Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTTCATCTTGTTCCTTCAAATTTGCCCTGTTCCAAATAGAATCACAACAAACCCTAAAAAGCATGTCCAAATCCCCCAACCCCTTTCCCTCTCCTGAATCCCTCGCCGAATGGCTCCAACCCCGCCTCCCCTCCGATTCATTTTCTTCATGGGGCGTAAACCCCGCCACCAAAAACGTCCACAATCTCTGGATCGAGCTCTCCCAAGGGGAAATTTCCCTCTCCGATTCAACCCCACCGATCCGCACCCTCCAAGTCCTTTCCCTTCGAATCCTCGACCCCAACCGAACCCGGGTTCTCCTCGAATCCCACCAGCAGCTCTCCGACGGCTCGACCCGGTCTCGAAATCGACCCTTGTCCGAGAAAATGAAGCCCCACGAAACCCTTGAATCCGCCGTCTACCGGGCTGTCCAAGAAGAGCTCGGTTCGGTTCTTGGCGGCTCTGATTGCTCTGATGTTGTTACGATTGTGCCCGATTCGTATCGGGTTGCGGTCGAGGACCGGGCCTCGGACTCTTACCCGGGTTTGCCCTGTTCTTACGTTTTGCATCGTGTGGATGTTTGGGTGGATGGTTTGCCGGAGGGGGAGTTTTGCACTGTGGAGGAAGAGGAGAAAGGGATTGCGGTTGAGGCTGTGACTGTTAAGAAGCATTTCTGGAAATGGGTTAGTCTTGATTCTGTGGATTTTTGAGTTCTATAGCTTTACTTTTATAATTTATGCTCATATGTTGAGTTCAATAACACATGCTGTGGACGTAGGCATGAACTATAGTCATTACATTCTATTTTATAGGAAATGATGTATGAAAATAACAAAAGAGGAACTATGTAAGTATAAAAAGCCACTCCAGTGTATAATAAGATTGGATAGACTATAATACTTAAATGGAATGACACTGTGCCCTAGTCATGGCTAGATAAATTATAGATTTTATTAGTTTGTTTTTCTAAAGAGATTCTCCCTCTGTCAAAGACCAAAATGTGCTAATGATTAGAATCCAAAGGGTCTACAAAAAGATTGGTAGACATTTTTTTTTTTTACTATCGGGTCAGCTTGTGCGCACCTCGACTAATGTCACGGGACATAATGTCTGACCCTACAATATTTGGATGTCAATGAAACTCGTAGGTGACCACCATAAATTGAACTCATCACCTTAAATACCTCAAGATCTCCTTTGATCACTTGAGTCACTCCGTGATGGTTCTATATGACAATTGAATACTATGGACGTTAGGATGGAAGGATTGCATGAGCTTGAGTTCTTAAATGGAATGTAGTGCTGGTTGAACTATGGCGCTTATTACATTCTATATATATACTTTATGTCGGTTGAGCTATGGTGTTGATGCCTTTATGTCTTATATATTGTTTCATTATCTTTTTGAGTTGGAAGTTTAACTAATATACTTTCTGTCTTTATGTGTTGAGTTCAACAACAATTGGTGTGAAGTTTTATTTTTGATATGTAACTATTCGAGCCAATTTACACATATTTCGTCTATTGTTACGAATTCATGGGACATGCCACGTAACTCTATAATATTTTTATGTCAAGGAAATTTGTAAGAAATTAATTC
mRNA sequence
TCTTCATCTTGTTCCTTCAAATTTGCCCTGTTCCAAATAGAATCACAACAAACCCTAAAAAGCATGTCCAAATCCCCCAACCCCTTTCCCTCTCCTGAATCCCTCGCCGAATGGCTCCAACCCCGCCTCCCCTCCGATTCATTTTCTTCATGGGGCGTAAACCCCGCCACCAAAAACGTCCACAATCTCTGGATCGAGCTCTCCCAAGGGGAAATTTCCCTCTCCGATTCAACCCCACCGATCCGCACCCTCCAAGTCCTTTCCCTTCGAATCCTCGACCCCAACCGAACCCGGGTTCTCCTCGAATCCCACCAGCAGCTCTCCGACGGCTCGACCCGGTCTCGAAATCGACCCTTGTCCGAGAAAATGAAGCCCCACGAAACCCTTGAATCCGCCGTCTACCGGGCTGTCCAAGAAGAGCTCGGTTCGGTTCTTGGCGGCTCTGATTGCTCTGATGTTGTTACGATTGTGCCCGATTCGTATCGGGTTGCGGTCGAGGACCGGGCCTCGGACTCTTACCCGGGTTTGCCCTGTTCTTACGTTTTGCATCGTGTGGATGTTTGGGTGGATGGTTTGCCGGAGGGGGAGTTTTGCACTGTGGAGGAAGAGGAGAAAGGGATTGCGGTTGAGGCTGTGACTGTTAAGAAGCATTTCTGGAAATGGGTTAGTCTTGATTCTGTGGATTTTTGAGTTCTATAGCTTTACTTTTATAATTTATGCTCATATGTTGAGTTCAATAACACATGCTGTGGACGTAGGCATGAACTATAGTCATTACATTCTATTTTATAGGAAATGATGTATGAAAATAACAAAAGAGGAACTATGTAAGTATAAAAAGCCACTCCAGTGTATAATAAGATTGGATAGACTATAATACTTAAATGGAATGACACTGTGCCCTAGTCATGGCTAGATAAATTATAGATTTTATTAGTTTGTTTTTCTAAAGAGATTCTCCCTCTGTCAAAGACCAAAATGTGCTAATGATTAGAATCCAAAGGGTCTACAAAAAGATTGGTAGACATTTTTTTTTTTTACTATCGGGTCAGCTTGTGCGCACCTCGACTAATGTCACGGGACATAATGTCTGACCCTACAATATTTGGATGTCAATGAAACTCGTAGGTGACCACCATAAATTGAACTCATCACCTTAAATACCTCAAGATCTCCTTTGATCACTTGAGTCACTCCGTGATGGTTCTATATGACAATTGAATACTATGGACGTTAGGATGGAAGGATTGCATGAGCTTGAGTTCTTAAATGGAATGTAGTGCTGGTTGAACTATGGCGCTTATTACATTCTATATATATACTTTATGTCGGTTGAGCTATGGTGTTGATGCCTTTATGTCTTATATATTGTTTCATTATCTTTTTGAGTTGGAAGTTTAACTAATATACTTTCTGTCTTTATGTGTTGAGTTCAACAACAATTGGTGTGAAGTTTTATTTTTGATATGTAACTATTCGAGCCAATTTACACATATTTCGTCTATTGTTACGAATTCATGGGACATGCCACGTAACTCTATAATATTTTTATGTCAAGGAAATTTGTAAGAAATTAATTC
Coding sequence (CDS)
ATGTCCAAATCCCCCAACCCCTTTCCCTCTCCTGAATCCCTCGCCGAATGGCTCCAACCCCGCCTCCCCTCCGATTCATTTTCTTCATGGGGCGTAAACCCCGCCACCAAAAACGTCCACAATCTCTGGATCGAGCTCTCCCAAGGGGAAATTTCCCTCTCCGATTCAACCCCACCGATCCGCACCCTCCAAGTCCTTTCCCTTCGAATCCTCGACCCCAACCGAACCCGGGTTCTCCTCGAATCCCACCAGCAGCTCTCCGACGGCTCGACCCGGTCTCGAAATCGACCCTTGTCCGAGAAAATGAAGCCCCACGAAACCCTTGAATCCGCCGTCTACCGGGCTGTCCAAGAAGAGCTCGGTTCGGTTCTTGGCGGCTCTGATTGCTCTGATGTTGTTACGATTGTGCCCGATTCGTATCGGGTTGCGGTCGAGGACCGGGCCTCGGACTCTTACCCGGGTTTGCCCTGTTCTTACGTTTTGCATCGTGTGGATGTTTGGGTGGATGGTTTGCCGGAGGGGGAGTTTTGCACTGTGGAGGAAGAGGAGAAAGGGATTGCGGTTGAGGCTGTGACTGTTAAGAAGCATTTCTGGAAATGGGTTAGTCTTGATTCTGTGGATTTTTGA
Protein sequence
MSKSPNPFPSPESLAEWLQPRLPSDSFSSWGVNPATKNVHNLWIELSQGEISLSDSTPPIRTLQVLSLRILDPNRTRVLLESHQQLSDGSTRSRNRPLSEKMKPHETLESAVYRAVQEELGSVLGGSDCSDVVTIVPDSYRVAVEDRASDSYPGLPCSYVLHRVDVWVDGLPEGEFCTVEEEEKGIAVEAVTVKKHFWKWVSLDSVDF
Homology
BLAST of Sed0025728 vs. NCBI nr
