Sed0025837 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTTTTCTAGGAAATGTGTCCGAACACTTGAAACTTGCAGGAATGAAGCTTCTACAAGACATGTATGCATTGATGATGGCAACAGCTTCAGAAAGTCTTTTCATCGAGAAGACTAGTAACATATTCGATGACCATTCGATATCGGTTGATAATCAAGATCGACGATCCCACGATGGTAAACTGGGGGATAAGTCATCGACAAAGTCGAATGAAAGTAATCAGCCTTCAAGTTATGGTCAAGAAAAGATTGTGCTTGGGGAAATAGCTTCTTCTATTTAA ATGAGTTTTCTAGGAAATGTGTCCGAACACTTGAAACTTGCAGGAATGAAGCTTCTACAAGACATGTATGCATTGATGATGGCAACAGCTTCAGAAAGTCTTTTCATCGAGAAGACTAGTAACATATTCGATGACCATTCGATATCGGTTGATAATCAAGATCGACGATCCCACGATGGTAAACTGGGGGATAAGTCATCGACAAAGTCGAATGAAAGTAATCAGCCTTCAAGTTATGGTCAAGAAAAGATTGTGCTTGGGGAAATAGCTTCTTCTATTTAA ATGAGTTTTCTAGGAAATGTGTCCGAACACTTGAAACTTGCAGGAATGAAGCTTCTACAAGACATGTATGCATTGATGATGGCAACAGCTTCAGAAAGTCTTTTCATCGAGAAGACTAGTAACATATTCGATGACCATTCGATATCGGTTGATAATCAAGATCGACGATCCCACGATGGTAAACTGGGGGATAAGTCATCGACAAAGTCGAATGAAAGTAATCAGCCTTCAAGTTATGGTCAAGAAAAGATTGTGCTTGGGGAAATAGCTTCTTCTATTTAA MSFLGNVSEHLKLAGMKLLQDMYALMMATASESLFIEKTSNIFDDHSISVDNQDRRSHDGKLGDKSSTKSNESNQPSSYGQEKIVLGEIASSI Homology
BLAST of Sed0025837 vs. NCBI nr
Match: XP_038874738.1 (uncharacterized protein LOC120067276 [Benincasa hispida]) HSP 1 Score: 94.4 bits (233), Expect = 5.7e-16 Identity = 53/72 (73.61%), Postives = 58/72 (80.56%), Query Frame = 0
BLAST of Sed0025837 vs. NCBI nr
Match: XP_023006667.1 (uncharacterized protein LOC111499323 [Cucurbita maxima]) HSP 1 Score: 90.5 bits (223), Expect = 8.2e-15 Identity = 52/72 (72.22%), Postives = 57/72 (79.17%), Query Frame = 0
BLAST of Sed0025837 vs. NCBI nr
Match: KAG7013731.1 (hypothetical protein SDJN02_23898 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 89.0 bits (219), Expect = 2.4e-14 Identity = 50/72 (69.44%), Postives = 57/72 (79.17%), Query Frame = 0
BLAST of Sed0025837 vs. NCBI nr
Match: KAG6575171.1 (hypothetical protein SDJN03_25810, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 89.0 bits (219), Expect = 2.4e-14 Identity = 50/72 (69.44%), Postives = 57/72 (79.17%), Query Frame = 0
BLAST of Sed0025837 vs. NCBI nr
Match: XP_022959506.1 (uncharacterized protein LOC111460466 [Cucurbita moschata]) HSP 1 Score: 89.0 bits (219), Expect = 2.4e-14 Identity = 50/72 (69.44%), Postives = 57/72 (79.17%), Query Frame = 0
BLAST of Sed0025837 vs. ExPASy TrEMBL
Match: A0A6J1KWG6 (uncharacterized protein LOC111499323 OS=Cucurbita maxima OX=3661 GN=LOC111499323 PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 4.0e-15 Identity = 52/72 (72.22%), Postives = 57/72 (79.17%), Query Frame = 0
BLAST of Sed0025837 vs. ExPASy TrEMBL
Match: A0A6J1H517 (uncharacterized protein LOC111460466 OS=Cucurbita moschata OX=3662 GN=LOC111460466 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 1.2e-14 Identity = 50/72 (69.44%), Postives = 57/72 (79.17%), Query Frame = 0
BLAST of Sed0025837 vs. ExPASy TrEMBL
Match: A0A5D3BXP9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G001010 PE=4 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 8.6e-10 Identity = 42/70 (60.00%), Postives = 50/70 (71.43%), Query Frame = 0
BLAST of Sed0025837 vs. ExPASy TrEMBL
Match: A0A6J1DSC5 (uncharacterized protein LOC111023072 OS=Momordica charantia OX=3673 GN=LOC111023072 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.9e-09 Identity = 41/64 (64.06%), Postives = 49/64 (76.56%), Query Frame = 0
BLAST of Sed0025837 vs. ExPASy TrEMBL
Match: A0A1S3C7F7 (uncharacterized protein LOC103497729 OS=Cucumis melo OX=3656 GN=LOC103497729 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 1.2e-08 Identity = 40/68 (58.82%), Postives = 48/68 (70.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|