Sed0025877 (gene) Chayote v1

Overview


Name	Sed0025877
Type	gene
Organism	Sechium edule (Chayote v1)
Description	microtubule-associated protein RP/EB family member 1B-like
Location	LG08: 34828091 .. 34831300 (+)
RNA-Seq Expression	Sed0025877
Synteny	Sed0025877

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATGTTTAAAATTAGGGTAGTCTTGTTTGAGGTAACGCTAATTAGTTATTGGCGTTGAACAATGAATTCCGTGCACCGTTGAAATCCACAATCCGTTTTGGAAAAAGTTGAAAAATCTTCGAAATGGAAATGGAAATGGTGGGTTTGTTTTCAAATTTGGGTTTAAAGGATCGTTTCCCCCTTAATATACGGCCATAAGCCGTCCTTCATTTCCCCTTTATTTTAACATTTTTCTCCTCTCTGTTTCTTCATTCCCATCTCGATTTCTCCCCCCTCTTATGATTTGGGGTTTCTTCAAATCGATTCCTCAACATGGCCTCCAATATTGGAATGATGGACAGCGCTTATTTTGTCGGCAGGAACGAGATTTTGACATGGATCAACAATTGCCTCCAACTCAATCTCTCTCGCATTGAAGAGGTTTTTTCTGCATTTTTCTACTTTTTTTTGGTTTTTTATGGAGGAAATGTGTTTGTGTTGCAATGCCTGAAGTGGCTTTTGTCTTTCTGTTTATGCATTTCAAGTTTTTGTTCGGCCCCCCGTTTCGTTTTTGGCGTTTGTTTTTGAAGAAATGCTTGGAAAAAGGAATCGATGTTTGATTCAACCTCGAATTTTTTCTAAGGGGTGTTGTTCGGTTGGTTTATTTACGATTTGGGTTGGTTTCTTTACGACTAATTTAGGTTTCTTGGCAATTTCTAACCATGACAAATGGTAGTGATTTGGATTTCTTATTGAAATTTCGTTACCTTTGCTCAAGGAAAGAAAAGGGTCATAATGTTTTTGTGTTCATTTCACATGATCCTCTTGCATTCTACTGATTTTGATTGTGGGTACAATTAGAACTTGTAGTTGAGAAGTGACTTGAGTTTATAATACCTGCTGTCTTATTAATCTTAGTTTGCAAAGCTTGAATTCTGTAGAACTTAGAATTAATTATGAGAACTAGATTGTGTATGAGATCAAGTGAAACTTAACTGTTTATGCTATGCTCATACTGATTTATTTTTTTCCCCATTTAGTCATGCGAGATTCTCTGAAAAGTTCTCATTTTGAGAGTTTTTGTCTAGCCATATTTTCTTAGATTTGTTTTTCAATAGGGTGCAAGTTATTTGCCTATTATATGGTGTATTGACTTCATTGCAACTTACAAGCATTACTAATATTGGATGTTTTTCCCTTTATTCTGGTTTTCTACTTGTTCTCTTATCATCAATTATAAGTTCTTGGGGGTGATATGATTGTCTCAGTATCCCTTTTTCCATGTTTGTTGTTCTGCCTAGGCTGCATCTGGGGCTGTGCAGTGTCAGATGATTGATATGACGTACCCAGGAGCTGTCCCAATGCATAAGGTTAGTTACCTCTTATCCATGTTTTTCTAGTTTCAATTTTTATCTGCTTTAGATTTTGAGAATAAATGAATAATTATTGGCTACTGTGTGGTGATACTGACTTGTATATCTTTGTATATGTATAAAAGGTCCATTTTGATGCGAAAACCGAATATGATATGATCCAGAATTACAAGGTTCTGCAGGATGTATTCAATAAGCTGAAAATTGAAAAGGTATGTAACCAAATGATCAACCTTTTTATCTCCTTGACACATGAAATCGGCAATGTATGTTTTAGAAGTCGAGGCCTAGATGCCGAGGGTGAATTAAGAGCTGGTTTATGGACACATCTTGAGTTATGTGTATTCTTCCTAGTAGAATAATTGTTGATGAAATGTATGATGCCTTACTACTGTTGTTTAAAACCTGATGTCTTAGTGATTGATAGCTAGGAAAATGTTCATTCTTTGCATAGTATGTTGAATGCTGAGGTTGTATGTGGCAGCACATTGAAGTCAACAGGCTTGTTAAAGGTAGACCACTGGATAACTTGGAATTCTTGCAATGGCTGAAACGCTACTGTGATTCAGTTAATGGTGGCATAATGAACGAGTATGCTAACTTCTTGCAGTTTATTTATCTGTTTTCTTCGAGTATCAGTATATAAATGATATCTTCTTTTAATTTTGTCATCAAATGTTTCTCAAATGTCTTAACAGGAACTATAATCCCGTGGAGCGACGATGTAAAGGTGGAAAGGGTGGAGCAACGATGAAGGGTTTTCAAAAGGCTGCTAAATCGCTGCAAACAAATAATATGCATAGCCTTGGCTCTGGCGACCCAGTTGAACCACGTAAAACTACTGCTCAGCTTGATCCAGTTATTTATTTCCATTAGTAACTGGCCATATAATGTCATTTGATGCCTTGTCAATCTAGGATCAAAGCCGGGGAAAACTAGCGTAACGGGCGGGGCAAATTCATCTGGAGAAATTCAAGCTTTGTCCAAGGAGGTAGACAGGCTGCAAAATAATGTCACTGCTGATTTAATTTCTACTTTGTCAAAGGACGGCTCTAACATTTTTTATCCTCTTTCTTCTCCAATGTGTTGTTTGTATTGTTTGGACTTTCCCCTCTCTTATCAGCTATTGCTTATTTTGTTGCATTTTATTTTCCCTTCTTTTGGATAGGTTACGGATCTGAAACTGTCTGTAGATCTTTTGGAAAAAGAAAGAGACTTTTACTTTGCAAAATTAAGGGACATAGAAATCTTTTGCCAGATGCCTGAATTAGAAGATCTCCCGGTAAGAGCTCCATGGATTTAGAGAAAACCTTTCAATATGAATGACTGGATAACCATACTTTTATCAAGCTCTCAACTTTCAAGAGTACATTGAAAAATAATTGTACGTTTGATAAATTGTACGTTTGATGCACAGATGGCAGCAGCAATCAAGATGATTCTGTATGCAGCAGATGCAAAGGAGTCGGCACTAGCTGACGCTCAAGAGTACATATACCAATTAAAAAATACGACCGAGGTTGAAGAAGAGGAAAATGAAGAGTGAATCTGAAGTTTCACACAAAATTTGGGCTTGTAGATTGAGCAAGAAAAAAGGCTGAAGTATTGCCAAGCTATTCCATAGTTCTCCTGAATGATCATCATCCACCATTTATGATCTCTAATGAATAGAATTCTTAGACTTGAAAACAATCCTTGTGTGTGCTGTACACCAAGGATCATGATTGTTAACTGTGACATCTCAACCATTGGATTGTAATAACAGATGCTCAAAATTAGCTTCTCATATTCTTTTTCTTGTCTGAAATGTTGCAGTACTTATCTGAGATTTTCAGGCTATCTGCAAAGTTTGACCAAC

