Sed0025728 (gene) Chayote v1

Overview
NameSed0025728
Typegene
OrganismSechium edule (Chayote v1)
DescriptionRING-H2 zinc finger protein
LocationLG01: 63455072 .. 63456651 (+)
RNA-Seq ExpressionSed0025728
SyntenySed0025728
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTTCATCTTGTTCCTTCAAATTTGCCCTGTTCCAAATAGAATCACAACAAACCCTAAAAAGCATGTCCAAATCCCCCAACCCCTTTCCCTCTCCTGAATCCCTCGCCGAATGGCTCCAACCCCGCCTCCCCTCCGATTCATTTTCTTCATGGGGCGTAAACCCCGCCACCAAAAACGTCCACAATCTCTGGATCGAGCTCTCCCAAGGGGAAATTTCCCTCTCCGATTCAACCCCACCGATCCGCACCCTCCAAGTCCTTTCCCTTCGAATCCTCGACCCCAACCGAACCCGGGTTCTCCTCGAATCCCACCAGCAGCTCTCCGACGGCTCGACCCGGTCTCGAAATCGACCCTTGTCCGAGAAAATGAAGCCCCACGAAACCCTTGAATCCGCCGTCTACCGGGCTGTCCAAGAAGAGCTCGGTTCGGTTCTTGGCGGCTCTGATTGCTCTGATGTTGTTACGATTGTGCCCGATTCGTATCGGGTTGCGGTCGAGGACCGGGCCTCGGACTCTTACCCGGGTTTGCCCTGTTCTTACGTTTTGCATCGTGTGGATGTTTGGGTGGATGGTTTGCCGGAGGGGGAGTTTTGCACTGTGGAGGAAGAGGAGAAAGGGATTGCGGTTGAGGCTGTGACTGTTAAGAAGCATTTCTGGAAATGGGTTAGTCTTGATTCTGTGGATTTTTGAGTTCTATAGCTTTACTTTTATAATTTATGCTCATATGTTGAGTTCAATAACACATGCTGTGGACGTAGGCATGAACTATAGTCATTACATTCTATTTTATAGGAAATGATGTATGAAAATAACAAAAGAGGAACTATGTAAGTATAAAAAGCCACTCCAGTGTATAATAAGATTGGATAGACTATAATACTTAAATGGAATGACACTGTGCCCTAGTCATGGCTAGATAAATTATAGATTTTATTAGTTTGTTTTTCTAAAGAGATTCTCCCTCTGTCAAAGACCAAAATGTGCTAATGATTAGAATCCAAAGGGTCTACAAAAAGATTGGTAGACATTTTTTTTTTTTACTATCGGGTCAGCTTGTGCGCACCTCGACTAATGTCACGGGACATAATGTCTGACCCTACAATATTTGGATGTCAATGAAACTCGTAGGTGACCACCATAAATTGAACTCATCACCTTAAATACCTCAAGATCTCCTTTGATCACTTGAGTCACTCCGTGATGGTTCTATATGACAATTGAATACTATGGACGTTAGGATGGAAGGATTGCATGAGCTTGAGTTCTTAAATGGAATGTAGTGCTGGTTGAACTATGGCGCTTATTACATTCTATATATATACTTTATGTCGGTTGAGCTATGGTGTTGATGCCTTTATGTCTTATATATTGTTTCATTATCTTTTTGAGTTGGAAGTTTAACTAATATACTTTCTGTCTTTATGTGTTGAGTTCAACAACAATTGGTGTGAAGTTTTATTTTTGATATGTAACTATTCGAGCCAATTTACACATATTTCGTCTATTGTTACGAATTCATGGGACATGCCACGTAACTCTATAATATTTTTATGTCAAGGAAATTTGTAAGAAATTAATTC

