Sed0025783 (gene) Chayote v1

Overview


Name	Sed0025783
Type	gene
Organism	Sechium edule (Chayote v1)
Description	RNA-binding protein 24-A
Location	LG11: 17826104 .. 17832750 (+)
RNA-Seq Expression	Sed0025783
Synteny	Sed0025783

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCTCCTCCTCCTCCTCCTCCTCCTCCTTGTCCGTATTTCATTCTTGTGATCGTAATACTTTCCCCTGTACAAACCCACCCTCTTCCTACGATCTCCCTACCCCTATTCCTCCTTGCCCCATTTTATCTCCCTGTCTAATTATGATCATTCTTATTGCCCTCCATCATTCATAAGCCCTTTCAGTTTCCTCCTGATTCTCTCTGTACATCCCCCTTACTTCCTAAGGGGTTTCCCACGCCCTTGCTTTTCTTTCTGGGTTCCTCTCTAATCCTCCTGTTCTCTTCCACTTGATCCAATCTTACTTACCCTCTATCCCTCTCTCTTCATATTGTATCCTGGGTGGGGCTTCAATTCCTTTTCTCTTGCTTTTCTTGCTTTTTTTCTTTTTCATTAGTAATGGCTTACCAGCGTCTTCCGGGTCCTAGTTCCCTATCTGGATCAAGTTCTAGTTCTGGGTTCTTGAACTCTCCCTTTGGTGATACCACTTACACCAAAGTCTTTGTTGGTGGCTTGGCCTGGGAGACTCACAGCGACACCATGAGGCGCTACTTCCAGCAGTTTGGGGACATTCTTGAGGCTGTTGTAATAACAGATAAGAATACAGGCAGATCCAAAGGATATGGTTTCGTCAGTATTAATGCTTCTTACTTTAATGGGTTTTTGTTAACTTTGTACTTCTTTTCTATAGCATGGTATTAGAATTGCTTGATCGCAAATATGTAAATTGTTGACATTTGAATGACCTGAACGTTTCTTTCTGTTTACATGGAGGGATTTAGGTGACTTTCCGGGATCCAGAGTCTGCTAGAAGAGCTTGTGTAGATCCTACTCCAATTATTGATGGCAGGCAAGCGAATTGTAATCTGGCTTCACTTGGCCGGCCTCGGCCACCTATATCTTATGGTATTAATTTCCTTTTCAGTCTTTTATTGTTTAGAGAACTGCATTTGCATTGTTACTTCTGGTCATGGATGTTTGTATGATCGGGATTTTTCCTTGTAAATGTGCATTTTGTACGAGAAAATAACAGTAGCAAATTTCCTGTTCTACACTGTTGTTTCTTACAGGACGCTTAAGACCACCAGCCGTCTATGTTGGAGGCATGCAACCCAACAGGGGAACTTATATTGGAAATTTTGGCTATCAACAACCAGTTTCTTATGCTTATCAGCAGGGACTTGCATATCCTCCTTATGGGTGTGTCCCTGTGGTTTCTTTTAGTGCATCTAAGCCTGCCAATCATTGAAATTATTTTATTTGACTAAGATTTCTGCTATATCACATCCTTTACATCTTGTGACTCTACGGGGCTTGGTTTGCTTTTAAAATTTATGAGATTTTGGTTATTTTTCTTTTCTGTTTGTCATCAAGTCTTATAGTAAATGAAAGATGTTGTCAAGTAATGATTGAAATGTAAATATATATTTTCTGATTTGTATTTCATTTTAAGTTTTATACCCTTGCATGTTCTTCTAATGGATCTTATGTTATGTCCTAAAGTTATTTGTTTCTTAACTCTTAAGATAGTCGAGGTGCATCACTTGGCCGGCATTCATTCTCTAAATGCCCTCTTAATGTTAGTATTTAAAGTCACAAGAGGTATATTACCAATCACAACGTGCATCCTTAGGATATGCATAACAAGGATCAGATATAAAAAATGGCTGAGAAAAGGCAGCCCAATTGATAAAGATATCTTGAATAGAATAGTTAGCAAATGACTATGAAGATGCAGCCCATGTGTAGCCGATCATACGGGCTGATTCCGTTCTGGAAAATCATGGAAGGTGCAAGTCTTGAAAAATACGTTGGTTTCTCTCCCACCACTAATCATAAAGCAGACTATAACAATATTAACCCACAAAAAAGAAAAACTGAGCCTTCTTTCACAGCTTAGGGCCTAGGAGCAGCTAATGAATATTATGGATTGTGAAACTGGAAAATGCCCAAGACATATTAAAAATATCAAACAACCTGTTCCAATAAAGAGCTGAATATTGACACAAAAAGAAAATAGTATTATTGAATCGGAAGAAGAAGCATGGCTATTATTATTGGAGATGTGCCCTTTCTTGTTTTTCCTTGCATTCATGTTTCTAAGAGAACTCAAGTTGGTAGGATATGACCACTATGGTCATGGTCTCATACCAAATATTTGTCTTCTGGTATCACATTTAACTGCGGGTTGTAAAATGACCAGTTAAAGTTTGCATTGTTTCAGTTTGTACTACTATCTAGATTTCTGCTTTCATAATCTTTTTCCTTTGAAACTTTTAACATTTTGGATTTGTTTTCTATGCAGTTATGCTACTTATGGTTCTGAGTATGTCCACCCGCAGGTATCGCTATTGCTCTATTTACTTACATGTACAATTATATGTGCATGGGGTGGAAGTAGGGAAGGGTGATATGAAAGGGCATCCTTTTAAGTTTCTTAAGGTCTTTTTTAGTTCTAGCATAGTATGTTCATTGGTTCTATTTTTCTGTATCTTTTATTCTATGAATAGGGTGGATACAACCCTTTTTTGGGTCAGCAATACCTGCAAATTTATGGGGTGTCTGGGTCAGCGAGTCCTACTATTTATCATTACGGACAATTTGGTCAAACATTCCCTGGTGGTCATGGATATGGAGCAGTACATGGATATGCAATGCCAAGTCCCCAGATCGTGCAGTTTAGTGGTCATAATGTTAATGCATTACCATCTTCTCCAATGCCTACAATTCAGGCACCATATCATTCAGGTAGTTTGCTTGTATGCAGATTACCCTCTGCTGTTATAAATTATAAAAGGCCACTCCATTGATATATGAAATTACAAAAGGACCGGTAGGAGAGAATGATCTTCTTATATCAATGTAGCAATAAAGAATGATCTTCATACCATTGATATATGAAATTACAGAAGGACTCGTTGGAGAGATTACAAAAGGCCACAAAGGAAATAGAAAGGAAGGTAGTATAGCTGTAGTGCTAGAAGAGGGGGCACTATTTACACTTGAAATGACGAATGCTGTCCAAAAAATGATATTATGAAGTTTTCTTTTCTTGGAATAGTTTTCTATTGTGCTCTAGCCAAATATTCCAACAATAGACTCGTATGAAGTTCTCCCACAACAATTTATTTTCCATTGTGAAAGGATGCCCCATGAGTGAGCTAGATAGTGGTTATAGCCAAACTCTTTATTAATCTAGGGATGTTTAGAGAACTCCTCAATCTCCCAACCACTATTGCCTAATCCCTTTAGTCCTTACTAATTGTCTAACTATTACAATATGGGGTTGGTACTTATATAGGCATCAAGCCTAACTATCTTTATTATTTATACTAACTAACTAAGGTAAATTATTAACTCTCTAAGGGATATATGAGTCTTATCATTACTCGACTCCAAAAAATTCACCTAGTCCTCAAGGTGTTTACGAAGGAGGAGACAAAAAAGAATGCCAAAATTGAATACAAAAAGATACAAGTAAATATTTTCCCACGACAAATTTTTTTTTCTGGTGATAGCATTTGACGGCGGCGACGACCAGAGAGCACCAGGAGGTGGTGGAGGGTCGAAGTGGTTCTCTCTCTTTTGAACTTAGAATTCTTCTTCTTGTCCTTCAATTTTGTTTGATGATTCTGTACAAGTAGCTGATCAAGTTATCCTCCAAAATCATCCACCATGTTGCTTAATTTGGAAATGTCTTCCTTTGCTCGATTTAATATGTTTTGACCATTGTTGTGCAAGGCTAATGGCAGTCTTGAGACAGTATGAGCATAAGACTTAATTTAATTTAAAATATCATACCAATCCTATTTGTGTGCTAACAAGTATTGCAAGACAATATACTTTTATAAAAGTATTAACAAAAAAATAACACCTACAATTGAAATGATACCTTTATTATCACTACAAATATCACTAATTGCATTGAGTTATTTTATAAATTTTGTCTTTATTGTTCTTAAAGCAAAATTTTATTATTCAAACCCTTTTTTTTTAAAGTATATTATTCAAACCCTCTTAATTTTAAAGAATAGAGAAATTTAATACTATTCTTCTAATAATTATTCAAGGTGTAGAACTTTTAGCCTCAATTCATTTTCATAGAGGCATAAGCCTCTTTTGTGGGACACGTAAGTTTCTAATGAATAAAAAAAGGGGTCTTGAGGCAAAAATTTAGAACCTTGCCTCAAGGCTTAAGCCTCATTAGCTTTTTAAAGCATTGACTTTGACACTATGCTTGAGGAAAATACTTTTGTTTATCAGGGATTCCAGCACCTGTTGCAGCACAACCACAGTTTGTTGTTCATTCCCCTCAGTTTTTACAAGGTAGCGGTTCTGACCAAACATCTGGGTGAGGAGTTGATCTGGTATGTTAAAAGTTCGCAGTTAAATTATTAAATTTCATTTCCTATCTTTATCGCCAGCAGTCTAAACCACCTGCAATTTAACTACATTCATAGGTATCCATAGATTGCAGGTTTTAGAGCAGCGGAGCTGCTACTTGAGTGGCGGGCTTCTGATCTAGCCTTGCAAACAATTTATCATGTTTTCTAGAGGTAGTCTTTTTCACATGTGGTCAGGATGACGACCATTTGAAAATTTATGGAAAAATCTTTGTGATGATTTCTTTGCTGTCATTTCTTGTTTCATATAGATTGAAGTCATGTCCATTACAGAATTAGTGATATAAACAATAGGAATGAAAACTCACCTATCTTGACACGTGTTTGTGTGTGGGTATAAAAATATGTGCATGTTTTTGTGTGTATGTATATGTGTGTATGTGCTTGTGTCATTGTGTGGATGCATATAAAGATATGTGCATGTGTTCACATGTATGCATAAAGATATATTCTTTTAGAGCATTGGCTAAATGAATTGACTGTTTTGTCTGGATGTTGTAGGACACTATAAATTGCCCTTTGTAGCTGGTTTTGTCCATAAACATGTATAATTATTTCTTTTATCGGTAAATATTGAGAATTCCCATACTTTCGGAACACATTTTTCCCCGCTGTCTTTTTTTCTTCCATCTTATTTTCTCTTCACAAATCTGTTGAAGTTTACAGTTGAAGATGGTAATTTTTATCCAGTTGGCCTTATGAGTTCTTATGGAATATCTTTCAGCATGACCTGCTACTCTCTGTTGATTATAGACTTTTCTGTTCTCTTTTTCTTATTGCCGGTTTCACAATTTCTTGTTGGACTGATGCGTATGTCTGAAATTTCCAATTGTATGCAATATATTTAGTTATAGATATTGGATCAAAAAGAAAAAGTGATATTTTTACTCTTATGGAAAATCTGGAAGGGCTGGTAGAACGATGTTTTTGCCATGTAAACTCTATACTGTATAATGTGAGCTCAAATGTTGAAATTTATTTTCTGGAAGTTGAATATTTGATTGACTTGTAGACTTCAATAAATATTACTTCCTATTGTTTTGCAGTTGGTTTTGAAGTTATCTTACTTAACTGCAGGTTATAGTCATGCTCACCAGATTCGCAAGATTGTCTTGAATCAGCTCCAGATGGTGGAGAAGAAATATGGAAGATGCTCACTACTCTTCCTCTTAAGACCTTGCTTCTTCCGATGTTTATAAACTTTTATACTCTACCGACGTTCAAGAGCGGTAGGTAGTCATGGATTGATTGATGGGTGCTTAAATCGGTTTTAATCATCTATCTAAGAGAAAGAACGTCAGTTGAAAATTAGAATCAACATATGATTCTTTTATAGTTAACTCCCAGCATTTGGGTGTATAGGAAGTCTGTGGTGCTTTATGTGGTCGTGAGTCTATCGCTTGATCTTGGTACTAAACTAATATATGATGTCATAAGTTTATGTGCATATTAGTTGTAATCTGGAACTTACATAATTTGGGTTTCTTTTGAGGCCTGACTTCATAACAAAGAAACAGCTTCATGTTCTATCAGGAAGATCGAATTACTGATTTTTCATTTTGATATCCTCTAGATAGTGTGTCCGATTTGGATTGGCTAAGTTGGACGTTGTAAAGTTTTTAGTTTCTTAGTGTTTGGATGATGGATAGGTTTTGAAAACATTCTGTTTTTGTTCATAGTGTTTGTTGTGGGAACATTATTTTTTTCTATTTTCTTTCTCTTCTCCCCTTCATTATTACTATCTTCTATTGTTTTCTTCTCATTGGGGGGGAGAGGTTGTCAATGGAGATTCTATACATTGATGGAAGCGTTAGGGGATTTATCAAACCATTATTTTGAGTGATAGGATGCCATGAAAGAAAGAATCATAAATTTGACTTTCTTGGTTCCAAGTTTTGGGATGATGAGAGATGGAAAAGAAAGATTCATTTCTCTTGGCTTTTCCTTGGAGGTGATGAGTTTTTGCAGCTGACTCAGTTGGGGTCTATTTGACTCTGAATTGATTTCTAGCCTCACATACAAGCTTAGGATTTTGTATGAATTTCAAACAAACATTAGATTCATTGTTATGTGGCAGGGAAAGCATCCTAAAGTGACTGTTCTGAAGTGCGGGAAGAAGATTTTGGATGCTTAGAAATTGCTTCTTTTACCCAATGAAAAAGTCACTACCCTTTCGCTTCTTACTGAGTTTTTGTTTTGTCTTTTTTTTTTTGTTGCAAATACGGACTTCGAGTGTTATACATGGC

mRNA sequence

TCCTCCTCCTCCTCCTCCTCCTCCTCCTTGTCCGTATTTCATTCTTGTGATCGTAATACTTTCCCCTGTACAAACCCACCCTCTTCCTACGATCTCCCTACCCCTATTCCTCCTTGCCCCATTTTATCTCCCTGTCTAATTATGATCATTCTTATTGCCCTCCATCATTCATAAGCCCTTTCAGTTTCCTCCTGATTCTCTCTGTACATCCCCCTTACTTCCTAAGGGGTTTCCCACGCCCTTGCTTTTCTTTCTGGGTTCCTCTCTAATCCTCCTGTTCTCTTCCACTTGATCCAATCTTACTTACCCTCTATCCCTCTCTCTTCATATTGTATCCTGGGTGGGGCTTCAATTCCTTTTCTCTTGCTTTTCTTGCTTTTTTTCTTTTTCATTAGTAATGGCTTACCAGCGTCTTCCGGGTCCTAGTTCCCTATCTGGATCAAGTTCTAGTTCTGGGTTCTTGAACTCTCCCTTTGGTGATACCACTTACACCAAAGTCTTTGTTGGTGGCTTGGCCTGGGAGACTCACAGCGACACCATGAGGCGCTACTTCCAGCAGTTTGGGGACATTCTTGAGGCTGTTGTAATAACAGATAAGAATACAGGCAGATCCAAAGGATATGGTTTCGTGACTTTCCGGGATCCAGAGTCTGCTAGAAGAGCTTGTGTAGATCCTACTCCAATTATTGATGGCAGGCAAGCGAATTGTAATCTGGCTTCACTTGGCCGGCCTCGGCCACCTATATCTTATGGACGCTTAAGACCACCAGCCGTCTATGTTGGAGGCATGCAACCCAACAGGGGAACTTATATTGGAAATTTTGGCTATCAACAACCAGTTTCTTATGCTTATCAGCAGGGACTTGCATATCCTCCTTATGGTTATGCTACTTATGGTTCTGAGTATGTCCACCCGCAGGGTGGATACAACCCTTTTTTGGGTCAGCAATACCTGCAAATTTATGGGGTGTCTGGGTCAGCGAGTCCTACTATTTATCATTACGGACAATTTGGTCAAACATTCCCTGGTGGTCATGGATATGGAGCAGTACATGGATATGCAATGCCAAGTCCCCAGATCGTGCAGTTTAGTGGTCATAATGTTAATGCATTACCATCTTCTCCAATGCCTACAATTCAGGCACCATATCATTCAGGGATTCCAGCACCTGTTGCAGCACAACCACAGTTTGTTGTTCATTCCCCTCAGTTTTTACAAGGTAGCGGTTCTGACCAAACATCTGGGTGAGGAGTTGATCTGGTATCCATAGATTGCAGGTTTTAGAGCAGCGGAGCTGCTACTTGAGTGGCGGGCTTCTGATCTAGCCTTGCAAACAATTTATCATGTTTTCTAGAGGTTATAGTCATGCTCACCAGATTCGCAAGATTGTCTTGAATCAGCTCCAGATGGTGGAGAAGAAATATGGAAGATGCTCACTACTCTTCCTCTTAAGACCTTGCTTCTTCCGATGTTTATAAACTTTTATACTCTACCGACGTTCAAGAGCGGTAGGTAGTCATGGATTGATTGATGGGTGCTTAAATCGGTTTTAATCATCTATCTAAGAGAAAGAACGTCAGTTGAAAATTAGAATCAACATATGATTCTTTTATAGTTAACTCCCAGCATTTGGGTGTATAGGAAGTCTGTGGTGCTTTATGTGGTCGTGAGTCTATCGCTTGATCTTGGTACTAAACTAATATATGATGTCATAAGTTTATGTGCATATTAGTTGTAATCTGGAACTTACATAATTTGGGTTTCTTTTGAGGCCTGACTTCATAACAAAGAAACAGCTTCATGTTCTATCAGGAAGATCGAATTACTGATTTTTCATTTTGATATCCTCTAGATAGTGTGTCCGATTTGGATTGGCTAAGTTGGACGTTGTAAAGTTTTTAGTTTCTTAGTGTTTGGATGATGGATAGGTTTTGAAAACATTCTGTTTTTGTTCATAGTGTTTGTTGTGGGAACATTATTTTTTTCTATTTTCTTTCTCTTCTCCCCTTCATTATTACTATCTTCTATTGTTTTCTTCTCATTGGGGGGGAGAGGTTGTCAATGGAGATTCTATACATTGATGGAAGCGTTAGGGGATTTATCAAACCATTATTTTGAGTGATAGGATGCCATGAAAGAAAGAATCATAAATTTGACTTTCTTGGTTCCAAGTTTTGGGATGATGAGAGATGGAAAAGAAAGATTCATTTCTCTTGGCTTTTCCTTGGAGGTGATGAGTTTTTGCAGCTGACTCAGTTGGGGTCTATTTGACTCTGAATTGATTTCTAGCCTCACATACAAGCTTAGGATTTTGTATGAATTTCAAACAAACATTAGATTCATTGTTATGTGGCAGGGAAAGCATCCTAAAGTGACTGTTCTGAAGTGCGGGAAGAAGATTTTGGATGCTTAGAAATTGCTTCTTTTACCCAATGAAAAAGTCACTACCCTTTCGCTTCTTACTGAGTTTTTGTTTTGTCTTTTTTTTTTTGTTGCAAATACGGACTTCGAGTGTTATACATGGC

Coding sequence (CDS)

ATGGCTTACCAGCGTCTTCCGGGTCCTAGTTCCCTATCTGGATCAAGTTCTAGTTCTGGGTTCTTGAACTCTCCCTTTGGTGATACCACTTACACCAAAGTCTTTGTTGGTGGCTTGGCCTGGGAGACTCACAGCGACACCATGAGGCGCTACTTCCAGCAGTTTGGGGACATTCTTGAGGCTGTTGTAATAACAGATAAGAATACAGGCAGATCCAAAGGATATGGTTTCGTGACTTTCCGGGATCCAGAGTCTGCTAGAAGAGCTTGTGTAGATCCTACTCCAATTATTGATGGCAGGCAAGCGAATTGTAATCTGGCTTCACTTGGCCGGCCTCGGCCACCTATATCTTATGGACGCTTAAGACCACCAGCCGTCTATGTTGGAGGCATGCAACCCAACAGGGGAACTTATATTGGAAATTTTGGCTATCAACAACCAGTTTCTTATGCTTATCAGCAGGGACTTGCATATCCTCCTTATGGTTATGCTACTTATGGTTCTGAGTATGTCCACCCGCAGGGTGGATACAACCCTTTTTTGGGTCAGCAATACCTGCAAATTTATGGGGTGTCTGGGTCAGCGAGTCCTACTATTTATCATTACGGACAATTTGGTCAAACATTCCCTGGTGGTCATGGATATGGAGCAGTACATGGATATGCAATGCCAAGTCCCCAGATCGTGCAGTTTAGTGGTCATAATGTTAATGCATTACCATCTTCTCCAATGCCTACAATTCAGGCACCATATCATTCAGGGATTCCAGCACCTGTTGCAGCACAACCACAGTTTGTTGTTCATTCCCCTCAGTTTTTACAAGGTAGCGGTTCTGACCAAACATCTGGGTGA

Protein sequence

MAYQRLPGPSSLSGSSSSSGFLNSPFGDTTYTKVFVGGLAWETHSDTMRRYFQQFGDILEAVVITDKNTGRSKGYGFVTFRDPESARRACVDPTPIIDGRQANCNLASLGRPRPPISYGRLRPPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGSEYVHPQGGYNPFLGQQYLQIYGVSGSASPTIYHYGQFGQTFPGGHGYGAVHGYAMPSPQIVQFSGHNVNALPSSPMPTIQAPYHSGIPAPVAAQPQFVVHSPQFLQGSGSDQTSG

Homology

[Close]

BLAST of Sed0025783 vs. NCBI nr
Match: XP_004146763.1 (RNA-binding protein 24-A [Cucumis sativus] >KGN48031.2 hypothetical protein Csa_003949 [Cucumis sativus])

HSP 1 Score: 530.4 bits (1365), Expect = 9.4e-147
Identity = 261/286 (91.26%), Postives = 271/286 (94.76%), Query Frame = 0


Query: 1   MAYQRLPGPSSLSGSSSSSGFLNSPFGDTTYTKVFVGGLAWETHSDTMRRYFQQFGDILE 60
           MAYQ  PGPSS+SGSSSSSGFLNSPFGDTTYTKVFVGGLAWET S+TMRRYF+QFG+ILE
Sbjct: 1   MAYQHGPGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE 60

Query: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACVDPTPIIDGRQANCNLASLGRPRPPISY-- 120
           AVVITDKNTGRSKGYGFVTFRDPESARRAC DPTPIIDGR+ANCNLASLGRPRPP+SY  
Sbjct: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPLSYGT 120

Query: 121 GRLRPPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGSEYVHPQGGYN 180
           GRLR PAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYG EYV+PQGGYN
Sbjct: 121 GRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYN 180

Query: 181 PFLGQQYLQIYGVSGSASPTIYHYGQFGQTFPGGHGYGAVHGYAMPSPQIVQFSGHNVNA 240
           PF+GQQYLQIYGV GSASPTIYHYGQ GQT PGGHGYGAVHGYAMPSPQI+QFSG NVNA
Sbjct: 181 PFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQILQFSGPNVNA 240

Query: 241 LPSSPMPTIQAPYHSGIPAPVAAQPQFVVHSP-QFLQGSGSDQTSG 284
           L SSPMPTIQAPY SGIPAPVAAQPQFVVHSP QF+QGSGSDQTSG
Sbjct: 241 LTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG 286

[Close]

BLAST of Sed0025783 vs. NCBI nr
Match: XP_008464801.1 (PREDICTED: RNA-binding protein 24-A [Cucumis melo])

HSP 1 Score: 529.6 bits (1363), Expect = 1.6e-146
Identity = 261/286 (91.26%), Postives = 271/286 (94.76%), Query Frame = 0


Query: 1   MAYQRLPGPSSLSGSSSSSGFLNSPFGDTTYTKVFVGGLAWETHSDTMRRYFQQFGDILE 60
           MAYQ  PGPSS+SGSSSSSGFLNSPFGDTTYTKVFVGGLAWET S+TMRRYF+QFG+ILE
Sbjct: 1   MAYQHGPGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE 60

Query: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACVDPTPIIDGRQANCNLASLGRPRPPISY-- 120
           AVVITDKNTGRSKGYGFVTFRDPESARRAC DPTPIIDGR+ANCNLASLGRPRPPIS+  
Sbjct: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPISFGT 120

Query: 121 GRLRPPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGSEYVHPQGGYN 180
           GRLR PAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYG EYV+PQGGYN
Sbjct: 121 GRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYN 180

Query: 181 PFLGQQYLQIYGVSGSASPTIYHYGQFGQTFPGGHGYGAVHGYAMPSPQIVQFSGHNVNA 240
           PF+GQQYLQIYGV GSASPTIYHYGQ GQT PGGHGYGAVHGYAMPSPQI+QFSG NVNA
Sbjct: 181 PFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQILQFSGPNVNA 240

Query: 241 LPSSPMPTIQAPYHSGIPAPVAAQPQFVVHSP-QFLQGSGSDQTSG 284
           L SSPMPTIQAPY SGIPAPVAAQPQFVVHSP QF+QGSGSDQTSG
Sbjct: 241 LTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG 286

[Close]

BLAST of Sed0025783 vs. NCBI nr
Match: KAA0045404.1 (RNA-binding protein 24-A [Cucumis melo var. makuwa] >TYK11333.1 RNA-binding protein 24-A [Cucumis melo var. makuwa])

HSP 1 Score: 529.6 bits (1363), Expect = 1.6e-146
Identity = 261/286 (91.26%), Postives = 271/286 (94.76%), Query Frame = 0


Query: 1   MAYQRLPGPSSLSGSSSSSGFLNSPFGDTTYTKVFVGGLAWETHSDTMRRYFQQFGDILE 60
           MAYQ  PGPSS+SGSSSSSGFLNSPFGDTTYTKVFVGGLAWET S+TMRRYF+QFG+ILE
Sbjct: 1   MAYQHGPGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE 60

Query: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACVDPTPIIDGRQANCNLASLGRPRPPISY-- 120
           AVVITDKNTGRSKGYGFVTFRDPESARRAC DPTPIIDGR+ANCNLASLGRPRPPIS+  
Sbjct: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPISFGT 120

Query: 121 GRLRPPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGSEYVHPQGGYN 180
           GRLR PAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYG EYV+PQGGYN
Sbjct: 121 GRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYN 180

Query: 181 PFLGQQYLQIYGVSGSASPTIYHYGQFGQTFPGGHGYGAVHGYAMPSPQIVQFSGHNVNA 240
           PF+GQQYLQIYGV GSASPTIYHYGQ GQT PGGHGYGAVHGYAMPSPQI+QFSG NVNA
Sbjct: 181 PFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQILQFSGPNVNA 240

Query: 241 LPSSPMPTIQAPYHSGIPAPVAAQPQFVVHSP-QFLQGSGSDQTSG 284
           L SSPMPTIQAPY SGIPAPVAAQPQFVVHSP QF+QGSGSDQTSG
Sbjct: 241 LTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG 286

[Close]

BLAST of Sed0025783 vs. NCBI nr
Match: XP_022946505.1 (RNA-binding protein 24-A [Cucurbita moschata] >XP_022946506.1 RNA-binding protein 24-A [Cucurbita moschata])

HSP 1 Score: 528.5 bits (1360), Expect = 3.6e-146
Identity = 258/284 (90.85%), Postives = 267/284 (94.01%), Query Frame = 0


Query: 1   MAYQRLPGPSSLSGSSSSSGFLNSPFGDTTYTKVFVGGLAWETHSDTMRRYFQQFGDILE 60
           MAYQ   GPSS+SGSSSSSGFLNSPFGDTTYTKVFVGGLAWET S+TMRRYF+QFG+ILE
Sbjct: 1   MAYQHGRGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE 60

Query: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACVDPTPIIDGRQANCNLASLGRPRPPISYGR 120
           AVVITDKNTGRSKGYGFVTFRDPESARRACVDPTPIIDGR+ANCNLASLGRPRPPISYGR
Sbjct: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACVDPTPIIDGRRANCNLASLGRPRPPISYGR 120

Query: 121 LRPPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGSEYVHPQGGYNPF 180
           LRPPAVYVGGMQPNRG YIGNFGYQQPVSYAYQQGLAYPPYGYATYG EYV+PQGGYNPF
Sbjct: 121 LRPPAVYVGGMQPNRGNYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPF 180

Query: 181 LGQQYLQIYGVSGSASPTIYHYGQFGQTFPGGHGYGAVHGYAMPSPQIVQFSGHNVNALP 240
           +GQQYLQIYGV GSASP IYHYGQ GQT PGGHGYGAVHGYAMPSPQIVQF G NVN L 
Sbjct: 181 VGQQYLQIYGVPGSASPAIYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFGGPNVNPLT 240

Query: 241 SSPMPTIQAPYHSGIPAPVAAQPQFVVHSP-QFLQGSGSDQTSG 284
           SSPMPTIQAPY SGIPAPVAAQPQF+VHSP QF+QGS SDQTSG
Sbjct: 241 SSPMPTIQAPYPSGIPAPVAAQPQFIVHSPSQFVQGSSSDQTSG 284

[Close]

BLAST of Sed0025783 vs. NCBI nr
Match: KAG6599081.1 (putative RNA-binding protein ARP1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 528.5 bits (1360), Expect = 3.6e-146
Identity = 258/284 (90.85%), Postives = 267/284 (94.01%), Query Frame = 0


Query: 1   MAYQRLPGPSSLSGSSSSSGFLNSPFGDTTYTKVFVGGLAWETHSDTMRRYFQQFGDILE 60
           MAYQ   GPSS+SGSSSSSGFLNSPFGDTTYTKVFVGGLAWET S+TMRRYF+QFG+ILE
Sbjct: 1   MAYQHGRGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE 60

Query: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACVDPTPIIDGRQANCNLASLGRPRPPISYGR 120
           AVVITDKNTGRSKGYGFVTFRDPESARRACVDPTPIIDGR+ANCNLASLGRPRPPISYGR
Sbjct: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACVDPTPIIDGRRANCNLASLGRPRPPISYGR 120

Query: 121 LRPPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGSEYVHPQGGYNPF 180
           LRPPAVYVGGMQPNRG YIGNFGYQQPVSYAYQQGLAYPPYGYATYG EYV+PQGGYNPF
Sbjct: 121 LRPPAVYVGGMQPNRGNYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPF 180

Query: 181 LGQQYLQIYGVSGSASPTIYHYGQFGQTFPGGHGYGAVHGYAMPSPQIVQFSGHNVNALP 240
           +GQQYLQIYGV GSASP IYHYGQ GQT PGGHGYGAVHGYAMPSPQIVQF G NVN L 
Sbjct: 181 VGQQYLQIYGVPGSASPAIYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFGGPNVNPLT 240

Query: 241 SSPMPTIQAPYHSGIPAPVAAQPQFVVHSP-QFLQGSGSDQTSG 284
           SSPMPTIQAPY SGIPAPVAAQPQF+VHSP QF+QGS SDQTSG
Sbjct: 241 SSPMPTIQAPYPSGIPAPVAAQPQFIVHSPSQFVQGSSSDQTSG 284

[Close]

BLAST of Sed0025783 vs. ExPASy Swiss-Prot
Match: Q9M1S3 (Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana OX=3702 GN=ARP1 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.1e-31
Identity = 107/268 (39.93%), Postives = 135/268 (50.37%), Query Frame = 0


Query: 17  SSSGFLNSPFGDTTYTKVFVGGLAWETHSDTMRRYFQQFGDILEAVVITDKNTGRSKGYG 76
           ++S  +N  FGDT  TKVFVGGLAW+TH + M  +F ++GDILEAV+I+DK T RSKGYG
Sbjct: 2   TTSNNVNGCFGDTKLTKVFVGGLAWDTHKEAMYDHFIKYGDILEAVIISDKLTRRSKGYG 61

