIHLRDDH--PFEYGFRLTSPQRSPQFYRSNYHTLSP 88

Query: 63  PAKALAVATGQKELMEIVNNMPECSYELSLRDLVEQPMVLGAREQTLTDDVRVFDLGGG- 122
           P+KALA+ATGQKELMEIVNNMPE  YELSLRDLVEQPMV+G RE T  D+ R  +LGG  
Sbjct: 89  PSKALAIATGQKELMEIVNNMPESCYELSLRDLVEQPMVVGQREDTGVDE-RDSNLGGHR 148

Query: 123 ---DRENRRSRKESRP--PSAFVENGGLYLKMGLPKSIGAKT-TRKKMIDSGLNMSAKVS 182
               RENR+SRKE+R     + +EN GLYLKMG PKSIG  T  +KK  DS LNMSAKVS
Sbjct: 149 EVFSRENRKSRKETRALVGRSSMENEGLYLKMGFPKSIGTTTRKKKKKNDSSLNMSAKVS 208

Query: 183 PKPSQ-------------SSE-------NGINDGNMKS----------KNRTKATHRHES 221
           PKP Q             SSE       + +N+G++KS          K+RTK+T R   
Sbjct: 209 PKPPQLVEKDWWKRRLSVSSESESVSYGSNVNNGSIKSSSSSSSNGSNKSRTKSTGRRAK 268

BLAST of Sed0025902 vs. ExPASy TrEMBL
Match: A0A6J1DJS6 (uncharacterized protein LOC111021132 OS=Momordica charantia OX=3673 GN=LOC111021132 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 2.7e-54
Identity = 138/248 (55.65%), Postives = 167/248 (67.34%), Query Frame = 0

Query: 10  SRSALNHDIFRSWNGKQIHLRDDDAAAVEYGFRSTPQLSPRSFRSSYRSLSPPAKALAVA 69
           SR ALNH+IFRSWNG+QIHLR D+A  +E GFR +PQ SP+ +RS+Y+SLSPP+KA A+A
Sbjct: 28  SRPALNHEIFRSWNGRQIHLR-DEAVELESGFRLSPQRSPQFYRSNYQSLSPPSKARAIA 87

Query: 70  TGQKELMEIVNNMPECSYELSLRDLVEQPMVLGAREQTLTDDVRVFDLGGGDR-----EN 129
           TGQKELME+V++MPE  YELSLRDLVEQP VLG  E+T+ D+ R F+L GGDR     EN
Sbjct: 88  TGQKELMEMVSHMPESCYELSLRDLVEQPRVLGLEEETVADE-RDFNL-GGDREIFAMEN 147

Query: 130 RRSRKE-SRP----PSAFVENGGLYLKMGLPKSIGAKTTRKKMIDSGLNMSAKVSPKP-- 189
           R+S+K  SRP     +  +ENGGLYLKMG PKSIG    +KK  DS LN SAKVSPKP  
Sbjct: 148 RKSKKGISRPLVSKSTGNMENGGLYLKMGFPKSIGTTKKKKKKNDSALNTSAKVSPKPPP 207

Query: 190 -----------SQSSE-------NGINDGNMKS-------------KNRTKATHRHESGG 215
                      S SSE       + IN+G++KS             KNRTK+  R+ SGG
Sbjct: 208 PADKDWWKRRFSVSSESESVGYGSSINNGSIKSSSSSSSNGSHGSNKNRTKSARRNTSGG 267

BLAST of Sed0025902 vs. ExPASy TrEMBL
Match: A0A0A0KH64 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G397170 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 3.3e-52
Identity = 140/245 (57.14%), Postives = 159/245 (64.90%), Query Frame = 0

Query: 1   MDSGSAATRSRSALNHDIFRSWNGKQIHLRDDDAAAVEYGFRST-PQLSPRSFRSSYRSL 60
           M+  S    SR ALNHDIFRSWNGKQIHLRDD     EYGFR T PQ SP+ +RS+Y +L
Sbjct: 25  MEFSSPTRSSRPALNHDIFRSWNGKQIHLRDDH--PFEYGFRLTSPQRSPQFYRSNYHTL 84