Match:
XP_022974352.1 (uncharacterized protein LOC111472979 [Cucurbita maxima])
HSP 1 Score: 312.8 bits (800), Expect = 2.3e-81
Identity = 152/209 (72.73%), Postives = 181/209 (86.60%), Query Frame = 0
Query: 6 NPFPSPESLAEWLQPRLPSDSFSSWGVNPATKNVHNLWIELSQGEISLSDSTPPIRTLQV 65
+PF SP+SL++WL+PRLPSDSF+SWGV P TKNVHNLW+ELS+GE SL+DSTPPIRT+QV
Sbjct: 86 HPFASPQSLSDWLKPRLPSDSFASWGVKPGTKNVHNLWLELSEGETSLADSTPPIRTVQV 145
Query: 66 LSLRILDPNRTRVLLESHQQLSDGSTRSRNRPLSEKMKPHETLESAVYRAVQEELGSVLG 125
LSLRI+D N R+LLESHQQLSDG+ R+RNRPLSEKMKP+ET ESAVYRAV+EELGS+LG
Sbjct: 146 LSLRIID-NHRRILLESHQQLSDGTLRNRNRPLSEKMKPNETPESAVYRAVKEELGSILG 205
Query: 126 GSDCSDVVTIVPDSYRVAVEDRASDSYPGLPCSYVLHRVDVWVDGLPEGEFCTVEE---- 185
SDCS++V IVPDSY++ +E+R S SYPGLP YVLH +DV V+GLP+ +FCTVEE
Sbjct: 206 DSDCSEIVKIVPDSYKMKIEERNSASYPGLPACYVLHSMDVLVEGLPKEDFCTVEEEEYA 265
Query: 186 --EEKGIAVEAVTVKKHFWKWVSLDSVDF 209
EE IA EAV+VKKHFWKWVSLDS+DF
Sbjct: 266 NSEESSIADEAVSVKKHFWKWVSLDSLDF 293
BLAST of Sed0025728 vs. NCBI nr
Match:
KAG6579291.1 (hypothetical protein SDJN03_23739, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 310.5 bits (794), Expect = 1.1e-80
Identity = 151/209 (72.25%), Postives = 180/209 (86.12%), Query Frame = 0
Query: 6 NPFPSPESLAEWLQPRLPSDSFSSWGVNPATKNVHNLWIELSQGEISLSDSTPPIRTLQV 65
+PF SP+SL++WL+PRLPSDSF+SWGV P TKNVHNLW+ELS+GE SL+DS PPIRT+QV
Sbjct: 120 HPFTSPQSLSDWLKPRLPSDSFASWGVKPGTKNVHNLWLELSEGETSLADSNPPIRTVQV 179
Query: 66 LSLRILDPNRTRVLLESHQQLSDGSTRSRNRPLSEKMKPHETLESAVYRAVQEELGSVLG 125
LSLRI+D N R+LLESHQQLSDG+ R+RNRPLSEKMKP+ET ESAVYRAV+EELGS+LG
Sbjct: 180 LSLRIID-NHRRILLESHQQLSDGTLRNRNRPLSEKMKPNETPESAVYRAVKEELGSILG 239
Query: 126 GSDCSDVVTIVPDSYRVAVEDRASDSYPGLPCSYVLHRVDVWVDGLPEGEFCTVEE---- 185
SDCS++V IVPDSY++ +E+R S SYPGLP YVLH +DV V+GLP+ +FCTVEE
Sbjct: 240 DSDCSEIVKIVPDSYKMKIEERNSASYPGLPACYVLHSMDVLVEGLPKEDFCTVEEEEYV 299
Query: 186 --EEKGIAVEAVTVKKHFWKWVSLDSVDF 209
EE IA EAV+VKKHFWKWVSLDS+DF
Sbjct: 300 NSEETSIADEAVSVKKHFWKWVSLDSLDF 327
BLAST of Sed0025728 vs. NCBI nr
Match:
XP_022922297.1 (uncharacterized protein LOC111430319 [Cucurbita moschata] >KAG7025097.1 hypothetical protein SDJN02_13920, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 310.5 bits (794), Expect = 1.1e-80
Identity = 151/209 (72.25%), Postives = 180/209 (86.12%), Query Frame = 0
Query: 6 NPFPSPESLAEWLQPRLPSDSFSSWGVNPATKNVHNLWIELSQGEISLSDSTPPIRTLQV 65
+PF SP+SL++WL+PRLPSDSF+SWGV P TKNVHNLW+ELS+GE SL+DS PPIRT+QV
Sbjct: 86 HPFTSPQSLSDWLKPRLPSDSFASWGVKPGTKNVHNLWLELSEGETSLADSNPPIRTVQV 145
Query: 66 LSLRILDPNRTRVLLESHQQLSDGSTRSRNRPLSEKMKPHETLESAVYRAVQEELGSVLG 125
LSLRI+D N R+LLESHQQLSDG+ R+RNRPLSEKMKP+ET ESAVYRAV+EELGS+LG
Sbjct: 146 LSLRIID-NHRRILLESHQQLSDGTLRNRNRPLSEKMKPNETPESAVYRAVKEELGSILG 205
Query: 126 GSDCSDVVTIVPDSYRVAVEDRASDSYPGLPCSYVLHRVDVWVDGLPEGEFCTVEE---- 185
SDCS++V IVPDSY++ +E+R S SYPGLP YVLH +DV V+GLP+ +FCTVEE
Sbjct: 206 DSDCSEIVKIVPDSYKMKIEERNSASYPGLPACYVLHSMDVLVEGLPKEDFCTVEEEEYV 265
Query: 186 --EEKGIAVEAVTVKKHFWKWVSLDSVDF 209
EE IA EAV+VKKHFWKWVSLDS+DF
Sbjct: 266 NSEETSIADEAVSVKKHFWKWVSLDSLDF 293
BLAST of Sed0025728 vs. NCBI nr
Match:
XP_023550799.1 (uncharacterized protein LOC111808831 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 310.1 bits (793), Expect = 1.5e-80
Identity = 151/209 (72.25%), Postives = 180/209 (86.12%), Query Frame = 0
Query: 6 NPFPSPESLAEWLQPRLPSDSFSSWGVNPATKNVHNLWIELSQGEISLSDSTPPIRTLQV 65
+PF SP+SL++WL+PRLPSDSF+SWGV P TKNVHNLW+ELS+GE SL+DS PPIRT+QV
Sbjct: 86 HPFTSPQSLSDWLKPRLPSDSFASWGVKPGTKNVHNLWLELSEGETSLADSNPPIRTVQV 145
Query: 66 LSLRILDPNRTRVLLESHQQLSDGSTRSRNRPLSEKMKPHETLESAVYRAVQEELGSVLG 125
LSLRI+D N R+LLESHQQLSDG+ R+RNRPLSEKMKP+ET ESAVYRAV+EELGS+LG
Sbjct: 146 LSLRIID-NHRRILLESHQQLSDGTLRNRNRPLSEKMKPNETPESAVYRAVKEELGSILG 205
Query: 126 GSDCSDVVTIVPDSYRVAVEDRASDSYPGLPCSYVLHRVDVWVDGLPEGEFCTVEE---- 185
SDCS++V IVPDSY++ +E+R S SYPGLP YVLH +DV V+GLP+ +FCTVEE
Sbjct: 206 DSDCSEIVKIVPDSYKMKIEERNSASYPGLPACYVLHSMDVVVEGLPKEDFCTVEEEEYV 265
Query: 186 --EEKGIAVEAVTVKKHFWKWVSLDSVDF 209
EE IA EAV+VKKHFWKWVSLDS+DF
Sbjct: 266 NSEETSIADEAVSVKKHFWKWVSLDSLDF 293
BLAST of Sed0025728 vs. NCBI nr
Match:
XP_038874473.1 (uncharacterized protein LOC120067121 isoform X2 [Benincasa hispida])
HSP 1 Score: 307.8 bits (787), Expect = 7.3e-80
Identity = 150/200 (75.00%), Postives = 173/200 (86.50%), Query Frame = 0
Query: 8 FPSPESLAEWLQPRLPSDSFSSWGVNPATKNVHNLWIELSQGEISLSDSTPPIRTLQVLS 67
F SP+SL+EWL+PRLPSDSF+SWGVNP TKNVHNLW+E+SQGE SL+DS PPIRTL VLS
Sbjct: 86 FTSPQSLSEWLKPRLPSDSFASWGVNPGTKNVHNLWLEISQGETSLADSNPPIRTLHVLS 145
Query: 68 LRILDPNRTRVLLESHQQLSDGSTRSRNRPLSEKMKPHETLESAVYRAVQEELGSVLGGS 127
LRILD N RVL+ESHQQLSDG+ R+RNRPLSEKMKP+ET ESAVYRAV+EELGS++G S
Sbjct: 146 LRILD-NHHRVLVESHQQLSDGTLRNRNRPLSEKMKPNETPESAVYRAVKEELGSIIGDS 205
Query: 128 DCSDVVTIVPDSYRVAVEDRASDSYPGLPCSYVLHRVDVWVDGLPEGEFCTVEEEEKG-- 187
DCS +V IVPDSY++ +E+R S SYPGLP YVLH +DVWV+GLPEGEFCTVEEEE G
Sbjct: 206 DCSQIVRIVPDSYKMKIEERNSVSYPGLPACYVLHSMDVWVEGLPEGEFCTVEEEEYGNS 265
Query: 188 ----IAVEAVTVKKHFWKWV 202
IA +AV+VKKHFWKWV
Sbjct: 266 EETSIADQAVSVKKHFWKWV 284
BLAST of Sed0025728 vs. ExPASy TrEMBL
Match:
A0A6J1IA21 (uncharacterized protein LOC111472979 OS=Cucurbita maxima OX=3661 GN=LOC111472979 PE=4 SV=1)
HSP 1 Score: 312.8 bits (800), Expect = 1.1e-81
Identity = 152/209 (72.73%), Postives = 181/209 (86.60%), Query Frame = 0
Query: 6 NPFPSPESLAEWLQPRLPSDSFSSWGVNPATKNVHNLWIELSQGEISLSDSTPPIRTLQV 65
+PF SP+SL++WL+PRLPSDSF+SWGV P TKNVHNLW+ELS+GE SL+DSTPPIRT+QV
Sbjct: 86 HPFASPQSLSDWLKPRLPSDSFASWGVKPGTKNVHNLWLELSEGETSLADSTPPIRTVQV 145
Query: 66 LSLRILDPNRTRVLLESHQQLSDGSTRSRNRPLSEKMKPHETLESAVYRAVQEELGSVLG 125
LSLRI+D N R+LLESHQQLSDG+ R+RNRPLSEKMKP+ET ESAVYRAV+EELGS+LG
Sbjct: 146 LSLRIID-NHRRILLESHQQLSDGTLRNRNRPLSEKMKPNETPESAVYRAVKEELGSILG 205
Query: 126 GSDCSDVVTIVPDSYRVAVEDRASDSYPGLPCSYVLHRVDVWVDGLPEGEFCTVEE---- 185
SDCS++V IVPDSY++ +E+R S SYPGLP YVLH +DV V+GLP+ +FCTVEE
Sbjct: 206 DSDCSEIVKIVPDSYKMKIEERNSASYPGLPACYVLHSMDVLVEGLPKEDFCTVEEEEYA 265
Query: 186 --EEKGIAVEAVTVKKHFWKWVSLDSVDF 209
EE IA EAV+VKKHFWKWVSLDS+DF
Sbjct: 266 NSEESSIADEAVSVKKHFWKWVSLDSLDF 293
BLAST of Sed0025728 vs. ExPASy TrEMBL
Match:
A0A6J1E2U8 (uncharacterized protein LOC111430319 OS=Cucurbita moschata OX=3662 GN=LOC111430319 PE=4 SV=1)
HSP 1 Score: 310.5 bits (794), Expect = 5.5e-81