mRNA sequence

TCTTCATCTTGTTCCTTCAAATTTGCCCTGTTCCAAATAGAATCACAACAAACCCTAAAAAGCATGTCCAAATCCCCCAACCCCTTTCCCTCTCCTGAATCCCTCGCCGAATGGCTCCAACCCCGCCTCCCCTCCGATTCATTTTCTTCATGGGGCGTAAACCCCGCCACCAAAAACGTCCACAATCTCTGGATCGAGCTCTCCCAAGGGGAAATTTCCCTCTCCGATTCAACCCCACCGATCCGCACCCTCCAAGTCCTTTCCCTTCGAATCCTCGACCCCAACCGAACCCGGGTTCTCCTCGAATCCCACCAGCAGCTCTCCGACGGCTCGACCCGGTCTCGAAATCGACCCTTGTCCGAGAAAATGAAGCCCCACGAAACCCTTGAATCCGCCGTCTACCGGGCTGTCCAAGAAGAGCTCGGTTCGGTTCTTGGCGGCTCTGATTGCTCTGATGTTGTTACGATTGTGCCCGATTCGTATCGGGTTGCGGTCGAGGACCGGGCCTCGGACTCTTACCCGGGTTTGCCCTGTTCTTACGTTTTGCATCGTGTGGATGTTTGGGTGGATGGTTTGCCGGAGGGGGAGTTTTGCACTGTGGAGGAAGAGGAGAAAGGGATTGCGGTTGAGGCTGTGACTGTTAAGAAGCATTTCTGGAAATGGGTTAGTCTTGATTCTGTGGATTTTTGAGTTCTATAGCTTTACTTTTATAATTTATGCTCATATGTTGAGTTCAATAACACATGCTGTGGACGTAGGCATGAACTATAGTCATTACATTCTATTTTATAGGAAATGATGTATGAAAATAACAAAAGAGGAACTATGTAAGTATAAAAAGCCACTCCAGTGTATAATAAGATTGGATAGACTATAATACTTAAATGGAATGACACTGTGCCCTAGTCATGGCTAGATAAATTATAGATTTTATTAGTTTGTTTTTCTAAAGAGATTCTCCCTCTGTCAAAGACCAAAATGTGCTAATGATTAGAATCCAAAGGGTCTACAAAAAGATTGGTAGACATTTTTTTTTTTTACTATCGGGTCAGCTTGTGCGCACCTCGACTAATGTCACGGGACATAATGTCTGACCCTACAATATTTGGATGTCAATGAAACTCGTAGGTGACCACCATAAATTGAACTCATCACCTTAAATACCTCAAGATCTCCTTTGATCACTTGAGTCACTCCGTGATGGTTCTATATGACAATTGAATACTATGGACGTTAGGATGGAAGGATTGCATGAGCTTGAGTTCTTAAATGGAATGTAGTGCTGGTTGAACTATGGCGCTTATTACATTCTATATATATACTTTATGTCGGTTGAGCTATGGTGTTGATGCCTTTATGTCTTATATATTGTTTCATTATCTTTTTGAGTTGGAAGTTTAACTAATATACTTTCTGTCTTTATGTGTTGAGTTCAACAACAATTGGTGTGAAGTTTTATTTTTGATATGTAACTATTCGAGCCAATTTACACATATTTCGTCTATTGTTACGAATTCATGGGACATGCCACGTAACTCTATAATATTTTTATGTCAAGGAAATTTGTAAGAAATTAATTC

Coding sequence (CDS)

ATGTCCAAATCCCCCAACCCCTTTCCCTCTCCTGAATCCCTCGCCGAATGGCTCCAACCCCGCCTCCCCTCCGATTCATTTTCTTCATGGGGCGTAAACCCCGCCACCAAAAACGTCCACAATCTCTGGATCGAGCTCTCCCAAGGGGAAATTTCCCTCTCCGATTCAACCCCACCGATCCGCACCCTCCAAGTCCTTTCCCTTCGAATCCTCGACCCCAACCGAACCCGGGTTCTCCTCGAATCCCACCAGCAGCTCTCCGACGGCTCGACCCGGTCTCGAAATCGACCCTTGTCCGAGAAAATGAAGCCCCACGAAACCCTTGAATCCGCCGTCTACCGGGCTGTCCAAGAAGAGCTCGGTTCGGTTCTTGGCGGCTCTGATTGCTCTGATGTTGTTACGATTGTGCCCGATTCGTATCGGGTTGCGGTCGAGGACCGGGCCTCGGACTCTTACCCGGGTTTGCCCTGTTCTTACGTTTTGCATCGTGTGGATGTTTGGGTGGATGGTTTGCCGGAGGGGGAGTTTTGCACTGTGGAGGAAGAGGAGAAAGGGATTGCGGTTGAGGCTGTGACTGTTAAGAAGCATTTCTGGAAATGGGTTAGTCTTGATTCTGTGGATTTTTGA

Protein sequence

MSKSPNPFPSPESLAEWLQPRLPSDSFSSWGVNPATKNVHNLWIELSQGEISLSDSTPPIRTLQVLSLRILDPNRTRVLLESHQQLSDGSTRSRNRPLSEKMKPHETLESAVYRAVQEELGSVLGGSDCSDVVTIVPDSYRVAVEDRASDSYPGLPCSYVLHRVDVWVDGLPEGEFCTVEEEEKGIAVEAVTVKKHFWKWVSLDSVDF
Homology
BLAST of Sed0025728 vs. NCBI nr
Match: XP_022974352.1 (uncharacterized protein LOC111472979 [Cucurbita maxima])

HSP 1 Score: 312.8 bits (800), Expect = 2.3e-81
Identity = 152/209 (72.73%), Postives = 181/209 (86.60%), Query Frame = 0

Query: 6   NPFPSPESLAEWLQPRLPSDSFSSWGVNPATKNVHNLWIELSQGEISLSDSTPPIRTLQV 65
           +PF SP+SL++WL+PRLPSDSF+SWGV P TKNVHNLW+ELS+GE SL+DSTPPIRT+QV
Sbjct: 86  HPFASPQSLSDWLKPRLPSDSFASWGVKPGTKNVHNLWLELSEGETSLADSTPPIRTVQV 145

Query: 66  LSLRILDPNRTRVLLESHQQLSDGSTRSRNRPLSEKMKPHETLESAVYRAVQEELGSVLG 125
           LSLRI+D N  R+LLESHQQLSDG+ R+RNRPLSEKMKP+ET ESAVYRAV+EELGS+LG
Sbjct: 146 LSLRIID-NHRRILLESHQQLSDGTLRNRNRPLSEKMKPNETPESAVYRAVKEELGSILG 205

Query: 126 GSDCSDVVTIVPDSYRVAVEDRASDSYPGLPCSYVLHRVDVWVDGLPEGEFCTVEE---- 185
            SDCS++V IVPDSY++ +E+R S SYPGLP  YVLH +DV V+GLP+ +FCTVEE    
Sbjct: 206 DSDCSEIVKIVPDSYKMKIEERNSASYPGLPACYVLHSMDVLVEGLPKEDFCTVEEEEYA 265

Query: 186 --EEKGIAVEAVTVKKHFWKWVSLDSVDF 209
             EE  IA EAV+VKKHFWKWVSLDS+DF
Sbjct: 266 NSEESSIADEAVSVKKHFWKWVSLDSLDF 293

BLAST of Sed0025728 vs. NCBI nr
Match: KAG6579291.1 (hypothetical protein SDJN03_23739, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 310.5 bits (794), Expect = 1.1e-80
Identity = 151/209 (72.25%), Postives = 180/209 (86.12%), Query Frame = 0

Query: 6   NPFPSPESLAEWLQPRLPSDSFSSWGVNPATKNVHNLWIELSQGEISLSDSTPPIRTLQV 65
           +PF SP+SL++WL+PRLPSDSF+SWGV P TKNVHNLW+ELS+GE SL+DS PPIRT+QV
Sbjct: 120 HPFTSPQSLSDWLKPRLPSDSFASWGVKPGTKNVHNLWLELSEGETSLADSNPPIRTVQV 179

Query: 66  LSLRILDPNRTRVLLESHQQLSDGSTRSRNRPLSEKMKPHETLESAVYRAVQEELGSVLG 125
           LSLRI+D N  R+LLESHQQLSDG+ R+RNRPLSEKMKP+ET ESAVYRAV+EELGS+LG
Sbjct: 180 LSLRIID-NHRRILLESHQQLSDGTLRNRNRPLSEKMKPNETPESAVYRAVKEELGSILG 239

Query: 126 GSDCSDVVTIVPDSYRVAVEDRASDSYPGLPCSYVLHRVDVWVDGLPEGEFCTVEE---- 185
            SDCS++V IVPDSY++ +E+R S SYPGLP  YVLH +DV V+GLP+ +FCTVEE    
Sbjct: 240 DSDCSEIVKIVPDSYKMKIEERNSASYPGLPACYVLHSMDVLVEGLPKEDFCTVEEEEYV 299

Query: 186 --EEKGIAVEAVTVKKHFWKWVSLDSVDF 209
             EE  IA EAV+VKKHFWKWVSLDS+DF
Sbjct: 300 NSEETSIADEAVSVKKHFWKWVSLDSLDF 327

BLAST of Sed0025728 vs. NCBI nr
Match: XP_022922297.1 (uncharacterized protein LOC111430319 [Cucurbita moschata] >KAG7025097.1 hypothetical protein SDJN02_13920, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 310.5 bits (794), Expect = 1.1e-80
Identity = 151/209 (72.25%), Postives = 180/209 (86.12%), Query Frame = 0

Query: 6   NPFPSPESLAEWLQPRLPSDSFSSWGVNPATKNVHNLWIELSQGEISLSDSTPPIRTLQV 65
           +PF SP+SL++WL+PRLPSDSF+SWGV P TKNVHNLW+ELS+GE SL+DS PPIRT+QV
Sbjct: 86  HPFTSPQSLSDWLKPRLPSDSFASWGVKPGTKNVHNLWLELSEGETSLADSNPPIRTVQV 145

Query: 66  LSLRILDPNRTRVLLESHQQLSDGSTRSRNRPLSEKMKPHETLESAVYRAVQEELGSVLG 125
           LSLRI+D N  R+LLESHQQLSDG+ R+RNRPLSEKMKP+ET ESAVYRAV+EELGS+LG
Sbjct: 146 LSLRIID-NHRRILLESHQQLSDGTLRNRNRPLSEKMKPNETPESAVYRAVKEELGSILG 205

Query: 126 GSDCSDVVTIVPDSYRVAVEDRASDSYPGLPCSYVLHRVDVWVDGLPEGEFCTVEE---- 185
            SDCS++V IVPDSY++ +E+R S SYPGLP  YVLH +DV V+GLP+ +FCTVEE    
Sbjct: 206 DSDCSEIVKIVPDSYKMKIEERNSASYPGLPACYVLHSMDVLVEGLPKEDFCTVEEEEYV 265

Query: 186 --EEKGIAVEAVTVKKHFWKWVSLDSVDF 209
             EE  IA EAV+VKKHFWKWVSLDS+DF
Sbjct: 266 NSEETSIADEAVSVKKHFWKWVSLDSLDF 293

BLAST of Sed0025728 vs. NCBI nr
Match: XP_023550799.1 (uncharacterized protein LOC111808831 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 310.1 bits (793), Expect = 1.5e-80
Identity = 151/209 (72.25%), Postives = 180/209 (86.12%), Query Frame = 0

Query: 6   NPFPSPESLAEWLQPRLPSDSFSSWGVNPATKNVHNLWIELSQGEISLSDSTPPIRTLQV 65
           +PF SP+SL++WL+PRLPSDSF+SWGV P TKNVHNLW+ELS+GE SL+DS PPIRT+QV
Sbjct: 86  HPFTSPQSLSDWLKPRLPSDSFASWGVKPGTKNVHNLWLELSEGETSLADSNPPIRTVQV 145

Query: 66  LSLRILDPNRTRVLLESHQQLSDGSTRSRNRPLSEKMKPHETLESAVYRAVQEELGSVLG 125
           LSLRI+D N  R+LLESHQQLSDG+ R+RNRPLSEKMKP+ET ESAVYRAV+EELGS+LG
Sbjct: 146 LSLRIID-NHRRILLESHQQLSDGTLRNRNRPLSEKMKPNETPESAVYRAVKEELGSILG 205

Query: 126 GSDCSDVVTIVPDSYRVAVEDRASDSYPGLPCSYVLHRVDVWVDGLPEGEFCTVEE---- 185
            SDCS++V IVPDSY++ +E+R S SYPGLP  YVLH +DV V+GLP+ +FCTVEE    
Sbjct: 206 DSDCSEIVKIVPDSYKMKIEERNSASYPGLPACYVLHSMDVVVEGLPKEDFCTVEEEEYV 265

Query: 186 --EEKGIAVEAVTVKKHFWKWVSLDSVDF 209
             EE  IA EAV+VKKHFWKWVSLDS+DF
Sbjct: 266 NSEETSIADEAVSVKKHFWKWVSLDSLDF 293

BLAST of Sed0025728 vs. NCBI nr
Match: XP_038874473.1 (uncharacterized protein LOC120067121 isoform X2 [Benincasa hispida])

HSP 1 Score: 307.8 bits (787), Expect = 7.3e-80
Identity = 150/200 (75.00%), Postives = 173/200 (86.50%), Query Frame = 0

Query: 8   FPSPESLAEWLQPRLPSDSFSSWGVNPATKNVHNLWIELSQGEISLSDSTPPIRTLQVLS 67
           F SP+SL+EWL+PRLPSDSF+SWGVNP TKNVHNLW+E+SQGE SL+DS PPIRTL VLS
Sbjct: 86  FTSPQSLSEWLKPRLPSDSFASWGVNPGTKNVHNLWLEISQGETSLADSNPPIRTLHVLS 145

Query: 68  LRILDPNRTRVLLESHQQLSDGSTRSRNRPLSEKMKPHETLESAVYRAVQEELGSVLGGS 127
           LRILD N  RVL+ESHQQLSDG+ R+RNRPLSEKMKP+ET ESAVYRAV+EELGS++G S
Sbjct: 146 LRILD-NHHRVLVESHQQLSDGTLRNRNRPLSEKMKPNETPESAVYRAVKEELGSIIGDS 205

Query: 128 DCSDVVTIVPDSYRVAVEDRASDSYPGLPCSYVLHRVDVWVDGLPEGEFCTVEEEEKG-- 187
           DCS +V IVPDSY++ +E+R S SYPGLP  YVLH +DVWV+GLPEGEFCTVEEEE G  
Sbjct: 206 DCSQIVRIVPDSYKMKIEERNSVSYPGLPACYVLHSMDVWVEGLPEGEFCTVEEEEYGNS 265

Query: 188 ----IAVEAVTVKKHFWKWV 202
               IA +AV+VKKHFWKWV
Sbjct: 266 EETSIADQAVSVKKHFWKWV 284

BLAST of Sed0025728 vs. ExPASy TrEMBL
Match: A0A6J1IA21 (uncharacterized protein LOC111472979 OS=Cucurbita maxima OX=3661 GN=LOC111472979 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 1.1e-81
Identity = 152/209 (72.73%), Postives = 181/209 (86.60%), Query Frame = 0

Query: 6   NPFPSPESLAEWLQPRLPSDSFSSWGVNPATKNVHNLWIELSQGEISLSDSTPPIRTLQV 65
           +PF SP+SL++WL+PRLPSDSF+SWGV P TKNVHNLW+ELS+GE SL+DSTPPIRT+QV
Sbjct: 86  HPFASPQSLSDWLKPRLPSDSFASWGVKPGTKNVHNLWLELSEGETSLADSTPPIRTVQV 145

Query: 66  LSLRILDPNRTRVLLESHQQLSDGSTRSRNRPLSEKMKPHETLESAVYRAVQEELGSVLG 125
           LSLRI+D N  R+LLESHQQLSDG+ R+RNRPLSEKMKP+ET ESAVYRAV+EELGS+LG
Sbjct: 146 LSLRIID-NHRRILLESHQQLSDGTLRNRNRPLSEKMKPNETPESAVYRAVKEELGSILG 205

Query: 126 GSDCSDVVTIVPDSYRVAVEDRASDSYPGLPCSYVLHRVDVWVDGLPEGEFCTVEE---- 185
            SDCS++V IVPDSY++ +E+R S SYPGLP  YVLH +DV V+GLP+ +FCTVEE    
Sbjct: 206 DSDCSEIVKIVPDSYKMKIEERNSASYPGLPACYVLHSMDVLVEGLPKEDFCTVEEEEYA 265

Query: 186 --EEKGIAVEAVTVKKHFWKWVSLDSVDF 209
             EE  IA EAV+VKKHFWKWVSLDS+DF
Sbjct: 266 NSEESSIADEAVSVKKHFWKWVSLDSLDF 293

BLAST of Sed0025728 vs. ExPASy TrEMBL
Match: A0A6J1E2U8 (uncharacterized protein LOC111430319 OS=Cucurbita moschata OX=3662 GN=LOC111430319 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 5.5e-81
Identity = 151/209 (72.25%), Postives = 180/209 (86.12%), Query Frame = 0

Query: 6   NPFPSPESLAEWLQPRLPSDSFSSWGVNPATKNVHNLWIELSQGEISLSDSTPPIRTLQV 65
           +PF SP+SL++WL+PRLPSDSF+SWGV P TKNVHNLW+ELS+GE SL+DS PPIRT+QV
Sbjct: 86  HPFTSPQSLSDWLKPRLPSDSFASWGVKPGTKNVHNLWLELSEGETSLADSNPPIRTVQV 145

Query: 66  LSLRILDPNRTRVLLESHQQLSDGSTRSRNRPLSEKMKPHETLESAVYRAVQEELGSVLG 125
           LSLRI+D N  R+LLESHQQLSDG+ R+RNRPLSEKMKP+ET ESAVYRAV+EELGS+LG
Sbjct: 146 LSLRIID-NHRRILLESHQQLSDGTLRNRNRPLSEKMKPNETPESAVYRAVKEELGSILG 205

Query: 126 GSDCSDVVTIVPDSYRVAVEDRASDSYPGLPCSYVLHRVDVWVDGLPEGEFCTVEE---- 185
            SDCS++V IVPDSY++ +E+R S SYPGLP  YVLH +DV V+GLP+ +FCTVEE    
Sbjct: 206 DSDCSEIVKIVPDSYKMKIEERNSASYPGLPACYVLHSMDVLVEGLPKEDFCTVEEEEYV 265

Query: 186 --EEKGIAVEAVTVKKHFWKWVSLDSVDF 209
             EE  IA EAV+VKKHFWKWVSLDS+DF
Sbjct: 266 NSEETSIADEAVSVKKHFWKWVSLDSLDF 293

BLAST of Sed0025728 vs. ExPASy TrEMBL
Match: A0A0A0KJQ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139030 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 1.1e-78
Identity = 151/207 (72.95%), Postives = 174/207 (84.06%), Query Frame = 0

Query: 8   FPSPESLAEWLQPRLPSDSFSSWGVNPATKNVHNLWIELSQGEISLSDSTPPIRTLQVLS 67
           F SP+SL+EWLQPRLPS SF+SWGV P TKN+HNLW+E+SQGE SL+DS PPIRTL VLS
Sbjct: 89  FTSPQSLSEWLQPRLPSHSFASWGVIPGTKNLHNLWLEISQGETSLADSNPPIRTLHVLS 148

Query: 68  LRILDPNRTRVLLESHQQLSDGSTRSRNRPLSEKMKPHETLESAVYRAVQEELGSVLGGS 127
           LRI+D N  R+LLESHQQLSDG+ R+RNRPLSEKMKP+ET ESAVYRAVQEELGS+LG S
Sbjct: 149 LRIID-NHHRLLLESHQQLSDGTLRNRNRPLSEKMKPNETPESAVYRAVQEELGSILGDS 208

Query: 128 DCSDVVTIVPDSYRVAVEDRASDSYPGLPCSYVLHRVDVWVDGLPEGEFCTVEEEE---- 187
           D S +V IVPDSYR+ +E+R S SYPGL  SYVLH +DVWV+GLP+G+FCTVEEEE    
Sbjct: 209 DYSQLVRIVPDSYRLKIEERDSVSYPGLSASYVLHSMDVWVEGLPDGDFCTVEEEEYVNS 268

Query: 188 --KGIAVEAVTVKKHFWKWVSLDSVDF 209
               IA  AV+VKKHFWKWVS +SVDF
Sbjct: 269 EDTNIADHAVSVKKHFWKWVSPESVDF 294

BLAST of Sed0025728 vs. ExPASy TrEMBL
Match: A0A1S3AUP2 (uncharacterized protein LOC103483001 OS=Cucumis melo OX=3656 GN=LOC103483001 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 6.9e-76
Identity = 145/206 (70.39%), Postives = 172/206 (83.50%), Query Frame = 0

Query: 8   FPSPESLAEWLQPRLPSDSFSSWGVNPATKNVHNLWIELSQGEISLSDSTPPIRTLQVLS 67
           F SP+SL+EWLQPRLPS SF+SWGV P TKN+HNLW+E+SQGE SL+DS PPIR L VLS
Sbjct: 90  FTSPQSLSEWLQPRLPSHSFASWGVIPGTKNLHNLWLEISQGETSLADSNPPIRILHVLS 149

Query: 68  LRILDPNRTRVLLESHQQLSDGSTRSRNRPLSEKMKPHETLESAVYRAVQEELGSVLGGS 127
           LRI+D N  R+LLESHQQLSDG+ R+RNRPLSEKMKP+ET ESAVYRAVQEELGS+L  S
Sbjct: 150 LRIID-NHHRLLLESHQQLSDGTLRNRNRPLSEKMKPNETPESAVYRAVQEELGSILADS 209

Query: 128 DCSDVVTIVPDSYRVAVEDRASDSYPGLPCSYVLHRVDVWVDGLPEGEFCTVEE------ 187
           DCS +V IVPDSY++ +E+R S SYPGLP  YVLH +D+ V+GLP+G+FCTVE+      
Sbjct: 210 DCSPLVRIVPDSYKLKIEERDSVSYPGLPACYVLHSMDIRVEGLPDGDFCTVEKEEYVNS 269

Query: 188 EEKGIAVEAVTVKKHFWKWVSLDSVD 208
           EE  IA +AV+VKKHFWKWVS +SVD
Sbjct: 270 EETNIADQAVSVKKHFWKWVSPESVD 294

BLAST of Sed0025728 vs. ExPASy TrEMBL
Match: A0A6J1CCN3 (uncharacterized protein LOC111009508 OS=Momordica charantia OX=3673 GN=LOC111009508 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 9.0e-76
Identity = 142/207 (68.60%), Postives = 172/207 (83.09%), Query Frame = 0

Query: 8   FPSPESLAEWLQPRLPSDSFSSWGVNPATKNVHNLWIELSQGEISLSDSTPPIRTLQVLS 67
           F SP+SL++WL PRLPSDSF+SWGV P TKNVHNLW+E+S+GE SL+DS PPIRT+QV+S
Sbjct: 88  FASPQSLSDWLGPRLPSDSFASWGVKPGTKNVHNLWLEISEGETSLADSNPPIRTVQVVS 147

Query: 68  LRILDPNRTRVLLESHQQLSDGSTRSRNRPLSEKMKPHETLESAVYRAVQEELGSVLGGS 127
           LRILD    RVL+ESHQ+LSDG+ R+RNRPLSEKMKP+ET ESAVYRAV+EELGS++G  
Sbjct: 148 LRILD-KHNRVLVESHQELSDGTLRNRNRPLSEKMKPNETPESAVYRAVKEELGSIIGDL 207

Query: 128 DCSDVVTIVPDSYRVAVEDRASDSYPGLPCSYVLHRVDVWVDGLPEGEFCTVEEEEKGIA 187
           DC ++V IVP+SY++ +E+R S SYPGLP  YVLH +DVWV+GLP+ EFCTVEEEE   +
Sbjct: 208 DCCEIVRIVPNSYKMKIEERNSVSYPGLPACYVLHSMDVWVEGLPDEEFCTVEEEEYEKS 267

Query: 188 VE-------AVTVKKHFWKWVSLDSVD 208
            E       AV+VKKHFWKWVS DSVD
Sbjct: 268 EETEIAHKAAVSVKKHFWKWVSADSVD 293

BLAST of Sed0025728 vs. TAIR 10
Match: AT5G24460.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 236.1 bits (601), Expect = 2.5e-62
Identity = 119/223 (53.36%), Postives = 159/223 (71.30%), Query Frame = 0

Query: 3   KSPNP------FPSPESLAEWLQPRLPSDSFSSWGVNPATKNVHNLWIELSQGEISLSDS 62
           +SP P      F +P+SL++WL+ RLPSDSF++WGV P TKNVHNLW+ELS GE SL+DS
Sbjct: 77  RSPPPPPPTQRFANPQSLSDWLESRLPSDSFAAWGVKPGTKNVHNLWLELSDGETSLADS 136

Query: 63  TPPIRTLQVLSLRILDPNRTRVLLESHQQLSDGSTRSRNRPLSEKMKPHETLESAVYRAV 122
           TPP+RT+ V+++R++  N  R+L+E+HQ+LSDGS R R RPLSEKMKP E+ + AV+RA+
Sbjct: 137 TPPVRTVNVVTVRVIGKN-GRILVEAHQELSDGSIRERFRPLSEKMKPEESPDEAVFRAI 196

Query: 123 QEELGSVLG--GSDCSDVVTIVPDSYRVAVEDRASDSYPGLPCSYVLHRVDVWVDGLPEG 182
           +EELGS+    G +    + I+P +Y   VE+R S SYPGLP  Y LH V+  V+GLPE 
Sbjct: 197 KEELGSIFNGDGDNIGQRIKILPGTYNRRVEERNSLSYPGLPARYALHSVNATVEGLPEQ 256

Query: 183 EFCTVEEEEKG-----------IAVEAVTVKKHFWKWVSLDSV 207
           +FCT E+E +G            A  AVTVK+H+WKWVS DS+
Sbjct: 257 DFCTEEKEYEGGDSTKDSVETLAAGNAVTVKRHYWKWVSPDSI 298

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022974352.12.3e-8172.73uncharacterized protein LOC111472979 [Cucurbita maxima][more]
KAG6579291.11.1e-8072.25hypothetical protein SDJN03_23739, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022922297.11.1e-8072.25uncharacterized protein LOC111430319 [Cucurbita moschata] >KAG7025097.1 hypothet... [more]
XP_023550799.11.5e-8072.25uncharacterized protein LOC111808831 [Cucurbita pepo subsp. pepo][more]
XP_038874473.17.3e-8075.00uncharacterized protein LOC120067121 isoform X2 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1IA211.1e-8172.73uncharacterized protein LOC111472979 OS=Cucurbita maxima OX=3661 GN=LOC111472979... [more]
A0A6J1E2U85.5e-8172.25uncharacterized protein LOC111430319 OS=Cucurbita moschata OX=3662 GN=LOC1114303... [more]
A0A0A0KJQ61.1e-7872.95Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139030 PE=4 SV=1[more]
A0A1S3AUP26.9e-7670.39uncharacterized protein LOC103483001 OS=Cucumis melo OX=3656 GN=LOC103483001 PE=... [more]
A0A6J1CCN39.0e-7668.60uncharacterized protein LOC111009508 OS=Momordica charantia OX=3673 GN=LOC111009... [more]
Match NameE-valueIdentityDescription
AT5G24460.12.5e-6253.36unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall;... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..103
NoneNo IPR availablePANTHERPTHR36395RING-H2 ZINC FINGER PROTEINcoord: 4..205

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0025728.1Sed0025728.1mRNA