mRNA sequence

AATGTTTAAAATTAGGGTAGTCTTGTTTGAGGTAACGCTAATTAGTTATTGGCGTTGAACAATGAATTCCGTGCACCGTTGAAATCCACAATCCGTTTTGGAAAAAGTTGAAAAATCTTCGAAATGGAAATGGAAATGGTGGGTTTGTTTTCAAATTTGGGTTTAAAGGATCGTTTCCCCCTTAATATACGGCCATAAGCCGTCCTTCATTTCCCCTTTATTTTAACATTTTTCTCCTCTCTGTTTCTTCATTCCCATCTCGATTTCTCCCCCCTCTTATGATTTGGGGTTTCTTCAAATCGATTCCTCAACATGGCCTCCAATATTGGAATGATGGACAGCGCTTATTTTGTCGGCAGGAACGAGATTTTGACATGGATCAACAATTGCCTCCAACTCAATCTCTCTCGCATTGAAGAGGCTGCATCTGGGGCTGTGCAGTGTCAGATGATTGATATGACGTACCCAGGAGCTGTCCCAATGCATAAGGTCCATTTTGATGCGAAAACCGAATATGATATGATCCAGAATTACAAGGTTCTGCAGGATGTATTCAATAAGCTGAAAATTGAAAAGCACATTGAAGTCAACAGGCTTGTTAAAGGTAGACCACTGGATAACTTGGAATTCTTGCAATGGCTGAAACGCTACTGTGATTCAGTTAATGGTGGCATAATGAACGAGAACTATAATCCCGTGGAGCGACGATGTAAAGGTGGAAAGGGTGGAGCAACGATGAAGGGTTTTCAAAAGGCTGCTAAATCGCTGCAAACAAATAATATGCATAGCCTTGGCTCTGGCGACCCAGTTGAACCACGATCAAAGCCGGGGAAAACTAGCGTAACGGGCGGGGCAAATTCATCTGGAGAAATTCAAGCTTTGTCCAAGGAGGTTACGGATCTGAAACTGTCTGTAGATCTTTTGGAAAAAGAAAGAGACTTTTACTTTGCAAAATTAAGGGACATAGAAATCTTTTGCCAGATGCCTGAATTAGAAGATCTCCCGATGGCAGCAGCAATCAAGATGATTCTGTATGCAGCAGATGCAAAGGAGTCGGCACTAGCTGACGCTCAAGAGTACATATACCAATTAAAAAATACGACCGAGGTTGAAGAAGAGGAAAATGAAGAGTGAATCTGAAGTTTCACACAAAATTTGGGCTTGTAGATTGAGCAAGAAAAAAGGCTGAAGTATTGCCAAGCTATTCCATAGTTCTCCTGAATGATCATCATCCACCATTTATGATCTCTAATGAATAGAATTCTTAGACTTGAAAACAATCCTTGTGTGTGCTGTACACCAAGGATCATGATTGTTAACTGTGACATCTCAACCATTGGATTGTAATAACAGATGCTCAAAATTAGCTTCTCATATTCTTTTTCTTGTCTGAAATGTTGCAGTACTTATCTGAGATTTTCAGGCTATCTGCAAAGTTTGACCAAC

Coding sequence (CDS)

ATGGCCTCCAATATTGGAATGATGGACAGCGCTTATTTTGTCGGCAGGAACGAGATTTTGACATGGATCAACAATTGCCTCCAACTCAATCTCTCTCGCATTGAAGAGGCTGCATCTGGGGCTGTGCAGTGTCAGATGATTGATATGACGTACCCAGGAGCTGTCCCAATGCATAAGGTCCATTTTGATGCGAAAACCGAATATGATATGATCCAGAATTACAAGGTTCTGCAGGATGTATTCAATAAGCTGAAAATTGAAAAGCACATTGAAGTCAACAGGCTTGTTAAAGGTAGACCACTGGATAACTTGGAATTCTTGCAATGGCTGAAACGCTACTGTGATTCAGTTAATGGTGGCATAATGAACGAGAACTATAATCCCGTGGAGCGACGATGTAAAGGTGGAAAGGGTGGAGCAACGATGAAGGGTTTTCAAAAGGCTGCTAAATCGCTGCAAACAAATAATATGCATAGCCTTGGCTCTGGCGACCCAGTTGAACCACGATCAAAGCCGGGGAAAACTAGCGTAACGGGCGGGGCAAATTCATCTGGAGAAATTCAAGCTTTGTCCAAGGAGGTTACGGATCTGAAACTGTCTGTAGATCTTTTGGAAAAAGAAAGAGACTTTTACTTTGCAAAATTAAGGGACATAGAAATCTTTTGCCAGATGCCTGAATTAGAAGATCTCCCGATGGCAGCAGCAATCAAGATGATTCTGTATGCAGCAGATGCAAAGGAGTCGGCACTAGCTGACGCTCAAGAGTACATATACCAATTAAAAAATACGACCGAGGTTGAAGAAGAGGAAAATGAAGAGTGA

Protein sequence

MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKVHFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERRCKGGKGGATMKGFQKAAKSLQTNNMHSLGSGDPVEPRSKPGKTSVTGGANSSGEIQALSKEVTDLKLSVDLLEKERDFYFAKLRDIEIFCQMPELEDLPMAAAIKMILYAADAKESALADAQEYIYQLKNTTEVEEEENEE

Homology

[Close]

BLAST of Sed0025877 vs. NCBI nr
Match: XP_008440447.1 (PREDICTED: microtubule-associated protein RP/EB family member 1B isoform X1 [Cucumis melo] >KAA0036070.1 microtubule-associated protein RP/EB family member 1B isoform X1 [Cucumis melo var. makuwa] >TYJ98877.1 microtubule-associated protein RP/EB family member 1B isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 497.7 bits (1280), Expect = 6.5e-137
Identity = 250/272 (91.91%), Postives = 260/272 (95.59%), Query Frame = 0


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60
           MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV
Sbjct: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60

Query: 61  HFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGG 120
           +FDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGG
Sbjct: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGG 120

Query: 121 IMNENYNPVERRCKGGKGGATMKGFQKAAKSLQTNNMHSLGSGDPVEPRSKPGKTSVTGG 180
           IMNENYNPVERRCKGGKGGATMKG QKAAKSLQT+NMHS GSGD VEPRSKPGK  +TGG
Sbjct: 121 IMNENYNPVERRCKGGKGGATMKGCQKAAKSLQTHNMHSHGSGDSVEPRSKPGKNGITGG 180

Query: 181 ANSSGEIQALSKEVTDLKLSVDLLEKERDFYFAKLRDIEIFCQMPELEDLPMAAAIKMIL 240
            NSS EIQALSKE+T+LK+SVDLLEKERDFYFAKLRDIEIFCQMPELEDLPMAAAIKMIL
Sbjct: 181 TNSSAEIQALSKEITELKMSVDLLEKERDFYFAKLRDIEIFCQMPELEDLPMAAAIKMIL 240

Query: 241 YAADAKESALADAQEYIYQLKNTTEVEEEENE 273
           YAADAKESAL +AQEYIYQ +N T+VE+E  E
Sbjct: 241 YAADAKESALTEAQEYIYQSQNRTDVEDENEE 272

[Close]

BLAST of Sed0025877 vs. NCBI nr
Match: XP_023000718.1 (microtubule-associated protein RP/EB family member 1B isoform X1 [Cucurbita maxima])

HSP 1 Score: 493.4 bits (1269), Expect = 1.2e-135
Identity = 252/273 (92.31%), Postives = 259/273 (94.87%), Query Frame = 0


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60
           MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV
Sbjct: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60

Query: 61  HFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGG 120
           +FDAKTEYDMIQNYKVLQ+VFNKLKIEKHIEVNRLVK RPLDNLEFLQWLKRYCDSVNGG
Sbjct: 61  NFDAKTEYDMIQNYKVLQEVFNKLKIEKHIEVNRLVKSRPLDNLEFLQWLKRYCDSVNGG 120

Query: 121 IMNENYNPVERRCKGGKGGATMKGFQKAAKSLQTNNMHSLGSGDPVEPRSKPGKTSVTGG 180
           IMNENYNPVERRCKGGKGG TMKG QK AKSLQTNNMHS GSGDPVE RSKPGK S TGG
Sbjct: 121 IMNENYNPVERRCKGGKGGPTMKGCQKVAKSLQTNNMHSPGSGDPVELRSKPGKNSATGG 180

Query: 181 ANSSGEIQALSKEVTDLKLSVDLLEKERDFYFAKLRDIEIFCQMPELEDLPMAAAIKMIL 240
           ANSSGEIQALSKE+TDLK+SVD+LEKERDFYFAKLRDIEIFCQMPELEDLPMAAAIKMIL
Sbjct: 181 ANSSGEIQALSKEITDLKMSVDVLEKERDFYFAKLRDIEIFCQMPELEDLPMAAAIKMIL 240

Query: 241 YAADAKESALADAQEYIYQLKNTTEVEEEENEE 274
           YAADAKESALA+AQEYIYQ K T    E+ENEE
Sbjct: 241 YAADAKESALAEAQEYIYQSKRTD--AEDENEE 271

[Close]

BLAST of Sed0025877 vs. NCBI nr
Match: XP_038893617.1 (microtubule-associated protein RP/EB family member 1B-like [Benincasa hispida])

HSP 1 Score: 492.7 bits (1267), Expect = 2.1e-135
Identity = 248/272 (91.18%), Postives = 259/272 (95.22%), Query Frame = 0


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60
           MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV
Sbjct: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60

Query: 61  HFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGG 120
           +FDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGG
Sbjct: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGG 120

Query: 121 IMNENYNPVERRCKGGKGGATMKGFQKAAKSLQTNNMHSLGSGDPVEPRSKPGKTSVTGG 180
           IMNENYNPVERRCKGGKGGATMKG QKAAKSLQT+NMH  GSGDPVEPRSKPGK  VT G
Sbjct: 121 IMNENYNPVERRCKGGKGGATMKGCQKAAKSLQTHNMHGHGSGDPVEPRSKPGKNGVTSG 180

Query: 181 ANSSGEIQALSKEVTDLKLSVDLLEKERDFYFAKLRDIEIFCQMPELEDLPMAAAIKMIL 240
           ANSSGEIQALSKE+T+LK+SVDLLEKERDFYFAKLRDIEIFCQM ELEDLPMAAAIKMIL
Sbjct: 181 ANSSGEIQALSKEITELKMSVDLLEKERDFYFAKLRDIEIFCQMSELEDLPMAAAIKMIL 240

Query: 241 YAADAKESALADAQEYIYQLKNTTEVEEEENE 273
           YAADAKESAL +AQEYIYQ ++  +V++E  E
Sbjct: 241 YAADAKESALTEAQEYIYQSQSRNDVKDENEE 272

[Close]

BLAST of Sed0025877 vs. NCBI nr
Match: XP_022924018.1 (microtubule-associated protein RP/EB family member 1B-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 491.9 bits (1265), Expect = 3.6e-135
Identity = 251/273 (91.94%), Postives = 258/273 (94.51%), Query Frame = 0


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60
           MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV
Sbjct: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60

Query: 61  HFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGG 120
           +FDAKTEYDMIQNYKVLQ+VFNKLKIEKHIEVNRLVK RPLDNLEFLQWLKRYCDSVNGG
Sbjct: 61  NFDAKTEYDMIQNYKVLQEVFNKLKIEKHIEVNRLVKSRPLDNLEFLQWLKRYCDSVNGG 120

Query: 121 IMNENYNPVERRCKGGKGGATMKGFQKAAKSLQTNNMHSLGSGDPVEPRSKPGKTSVTGG 180
           IMNENYNPVERRCKGGKGG TMKG QK AKSLQTNNMHS GSGDPVE RSKPGK   TGG
Sbjct: 121 IMNENYNPVERRCKGGKGGPTMKGCQKVAKSLQTNNMHSPGSGDPVELRSKPGKNGATGG 180