Query: 61  SPPAKALAVATGQKELMEIVNNMPECSYELSLRDLVEQPMVLGAREQTLTDDVRVFDLGG 120
           SPP+KALA+ATGQKELMEIVNNMPE  YELSLRDLVEQPMVLG RE T  D+   + LGG
Sbjct: 85  SPPSKALAIATGQKELMEIVNNMPESCYELSLRDLVEQPMVLGQREDTGVDEKDSY-LGG 144

Query: 121 G----DRENRRSRKESRP--PSAFVENGGLYLKMGLPKSIGAKT-TRKKMIDSGLNMSAK 180
                 RENR+SRKE+R       +EN GLYLKMG PKSIG  T  +KK  DS LNMSAK
Sbjct: 145 DREVFSRENRKSRKETRALVGRTSMENEGLYLKMGFPKSIGTTTRKKKKKNDSSLNMSAK 204

Query: 181 VSPKPSQ-------------SSE-------NGINDGNMKS----------KNRTKATHRH 208
           VSPKP Q             SSE       + +N+G++KS          KNRTK+T R 
Sbjct: 205 VSPKPPQLVEKDWWKRRLSVSSESESLSYGSNVNNGSIKSSSSSSSDGSNKNRTKSTGRE 264

BLAST of Sed0025902 vs. TAIR 10
Match: AT1G21390.1 (embryo defective 2170 )

HSP 1 Score: 73.9 bits (180), Expect = 1.8e-13
Identity = 65/186 (34.95%), Postives = 95/186 (51.08%), Query Frame = 0

Query: 41  FRSTPQLSPRSFR--SSYRSLSPPAKALAVATGQKELMEIVNNMPECSYELSLRDLVEQP 100
           +R++P  SP  F     Y SLSP +KA A+A GQ+ELME+V+ MPE  YELSL+DLVE  
Sbjct: 35  WRTSPPKSPPPFHRPEDYWSLSPDSKAQAIARGQRELMEMVSKMPESCYELSLKDLVE-V 94

Query: 101 MVLGAREQTLTDDV--RVFDLGGGDRENRRSRKESRPPSAFVENGGLYLKMGLPKSIGA- 160
            V    E+ + D++  R        R+ +  ++     S    N G  LK+    S+GA 
Sbjct: 95  KVNQENERKVFDELPKRANRQSKVVRKTKSDKRVDPNRSGGGNNSGFLLKIMFLVSLGAM 154

Query: 161 KTTRKKMIDSGLNMSAKVSPKPSQSSEN-GINDGNMKSKNRTKATHRHESGGCWSCIYPK 220
           K T KK      + + KVSP+PS S E   + D    ++    +T R  S    + I  +
Sbjct: 155 KDTTKKKKKKKKDEACKVSPRPSISEETVKVEDKEWWNRMSESSTKRSGSSSSNNSIRSR 214

BLAST of Sed0025902 vs. TAIR 10
Match: AT1G76980.1 (BEST Arabidopsis thaliana protein match is: embryo defective 2170 (TAIR:AT1G21390.1); Has 65 Blast hits to 65 proteins in 23 species: Archae - 0; Bacteria - 8; Metazoa - 1; Fungi - 8; Plants - 40; Viruses - 3; Other Eukaryotes - 5 (source: NCBI BLink). )

HSP 1 Score: 71.6 bits (174), Expect = 8.7e-13
Identity = 54/164 (32.93%), Postives = 91/164 (55.49%), Query Frame = 0

Query: 41  FRSTPQLSPRSFRSSYRSLSPPAKALAVATGQKELMEIVNNMPECSYELSLRDLVEQPMV 100
           +R++P  SP    ++Y++LSP  KA  +A GQ+ELM++V+ MPE  YELSL+DLVE    
Sbjct: 35  WRTSPPKSPAHLHNNYQNLSPVTKAQVIARGQRELMDMVSKMPESCYELSLKDLVE---- 94

Query: 101 LGAREQTLTDDVRVFD-LGGGDRENRRSRKESRPP-------SAFVENGGLYLKMGLPKS 160
                   T++ +VFD +   +++ R+  ++++         +  V N G  LK+  P S
Sbjct: 95  ------VNTEEEKVFDEMPQREKKPRKVVRKTKSDKWVDPIRNGGVNNSGFLLKLVFPVS 154

Query: 161 IGAKTTRKKMIDSGLNMSAKVSPKPSQSSEN-GINDGNMKSKNR 196
           +GAK    K  D+  + S+  S +   SS    I+D +MK +++
Sbjct: 155 LGAKKKTNKKKDNDDDDSSVTSKRSWISSPRPSISDLSMKREDK 188

BLAST of Sed0025902 vs. TAIR 10
Match: AT1G76980.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: embryo defective 2170 (TAIR:AT1G21390.1); Has 61 Blast hits to 61 proteins in 18 species: Archae - 0; Bacteria - 8; Metazoa - 8; Fungi - 2; Plants - 40; Viruses - 3; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 71.6 bits (174), Expect = 8.7e-13
Identity = 54/164 (32.93%), Postives = 91/164 (55.49%), Query Frame = 0

Query: 41  FRSTPQLSPRSFRSSYRSLSPPAKALAVATGQKELMEIVNNMPECSYELSLRDLVEQPMV 100
           +R++P  SP    ++Y++LSP  KA  +A GQ+ELM++V+ MPE  YELSL+DLVE    
Sbjct: 35  WRTSPPKSPAHLHNNYQNLSPVTKAQVIARGQRELMDMVSKMPESCYELSLKDLVE---- 94

Query: 101 LGAREQTLTDDVRVFD-LGGGDRENRRSRKESRPP-------SAFVENGGLYLKMGLPKS 160
                   T++ +VFD +   +++ R+  ++++         +  V N G  LK+  P S
Sbjct: 95  ------VNTEEEKVFDEMPQREKKPRKVVRKTKSDKWVDPIRNGGVNNSGFLLKLVFPVS 154

Query: 161 IGAKTTRKKMIDSGLNMSAKVSPKPSQSSEN-GINDGNMKSKNR 196
           +GAK    K  D+  + S+  S +   SS    I+D +MK +++
Sbjct: 155 LGAKKKTNKKKDNDDDDSSVTSKRSWISSPRPSISDLSMKREDK 188

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_023536601.13.0e-6358.30uncharacterized protein LOC111797724 [Cucurbita pepo subsp. pepo][more]
XP_022975014.11.6e-6157.41uncharacterized protein LOC111473911 [Cucurbita maxima][more]
KAG6592161.13.6e-6157.78hypothetical protein SDJN03_14507, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022937271.14.7e-6157.56uncharacterized protein LOC111443607 [Cucurbita moschata][more]
XP_004146783.14.7e-6158.53uncharacterized protein LOC101215856 [Cucumis sativus] >KGN47988.2 hypothetical ... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1IJ727.9e-6257.41uncharacterized protein LOC111473911 OS=Cucurbita maxima OX=3661 GN=LOC111473911... [more]
A0A6J1F9W62.3e-6157.56uncharacterized protein LOC111443607 OS=Cucurbita moschata OX=3662 GN=LOC1114436... [more]
A0A1S4E6L83.3e-6058.59uncharacterized protein LOC103504041 OS=Cucumis melo OX=3656 GN=LOC103504041 PE=... [more]
A0A6J1DJS62.7e-5455.65uncharacterized protein LOC111021132 OS=Momordica charantia OX=3673 GN=LOC111021... [more]
A0A0A0KH643.3e-5257.14Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G397170 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G21390.11.8e-1334.95embryo defective 2170 [more]
AT1G76980.18.7e-1332.93BEST Arabidopsis thaliana protein match is: embryo defective 2170 (TAIR:AT1G2139... [more]
AT1G76980.28.7e-1332.93FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 115..133
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 167..203
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 171..192
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 115..139
NoneNo IPR availablePANTHERPTHR34193OS11G0199801 PROTEINcoord: 9..214
NoneNo IPR availablePANTHERPTHR34193:SF1OS11G0199801 PROTEINcoord: 9..214

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0025902.1Sed0025902.1mRNA