Sed0025818 (gene) Chayote v1

Overview


Name	Sed0025818
Type	gene
Organism	Sechium edule (Chayote v1)
Description	AWPM-19-like family protein
Location	LG08: 38989545 .. 38991272 (+)
RNA-Seq Expression	Sed0025818
Synteny	Sed0025818

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTTTTTCAATCCTCAACTCTCAACTTTTGGATCTTTTTCTCAATCAACCTTTTCTCTCTGAATTCACTGTAGAAATGGCTGATACACAGATGAAATCCATTGCCACTCTGCTTCTGTTGCTGAACTTCTGCATGTATGCAATCATTTTGGGCATTGGTGGATGGGCCATGAACACTGCTATTGATCATGGCTTCATCATTGGTACAATCCAAGTCCTTGTTTCATCTCTTTTGTTTCTTCTTGTGTCCAGGCCAGTTTATGCACACATCGACTTCATAATTCGAAACATACTATTACTGTTGTCCCAGAAAGAACTTTGATATTATGTACATGTCAATACATATTTGTCATTTCTTGCTTTTTGTTCATCTTGAACTTGTTTGGTTGTGTTTCTTCATGTTACTGAGTGGGAATTTTGCAGGTCCTGATTTGCGACTACCGGCACATTTTTCGCCAATTTACTTCCCCATGGGGAATGCAGCCACTGGTTTCTTTGTGACATTTGCTTTGTTGGCTGCTGTCTTTGGAGCTGCCTCAGCAATCTCAGGACTGAACCATATTCGCTCATGGAGCGCTGAAAGCTTGGGTGCTGCATCCTCTGCTGCTGTTTTTGCTTGGACTCTCACCATCCTTGCCATGGGGTATGACTTCCCATCTCCATCCTCCCTCCCCTTCTTTTTGGAAAAAATTATGTTAGTTTGTTCTTTCGGTTCATCCCCAAAGGGTGGCACAATGGTCGAAAGTTTGGGGTTTGAAGGTGTGCTTGCCTCAAAGTGTCAGGTTCGAGACTCACCTATAACATTAATTTGTAGATACCTCATGTGTCTCCATTCCTTCGATGTCTCCTAGTGCTTGGCTCAGGGATGGACATGGTTATCCCGGGTATAGTGGAGTGAAACTTTGATGTCATGGTTTCCAAAAAAAAGTTCTTTCTTTCAGTTCATGAAATTTTTACGCTGTCAACTTCGTCACGAGTTTCTTGGCCGAGAATATATGTGACTAACCAATTGAACTATGCTTAGATTAATAAAGGAGGATATGTTTGAAAGTTTTAACTGAACTCTGATGTTTTGTTATTTATGCAGCTTTGCTTGCAAAGAGATTGCACTAGATTTCAGAAACACAAGACTGGTGAGAAAAATAACTTTTGTTACCAGTCTACAATATCTTTCACAAATTTAATCTAAAAGGATCCCAATTCAAATTATTTTGATATGACAAGGATTTACATCTGTTTGCAGATAACAATGGAGGCTTTTTTCATTATTCTCTCTGCTACACAACTTGTTTACATTATGGCCATCCATGGTGCTGTGTCCACAAGATGAGAGCTGAATTTGTTTGATTCACTGTCCATTTTTAATTGTATTTGATGTTTTTTTCCTTTGTTTTATCTGACCATCTGCAAACCTTGCAACTTGTAAGGAGCTTAATTTAGGAGATTATTTTTTTGTGATGTGTGTGATGTGATTTCATTTGTACAAGTATTTACAATAAACTTGGTTTGATTGCACTGGATTTCATTTATCTATTTTTGTATATGTATGAGTGCTAAAATCAATTTAAGCGCACCTCAACTATTCTCACATAACTAAATATCTGTTCCTATAACATTTGGTAGTCAAGAAAACTCGAACGAAATTAATTCATACATAGGTAAGAGAGATTAGAATGTGGAGGGTTGGGACATTTGGTAGTCAAGATGAGAGCTTGACAATAGGCAAAT

mRNA sequence

AATTTTTTCAATCCTCAACTCTCAACTTTTGGATCTTTTTCTCAATCAACCTTTTCTCTCTGAATTCACTGTAGAAATGGCTGATACACAGATGAAATCCATTGCCACTCTGCTTCTGTTGCTGAACTTCTGCATGTATGCAATCATTTTGGGCATTGGTGGATGGGCCATGAACACTGCTATTGATCATGGCTTCATCATTGGTCCTGATTTGCGACTACCGGCACATTTTTCGCCAATTTACTTCCCCATGGGGAATGCAGCCACTGGTTTCTTTGTGACATTTGCTTTGTTGGCTGCTGTCTTTGGAGCTGCCTCAGCAATCTCAGGACTGAACCATATTCGCTCATGGAGCGCTGAAAGCTTGGGTGCTGCATCCTCTGCTGCTGTTTTTGCTTGGACTCTCACCATCCTTGCCATGGGCTTTGCTTGCAAAGAGATTGCACTAGATTTCAGAAACACAAGACTGATAACAATGGAGGCTTTTTTCATTATTCTCTCTGCTACACAACTTGTTTACATTATGGCCATCCATGGTGCTGTGTCCACAAGATGAGAGCTGAATTTGTTTGATTCACTGTCCATTTTTAATTGTATTTGATGTTTTTTTCCTTTGTTTTATCTGACCATCTGCAAACCTTGCAACTTGTAAGGAGCTTAATTTAGGAGATTATTTTTTTGTGATGTGTGTGATGTGATTTCATTTGTACAAGTATTTACAATAAACTTGGTTTGATTGCACTGGATTTCATTTATCTATTTTTGTATATGTATGAGTGCTAAAATCAATTTAAGCGCACCTCAACTATTCTCACATAACTAAATATCTGTTCCTATAACATTTGGTAGTCAAGAAAACTCGAACGAAATTAATTCATACATAGGTAAGAGAGATTAGAATGTGGAGGGTTGGGACATTTGGTAGTCAAGATGAGAGCTTGACAATAGGCAAAT

Coding sequence (CDS)

ATGGCTGATACACAGATGAAATCCATTGCCACTCTGCTTCTGTTGCTGAACTTCTGCATGTATGCAATCATTTTGGGCATTGGTGGATGGGCCATGAACACTGCTATTGATCATGGCTTCATCATTGGTCCTGATTTGCGACTACCGGCACATTTTTCGCCAATTTACTTCCCCATGGGGAATGCAGCCACTGGTTTCTTTGTGACATTTGCTTTGTTGGCTGCTGTCTTTGGAGCTGCCTCAGCAATCTCAGGACTGAACCATATTCGCTCATGGAGCGCTGAAAGCTTGGGTGCTGCATCCTCTGCTGCTGTTTTTGCTTGGACTCTCACCATCCTTGCCATGGGCTTTGCTTGCAAAGAGATTGCACTAGATTTCAGAAACACAAGACTGATAACAATGGAGGCTTTTTTCATTATTCTCTCTGCTACACAACTTGTTTACATTATGGCCATCCATGGTGCTGTGTCCACAAGATGA

Protein sequence

MADTQMKSIATLLLLLNFCMYAIILGIGGWAMNTAIDHGFIIGPDLRLPAHFSPIYFPMGNAATGFFVTFALLAAVFGAASAISGLNHIRSWSAESLGAASSAAVFAWTLTILAMGFACKEIALDFRNTRLITMEAFFIILSATQLVYIMAIHGAVSTR

Homology

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BLAST of Sed0025818 vs. NCBI nr
Match: XP_038895378.1 (membrane protein PM19L-like [Benincasa hispida])

HSP 1 Score: 286.6 bits (732), Expect = 1.3e-73
Identity = 150/159 (94.34%), Postives = 154/159 (96.86%), Query Frame = 0


Query: 1   MADTQMKSIATLLLLLNFCMYAIILGIGGWAMNTAIDHGFIIGPDLRLPAHFSPIYFPMG 60
           MA TQMKS+ATLLLLLNFCMYAIILGIGGWAMN AIDHGFIIGP LRLPAHFSPIYFPMG
Sbjct: 1   MASTQMKSVATLLLLLNFCMYAIILGIGGWAMNHAIDHGFIIGPGLRLPAHFSPIYFPMG 60

Query: 61  NAATGFFVTFALLAAVFGAASAISGLNHIRSWSAESLGAASSAAVFAWTLTILAMGFACK 120
           NAATGFFV FALLAAVFGAASAISGLNHIRSWSAESLGAAS+AAVFAWTLTILAMGFACK
Sbjct: 61  NAATGFFVIFALLAAVFGAASAISGLNHIRSWSAESLGAASTAAVFAWTLTILAMGFACK 120

Query: 121 EIALDFRNTRLITMEAFFIILSATQLVYIMAIHGAVSTR 160
           EIALDFRN RL+TMEAFFIILSATQLVYI+AIHGAVSTR
Sbjct: 121 EIALDFRNARLVTMEAFFIILSATQLVYIIAIHGAVSTR 159

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BLAST of Sed0025818 vs. NCBI nr
Match: XP_008443837.1 (PREDICTED: uncharacterized protein LOC103487332 [Cucumis melo] >ABQ53641.1 AWPM19-like protein [Cucumis melo])

HSP 1 Score: 285.8 bits (730), Expect = 2.3e-73
Identity = 149/159 (93.71%), Postives = 151/159 (94.97%), Query Frame = 0


Query: 1   MADTQMKSIATLLLLLNFCMYAIILGIGGWAMNTAIDHGFIIGPDLRLPAHFSPIYFPMG 60
           MA TQMKSIATLLLLLNFCMY IILGIGGWAMN AIDHGFIIGP LRLPAHFSPIYFPMG
Sbjct: 1   MASTQMKSIATLLLLLNFCMYVIILGIGGWAMNKAIDHGFIIGPGLRLPAHFSPIYFPMG 60

Query: 61  NAATGFFVTFALLAAVFGAASAISGLNHIRSWSAESLGAASSAAVFAWTLTILAMGFACK 120
           NAATGFFVTFALLA VFGAASAISGLNHIRSWS ESLGAASSAAVFAWTLTILAMGFACK
Sbjct: 61  NAATGFFVTFALLAGVFGAASAISGLNHIRSWSVESLGAASSAAVFAWTLTILAMGFACK 120

Query: 121 EIALDFRNTRLITMEAFFIILSATQLVYIMAIHGAVSTR 160
           EIALDFRN RL+TMEAFFIILSATQLVYIMAIHG +STR
Sbjct: 121 EIALDFRNARLVTMEAFFIILSATQLVYIMAIHGVISTR 159

[Close]

BLAST of Sed0025818 vs. NCBI nr
Match: XP_022140126.1 (uncharacterized protein LOC111010860 [Momordica charantia])

HSP 1 Score: 283.9 bits (725), Expect = 8.7e-73
Identity = 147/159 (92.45%), Postives = 153/159 (96.23%), Query Frame = 0


Query: 1   MADTQMKSIATLLLLLNFCMYAIILGIGGWAMNTAIDHGFIIGPDLRLPAHFSPIYFPMG 60
           MA+TQMKSIATLLLLLNFCMYA+ILGIGGWAMNTAIDHGF+IGPD RLPAHFSPIYFPMG
Sbjct: 1   MANTQMKSIATLLLLLNFCMYAVILGIGGWAMNTAIDHGFVIGPDFRLPAHFSPIYFPMG 60

Query: 61  NAATGFFVTFALLAAVFGAASAISGLNHIRSWSAESLGAASSAAVFAWTLTILAMGFACK 120
           NAATGFFVTFALLAAVFGAASAISGLNHIRSWS +SLGAASSAAVFAWTLTILAMGFACK
Sbjct: 61  NAATGFFVTFALLAAVFGAASAISGLNHIRSWSVDSLGAASSAAVFAWTLTILAMGFACK 120

Query: 121 EIALDFRNTRLITMEAFFIILSATQLVYIMAIHGAVSTR 160
           EI LDFR+TRLITMEAFFIILS TQL+YIMAIHGA S R
Sbjct: 121 EIELDFRSTRLITMEAFFIILSVTQLLYIMAIHGAPSIR 159

[Close]

BLAST of Sed0025818 vs. NCBI nr
Match: XP_023001482.1 (uncharacterized protein LOC111495604 [Cucurbita maxima])

HSP 1 Score: 276.2 bits (705), Expect = 1.8e-70
Identity = 143/154 (92.86%), Postives = 150/154 (97.40%), Query Frame = 0


Query: 6   MKSIATLLLLLNFCMYAIILGIGGWAMNTAIDHGFIIGPDLRLPAHFSPIYFPMGNAATG 65
           MK +A+LLLLLNFCMYA+ILGIGGWAMNTAIDHGF+IGP LRLPAHFSPIYFPMGNAATG
Sbjct: 1   MKPLASLLLLLNFCMYAVILGIGGWAMNTAIDHGFVIGPGLRLPAHFSPIYFPMGNAATG 60

Query: 66  FFVTFALLAAVFGAASAISGLNHIRSWSAESLGAASSAAVFAWTLTILAMGFACKEIALD 125
           FFVTFALLAAV GAASAISGLNHIRSWSAESLGAASSAAVFAW+LTILAMGFACKEIALD
Sbjct: 61  FFVTFALLAAVAGAASAISGLNHIRSWSAESLGAASSAAVFAWSLTILAMGFACKEIALD 120

Query: 126 FRNTRLITMEAFFIILSATQLVYIMAIHGAVSTR 160
           +RNTRLITMEAFFIILSATQL+YI AIHGAVSTR
Sbjct: 121 YRNTRLITMEAFFIILSATQLIYIFAIHGAVSTR 154

[Close]

BLAST of Sed0025818 vs. NCBI nr
Match: XP_023519488.1 (membrane protein PM19L-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 273.5 bits (698), Expect = 1.2e-69
Identity = 142/154 (92.21%), Postives = 149/154 (96.75%), Query Frame = 0


Query: 6   MKSIATLLLLLNFCMYAIILGIGGWAMNTAIDHGFIIGPDLRLPAHFSPIYFPMGNAATG 65
           MK IATLLLLLNFCM+A+ILGIGGWAMNTAIDHGF+IGP LRLPAHFSPIYFPMGNAATG
Sbjct: 1   MKPIATLLLLLNFCMFAVILGIGGWAMNTAIDHGFVIGPGLRLPAHFSPIYFPMGNAATG 60

Query: 66  FFVTFALLAAVFGAASAISGLNHIRSWSAESLGAASSAAVFAWTLTILAMGFACKEIALD 125
           FFVTFALLAAV GAAS+ISGLNHIRSWSAESLGAASSAAV AW+LTILAMGFACKEIALD
Sbjct: 61  FFVTFALLAAVAGAASSISGLNHIRSWSAESLGAASSAAVLAWSLTILAMGFACKEIALD 120

Query: 126 FRNTRLITMEAFFIILSATQLVYIMAIHGAVSTR 160
           +RNTRLITMEAFFIILSATQL+YI AIHGAVSTR
Sbjct: 121 YRNTRLITMEAFFIILSATQLIYIFAIHGAVSTR 154

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BLAST of Sed0025818 vs. ExPASy Swiss-Prot
Match: Q6L4D2 (Membrane protein PM19L OS=Oryza sativa subsp. japonica OX=39947 GN=PM19L PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.2e-21
Identity = 63/145 (43.45%), Postives = 90/145 (62.07%), Query Frame = 0


Query: 13  LLLLNFCMYAIILGIGGWAMNTAIDHGFIIGPDLRLPAHFSPIYFPMGNAATGFFVTFAL 72
           LL+LN  MY I++G   W +N  I +G    P +             GN AT +F+ FA+
Sbjct: 12  LLVLNLIMYLIVIGFASWNLNHYI-NGETNHPGV------------AGNGATFYFLVFAI 71

Query: 73  LAAVFGAASAISGLNHIRSWSAESLGAASSAAVFAWTLTILAMGFACKEIAL-DFRNTRL 132
           LA V GAAS ++G++H+RSW A SL A +++A+ AW +T LA G ACKEI +  +R  RL
Sbjct: 72  LAGVVGAASKLAGVHHVRSWGAHSLAAGAASALIAWAITALAFGLACKEIHIGGYRGWRL 131

Query: 133 ITMEAFFIILSATQLVYIMAIHGAV 157
             +EAF IIL+ TQL+Y+  +HG +
Sbjct: 132 RVLEAFVIILAFTQLLYVAMLHGGL 143

[Close]

BLAST of Sed0025818 vs. ExPASy TrEMBL
Match: A5Y734 (AWPM19-like protein OS=Cucumis melo OX=3656 GN=LOC103487332 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 1.1e-73
Identity = 149/159 (93.71%), Postives = 151/159 (94.97%), Query Frame = 0


Query: 1   MADTQMKSIATLLLLLNFCMYAIILGIGGWAMNTAIDHGFIIGPDLRLPAHFSPIYFPMG 60
           MA TQMKSIATLLLLLNFCMY IILGIGGWAMN AIDHGFIIGP LRLPAHFSPIYFPMG
Sbjct: 1   MASTQMKSIATLLLLLNFCMYVIILGIGGWAMNKAIDHGFIIGPGLRLPAHFSPIYFPMG 60

Query: 61  NAATGFFVTFALLAAVFGAASAISGLNHIRSWSAESLGAASSAAVFAWTLTILAMGFACK 120
           NAATGFFVTFALLA VFGAASAISGLNHIRSWS ESLGAASSAAVFAWTLTILAMGFACK
Sbjct: 61  NAATGFFVTFALLAGVFGAASAISGLNHIRSWSVESLGAASSAAVFAWTLTILAMGFACK 120

Query: 121 EIALDFRNTRLITMEAFFIILSATQLVYIMAIHGAVSTR 160
           EIALDFRN RL+TMEAFFIILSATQLVYIMAIHG +STR
Sbjct: 121 EIALDFRNARLVTMEAFFIILSATQLVYIMAIHGVISTR 159

[Close]

BLAST of Sed0025818 vs. ExPASy TrEMBL
Match: A0A6J1CEV9 (uncharacterized protein LOC111010860 OS=Momordica charantia OX=3673 GN=LOC111010860 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 4.2e-73
Identity = 147/159 (92.45%), Postives = 153/159 (96.23%), Query Frame = 0


Query: 1   MADTQMKSIATLLLLLNFCMYAIILGIGGWAMNTAIDHGFIIGPDLRLPAHFSPIYFPMG 60
           MA+TQMKSIATLLLLLNFCMYA+ILGIGGWAMNTAIDHGF+IGPD RLPAHFSPIYFPMG
Sbjct: 1   MANTQMKSIATLLLLLNFCMYAVILGIGGWAMNTAIDHGFVIGPDFRLPAHFSPIYFPMG 60

Query: 61  NAATGFFVTFALLAAVFGAASAISGLNHIRSWSAESLGAASSAAVFAWTLTILAMGFACK 120
           NAATGFFVTFALLAAVFGAASAISGLNHIRSWS +SLGAASSAAVFAWTLTILAMGFACK
Sbjct: 61  NAATGFFVTFALLAAVFGAASAISGLNHIRSWSVDSLGAASSAAVFAWTLTILAMGFACK 120

Query: 121 EIALDFRNTRLITMEAFFIILSATQLVYIMAIHGAVSTR 160
           EI LDFR+TRLITMEAFFIILS TQL+YIMAIHGA S R
Sbjct: 121 EIELDFRSTRLITMEAFFIILSVTQLLYIMAIHGAPSIR 159

[Close]

BLAST of Sed0025818 vs. ExPASy TrEMBL
Match: A0A6J1KGN7 (uncharacterized protein LOC111495604 OS=Cucurbita maxima OX=3661 GN=LOC111495604 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 8.7e-71
Identity = 143/154 (92.86%), Postives = 150/154 (97.40%), Query Frame = 0


Query: 6   MKSIATLLLLLNFCMYAIILGIGGWAMNTAIDHGFIIGPDLRLPAHFSPIYFPMGNAATG 65
           MK +A+LLLLLNFCMYA+ILGIGGWAMNTAIDHGF+IGP LRLPAHFSPIYFPMGNAATG
Sbjct: 1   MKPLASLLLLLNFCMYAVILGIGGWAMNTAIDHGFVIGPGLRLPAHFSPIYFPMGNAATG 60

Query: 66  FFVTFALLAAVFGAASAISGLNHIRSWSAESLGAASSAAVFAWTLTILAMGFACKEIALD 125
           FFVTFALLAAV GAASAISGLNHIRSWSAESLGAASSAAVFAW+LTILAMGFACKEIALD
Sbjct: 61  FFVTFALLAAVAGAASAISGLNHIRSWSAESLGAASSAAVFAWSLTILAMGFACKEIALD 120

Query: 126 FRNTRLITMEAFFIILSATQLVYIMAIHGAVSTR 160
           +RNTRLITMEAFFIILSATQL+YI AIHGAVSTR
Sbjct: 121 YRNTRLITMEAFFIILSATQLIYIFAIHGAVSTR 154

[Close]

BLAST of Sed0025818 vs. ExPASy TrEMBL
Match: A0A0A0LV01 (AWPM19-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G462030 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 2.5e-70
Identity = 145/159 (91.19%), Postives = 147/159 (92.45%), Query Frame = 0


Query: 1   MADTQMKSIATLLLLLNFCMYAIILGIGGWAMNTAIDHGFIIGPDLRLPAHFSPIYFPMG 60
           MA TQMKS ATLLLLLNFCMY IILGIGGWAMN AIDHGFIIGP LRLPAHFSPIYFPMG
Sbjct: 1   MASTQMKSFATLLLLLNFCMYVIILGIGGWAMNKAIDHGFIIGPGLRLPAHFSPIYFPMG 60

Query: 61  NAATGFFVTFALLAAVFGAASAISGLNHIRSWSAESLGAASSAAVFAWTLTILAMGFACK 120
           NAATGFFV FALLA VFGAASAISGLNHIRSWS ESL AASSAAVFAWTLTILAMGFA K
Sbjct: 61  NAATGFFVLFALLAGVFGAASAISGLNHIRSWSVESLSAASSAAVFAWTLTILAMGFAWK 120

Query: 121 EIALDFRNTRLITMEAFFIILSATQLVYIMAIHGAVSTR 160
           EIALDFRN RL+TMEAFFIILSATQLVYIMAIHG +STR
Sbjct: 121 EIALDFRNARLVTMEAFFIILSATQLVYIMAIHGDISTR 159

[Close]

BLAST of Sed0025818 vs. ExPASy TrEMBL
Match: A0A6J1EI31 (uncharacterized protein LOC111434286 OS=Cucurbita moschata OX=3662 GN=LOC111434286 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 6.3e-69
Identity = 141/154 (91.56%), Postives = 147/154 (95.45%), Query Frame = 0


Query: 6   MKSIATLLLLLNFCMYAIILGIGGWAMNTAIDHGFIIGPDLRLPAHFSPIYFPMGNAATG 65
           MK +ATLLLLLNFCMYA+ILGIGGWAMNTAIDHGF+IGP LRLPAHFSPIYFPMGNAATG
Sbjct: 1   MKPLATLLLLLNFCMYAVILGIGGWAMNTAIDHGFVIGPGLRLPAHFSPIYFPMGNAATG 60

Query: 66  FFVTFALLAAVFGAASAISGLNHIRSWSAESLGAASSAAVFAWTLTILAMGFACKEIALD 125
           FFVTFALLAAV GAASAISGLNHIR WSAESLGAASSAAVFAW+LTILAMGFACKEIALD
Sbjct: 61  FFVTFALLAAVAGAASAISGLNHIRLWSAESLGAASSAAVFAWSLTILAMGFACKEIALD 120

Query: 126 FRNTRLITMEAFFIILSATQLVYIMAIHGAVSTR 160
           +RNTRLITMEAFFIILSATQL+YI AIHGAV  R
Sbjct: 121 YRNTRLITMEAFFIILSATQLLYIFAIHGAVFKR 154

[Close]

BLAST of Sed0025818 vs. TAIR 10
Match: AT1G29520.1 (AWPM-19-like family protein )

HSP 1 Score: 218.0 bits (554), Expect = 5.4e-57
Identity = 113/154 (73.38%), Postives = 128/154 (83.12%), Query Frame = 0


Query: 1   MADTQMKSIATLLLLLNFCMYAIILGIGGWAMNTAIDHGFIIGPDLRLPAHFSPIYFPMG 60
           MA  Q+K +A+ LL+LNFCMY I+LGIGGWAMN AIDHGF +GP+L LPAHFSPIYFPMG
Sbjct: 1   MAGEQIKPVASGLLVLNFCMYVIVLGIGGWAMNRAIDHGFEVGPNLELPAHFSPIYFPMG 60

Query: 61  NAATGFFVTFALLAAVFGAASAISGLNHIRSWSAESLGAASSAAVFAWTLTILAMGFACK 120
           NAATGFFV FALLA V GAAS ISGL+HIRSW+  SL AA++AA  AWTLT+LAMGFA K
Sbjct: 61  NAATGFFVIFALLAGVVGAASTISGLSHIRSWTVGSLPAAATAATIAWTLTVLAMGFAWK 120

Query: 121 EIALDFRNTRLITMEAFFIILSATQLVYIMAIHG 155
           EI L  RN +L TMEAF IILS TQL+YI A+HG
Sbjct: 121 EIELQGRNAKLRTMEAFLIILSVTQLIYIAAVHG 154

[Close]

BLAST of Sed0025818 vs. TAIR 10
Match: AT5G46530.1 (AWPM-19-like family protein )

HSP 1 Score: 210.7 bits (535), Expect = 8.7e-55
Identity = 107/154 (69.48%), Postives = 127/154 (82.47%), Query Frame = 0


Query: 1   MADTQMKSIATLLLLLNFCMYAIILGIGGWAMNTAIDHGFIIGPDLRLPAHFSPIYFPMG 60
           M + QMK +A+ LL+LNFCMYAI+LGIG W+MN AI+HGF+IG D  LPAHFSPI+FPMG
Sbjct: 1   MVEHQMKPVASFLLVLNFCMYAIVLGIGAWSMNKAINHGFLIGADYSLPAHFSPIHFPMG 60

Query: 61  NAATGFFVTFALLAAVFGAASAISGLNHIRSWSAESLGAASSAAVFAWTLTILAMGFACK 120
           NAATGFF+ FAL+A V GAAS ISG++H++SW+  SL AA SAA  AW+LT+LAMGF CK
Sbjct: 61  NAATGFFIMFALIAGVAGAASVISGISHLQSWTTTSLPAAVSAATIAWSLTLLAMGFGCK 120

Query: 121 EIALDFRNTRLITMEAFFIILSATQLVYIMAIHG 155
           EI L  RN RL TMEAF IILSATQL+YI AI+G
Sbjct: 121 EIELGMRNARLRTMEAFLIILSATQLLYIAAIYG 154

[Close]

BLAST of Sed0025818 vs. TAIR 10
Match: AT5G18970.1 (AWPM-19-like family protein )

HSP 1 Score: 122.5 bits (306), Expect = 3.1e-28
Identity = 69/156 (44.23%), Postives = 100/156 (64.10%), Query Frame = 0


Query: 1   MADTQMKSIATLLLLLNFCMYAIILGIGGWAMNTAIDHGFIIGPDLRLPAHFSPIYFPMG 60
           MA    KS A +LL+LN  +Y +I  I  WA+N  I+        L LPA   PIYFP+G
Sbjct: 1   MASGGSKSAAFMLLMLNLGLYFVITIIASWAVNHGIERTRESASTLSLPAKIFPIYFPVG 60

Query: 61  NAATGFFVTFALLAAVFGAASAISGLNHIRSWSAESLGAASSAAVFAWTLTILAMGFACK 120
           N ATGFFV F L+A V G A++++G+ ++  W + +L +A+++++ +W+LT+LAMG ACK
Sbjct: 61  NMATGFFVIFTLIAGVVGMATSLTGIINVLQWDSPNLHSAAASSLISWSLTLLAMGLACK 120

Query: 121 EIALDFRNTRLITMEAFFIILSATQLVYIMAIHGAV 157
           EI + +    L T+E   II+SATQL+   AIH  V
Sbjct: 121 EINIGWTEANLRTLEVLTIIVSATQLLCTGAIHAGV 156

[Close]

BLAST of Sed0025818 vs. TAIR 10
Match: AT1G04560.1 (AWPM-19-like family protein )

HSP 1 Score: 113.2 bits (282), Expect = 1.9e-25
Identity = 73/161 (45.34%), Postives = 100/161 (62.11%), Query Frame = 0


Query: 1   MADTQMKSIATLLLLLNFCMYAIILGIGGWAMNTAIDHGFIIGPDLRLPAHFSPIYFPMG 60
           MA T  ++IA  LL LN  MY I+LG   W +N  I +G    P               G
Sbjct: 1   MATTVGRNIAAPLLFLNLVMYLIVLGFASWCLNKYI-NGQTNHPSFG------------G 60

Query: 61  NAATGFFVTFALLAAVFGAASAISGLNHIRSWSAESLGAASSAAVFAWTLTILAMGFACK 120
           N AT FF+TF++LAAV G AS ++G NHIR W  +SL AA ++++ AW +T LAMG ACK
Sbjct: 61  NGATPFFLTFSILAAVVGVASKLAGANHIRFWRNDSLAAAGASSIVAWAITALAMGLACK 120

Query: 121 EIAL-DFRNTRLITMEAFFIILSATQLVYIMAIH-GAVSTR 160
           +I +  +R  RL  +EAF IIL+ TQL+Y+M IH G++S++
Sbjct: 121 QINIGGWRGWRLKMIEAFIIILTFTQLLYLMLIHAGSLSSK 148

The following BLAST results are available for this feature:

BLAST of Sed0025818 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895378.1	1.3e-73	94.34	membrane protein PM19L-like [Benincasa hispida]	[more]
XP_008443837.1	2.3e-73	93.71	PREDICTED: uncharacterized protein LOC103487332 [Cucumis melo] >ABQ53641.1 AWPM1...	[more]
XP_022140126.1	8.7e-73	92.45	uncharacterized protein LOC111010860 [Momordica charantia]	[more]
XP_023001482.1	1.8e-70	92.86	uncharacterized protein LOC111495604 [Cucurbita maxima]	[more]
XP_023519488.1	1.2e-69	92.21	membrane protein PM19L-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0025818 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6L4D2	1.2e-21	43.45	Membrane protein PM19L OS=Oryza sativa subsp. japonica OX=39947 GN=PM19L PE=2 SV...	[more]

BLAST of Sed0025818 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A5Y734	1.1e-73	93.71	AWPM19-like protein OS=Cucumis melo OX=3656 GN=LOC103487332 PE=4 SV=1	[more]
A0A6J1CEV9	4.2e-73	92.45	uncharacterized protein LOC111010860 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A6J1KGN7	8.7e-71	92.86	uncharacterized protein LOC111495604 OS=Cucurbita maxima OX=3661 GN=LOC111495604...	[more]
A0A0A0LV01	2.5e-70	91.19	AWPM19-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G462030 PE=4 SV=1	[more]
A0A6J1EI31	6.3e-69	91.56	uncharacterized protein LOC111434286 OS=Cucurbita moschata OX=3662 GN=LOC1114342...	[more]

BLAST of Sed0025818 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29520.1	5.4e-57	73.38	AWPM-19-like family protein	[more]
AT5G46530.1	8.7e-55	69.48	AWPM-19-like family protein	[more]
AT5G18970.1	3.1e-28	44.23	AWPM-19-like family protein	[more]
AT1G04560.1	1.9e-25	45.34	AWPM-19-like family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008390	AWPM-19-like	PFAM	PF05512	AWPM-19	coord: 15..155 e-value: 3.7E-60 score: 202.2
IPR008390	AWPM-19-like	PANTHER	PTHR33294	AWPM-19-LIKE FAMILY PROTEIN	coord: 1..158
None	No IPR available	PANTHER	PTHR33294:SF6	AWPM-19-LIKE FAMILY PROTEIN	coord: 1..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0025818.1	Sed0025818.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane