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Sed0025839 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTCAAACTTCCCAATTCCTCCATCCATCTCTTAAACCAAATACAATGCCCCACTCCTTCAAATTAGCTCCATTTTTGGGCTTAGCCATTGGCATTTGTATGGCTGTGCCAGCCTTAGCCACTGTTTACACCGTTGGCGACTCCGCTGGTTGGTCCATGGGTGTCGATTACCCCTCCTGGACTTCGGGGAAGACCTTCGCCGTCGGCGACAGCATCGGTCAGTCAAGCAATTGCCCTTTTCAATTCCTCAAAAAAAAAAATTACAAAATGAAAATTTGAAACATTTCATTTCATTTTAACTCCCCTGCCAAAACCCTTTTTAAAATTTATAAAATTGGGTTATTATTTTAGGTTTTTGAGTTGATTATTGATTTAACATGATTTATTATGAAAGTGTTTGGATGATGACTTAGTTTAAAAAATTATTTTGAATAGTTATAAATATTGAAAAATAAACCGTTAAAAATTTAGTTATTTTTTAAGGAGTTAAAAGACAATTTGTTTGGATATGAATCTAAAATCAATAGTTATTTTTACTAATTAAAAAATAAACGGTTAAAAATTTAGTTATTTTTTAGGAGTTGGAAATGAAAAATTATTTCGAGTAATTAAAAATGAATGATTAAAAATAAGTGATTAGAAATAATGAATTATTTTTTATGATAAAAAGAGAATTTTTAAATAATTAAAATACTAAATTTGGATATAATTTTTTAAATATTATTTGAGGGGCCGTTTGTTTGACATATTTAGGTAAGAGTTAGTTCTAGGATTTATTAACTCCTCCTTAAAAACCTACATTCACACGAATTTTTATTAACTCCTCTTCATTTTTACTTTTAAAAATAAGTCTCATTTCTAATAGTTCATTTTTAATAATTTATTTATAACTACTCAATTATTTCTAACAACTTATTTTTTAATTATTCTTTTCAAATCAATTAAAATAACTCATTTTCAACAATTCATTTTTAATCATTTATTTTTTAACTACTAAAAATAACTACTCATTTTTAAATCTACATCCAAACAAGGTTTTGAGTCTAACCTCCTTATACAAAAACTACTCTCAAACGAGTCTTTGACACAACTCTCAATTTTGAACTTCTCAACATAACTCCTCAATATAACTGTTTAACCCAAAAACTACCTAAATATGTCAATCAAACCGCCCCTAATTGTTAGTTTAAATTTTTTTGATTGATCGATAATTTAACATAATCTATGGTGCCAGTGTTCCTTTACCAAAGCGGGCACAGGGTGGACGAAGTTACCGCCGGTGACTATAGCTCTTGCACTGCGGCCAATTCAATTTCAAGCGACAGCTCCGGCGCCACCACCATTACTCTCAAAAAACCAGGGCCCCATTACTTCATTTGCGGAGCATTTGGTCACTGTGGCAGCGGCATGAAGCTGGCCGTCACCGCCGCCGACGCCGGAGCTCCGACGGCTACAACCCCAGCTCCCACCGGCGATGAAGCTCCGCCGTCCGCGCCGCCAACTTCTCTCGGAAATGGTGCCCCAACAGAGCCATTGCTTGGCGGTACTTCCAAAGACACGGACTCGCCGGCCACGAATGTTCCGGTGGAGGCGTCTTCGGCTGGTGGGGTCTCTGCTTTTGCGGCGGCGGTTGGCGCTTGGGGCGCCGCCGCCCTTTTGGTTGTCGTTTAGATTCCCACTACAACATGTTTGGTCAGTGTGGAGGCAGTGCCTTTTTATGAAAATTCTTGTTCTGTTTTGGGTCTTTTTGTCTTATGGATGGGGAATGTTGTATTTGTTTTTCTAAATTAAAATTTTAGTATCTATATCTACTATAGTCTGAATTAAAATTTTAATTGAA CTTCAAACTTCCCAATTCCTCCATCCATCTCTTAAACCAAATACAATGCCCCACTCCTTCAAATTAGCTCCATTTTTGGGCTTAGCCATTGGCATTTGTATGGCTGTGCCAGCCTTAGCCACTGTTTACACCGTTGGCGACTCCGCTGGTTGGTCCATGGGTGTCGATTACCCCTCCTGGACTTCGGGGAAGACCTTCGCCGTCGGCGACAGCATCGTGTTCCTTTACCAAAGCGGGCACAGGGTGGACGAAGTTACCGCCGGTGACTATAGCTCTTGCACTGCGGCCAATTCAATTTCAAGCGACAGCTCCGGCGCCACCACCATTACTCTCAAAAAACCAGGGCCCCATTACTTCATTTGCGGAGCATTTGGTCACTGTGGCAGCGGCATGAAGCTGGCCGTCACCGCCGCCGACGCCGGAGCTCCGACGGCTACAACCCCAGCTCCCACCGGCGATGAAGCTCCGCCGTCCGCGCCGCCAACTTCTCTCGGAAATGGTGCCCCAACAGAGCCATTGCTTGGCGGTACTTCCAAAGACACGGACTCGCCGGCCACGAATGTTCCGGTGGAGGCGTCTTCGGCTGGTGGGGTCTCTGCTTTTGCGGCGGCGGTTGGCGCTTGGGGCGCCGCCGCCCTTTTGGTTGTCGTTTAGATTCCCACTACAACATGTTTGGTCAGTGTGGAGGCAGTGCCTTTTTATGAAAATTCTTGTTCTGTTTTGGGTCTTTTTGTCTTATGGATGGGGAATGTTGTATTTGTTTTTCTAAATTAAAATTTTAGTATCTATATCTACTATAGTCTGAATTAAAATTTTAATTGAA