Query: 77  FVTFRDPESARRACVDPTPIIDGRQANCNLASLGRPRPPISYGRLRPPAVYV----GGMQ 136
           FVTF+D ++A RAC D TPII+GR+ANCNLASLG        GRLR          G   
Sbjct: 62  FVTFKDAKAATRACEDSTPIINGRRANCNLASLG--------GRLRKSPTMTSPQQGPKN 121

Query: 137 PNRGT--YIGNFG-YQQPVSYAYQQ-----GLAYPPYGYATYGSEYVHPQGGYNPFLGQQ 196
            NR T  ++GN   +  P  +  QQ       A P YGY    S YV P   +N  +G  
Sbjct: 122 GNRATPPHVGNHSQWYYPSGFTNQQHQQQNHQAVPFYGYP---SAYVAPNMTFNQKVGY- 181

Query: 197 YLQIYGVSGSASPTIYHYGQFGQTFPGGHGYGAVHGYAMPSPQIV---QFSGHNVNALPS 256
                 V G+     Y  G + Q  P           + P PQ      + G  V    +
Sbjct: 182 ------VGGT-----YMNGYYAQMQP--------QPQSQPQPQYYHHHMYGGGRVMVGAA 238

Query: 257 SPMPTIQA--PYHS----GIPAPVAAQP 264
           SPM       PYH     G P P  ++P
Sbjct: 242 SPMVPFYTVYPYHQSQAIGFPQPSFSKP 238

[Close]

BLAST of Sed0025783 vs. ExPASy Swiss-Prot
Match: Q6GQD3 (RNA-binding protein 24-A OS=Xenopus laevis OX=8355 GN=rbm24-a PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 7.0e-28
Identity = 81/201 (40.30%), Postives = 101/201 (50.25%), Query Frame = 0


Query: 28  DTTYTKVFVGGLAWETHSDTMRRYFQQFGDILEAVVITDKNTGRSKGYGFVTFRDPESAR 87
           DTTYTK+FVGGL + T   ++R+YF+ FGDI EAVVITD+ TG+S+GYGFVT  D  +A 
Sbjct: 7   DTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query: 88  RACVDPTPIIDGRQANCNLASLGRPRPPISYGRLRPPAVYVGGMQPNRGTYIGNFGYQQP 147
           RAC DP PIIDGR+AN NLA LG      +  R+  P    G  Q +       FG   P
Sbjct: 67  RACKDPNPIIDGRKANVNLAYLG------AKPRIMQPGFAFGVQQIHPALIQRPFGI--P 126

Query: 148 VSYAYQQGLAYPPYGYATYGSEYVHPQGGYNPFLGQQYLQIYGVSGSASPTIYHYGQFGQ 207
             Y Y Q    P                 Y  +    Y Q    + +A+   Y Y     
Sbjct: 127 AHYVYPQAYVQPGVVIPHVQPTAATSTSPYIDYTSAAYAQYSAAAAAAAYDQYPYA---- 186

Query: 208 TFPGGHGY--GAVHGYAMPSP 227
             P   GY   A +GYA+P P
Sbjct: 187 ASPAATGYVTAAGYGYAVPQP 195

[Close]

BLAST of Sed0025783 vs. ExPASy Swiss-Prot
Match: D3Z4I3 (RNA-binding protein 24 OS=Mus musculus OX=10090 GN=Rbm24 PE=1 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.2e-27
Identity = 82/200 (41.00%), Postives = 104/200 (52.00%), Query Frame = 0


Query: 28  DTTYTKVFVGGLAWETHSDTMRRYFQQFGDILEAVVITDKNTGRSKGYGFVTFRDPESAR 87
           DTTYTK+FVGGL + T   ++R+YF+ FGDI EAVVITD+ TG+S+GYGFVT  D  +A 
Sbjct: 7   DTTYTKIFVGGLPYHTTDASLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query: 88  RACVDPTPIIDGRQANCNLASLGRPRPPISYGRLRPPAVYVGGMQPNRGTYIGNFGYQQP 147
           RAC DP PIIDGR+AN NLA LG      +  R+  P    G  Q +       FG   P
Sbjct: 67  RACKDPNPIIDGRKANVNLAYLG------AKPRIMQPGFAFGVQQLHPALIQRPFGI--P 126

Query: 148 VSYAYQQGLAYP----PYGYATYGSEYVHPQGGYNPFLGQQYLQIYGVSGSASPTIYHYG 207
             Y Y Q    P    P+   T  +    P   Y  + G  Y Q Y  + +A+     Y 
Sbjct: 127 AHYVYPQAFVQPGVVIPHVQPTAAAASTTP---YIDYTGAAYAQ-YSAAAAAAAAAAAYD 186

Query: 208 QFG-QTFPGGHGYGAVHGYA 223
           Q+     P   GY    GY+
Sbjct: 187 QYPYAASPAAAGYVTTGGYS 194

[Close]

BLAST of Sed0025783 vs. ExPASy Swiss-Prot
Match: Q9I8B3 (RNA-binding protein 24-B OS=Xenopus laevis OX=8355 GN=rbm24-b PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.6e-27
Identity = 84/203 (41.38%), Postives = 107/203 (52.71%), Query Frame = 0


Query: 28  DTTYTKVFVGGLAWETHSDTMRRYFQQFGDILEAVVITDKNTGRSKGYGFVTFRDPESAR 87
           DTTYTK+FVGGL + T   ++R+YF+ FGDI EAVVITD+ TG+S+GYGFVT  D  +A 
Sbjct: 7   DTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query: 88  RACVDPTPIIDGRQANCNLASLGRPRPPISYGRLRPPAVYVGGMQPNRGTYIGNFG---- 147
           RAC DP PIIDGR+AN NLA LG      +  R+  P    G  Q +       +G    
Sbjct: 67  RACKDPNPIIDGRKANVNLAYLG------AKPRIMQPGFAFGVQQIHPALVQRPYGIPAH 126

Query: 148 YQQPVSYAYQQGLAYPPYGYATYGSEYVHPQGGYNPFLGQQYLQIYGVSGSASPTIYHYG 207
           Y  P +Y  QQGL  P        S        Y  +    Y Q Y  + +A+   Y Y 
Sbjct: 127 YVYPQAYV-QQGLVIPHVQQTAAAS-----TSPYIDYTSAAYAQ-YAAAAAAAYDQYPYA 186

Query: 208 QFGQTFPGGHGYGAVHGYAMPSP 227
               T   G+   A +GYA+P P
Sbjct: 187 ASPAT--TGYVTAAGYGYAVPQP 194

[Close]

BLAST of Sed0025783 vs. ExPASy Swiss-Prot
Match: Q76LC6 (RNA-binding protein 24 OS=Danio rerio OX=7955 GN=rbm24 PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 3.5e-27
Identity = 84/209 (40.19%), Postives = 110/209 (52.63%), Query Frame = 0


Query: 28  DTTYTKVFVGGLAWETHSDTMRRYFQQFGDILEAVVITDKNTGRSKGYGFVTFRDPESAR 87
           DTTYTK+FVGGL + T   ++R+YF+ FG+I EAVVITD+ TG+S+GYGFVT  D  +A 
Sbjct: 7   DTTYTKIFVGGLPYHTTDSSLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRSAAD 66

Query: 88  RACVDPTPIIDGRQANCNLASLG-RPR---PPISYGRLRPPAVYVGGMQPNRGTYIGNFG 147
           RAC DP PIIDGR+AN NLA LG +PR   P  ++G    P ++   +Q   G       
Sbjct: 67  RACKDPNPIIDGRKANVNLAYLGAKPRVMQPGFTFG---VPQIHPAFIQRPYGI------ 126

Query: 148 YQQPVSYAYQQGLAYP----PYGYATYGSEYVHPQGGYNPFLGQQYLQIYGVSGSASPTI 207
              P  Y Y Q    P    P+   T  S        Y  + G  Y Q    + +A+   
Sbjct: 127 ---PTHYVYPQAFMQPSVVIPHIQPTATS--ATASSPYIDYTGAAYAQYASAATAAAAAA 186

Query: 208 YHYGQFGQTFPGGHGY--GAVHGYAMPSP 227
           Y    +  + P   GY   A +GYAM  P
Sbjct: 187 YEQYPYAAS-PAATGYVAAAGYGYAMQQP 200

[Close]

BLAST of Sed0025783 vs. ExPASy TrEMBL
Match: A0A5D3CHF9 (RNA-binding protein 24-A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold807G00070 PE=4 SV=1)

HSP 1 Score: 529.6 bits (1363), Expect = 7.8e-147
Identity = 261/286 (91.26%), Postives = 271/286 (94.76%), Query Frame = 0


Query: 1   MAYQRLPGPSSLSGSSSSSGFLNSPFGDTTYTKVFVGGLAWETHSDTMRRYFQQFGDILE 60
           MAYQ  PGPSS+SGSSSSSGFLNSPFGDTTYTKVFVGGLAWET S+TMRRYF+QFG+ILE
Sbjct: 1   MAYQHGPGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE 60

Query: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACVDPTPIIDGRQANCNLASLGRPRPPISY-- 120
           AVVITDKNTGRSKGYGFVTFRDPESARRAC DPTPIIDGR+ANCNLASLGRPRPPIS+  
Sbjct: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPISFGT 120

Query: 121 GRLRPPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGSEYVHPQGGYN 180
           GRLR PAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYG EYV+PQGGYN
Sbjct: 121 GRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYN 180

Query: 181 PFLGQQYLQIYGVSGSASPTIYHYGQFGQTFPGGHGYGAVHGYAMPSPQIVQFSGHNVNA 240
           PF+GQQYLQIYGV GSASPTIYHYGQ GQT PGGHGYGAVHGYAMPSPQI+QFSG NVNA
Sbjct: 181 PFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQILQFSGPNVNA 240

Query: 241 LPSSPMPTIQAPYHSGIPAPVAAQPQFVVHSP-QFLQGSGSDQTSG 284
           L SSPMPTIQAPY SGIPAPVAAQPQFVVHSP QF+QGSGSDQTSG
Sbjct: 241 LTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG 286

[Close]

BLAST of Sed0025783 vs. ExPASy TrEMBL
Match: A0A1S3CME8 (RNA-binding protein 24-A OS=Cucumis melo OX=3656 GN=LOC103502602 PE=4 SV=1)

HSP 1 Score: 529.6 bits (1363), Expect = 7.8e-147
Identity = 261/286 (91.26%), Postives = 271/286 (94.76%), Query Frame = 0


Query: 1   MAYQRLPGPSSLSGSSSSSGFLNSPFGDTTYTKVFVGGLAWETHSDTMRRYFQQFGDILE 60
           MAYQ  PGPSS+SGSSSSSGFLNSPFGDTTYTKVFVGGLAWET S+TMRRYF+QFG+ILE
Sbjct: 1   MAYQHGPGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE 60

Query: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACVDPTPIIDGRQANCNLASLGRPRPPISY-- 120
           AVVITDKNTGRSKGYGFVTFRDPESARRAC DPTPIIDGR+ANCNLASLGRPRPPIS+  
Sbjct: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPISFGT 120

Query: 121 GRLRPPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGSEYVHPQGGYN 180
           GRLR PAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYG EYV+PQGGYN
Sbjct: 121 GRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYN 180

Query: 181 PFLGQQYLQIYGVSGSASPTIYHYGQFGQTFPGGHGYGAVHGYAMPSPQIVQFSGHNVNA 240
           PF+GQQYLQIYGV GSASPTIYHYGQ GQT PGGHGYGAVHGYAMPSPQI+QFSG NVNA
Sbjct: 181 PFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQILQFSGPNVNA 240

Query: 241 LPSSPMPTIQAPYHSGIPAPVAAQPQFVVHSP-QFLQGSGSDQTSG 284
           L SSPMPTIQAPY SGIPAPVAAQPQFVVHSP QF+QGSGSDQTSG
Sbjct: 241 LTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG 286

[Close]

BLAST of Sed0025783 vs. ExPASy TrEMBL
Match: A0A6J1G3W1 (RNA-binding protein 24-A OS=Cucurbita moschata OX=3662 GN=LOC111450546 PE=4 SV=1)

HSP 1 Score: 528.5 bits (1360), Expect = 1.7e-146
Identity = 258/284 (90.85%), Postives = 267/284 (94.01%), Query Frame = 0


Query: 1   MAYQRLPGPSSLSGSSSSSGFLNSPFGDTTYTKVFVGGLAWETHSDTMRRYFQQFGDILE 60
           MAYQ   GPSS+SGSSSSSGFLNSPFGDTTYTKVFVGGLAWET S+TMRRYF+QFG+ILE
Sbjct: 1   MAYQHGRGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE 60

Query: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACVDPTPIIDGRQANCNLASLGRPRPPISYGR 120
           AVVITDKNTGRSKGYGFVTFRDPESARRACVDPTPIIDGR+ANCNLASLGRPRPPISYGR
Sbjct: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACVDPTPIIDGRRANCNLASLGRPRPPISYGR 120

Query: 121 LRPPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGSEYVHPQGGYNPF 180
           LRPPAVYVGGMQPNRG YIGNFGYQQPVSYAYQQGLAYPPYGYATYG EYV+PQGGYNPF
Sbjct: 121 LRPPAVYVGGMQPNRGNYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPF 180

Query: 181 LGQQYLQIYGVSGSASPTIYHYGQFGQTFPGGHGYGAVHGYAMPSPQIVQFSGHNVNALP 240
           +GQQYLQIYGV GSASP IYHYGQ GQT PGGHGYGAVHGYAMPSPQIVQF G NVN L 
Sbjct: 181 VGQQYLQIYGVPGSASPAIYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFGGPNVNPLT 240

Query: 241 SSPMPTIQAPYHSGIPAPVAAQPQFVVHSP-QFLQGSGSDQTSG 284
           SSPMPTIQAPY SGIPAPVAAQPQF+VHSP QF+QGS SDQTSG
Sbjct: 241 SSPMPTIQAPYPSGIPAPVAAQPQFIVHSPSQFVQGSSSDQTSG 284

[Close]

BLAST of Sed0025783 vs. ExPASy TrEMBL
Match: A0A6J1DNT6 (RNA-binding protein 24-A OS=Momordica charantia OX=3673 GN=LOC111022908 PE=4 SV=1)

HSP 1 Score: 526.9 bits (1356), Expect = 5.1e-146
Identity = 254/284 (89.44%), Postives = 268/284 (94.37%), Query Frame = 0


Query: 1   MAYQRLPGPSSLSGSSSSSGFLNSPFGDTTYTKVFVGGLAWETHSDTMRRYFQQFGDILE 60
           MAYQ +PGPSS+SGSS+SSGFLNSPFGDTTYTKVFVGGLAWET S+TMRR+F+QFG+ILE
Sbjct: 1   MAYQHIPGPSSISGSSTSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRHFEQFGEILE 60

Query: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACVDPTPIIDGRQANCNLASLGRPRPPISYGR 120
           AVVITDKNTGRSKGYGFVTFRDPESARRAC DPTPIIDGR+ANCNLASLGRPRPPISYGR
Sbjct: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPISYGR 120

Query: 121 LRPPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGSEYVHPQGGYNPF 180
           LRPPA YVGGMQPNRGT+IGNFGYQQPVSYAYQQGLAYPPYGYA YG EY++PQGGYNPF
Sbjct: 121 LRPPAPYVGGMQPNRGTFIGNFGYQQPVSYAYQQGLAYPPYGYAAYGPEYIYPQGGYNPF 180

Query: 181 LGQQYLQIYGVSGSASPTIYHYGQFGQTFPGGHGYGAVHGYAMPSPQIVQFSGHNVNALP 240
           LGQQYLQIYG+ GS SP IYHYGQ GQT PGGHGYG VHGYAMPSPQIVQFSG NVNAL 
Sbjct: 181 LGQQYLQIYGMPGSTSPAIYHYGQLGQTVPGGHGYGTVHGYAMPSPQIVQFSGPNVNALT 240

Query: 241 SSPMPTIQAPYHSGIPAPVAAQPQFVVHSP-QFLQGSGSDQTSG 284
           SSP+PTIQAPY SGIPAPVAAQPQFVVHSP QF+QGSGSDQTSG
Sbjct: 241 SSPVPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG 284

[Close]

BLAST of Sed0025783 vs. ExPASy TrEMBL
Match: A0A6J1KGG8 (RNA-binding protein 24-A OS=Cucurbita maxima OX=3661 GN=LOC111494003 PE=4 SV=1)

HSP 1 Score: 522.7 bits (1345), Expect = 9.5e-145
Identity = 254/284 (89.44%), Postives = 265/284 (93.31%), Query Frame = 0