Query: 181 ANSSGEIQALSKEVTDLKLSVDLLEKERDFYFAKLRDIEIFCQMPELEDLPMAAAIKMIL 240
           ANSSGEIQALSKE+TDLK+SVD+LEKERDFYFAKLRDIEIFCQMPELEDLPMAAAIKMIL
Sbjct: 181 ANSSGEIQALSKEITDLKMSVDVLEKERDFYFAKLRDIEIFCQMPELEDLPMAAAIKMIL 240

Query: 241 YAADAKESALADAQEYIYQLKNTTEVEEEENEE 274
           YAADAKESALA+AQEYIYQ K T    E+ENEE
Sbjct: 241 YAADAKESALAEAQEYIYQSKRTD--AEDENEE 271

[Close]

BLAST of Sed0025877 vs. NCBI nr
Match: XP_023519542.1 (microtubule-associated protein RP/EB family member 1B-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 491.9 bits (1265), Expect = 3.6e-135
Identity = 251/273 (91.94%), Postives = 258/273 (94.51%), Query Frame = 0


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60
           MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV
Sbjct: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60

Query: 61  HFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGG 120
           +FDAKTEYDMIQNYKVLQ+VFNKLKIEKHIEVNRLVK RPLDNLEFLQWLKRYCDSVNGG
Sbjct: 61  NFDAKTEYDMIQNYKVLQEVFNKLKIEKHIEVNRLVKSRPLDNLEFLQWLKRYCDSVNGG 120

Query: 121 IMNENYNPVERRCKGGKGGATMKGFQKAAKSLQTNNMHSLGSGDPVEPRSKPGKTSVTGG 180
           IMNENYNPVERRCKGGKGG TMKG QK AKSLQTNNMHS GSGDPVE RSKPGK   TGG
Sbjct: 121 IMNENYNPVERRCKGGKGGLTMKGCQKVAKSLQTNNMHSPGSGDPVELRSKPGKNGATGG 180

Query: 181 ANSSGEIQALSKEVTDLKLSVDLLEKERDFYFAKLRDIEIFCQMPELEDLPMAAAIKMIL 240
           ANSSGEIQALSKE+TDLK+SVD+LEKERDFYFAKLRDIEIFCQMPELEDLPMAAAIKMIL
Sbjct: 181 ANSSGEIQALSKEITDLKMSVDVLEKERDFYFAKLRDIEIFCQMPELEDLPMAAAIKMIL 240

Query: 241 YAADAKESALADAQEYIYQLKNTTEVEEEENEE 274
           YAADAKESALA+AQEYIYQ K T    E+ENEE
Sbjct: 241 YAADAKESALAEAQEYIYQSKRTD--AEDENEE 271

[Close]

BLAST of Sed0025877 vs. ExPASy Swiss-Prot
Match: Q9FJJ5 (Microtubule-associated protein RP/EB family member 1B OS=Arabidopsis thaliana OX=3702 GN=EB1B PE=1 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 1.6e-101
Identity = 196/287 (68.29%), Postives = 227/287 (79.09%), Query Frame = 0


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60
           MA+NIGMMDSAYFVGRNEIL+WIN+ L LNLSRIEEAASGAVQCQM+DMT+PG VPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRNEILSWINDRLHLNLSRIEEAASGAVQCQMLDMTFPGVVPMHKV 60

Query: 61  HFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGG 120
           +F+AK EY+MIQNYKV+Q+VF KLKI K +EVNRLVKGRPLDNLEFLQWLKR+CDS+NGG
Sbjct: 61  NFEAKNEYEMIQNYKVMQEVFTKLKITKPLEVNRLVKGRPLDNLEFLQWLKRFCDSINGG 120

Query: 121 IMNENYNPVERRCKGGKGGATMKGFQKAAKSLQTNNMHSLGSGDPVEPRSKPG------K 180
           IMNENYNPVERR +GG+   ++KG  K +KSLQTNNMH      PV   +KP        
Sbjct: 121 IMNENYNPVERRSRGGR-EKSVKGSSKISKSLQTNNMHH----PPVATSNKPAGPKQAKS 180

Query: 181 TSVTGGANSSGEIQALSKEVTDLKLSVDLLEKERDFYFAKLRDIEIFCQMPELEDLPMAA 240
             + GG+NSS E+QALSKEV DLK+SVDLLEKERDFYF+KLRDIEI CQ PEL+DLP+  
Sbjct: 181 HGIGGGSNSSAEVQALSKEVEDLKVSVDLLEKERDFYFSKLRDIEILCQTPELDDLPIVV 240

Query: 241 AIKMILYAADAKESALADAQEYI--------YQLKNTTEVEEEENEE 274
           A+K ILYA DA ES L +AQE +        Y+ +   E EEEE EE
Sbjct: 241 AVKKILYATDANESVLEEAQECLNQSLGLEGYEEEGKEEEEEEEEEE 282

[Close]

BLAST of Sed0025877 vs. ExPASy Swiss-Prot
Match: Q7XJ60 (Microtubule-associated protein RP/EB family member 1A OS=Arabidopsis thaliana OX=3702 GN=EB1A PE=1 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 3.9e-100
Identity = 191/274 (69.71%), Postives = 219/274 (79.93%), Query Frame = 0


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60
           MA+NIGMMDSAYFVGRNEILTWIN+ L LNLSR+EEAASGAVQCQM+DMT+PG VPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRNEILTWINDRLHLNLSRVEEAASGAVQCQMLDMTFPGVVPMHKV 60

Query: 61  HFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGG 120
           +FDAK EYDMIQNYKVLQDVFNKLKI K +E+NRLVKGRPLDNLEFLQWLKR+CDS+NGG
Sbjct: 61  NFDAKNEYDMIQNYKVLQDVFNKLKITKPLEINRLVKGRPLDNLEFLQWLKRFCDSINGG 120

Query: 121 IMNENYNPVERRCKGGKGGATMKGFQKAAKSLQTNNMHSLGSGDPVEPRSKPGKTSVTGG 180
           IMNENYNPVERR + GK   ++KG  K  KSLQTNN H      P    S  G +  +G 
Sbjct: 121 IMNENYNPVERRSRNGK-ERSVKGSNKIPKSLQTNNNH------PPPNSSSVGLSKASGP 180

Query: 181 ANS-SGEIQALSKEVTDLKLSVDLLEKERDFYFAKLRDIEIFCQMPELEDLPMAAAIKMI 240
            ++ + E+QALSKE+ DLK+S DLLEKERDFYF+KLRD+EI CQ PEL+DLP+  A+K I
Sbjct: 181 KSAKAAEVQALSKELVDLKISTDLLEKERDFYFSKLRDVEILCQTPELDDLPIVVAVKKI 240

Query: 241 LYAADAKESALADAQEYIYQLKNTTEVEEEENEE 274
           LYA DA ESAL DAQEY+ Q     + E E N E
Sbjct: 241 LYATDANESALEDAQEYLNQSLGVEDDEAEGNGE 267

[Close]

BLAST of Sed0025877 vs. ExPASy Swiss-Prot
Match: Q9FGQ6 (Microtubule-associated protein RP/EB family member 1C OS=Arabidopsis thaliana OX=3702 GN=EB1C PE=1 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 8.7e-76
Identity = 157/274 (57.30%), Postives = 193/274 (70.44%), Query Frame = 0


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60
           MA+NIGMMDSAYFVGR+EIL WIN+ LQLNLS++EEA SGAV CQ++D  +PG VPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRSEILAWINSTLQLNLSKVEEACSGAVHCQLMDSVHPGTVPMHKV 60

Query: 61  HFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGG 120
           +FDAK+EY+MIQNYKVLQDVFNKLKI KHIEV++LVKGRPLDNLEF+QW+K+YCDSVNGG
Sbjct: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKKYCDSVNGG 120

Query: 121 IMNENYNPVERRCKGGKGGATMKGFQKAAKSLQTNNMHSLGSGDP----------VEPRS 180
               NY+ +ERR +  KGG   K   K A + Q +   S  S  P           EP+S
Sbjct: 121 --QHNYHALERR-EASKGG---KEATKRAAATQQSGKSSSSSAPPRPSSSNGTRKHEPQS 180

Query: 181 KPGKT--SVTG--------GANSSGEIQALSKEVTDLKLSVDLLEKERDFYFAKLRDIEI 240
               T  S TG         A  S  + A  +++T+LKL +D LEKERDFYF+KLRD+EI
Sbjct: 181 NNTGTHHSSTGNHHHSSKPSAKQSKPVPAYDEKITELKLYIDSLEKERDFYFSKLRDVEI 240

Query: 241 FCQMPELEDLPMAAAIKMILYAADAKESALADAQ 255
            CQ P+ E LP+  +IK ILYAAD ++   A+ Q
Sbjct: 241 LCQNPDTEHLPLVGSIKRILYAADGEDVGAAETQ 268

[Close]

BLAST of Sed0025877 vs. ExPASy Swiss-Prot
Match: Q66HR2 (Microtubule-associated protein RP/EB family member 1 OS=Rattus norvegicus OX=10116 GN=Mapre1 PE=1 SV=3)

HSP 1 Score: 161.4 bits (407), Expect = 1.5e-38
Identity = 99/244 (40.57%), Postives = 141/244 (57.79%), Query Frame = 0


Query: 14  VGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKVHFDAKTEYDMIQN 73
           + R+++L WIN  LQLNL++IE+  SGA  CQ +DM +PG++ + KV F AK E++ IQN
Sbjct: 15  LSRHDMLAWINESLQLNLTKIEQLCSGAAYCQFMDMLFPGSIALKKVKFQAKLEHEYIQN 74

Query: 74  YKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERRC 133
           +K+LQ  F ++ ++K I V++LVKG+  DN EF+QW K++ D+   G   + Y+PV  R 
Sbjct: 75  FKILQAGFKRMGVDKIIPVDKLVKGKFQDNFEFVQWFKKFFDANYDG---KEYDPVAAR- 134

Query: 134 KGGKGGATMKGFQKAAKSLQTNNMHSLGSGD------------PVEPRSKPGKTSVTGG- 193
              +G  T       A +L +     LGSG                P++ PG      G 
Sbjct: 135 ---QGQETAVAPSLVAPAL-SKPKKPLGSGSAAPQRPIATQRTTAAPKAGPGMVRKNPGM 194

Query: 194 ANSSGEIQALSKEVTDLKLSVDLLEKERDFYFAKLRDIEIFCQMPELEDLPMAAAIKMIL 245
            N   E   L ++V  LKL+V+ LEKERDFYF KLR+IE+ CQ  E E+ P+   I  IL
Sbjct: 195 GNGDDEAAELMQQVKVLKLTVEDLEKERDFYFGKLRNIELICQENEGENDPVLQRIVDIL 250

[Close]

BLAST of Sed0025877 vs. ExPASy Swiss-Prot
Match: Q9UPY8 (Microtubule-associated protein RP/EB family member 3 OS=Homo sapiens OX=9606 GN=MAPRE3 PE=1 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.9e-38
Identity = 106/278 (38.13%), Postives = 155/278 (55.76%), Query Frame = 0


Query: 14  VGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKVHFDAKTEYDMIQN 73
           + R+++L W+N+ L LN ++IE+  SGA  CQ +DM +PG V + KV F AK E++ I N
Sbjct: 15  LSRHDMLAWVNDSLHLNYTKIEQLCSGAAYCQFMDMLFPGCVHLRKVKFQAKLEHEYIHN 74

Query: 74  YKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERRC 133
           +KVLQ  F K+ ++K I V +LVKG+  DN EF+QW K++ D+   G   ++YNP+  R 
Sbjct: 75  FKVLQAAFKKMGVDKIIPVEKLVKGKFQDNFEFIQWFKKFFDANYDG---KDYNPLLARQ 134

Query: 134 KGGKGGATMKG---FQKAAKSLQT-----------NNMHSLGSGDPVEP----RSKPGKT 193
                     G   F K+ K + T            NM + G    V P    R  P  +
Sbjct: 135 GQDVAPPPNPGDQIFNKSKKLIGTAVPQRTSPTGPKNMQTSGRLSNVAPPCILRKNP-PS 194

Query: 194 SVTGGANSSGEIQALSKEVTDLKLSVDLLEKERDFYFAKLRDIEIFCQMPELEDLPMAAA 253
           +  GG  +  +I  L++++ DLKL+VD LEKERDFYF+KLRDIE+ CQ  E E+ P+ + 
Sbjct: 195 ARNGGHETDAQILELNQQLVDLKLTVDGLEKERDFYFSKLRDIELICQEHESENSPVISG 254

Query: 254 IKMILYAADAKESALADAQEYIYQLKNTTEVEEEENEE 274
           I  ILYA    E   A  ++         E+EE + E+
Sbjct: 255 IIGILYAT---EEGFAPPED--------DEIEEHQQED 277

[Close]

BLAST of Sed0025877 vs. ExPASy TrEMBL
Match: A0A5D3BIC9 (Microtubule-associated protein RP/EB family member 1B isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00730 PE=3 SV=1)

HSP 1 Score: 497.7 bits (1280), Expect = 3.2e-137
Identity = 250/272 (91.91%), Postives = 260/272 (95.59%), Query Frame = 0


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60
           MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV
Sbjct: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60

Query: 61  HFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGG 120
           +FDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGG
Sbjct: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGG 120

Query: 121 IMNENYNPVERRCKGGKGGATMKGFQKAAKSLQTNNMHSLGSGDPVEPRSKPGKTSVTGG 180
           IMNENYNPVERRCKGGKGGATMKG QKAAKSLQT+NMHS GSGD VEPRSKPGK  +TGG
Sbjct: 121 IMNENYNPVERRCKGGKGGATMKGCQKAAKSLQTHNMHSHGSGDSVEPRSKPGKNGITGG 180

Query: 181 ANSSGEIQALSKEVTDLKLSVDLLEKERDFYFAKLRDIEIFCQMPELEDLPMAAAIKMIL 240
            NSS EIQALSKE+T+LK+SVDLLEKERDFYFAKLRDIEIFCQMPELEDLPMAAAIKMIL
Sbjct: 181 TNSSAEIQALSKEITELKMSVDLLEKERDFYFAKLRDIEIFCQMPELEDLPMAAAIKMIL 240

Query: 241 YAADAKESALADAQEYIYQLKNTTEVEEEENE 273
           YAADAKESAL +AQEYIYQ +N T+VE+E  E
Sbjct: 241 YAADAKESALTEAQEYIYQSQNRTDVEDENEE 272

[Close]

BLAST of Sed0025877 vs. ExPASy TrEMBL
Match: A0A1S3B162 (microtubule-associated protein RP/EB family member 1B isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484862 PE=3 SV=1)

HSP 1 Score: 497.7 bits (1280), Expect = 3.2e-137
Identity = 250/272 (91.91%), Postives = 260/272 (95.59%), Query Frame = 0


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60
           MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV
Sbjct: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60

Query: 61  HFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGG 120
           +FDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGG
Sbjct: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGG 120

Query: 121 IMNENYNPVERRCKGGKGGATMKGFQKAAKSLQTNNMHSLGSGDPVEPRSKPGKTSVTGG 180
           IMNENYNPVERRCKGGKGGATMKG QKAAKSLQT+NMHS GSGD VEPRSKPGK  +TGG
Sbjct: 121 IMNENYNPVERRCKGGKGGATMKGCQKAAKSLQTHNMHSHGSGDSVEPRSKPGKNGITGG 180

Query: 181 ANSSGEIQALSKEVTDLKLSVDLLEKERDFYFAKLRDIEIFCQMPELEDLPMAAAIKMIL 240
            NSS EIQALSKE+T+LK+SVDLLEKERDFYFAKLRDIEIFCQMPELEDLPMAAAIKMIL
Sbjct: 181 TNSSAEIQALSKEITELKMSVDLLEKERDFYFAKLRDIEIFCQMPELEDLPMAAAIKMIL 240

Query: 241 YAADAKESALADAQEYIYQLKNTTEVEEEENE 273
           YAADAKESAL +AQEYIYQ +N T+VE+E  E
Sbjct: 241 YAADAKESALTEAQEYIYQSQNRTDVEDENEE 272

[Close]

BLAST of Sed0025877 vs. ExPASy TrEMBL
Match: A0A6J1KNF2 (microtubule-associated protein RP/EB family member 1B isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495082 PE=3 SV=1)

HSP 1 Score: 493.4 bits (1269), Expect = 6.0e-136
Identity = 252/273 (92.31%), Postives = 259/273 (94.87%), Query Frame = 0


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60
           MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV
Sbjct: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60

Query: 61  HFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGG 120
           +FDAKTEYDMIQNYKVLQ+VFNKLKIEKHIEVNRLVK RPLDNLEFLQWLKRYCDSVNGG
Sbjct: 61  NFDAKTEYDMIQNYKVLQEVFNKLKIEKHIEVNRLVKSRPLDNLEFLQWLKRYCDSVNGG 120

Query: 121 IMNENYNPVERRCKGGKGGATMKGFQKAAKSLQTNNMHSLGSGDPVEPRSKPGKTSVTGG 180
           IMNENYNPVERRCKGGKGG TMKG QK AKSLQTNNMHS GSGDPVE RSKPGK S TGG
Sbjct: 121 IMNENYNPVERRCKGGKGGPTMKGCQKVAKSLQTNNMHSPGSGDPVELRSKPGKNSATGG 180

Query: 181 ANSSGEIQALSKEVTDLKLSVDLLEKERDFYFAKLRDIEIFCQMPELEDLPMAAAIKMIL 240
           ANSSGEIQALSKE+TDLK+SVD+LEKERDFYFAKLRDIEIFCQMPELEDLPMAAAIKMIL
Sbjct: 181 ANSSGEIQALSKEITDLKMSVDVLEKERDFYFAKLRDIEIFCQMPELEDLPMAAAIKMIL 240

Query: 241 YAADAKESALADAQEYIYQLKNTTEVEEEENEE 274
           YAADAKESALA+AQEYIYQ K T    E+ENEE
Sbjct: 241 YAADAKESALAEAQEYIYQSKRTD--AEDENEE 271

[Close]

BLAST of Sed0025877 vs. ExPASy TrEMBL
Match: A0A6J1EB60 (microtubule-associated protein RP/EB family member 1B-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431568 PE=3 SV=1)

HSP 1 Score: 491.9 bits (1265), Expect = 1.7e-135
Identity = 251/273 (91.94%), Postives = 258/273 (94.51%), Query Frame = 0


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60
           MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV
Sbjct: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60

Query: 61  HFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGG 120
           +FDAKTEYDMIQNYKVLQ+VFNKLKIEKHIEVNRLVK RPLDNLEFLQWLKRYCDSVNGG
Sbjct: 61  NFDAKTEYDMIQNYKVLQEVFNKLKIEKHIEVNRLVKSRPLDNLEFLQWLKRYCDSVNGG 120

Query: 121 IMNENYNPVERRCKGGKGGATMKGFQKAAKSLQTNNMHSLGSGDPVEPRSKPGKTSVTGG 180
           IMNENYNPVERRCKGGKGG TMKG QK AKSLQTNNMHS GSGDPVE RSKPGK   TGG
Sbjct: 121 IMNENYNPVERRCKGGKGGPTMKGCQKVAKSLQTNNMHSPGSGDPVELRSKPGKNGATGG 180

Query: 181 ANSSGEIQALSKEVTDLKLSVDLLEKERDFYFAKLRDIEIFCQMPELEDLPMAAAIKMIL 240
           ANSSGEIQALSKE+TDLK+SVD+LEKERDFYFAKLRDIEIFCQMPELEDLPMAAAIKMIL
Sbjct: 181 ANSSGEIQALSKEITDLKMSVDVLEKERDFYFAKLRDIEIFCQMPELEDLPMAAAIKMIL 240

Query: 241 YAADAKESALADAQEYIYQLKNTTEVEEEENEE 274
           YAADAKESALA+AQEYIYQ K T    E+ENEE
Sbjct: 241 YAADAKESALAEAQEYIYQSKRTD--AEDENEE 271

[Close]

BLAST of Sed0025877 vs. ExPASy TrEMBL
Match: A0A6J1GCD6 (microtubule-associated protein RP/EB family member 1B-like OS=Cucurbita moschata OX=3662 GN=LOC111452886 PE=3 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 2.1e-133
Identity = 247/272 (90.81%), Postives = 256/272 (94.12%), Query Frame = 0


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60
           MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV
Sbjct: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60

Query: 61  HFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGG 120
           +FDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGR LDNLEFLQWLKRYCDSVNGG
Sbjct: 61  NFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRTLDNLEFLQWLKRYCDSVNGG 120

Query: 121 IMNENYNPVERRCKGGKGGATMKGFQKAAKSLQTNNMHSLGSGDPVEPRSKPGKTSVTGG 180
           IMNENYNPVERRCKG KGG  MKG QKAAKSLQT+N+HS GS DPVEPRSKPGK  VT  
Sbjct: 121 IMNENYNPVERRCKGVKGGVVMKGCQKAAKSLQTHNIHSPGSCDPVEPRSKPGKNGVTSR 180

Query: 181 ANSSGEIQALSKEVTDLKLSVDLLEKERDFYFAKLRDIEIFCQMPELEDLPMAAAIKMIL 240
            +SSGEIQALSKE+T+LKLSVDLLEKERDFYFAKLRDIEIFCQMPELE+LPMAAAIKMIL
Sbjct: 181 GHSSGEIQALSKEITELKLSVDLLEKERDFYFAKLRDIEIFCQMPELEELPMAAAIKMIL 240

Query: 241 YAADAKESALADAQEYIYQLKNTTEVEEEENE 273
           YAADAKESALA+AQEYIYQ KNTT VE+E  E
Sbjct: 241 YAADAKESALAEAQEYIYQSKNTTNVEDENEE 272

[Close]

BLAST of Sed0025877 vs. TAIR 10
Match: AT5G62500.1 (end binding protein 1B )

HSP 1 Score: 370.5 bits (950), Expect = 1.1e-102
Identity = 196/287 (68.29%), Postives = 227/287 (79.09%), Query Frame = 0


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60
           MA+NIGMMDSAYFVGRNEIL+WIN+ L LNLSRIEEAASGAVQCQM+DMT+PG VPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRNEILSWINDRLHLNLSRIEEAASGAVQCQMLDMTFPGVVPMHKV 60

Query: 61  HFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGG 120
           +F+AK EY+MIQNYKV+Q+VF KLKI K +EVNRLVKGRPLDNLEFLQWLKR+CDS+NGG
Sbjct: 61  NFEAKNEYEMIQNYKVMQEVFTKLKITKPLEVNRLVKGRPLDNLEFLQWLKRFCDSINGG 120

Query: 121 IMNENYNPVERRCKGGKGGATMKGFQKAAKSLQTNNMHSLGSGDPVEPRSKPG------K 180
           IMNENYNPVERR +GG+   ++KG  K +KSLQTNNMH      PV   +KP        
Sbjct: 121 IMNENYNPVERRSRGGR-EKSVKGSSKISKSLQTNNMHH----PPVATSNKPAGPKQAKS 180

Query: 181 TSVTGGANSSGEIQALSKEVTDLKLSVDLLEKERDFYFAKLRDIEIFCQMPELEDLPMAA 240
             + GG+NSS E+QALSKEV DLK+SVDLLEKERDFYF+KLRDIEI CQ PEL+DLP+  
Sbjct: 181 HGIGGGSNSSAEVQALSKEVEDLKVSVDLLEKERDFYFSKLRDIEILCQTPELDDLPIVV 240

Query: 241 AIKMILYAADAKESALADAQEYI--------YQLKNTTEVEEEENEE 274
           A+K ILYA DA ES L +AQE +        Y+ +   E EEEE EE
Sbjct: 241 AVKKILYATDANESVLEEAQECLNQSLGLEGYEEEGKEEEEEEEEEE 282

[Close]

BLAST of Sed0025877 vs. TAIR 10
Match: AT3G47690.1 (microtubule end binding protein EB1A )

HSP 1 Score: 365.9 bits (938), Expect = 2.8e-101
Identity = 191/274 (69.71%), Postives = 219/274 (79.93%), Query Frame = 0


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60
           MA+NIGMMDSAYFVGRNEILTWIN+ L LNLSR+EEAASGAVQCQM+DMT+PG VPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRNEILTWINDRLHLNLSRVEEAASGAVQCQMLDMTFPGVVPMHKV 60

Query: 61  HFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGG 120
           +FDAK EYDMIQNYKVLQDVFNKLKI K +E+NRLVKGRPLDNLEFLQWLKR+CDS+NGG
Sbjct: 61  NFDAKNEYDMIQNYKVLQDVFNKLKITKPLEINRLVKGRPLDNLEFLQWLKRFCDSINGG 120

Query: 121 IMNENYNPVERRCKGGKGGATMKGFQKAAKSLQTNNMHSLGSGDPVEPRSKPGKTSVTGG 180
           IMNENYNPVERR + GK   ++KG  K  KSLQTNN H      P    S  G +  +G 
Sbjct: 121 IMNENYNPVERRSRNGK-ERSVKGSNKIPKSLQTNNNH------PPPNSSSVGLSKASGP 180

Query: 181 ANS-SGEIQALSKEVTDLKLSVDLLEKERDFYFAKLRDIEIFCQMPELEDLPMAAAIKMI 240
            ++ + E+QALSKE+ DLK+S DLLEKERDFYF+KLRD+EI CQ PEL+DLP+  A+K I
Sbjct: 181 KSAKAAEVQALSKELVDLKISTDLLEKERDFYFSKLRDVEILCQTPELDDLPIVVAVKKI 240

Query: 241 LYAADAKESALADAQEYIYQLKNTTEVEEEENEE 274
           LYA DA ESAL DAQEY+ Q     + E E N E
Sbjct: 241 LYATDANESALEDAQEYLNQSLGVEDDEAEGNGE 267

[Close]

BLAST of Sed0025877 vs. TAIR 10
Match: AT5G67270.1 (end binding protein 1C )

HSP 1 Score: 285.0 bits (728), Expect = 6.2e-77
Identity = 157/274 (57.30%), Postives = 193/274 (70.44%), Query Frame = 0


Query: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60
           MA+NIGMMDSAYFVGR+EIL WIN+ LQLNLS++EEA SGAV CQ++D  +PG VPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRSEILAWINSTLQLNLSKVEEACSGAVHCQLMDSVHPGTVPMHKV 60

Query: 61  HFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGG 120
           +FDAK+EY+MIQNYKVLQDVFNKLKI KHIEV++LVKGRPLDNLEF+QW+K+YCDSVNGG
Sbjct: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKKYCDSVNGG 120

Query: 121 IMNENYNPVERRCKGGKGGATMKGFQKAAKSLQTNNMHSLGSGDP----------VEPRS 180
               NY+ +ERR +  KGG   K   K A + Q +   S  S  P           EP+S
Sbjct: 121 --QHNYHALERR-EASKGG---KEATKRAAATQQSGKSSSSSAPPRPSSSNGTRKHEPQS 180

Query: 181 KPGKT--SVTG--------GANSSGEIQALSKEVTDLKLSVDLLEKERDFYFAKLRDIEI 240
               T  S TG         A  S  + A  +++T+LKL +D LEKERDFYF+KLRD+EI
Sbjct: 181 NNTGTHHSSTGNHHHSSKPSAKQSKPVPAYDEKITELKLYIDSLEKERDFYFSKLRDVEI 240

Query: 241 FCQMPELEDLPMAAAIKMILYAADAKESALADAQ 255
            CQ P+ E LP+  +IK ILYAAD ++   A+ Q
Sbjct: 241 LCQNPDTEHLPLVGSIKRILYAADGEDVGAAETQ 268

The following BLAST results are available for this feature:

BLAST of Sed0025877 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008440447.1	6.5e-137	91.91	PREDICTED: microtubule-associated protein RP/EB family member 1B isoform X1 [Cuc...	[more]
XP_023000718.1	1.2e-135	92.31	microtubule-associated protein RP/EB family member 1B isoform X1 [Cucurbita maxi...	[more]
XP_038893617.1	2.1e-135	91.18	microtubule-associated protein RP/EB family member 1B-like [Benincasa hispida]	[more]
XP_022924018.1	3.6e-135	91.94	microtubule-associated protein RP/EB family member 1B-like isoform X1 [Cucurbita...	[more]
XP_023519542.1	3.6e-135	91.94	microtubule-associated protein RP/EB family member 1B-like isoform X1 [Cucurbita...	[more]

BLAST of Sed0025877 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJJ5	1.6e-101	68.29	Microtubule-associated protein RP/EB family member 1B OS=Arabidopsis thaliana OX...	[more]
Q7XJ60	3.9e-100	69.71	Microtubule-associated protein RP/EB family member 1A OS=Arabidopsis thaliana OX...	[more]
Q9FGQ6	8.7e-76	57.30	Microtubule-associated protein RP/EB family member 1C OS=Arabidopsis thaliana OX...	[more]
Q66HR2	1.5e-38	40.57	Microtubule-associated protein RP/EB family member 1 OS=Rattus norvegicus OX=101...	[more]
Q9UPY8	1.9e-38	38.13	Microtubule-associated protein RP/EB family member 3 OS=Homo sapiens OX=9606 GN=...	[more]

BLAST of Sed0025877 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BIC9	3.2e-137	91.91	Microtubule-associated protein RP/EB family member 1B isoform X1 OS=Cucumis melo...	[more]
A0A1S3B162	3.2e-137	91.91	microtubule-associated protein RP/EB family member 1B isoform X1 OS=Cucumis melo...	[more]
A0A6J1KNF2	6.0e-136	92.31	microtubule-associated protein RP/EB family member 1B isoform X1 OS=Cucurbita ma...	[more]
A0A6J1EB60	1.7e-135	91.94	microtubule-associated protein RP/EB family member 1B-like isoform X1 OS=Cucurbi...	[more]
A0A6J1GCD6	2.1e-133	90.81	microtubule-associated protein RP/EB family member 1B-like OS=Cucurbita moschata...	[more]

BLAST of Sed0025877 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G62500.1	1.1e-102	68.29	end binding protein 1B	[more]
AT3G47690.1	2.8e-101	69.71	microtubule end binding protein EB1A	[more]
AT5G67270.1	6.2e-77	57.30	end binding protein 1C	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 187..207
None	No IPR available	GENE3D	1.20.5.1430		coord: 185..273 e-value: 2.0E-22 score: 80.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..184
None	No IPR available	PANTHER	PTHR10623:SF29	MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER 1B	coord: 1..270
IPR004953	EB1, C-terminal	PFAM	PF03271	EB1	coord: 204..242 e-value: 5.1E-19 score: 68.2
IPR004953	EB1, C-terminal	PROSITE	PS51230	EB1_C	coord: 179..249 score: 15.352888
IPR001715	Calponin homology domain	PFAM	PF00307	CH	coord: 16..114 e-value: 4.3E-11 score: 42.9
IPR001715	Calponin homology domain	PROSITE	PS50021	CH	coord: 13..115 score: 16.735811
IPR036872	CH domain superfamily	GENE3D	1.10.418.10		coord: 6..134 e-value: 4.3E-52 score: 177.6
IPR036872	CH domain superfamily	SUPERFAMILY	47576	Calponin-homology domain, CH-domain	coord: 5..132
IPR027328	Microtubule-associated protein RP/EB	PANTHER	PTHR10623	MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER	coord: 1..270
IPR036133	EB1, C-terminal domain superfamily	SUPERFAMILY	140612	EB1 dimerisation domain-like	coord: 186..245

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0025877.1	Sed0025877.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051301	cell division
biological_process	GO:1904825	protein localization to microtubule plus-end
biological_process	GO:0031110	regulation of microtubule polymerization or depolymerization
biological_process	GO:0051225	spindle assembly
biological_process	GO:0009652	thigmotropism
cellular_component	GO:0005881	cytoplasmic microtubule
cellular_component	GO:0005815	microtubule organizing center
cellular_component	GO:0035371	microtubule plus-end
cellular_component	GO:0051233	spindle midzone
molecular_function	GO:0051010	microtubule plus-end binding
molecular_function	GO:0008017	microtubule binding
molecular_function	GO:0005515	protein binding