ATGCCCCACTCCTTCAAATTAGCTCCATTTTTGGGCTTAGCCATTGGCATTTGTATGGCTGTGCCAGCCTTAGCCACTGTTTACACCGTTGGCGACTCCGCTGGTTGGTCCATGGGTGTCGATTACCCCTCCTGGACTTCGGGGAAGACCTTCGCCGTCGGCGACAGCATCGTGTTCCTTTACCAAAGCGGGCACAGGGTGGACGAAGTTACCGCCGGTGACTATAGCTCTTGCACTGCGGCCAATTCAATTTCAAGCGACAGCTCCGGCGCCACCACCATTACTCTCAAAAAACCAGGGCCCCATTACTTCATTTGCGGAGCATTTGGTCACTGTGGCAGCGGCATGAAGCTGGCCGTCACCGCCGCCGACGCCGGAGCTCCGACGGCTACAACCCCAGCTCCCACCGGCGATGAAGCTCCGCCGTCCGCGCCGCCAACTTCTCTCGGAAATGGTGCCCCAACAGAGCCATTGCTTGGCGGTACTTCCAAAGACACGGACTCGCCGGCCACGAATGTTCCGGTGGAGGCGTCTTCGGCTGGTGGGGTCTCTGCTTTTGCGGCGGCGGTTGGCGCTTGGGGCGCCGCCGCCCTTTTGGTTGTCGTTTAG MPHSFKLAPFLGLAIGICMAVPALATVYTVGDSAGWSMGVDYPSWTSGKTFAVGDSIVFLYQSGHRVDEVTAGDYSSCTAANSISSDSSGATTITLKKPGPHYFICGAFGHCGSGMKLAVTAADAGAPTATTPAPTGDEAPPSAPPTSLGNGAPTEPLLGGTSKDTDSPATNVPVEASSAGGVSAFAAAVGAWGAAALLVVV Homology
BLAST of Sed0025839 vs. NCBI nr
Match: XP_023547035.1 (blue copper protein-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 250.4 bits (638), Expect = 1.3e-62 Identity = 137/203 (67.49%), Postives = 155/203 (76.35%), Query Frame = 0
BLAST of Sed0025839 vs. NCBI nr
Match: XP_022962260.1 (blue copper protein-like [Cucurbita moschata]) HSP 1 Score: 243.0 bits (619), Expect = 2.2e-60 Identity = 134/203 (66.01%), Postives = 152/203 (74.88%), Query Frame = 0
BLAST of Sed0025839 vs. NCBI nr
Match: KAG7029645.1 (hypothetical protein SDJN02_07985, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 242.3 bits (617), Expect = 3.7e-60 Identity = 134/203 (66.01%), Postives = 152/203 (74.88%), Query Frame = 0
BLAST of Sed0025839 vs. NCBI nr
Match: KAG6598703.1 (hypothetical protein SDJN03_08481, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 242.3 bits (617), Expect = 3.7e-60 Identity = 134/203 (66.01%), Postives = 152/203 (74.88%), Query Frame = 0
BLAST of Sed0025839 vs. NCBI nr
Match: XP_022997261.1 (blue copper protein-like [Cucurbita maxima]) HSP 1 Score: 240.7 bits (613), Expect = 1.1e-59 Identity = 135/203 (66.50%), Postives = 152/203 (74.88%), Query Frame = 0
BLAST of Sed0025839 vs. ExPASy Swiss-Prot
Match: Q41001 (Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 2.6e-32 Identity = 89/185 (48.11%), Postives = 113/185 (61.08%), Query Frame = 0
BLAST of Sed0025839 vs. ExPASy Swiss-Prot
Match: Q96316 (Uclacyanin-3 OS=Arabidopsis thaliana OX=3702 GN=UCC3 PE=2 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 2.1e-18 Identity = 60/161 (37.27%), Postives = 90/161 (55.90%), Query Frame = 0
BLAST of Sed0025839 vs. ExPASy Swiss-Prot
Match: O80517 (Uclacyanin-2 OS=Arabidopsis thaliana OX=3702 GN=At2g44790 PE=2 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 3.6e-18 Identity = 71/186 (38.17%), Postives = 92/186 (49.46%), Query Frame = 0
BLAST of Sed0025839 vs. ExPASy Swiss-Prot
Match: O82081 (Uclacyanin 1 OS=Arabidopsis thaliana OX=3702 GN=UCC1 PE=1 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 6.8e-17 Identity = 61/174 (35.06%), Postives = 91/174 (52.30%), Query Frame = 0
BLAST of Sed0025839 vs. ExPASy Swiss-Prot
Match: P60496 (Chemocyanin OS=Lilium longiflorum OX=4690 PE=1 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 2.0e-16 Identity = 50/102 (49.02%), Postives = 59/102 (57.84%), Query Frame = 0
BLAST of Sed0025839 vs. ExPASy TrEMBL
Match: A0A6J1HEJ3 (blue copper protein-like OS=Cucurbita moschata OX=3662 GN=LOC111462762 PE=4 SV=1) HSP 1 Score: 243.0 bits (619), Expect = 1.0e-60 Identity = 134/203 (66.01%), Postives = 152/203 (74.88%), Query Frame = 0
BLAST of Sed0025839 vs. ExPASy TrEMBL
Match: A0A6J1K713 (blue copper protein-like OS=Cucurbita maxima OX=3661 GN=LOC111492220 PE=4 SV=1) HSP 1 Score: 240.7 bits (613), Expect = 5.2e-60 Identity = 135/203 (66.50%), Postives = 152/203 (74.88%), Query Frame = 0
BLAST of Sed0025839 vs. ExPASy TrEMBL
Match: A0A6J1BV33 (blue copper protein-like OS=Momordica charantia OX=3673 GN=LOC111004990 PE=4 SV=1) HSP 1 Score: 229.9 bits (585), Expect = 9.1e-57 Identity = 137/207 (66.18%), Postives = 154/207 (74.40%), Query Frame = 0
BLAST of Sed0025839 vs. ExPASy TrEMBL
Match: A0A5A7VD52 (Blue copper protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004650 PE=4 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 3.4e-51 Identity = 132/214 (61.68%), Postives = 151/214 (70.56%), Query Frame = 0
BLAST of Sed0025839 vs. ExPASy TrEMBL
Match: A0A0A0LLQ1 (Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G369150 PE=4 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 3.4e-51 Identity = 130/212 (61.32%), Postives = 152/212 (71.70%), Query Frame = 0
BLAST of Sed0025839 vs. TAIR 10
Match: AT1G72230.1 (Cupredoxin superfamily protein ) HSP 1 Score: 122.5 bits (306), Expect = 3.9e-28 Identity = 66/121 (54.55%), Postives = 78/121 (64.46%), Query Frame = 0
BLAST of Sed0025839 vs. TAIR 10
Match: AT1G22480.1 (Cupredoxin superfamily protein ) HSP 1 Score: 120.6 bits (301), Expect = 1.5e-27 Identity = 64/111 (57.66%), Postives = 73/111 (65.77%), Query Frame = 0
BLAST of Sed0025839 vs. TAIR 10
Match: AT3G60270.1 (Cupredoxin superfamily protein ) HSP 1 Score: 95.9 bits (237), Expect = 4.0e-20 Identity = 61/147 (41.50%), Postives = 80/147 (54.42%), Query Frame = 0
BLAST of Sed0025839 vs. TAIR 10
Match: AT3G60280.1 (uclacyanin 3 ) HSP 1 Score: 94.0 bits (232), Expect = 1.5e-19 Identity = 60/161 (37.27%), Postives = 90/161 (55.90%), Query Frame = 0
BLAST of Sed0025839 vs. TAIR 10
Match: AT2G44790.1 (uclacyanin 2 ) HSP 1 Score: 93.2 bits (230), Expect = 2.6e-19 Identity = 71/186 (38.17%), Postives = 92/186 (49.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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