Identity = 151/209 (72.25%), Postives = 180/209 (86.12%), Query Frame = 0
Query: 6 NPFPSPESLAEWLQPRLPSDSFSSWGVNPATKNVHNLWIELSQGEISLSDSTPPIRTLQV 65
+PF SP+SL++WL+PRLPSDSF+SWGV P TKNVHNLW+ELS+GE SL+DS PPIRT+QV
Sbjct: 86 HPFTSPQSLSDWLKPRLPSDSFASWGVKPGTKNVHNLWLELSEGETSLADSNPPIRTVQV 145
Query: 66 LSLRILDPNRTRVLLESHQQLSDGSTRSRNRPLSEKMKPHETLESAVYRAVQEELGSVLG 125
LSLRI+D N R+LLESHQQLSDG+ R+RNRPLSEKMKP+ET ESAVYRAV+EELGS+LG
Sbjct: 146 LSLRIID-NHRRILLESHQQLSDGTLRNRNRPLSEKMKPNETPESAVYRAVKEELGSILG 205
Query: 126 GSDCSDVVTIVPDSYRVAVEDRASDSYPGLPCSYVLHRVDVWVDGLPEGEFCTVEE---- 185
SDCS++V IVPDSY++ +E+R S SYPGLP YVLH +DV V+GLP+ +FCTVEE
Sbjct: 206 DSDCSEIVKIVPDSYKMKIEERNSASYPGLPACYVLHSMDVLVEGLPKEDFCTVEEEEYV 265
Query: 186 --EEKGIAVEAVTVKKHFWKWVSLDSVDF 209
EE IA EAV+VKKHFWKWVSLDS+DF
Sbjct: 266 NSEETSIADEAVSVKKHFWKWVSLDSLDF 293
BLAST of Sed0025728 vs. ExPASy TrEMBL
Match:
A0A0A0KJQ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139030 PE=4 SV=1)
HSP 1 Score: 302.8 bits (774), Expect = 1.1e-78
Identity = 151/207 (72.95%), Postives = 174/207 (84.06%), Query Frame = 0
Query: 8 FPSPESLAEWLQPRLPSDSFSSWGVNPATKNVHNLWIELSQGEISLSDSTPPIRTLQVLS 67
F SP+SL+EWLQPRLPS SF+SWGV P TKN+HNLW+E+SQGE SL+DS PPIRTL VLS
Sbjct: 89 FTSPQSLSEWLQPRLPSHSFASWGVIPGTKNLHNLWLEISQGETSLADSNPPIRTLHVLS 148
Query: 68 LRILDPNRTRVLLESHQQLSDGSTRSRNRPLSEKMKPHETLESAVYRAVQEELGSVLGGS 127
LRI+D N R+LLESHQQLSDG+ R+RNRPLSEKMKP+ET ESAVYRAVQEELGS+LG S
Sbjct: 149 LRIID-NHHRLLLESHQQLSDGTLRNRNRPLSEKMKPNETPESAVYRAVQEELGSILGDS 208
Query: 128 DCSDVVTIVPDSYRVAVEDRASDSYPGLPCSYVLHRVDVWVDGLPEGEFCTVEEEE---- 187
D S +V IVPDSYR+ +E+R S SYPGL SYVLH +DVWV+GLP+G+FCTVEEEE
Sbjct: 209 DYSQLVRIVPDSYRLKIEERDSVSYPGLSASYVLHSMDVWVEGLPDGDFCTVEEEEYVNS 268
Query: 188 --KGIAVEAVTVKKHFWKWVSLDSVDF 209
IA AV+VKKHFWKWVS +SVDF
Sbjct: 269 EDTNIADHAVSVKKHFWKWVSPESVDF 294
BLAST of Sed0025728 vs. ExPASy TrEMBL
Match:
A0A1S3AUP2 (uncharacterized protein LOC103483001 OS=Cucumis melo OX=3656 GN=LOC103483001 PE=4 SV=1)
HSP 1 Score: 293.5 bits (750), Expect = 6.9e-76
Identity = 145/206 (70.39%), Postives = 172/206 (83.50%), Query Frame = 0
Query: 8 FPSPESLAEWLQPRLPSDSFSSWGVNPATKNVHNLWIELSQGEISLSDSTPPIRTLQVLS 67
F SP+SL+EWLQPRLPS SF+SWGV P TKN+HNLW+E+SQGE SL+DS PPIR L VLS
Sbjct: 90 FTSPQSLSEWLQPRLPSHSFASWGVIPGTKNLHNLWLEISQGETSLADSNPPIRILHVLS 149
Query: 68 LRILDPNRTRVLLESHQQLSDGSTRSRNRPLSEKMKPHETLESAVYRAVQEELGSVLGGS 127
LRI+D N R+LLESHQQLSDG+ R+RNRPLSEKMKP+ET ESAVYRAVQEELGS+L S
Sbjct: 150 LRIID-NHHRLLLESHQQLSDGTLRNRNRPLSEKMKPNETPESAVYRAVQEELGSILADS 209
Query: 128 DCSDVVTIVPDSYRVAVEDRASDSYPGLPCSYVLHRVDVWVDGLPEGEFCTVEE------ 187
DCS +V IVPDSY++ +E+R S SYPGLP YVLH +D+ V+GLP+G+FCTVE+
Sbjct: 210 DCSPLVRIVPDSYKLKIEERDSVSYPGLPACYVLHSMDIRVEGLPDGDFCTVEKEEYVNS 269
Query: 188 EEKGIAVEAVTVKKHFWKWVSLDSVD 208
EE IA +AV+VKKHFWKWVS +SVD
Sbjct: 270 EETNIADQAVSVKKHFWKWVSPESVD 294
BLAST of Sed0025728 vs. ExPASy TrEMBL
Match:
A0A6J1CCN3 (uncharacterized protein LOC111009508 OS=Momordica charantia OX=3673 GN=LOC111009508 PE=4 SV=1)
HSP 1 Score: 293.1 bits (749), Expect = 9.0e-76
Identity = 142/207 (68.60%), Postives = 172/207 (83.09%), Query Frame = 0
Query: 8 FPSPESLAEWLQPRLPSDSFSSWGVNPATKNVHNLWIELSQGEISLSDSTPPIRTLQVLS 67
F SP+SL++WL PRLPSDSF+SWGV P TKNVHNLW+E+S+GE SL+DS PPIRT+QV+S
Sbjct: 88 FASPQSLSDWLGPRLPSDSFASWGVKPGTKNVHNLWLEISEGETSLADSNPPIRTVQVVS 147
Query: 68 LRILDPNRTRVLLESHQQLSDGSTRSRNRPLSEKMKPHETLESAVYRAVQEELGSVLGGS 127
LRILD RVL+ESHQ+LSDG+ R+RNRPLSEKMKP+ET ESAVYRAV+EELGS++G
Sbjct: 148 LRILD-KHNRVLVESHQELSDGTLRNRNRPLSEKMKPNETPESAVYRAVKEELGSIIGDL 207
Query: 128 DCSDVVTIVPDSYRVAVEDRASDSYPGLPCSYVLHRVDVWVDGLPEGEFCTVEEEEKGIA 187
DC ++V IVP+SY++ +E+R S SYPGLP YVLH +DVWV+GLP+ EFCTVEEEE +
Sbjct: 208 DCCEIVRIVPNSYKMKIEERNSVSYPGLPACYVLHSMDVWVEGLPDEEFCTVEEEEYEKS 267
Query: 188 VE-------AVTVKKHFWKWVSLDSVD 208
E AV+VKKHFWKWVS DSVD
Sbjct: 268 EETEIAHKAAVSVKKHFWKWVSADSVD 293
BLAST of Sed0025728 vs. TAIR 10
Match:
AT5G24460.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )
HSP 1 Score: 236.1 bits (601), Expect = 2.5e-62
Identity = 119/223 (53.36%), Postives = 159/223 (71.30%), Query Frame = 0
Query: 3 KSPNP------FPSPESLAEWLQPRLPSDSFSSWGVNPATKNVHNLWIELSQGEISLSDS 62
+SP P F +P+SL++WL+ RLPSDSF++WGV P TKNVHNLW+ELS GE SL+DS
Sbjct: 77 RSPPPPPPTQRFANPQSLSDWLESRLPSDSFAAWGVKPGTKNVHNLWLELSDGETSLADS 136
Query: 63 TPPIRTLQVLSLRILDPNRTRVLLESHQQLSDGSTRSRNRPLSEKMKPHETLESAVYRAV 122
TPP+RT+ V+++R++ N R+L+E+HQ+LSDGS R R RPLSEKMKP E+ + AV+RA+
Sbjct: 137 TPPVRTVNVVTVRVIGKN-GRILVEAHQELSDGSIRERFRPLSEKMKPEESPDEAVFRAI 196
Query: 123 QEELGSVLG--GSDCSDVVTIVPDSYRVAVEDRASDSYPGLPCSYVLHRVDVWVDGLPEG 182
+EELGS+ G + + I+P +Y VE+R S SYPGLP Y LH V+ V+GLPE
Sbjct: 197 KEELGSIFNGDGDNIGQRIKILPGTYNRRVEERNSLSYPGLPARYALHSVNATVEGLPEQ 256
Query: 183 EFCTVEEEEKG-----------IAVEAVTVKKHFWKWVSLDSV 207
+FCT E+E +G A AVTVK+H+WKWVS DS+
Sbjct: 257 DFCTEEKEYEGGDSTKDSVETLAAGNAVTVKRHYWKWVSPDSI 298
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022974352.1 | 2.3e-81 | 72.73 | uncharacterized protein LOC111472979 [Cucurbita maxima] | [more] |
KAG6579291.1 | 1.1e-80 | 72.25 | hypothetical protein SDJN03_23739, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022922297.1 | 1.1e-80 | 72.25 | uncharacterized protein LOC111430319 [Cucurbita moschata] >KAG7025097.1 hypothet... | [more] |
XP_023550799.1 | 1.5e-80 | 72.25 | uncharacterized protein LOC111808831 [Cucurbita pepo subsp. pepo] | [more] |
XP_038874473.1 | 7.3e-80 | 75.00 | uncharacterized protein LOC120067121 isoform X2 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1IA21 | 1.1e-81 | 72.73 | uncharacterized protein LOC111472979 OS=Cucurbita maxima OX=3661 GN=LOC111472979... | [more] |
A0A6J1E2U8 | 5.5e-81 | 72.25 | uncharacterized protein LOC111430319 OS=Cucurbita moschata OX=3662 GN=LOC1114303... | [more] |
A0A0A0KJQ6 | 1.1e-78 | 72.95 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139030 PE=4 SV=1 | [more] |
A0A1S3AUP2 | 6.9e-76 | 70.39 | uncharacterized protein LOC103483001 OS=Cucumis melo OX=3656 GN=LOC103483001 PE=... | [more] |
A0A6J1CCN3 | 9.0e-76 | 68.60 | uncharacterized protein LOC111009508 OS=Momordica charantia OX=3673 GN=LOC111009... | [more] |
Match Name | E-value | Identity | Description | |
AT5G24460.1 | 2.5e-62 | 53.36 | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall;... | [more] |