Query: 1   MAYQRLPGPSSLSGSSSSSGFLNSPFGDTTYTKVFVGGLAWETHSDTMRRYFQQFGDILE 60
           MAYQ   GPSS+SGSSSSSGFLNSPFGDTTYTKVFVGGLAWET S+TMRRYF+QFG+ILE
Sbjct: 1   MAYQHGRGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE 60

Query: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACVDPTPIIDGRQANCNLASLGRPRPPISYGR 120
           AVVITDKN+GRSKGYGFVTFRDPESARRACVDPTPIIDGR+ANCNLASLGRPRPPISYGR
Sbjct: 61  AVVITDKNSGRSKGYGFVTFRDPESARRACVDPTPIIDGRRANCNLASLGRPRPPISYGR 120

Query: 121 LRPPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGSEYVHPQGGYNPF 180
           LRPPAVYVGGMQPNRG Y GNFGYQQPVSYAYQQGLAYPPYGYATYG EYV+PQGGYNPF
Sbjct: 121 LRPPAVYVGGMQPNRGNYFGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPF 180

Query: 181 LGQQYLQIYGVSGSASPTIYHYGQFGQTFPGGHGYGAVHGYAMPSPQIVQFSGHNVNALP 240
           +GQQYLQIYGV GSASP IYHYGQ GQT PGGHGYGAVHGY MPSPQI+QF G NVN L 
Sbjct: 181 VGQQYLQIYGVPGSASPAIYHYGQLGQTVPGGHGYGAVHGYTMPSPQIMQFGGPNVNPLT 240

Query: 241 SSPMPTIQAPYHSGIPAPVAAQPQFVVHSP-QFLQGSGSDQTSG 284
           SSPMPTIQAPY SGIPAPVAAQPQF+VHSP QF+QGS SDQTSG
Sbjct: 241 SSPMPTIQAPYPSGIPAPVAAQPQFIVHSPSQFVQGSSSDQTSG 284

[Close]

BLAST of Sed0025783 vs. TAIR 10
Match: AT1G76460.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 360.9 bits (925), Expect = 9.2e-100
Identity = 177/291 (60.82%), Postives = 217/291 (74.57%), Query Frame = 0


Query: 1   MAYQRLPGPSSLSGSSSSSGFLNSPFGDTTYTKVFVGGLAWETHSDTMRRYFQQFGDILE 60
           MAYQ +PG        S   +LNSPFGDTT+TKVFVGGLAWET S+T+R++F+Q+G+ILE
Sbjct: 1   MAYQPVPG--------SGFHYLNSPFGDTTFTKVFVGGLAWETQSETLRQHFEQYGEILE 60

Query: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACVDPTPIIDGRQANCNLASLGRPRPPISY-- 120
           AVVI DKNTGRSKGYGFVTFRDPE+ARRAC DPTPIIDGR+ANCNLASLGRPRPP+ Y  
Sbjct: 61  AVVIADKNTGRSKGYGFVTFRDPEAARRACADPTPIIDGRRANCNLASLGRPRPPLPYAV 120

Query: 121 -----GRLRPPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGSEYVH- 180
                GRLRP + Y+G +Q  RG+ IGN+ YQQP+ Y YQQG+ Y PYG   YG EY++ 
Sbjct: 121 IPNMPGRLRPASPYIGNVQGPRGSLIGNYPYQQPLPYNYQQGVVY-PYGVTAYGPEYMYS 180

Query: 181 -PQGGYNPFLGQQYLQIYGVSGSASPTIYHYGQFGQTFPGGHGYGAVHGYAMPSPQIVQF 240
             QG Y+P++GQQYLQ+YGV G+ +  +Y YGQ  QT P GHGY AV GY++P   I+Q 
Sbjct: 181 QSQGLYSPYMGQQYLQVYGVPGAVNSPVYQYGQLSQTIPNGHGYTAVQGYSVPGSHILQL 240

Query: 241 SGHNVNALPSSPMPTIQAPYHSGIPAPVAAQPQFVVHSPQFLQGSGSDQTS 283
            G  V+ + +S MP +QAPY SGIP P   Q   +VHSPQF+Q + SDQT+
Sbjct: 241 GGPTVSTMTTSSMPALQAPYPSGIPGPAPVQSHIIVHSPQFMQSTASDQTT 282

[Close]

BLAST of Sed0025783 vs. TAIR 10
Match: AT1G20880.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 318.9 bits (816), Expect = 4.0e-87
Identity = 168/292 (57.53%), Postives = 202/292 (69.18%), Query Frame = 0


Query: 1   MAYQRLPGPSSLSGSSSSSGFLNSPFGDTTYTKVFVGGLAWETHSDTMRRYFQQFGDILE 60
           MAY  +P        SS   +LNSPFGDTT+TKVFVGGLAWET S+T+RR+F Q+GDILE
Sbjct: 1   MAYHSIP--------SSGFHYLNSPFGDTTFTKVFVGGLAWETQSETLRRHFDQYGDILE 60

Query: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACVDPTPIIDGRQANCNLASLGRPRPPISY-- 120
           AVVITDKNTGRSKGYGFVTFRDPE+ARRACVDPTPIIDGR+ANCNLASLGR RPP+ Y  
Sbjct: 61  AVVITDKNTGRSKGYGFVTFRDPEAARRACVDPTPIIDGRRANCNLASLGRSRPPMQYAV 120

Query: 121 -----GRLRPPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGSEYVH- 180
                GR+RPP+ YVG +Q  RG + G+  Y QP +Y YQQG+ Y PYG   YG +Y++ 
Sbjct: 121 IPHAPGRVRPPSPYVGSVQSPRGLHFGSHPYHQPPTYNYQQGVVY-PYGVTPYGPDYMYS 180

Query: 181 -PQGGYNPFLGQQYLQIYGVSGSASPTIYHYGQFGQTFPGGHGYGAVHGYAMPSPQIVQF 240
             QG Y P++GQQYLQ+YGV G+ +   Y YGQ   T PG HGY A  GY+ P   ++Q 
Sbjct: 181 QSQGFYGPYMGQQYLQVYGVPGAVNSPGYQYGQLSHTIPGAHGYTAGQGYSHPGSHVLQL 240

Query: 241 SGHNVNALPSSPMPTIQAPYHSGIPAPVAAQPQFVVHSPQFLQGSGSDQTSG 284
                    +SPM  IQ+PY S  P+    Q   V   PQ++Q SGSDQT+G
Sbjct: 241 GA-------TSPMSAIQSPYPS--PSAPTHQRVIVQTPPQYIQSSGSDQTTG 274

[Close]

BLAST of Sed0025783 vs. TAIR 10
Match: AT1G20880.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 318.9 bits (816), Expect = 4.0e-87
Identity = 168/292 (57.53%), Postives = 202/292 (69.18%), Query Frame = 0


Query: 1   MAYQRLPGPSSLSGSSSSSGFLNSPFGDTTYTKVFVGGLAWETHSDTMRRYFQQFGDILE 60
           MAY  +P        SS   +LNSPFGDTT+TKVFVGGLAWET S+T+RR+F Q+GDILE
Sbjct: 1   MAYHSIP--------SSGFHYLNSPFGDTTFTKVFVGGLAWETQSETLRRHFDQYGDILE 60

Query: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACVDPTPIIDGRQANCNLASLGRPRPPISY-- 120
           AVVITDKNTGRSKGYGFVTFRDPE+ARRACVDPTPIIDGR+ANCNLASLGR RPP+ Y  
Sbjct: 61  AVVITDKNTGRSKGYGFVTFRDPEAARRACVDPTPIIDGRRANCNLASLGRSRPPMQYAV 120

Query: 121 -----GRLRPPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGSEYVH- 180
                GR+RPP+ YVG +Q  RG + G+  Y QP +Y YQQG+ Y PYG   YG +Y++ 
Sbjct: 121 IPHAPGRVRPPSPYVGSVQSPRGLHFGSHPYHQPPTYNYQQGVVY-PYGVTPYGPDYMYS 180

Query: 181 -PQGGYNPFLGQQYLQIYGVSGSASPTIYHYGQFGQTFPGGHGYGAVHGYAMPSPQIVQF 240
             QG Y P++GQQYLQ+YGV G+ +   Y YGQ   T PG HGY A  GY+ P   ++Q 
Sbjct: 181 QSQGFYGPYMGQQYLQVYGVPGAVNSPGYQYGQLSHTIPGAHGYTAGQGYSHPGSHVLQL 240

Query: 241 SGHNVNALPSSPMPTIQAPYHSGIPAPVAAQPQFVVHSPQFLQGSGSDQTSG 284
                    +SPM  IQ+PY S  P+    Q   V   PQ++Q SGSDQT+G
Sbjct: 241 GA-------TSPMSAIQSPYPS--PSAPTHQRVIVQTPPQYIQSSGSDQTTG 274

[Close]

BLAST of Sed0025783 vs. TAIR 10
Match: AT1G22330.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 189.9 bits (481), Expect = 2.8e-48
Identity = 130/286 (45.45%), Postives = 156/286 (54.55%), Query Frame = 0


Query: 17  SSSGFLNSPFGDTTYTKVFVGGLAWETHSDTMRRYFQQFGDILEAVVITDKNTGRSKGYG 76
           S++ +  SPFGDTT+TKVFVGGLAWET +D MRRYF QFG+ILEAV+ITDK TG+SKGYG
Sbjct: 2   SNTSYYRSPFGDTTHTKVFVGGLAWETPTDEMRRYFDQFGEILEAVIITDKATGKSKGYG 61

Query: 77  FVTFRDPESARRACVDPTPIIDGRQANCNLASLGRPRP--PISYGRLRPPAVYVGGMQPN 136
           FVTFRD +SA RA  DP P+IDGR+ANCN+AS GRPRP  P   G+   P+ Y GG Q +
Sbjct: 62  FVTFRDSDSATRAVADPNPVIDGRKANCNIASFGRPRPSTPRGRGQGGSPSQYQGGGQSS 121

Query: 137 RGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGSEYVHPQGGYNPFLGQ-QYL--QIYGV 196
                   G   PV  A    L YP YGY TY SEY + Q  YN  L Q QY   Q+YG 
Sbjct: 122 ------YTGMAAPVQQAAAAQLMYPSYGY-TYNSEYGYHQALYNAQLQQAQYYQQQMYGG 181

Query: 197 SGSASPTI-------YHYGQFGQTFPGGH---GYGAVH--------GYAMPSPQIVQFSG 256
            G+ SP+        Y+Y Q     P  H    Y   H           +PS        
Sbjct: 182 GGATSPSSSNIMPSPYYYLQAPSPRPYLHHQQHYQYHHHQQQQQQQQQRLPSASSYLIYP 241

Query: 257 HNVNALPSSPMPTIQAPYHSGIPAPVAAQPQFVVHSPQFLQGSGSD 280
            NV A   S +PT Q P  S   +          H+PQ +   G +
Sbjct: 242 SNVEAPTPSNVPTSQGPLSSSTES----------HAPQQVSEEGGE 270

[Close]

BLAST of Sed0025783 vs. TAIR 10
Match: AT1G78260.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 182.2 bits (461), Expect = 5.9e-46
Identity = 115/249 (46.18%), Postives = 146/249 (58.63%), Query Frame = 0


Query: 17  SSSGFLNSPFGDTTYTKVFVGGLAWETHSDTMRRYFQQFGDILEAVVITDKNTGRSKGYG 76
           S + +  SPFGDTTYTKVFVGGLAWET +D MRRYF+QFG+ILEAV+ITDKNTG+SKGYG
Sbjct: 2   SQTSYYRSPFGDTTYTKVFVGGLAWETPTDEMRRYFEQFGEILEAVIITDKNTGKSKGYG 61

Query: 77  FVTFRDPESARRACVDPTPIIDGRQANCNLASLGRPR--PPISYGRLRPPAVYVGGMQPN 136
           FVTFR+ +SA RA  DP P+IDGR+ANCN+AS GRPR  PP   G+   P+ Y  G    
Sbjct: 62  FVTFRESDSATRAVADPNPVIDGRKANCNIASFGRPRPSPPRGRGQTGSPSQYQSG---G 121

Query: 137 RGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGSEYVHPQGGYNPFLG-----QQYLQIY 196
             TY    G   P+  A    L YP YGY     ++ + Q  YN  L      QQ  Q+Y
Sbjct: 122 PSTYT---GMAAPLPPAAAPQLMYPSYGYTYNPDQFGYHQALYNTQLQQAQYYQQQQQLY 181

Query: 197 GVSGSASPTIYHYGQFGQTFPGGHGYGAVHGYAMPSPQIVQFSGHNVNALPSSPMPTIQA 256
           G  G+ SP+       G T      Y   +GY++ +P+ V +  H+    P +P    Q 
Sbjct: 182 G-GGATSPS-----SSGATIMPSPYY---YGYSLQAPR-VPYQHHHHLPQPYNP----QQ 230

Query: 257 PYHSGIPAP 259
            +H    +P
Sbjct: 242 HHHQRFSSP 230

The following BLAST results are available for this feature:

BLAST of Sed0025783 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146763.1	9.4e-147	91.26	RNA-binding protein 24-A [Cucumis sativus] >KGN48031.2 hypothetical protein Csa_...	[more]
XP_008464801.1	1.6e-146	91.26	PREDICTED: RNA-binding protein 24-A [Cucumis melo]	[more]
KAA0045404.1	1.6e-146	91.26	RNA-binding protein 24-A [Cucumis melo var. makuwa] >TYK11333.1 RNA-binding prot...	[more]
XP_022946505.1	3.6e-146	90.85	RNA-binding protein 24-A [Cucurbita moschata] >XP_022946506.1 RNA-binding protei...	[more]
KAG6599081.1	3.6e-146	90.85	putative RNA-binding protein ARP1, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Sed0025783 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M1S3	3.1e-31	39.93	Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana OX=3702 GN=ARP1 PE=2 S...	[more]
Q6GQD3	7.0e-28	40.30	RNA-binding protein 24-A OS=Xenopus laevis OX=8355 GN=rbm24-a PE=2 SV=1	[more]
D3Z4I3	1.2e-27	41.00	RNA-binding protein 24 OS=Mus musculus OX=10090 GN=Rbm24 PE=1 SV=1	[more]
Q9I8B3	1.6e-27	41.38	RNA-binding protein 24-B OS=Xenopus laevis OX=8355 GN=rbm24-b PE=2 SV=1	[more]
Q76LC6	3.5e-27	40.19	RNA-binding protein 24 OS=Danio rerio OX=7955 GN=rbm24 PE=2 SV=1	[more]

BLAST of Sed0025783 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CHF9	7.8e-147	91.26	RNA-binding protein 24-A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CME8	7.8e-147	91.26	RNA-binding protein 24-A OS=Cucumis melo OX=3656 GN=LOC103502602 PE=4 SV=1	[more]
A0A6J1G3W1	1.7e-146	90.85	RNA-binding protein 24-A OS=Cucurbita moschata OX=3662 GN=LOC111450546 PE=4 SV=1	[more]
A0A6J1DNT6	5.1e-146	89.44	RNA-binding protein 24-A OS=Momordica charantia OX=3673 GN=LOC111022908 PE=4 SV=...	[more]
A0A6J1KGG8	9.5e-145	89.44	RNA-binding protein 24-A OS=Cucurbita maxima OX=3661 GN=LOC111494003 PE=4 SV=1	[more]

BLAST of Sed0025783 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G76460.1	9.2e-100	60.82	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G20880.1	4.0e-87	57.53	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G20880.2	4.0e-87	57.53	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G22330.1	2.8e-48	45.45	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G78260.1	5.9e-46	46.18	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 33..105 e-value: 8.5E-23 score: 91.7
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 34..89 e-value: 8.3E-17 score: 60.8
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 32..109 score: 16.926517
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 12..120 e-value: 4.5E-24 score: 86.9
IPR037366	BOULE/DAZ family	PANTHER	PTHR11176	BOULE-RELATED	coord: 1..279
None	No IPR available	PANTHER	PTHR11176:SF32	RNA-BINDING PROTEIN 38-LIKE ISOFORM X1	coord: 1..279
None	No IPR available	CDD	cd12384	RRM_RBM24_RBM38_like	coord: 32..107 e-value: 4.30436E-45 score: 145.065
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 31..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0025783.1	Sed0025783.1	mRNA
Sed0025783.2	Sed0025783.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030154	cell differentiation
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding