Sed0025680 (gene) Chayote v1

Overview


Name	Sed0025680
Type	gene
Organism	Sechium edule (Chayote v1)
Description	ran-binding protein 1 homolog a-like
Location	LG13: 20042351 .. 20044970 (+)
RNA-Seq Expression	Sed0025680
Synteny	Sed0025680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTCATTCTGTATAAAAAAAAAACCCTAATCTCTTCTCCCACCAAAATCCGATCCATTACTGTAAAAACCTCAAATCTTCATCAATGGCGAGCACAGATCCCGAACGCAGAGACGAAGAAGATGCTCCTGCCGGAGAGGATGAAGACACCGGAGCTCAAGTCGCTCCGATCGTCAAGTTGGAGGCGGTCGCCGTCACCACCGGCGAAGAAAACGAGGACGCCATCCTCGATCTGTACGTATTCCTCTGCCTCTTGTTTTTCTATCTCAATCTAGGTTTTGATTCATGAATGTGATTTGCTTTTTCAGTAAGGCGAAACTGTACCGATTTGATAAAGATGGAAATCAATGGAAGGAGAGGGGTGCTGGTACTGTTAAGCTTTTGAAACATAAGGAGTCTGGCAAGGTTCGCCTTGTTATGAGACAGTCTAAGACGCTTAAGATCTGCGCTAATCATCTTGGTCTGTTCTCGATTATTTAGGTTTTGTGAATACGATTGAGTTTCTTTTGAGTTGTGGAATTTATTCTTTGATTTTTGTGGTTTTTGTAGTGGTTTCTTCAATGTCCGTTCAAGAACATGCTGGAAATGAAAAATCGTGCGTTTGGCATGCGGCTGATTTTGCTGATGGCGAATTGAAAGATGAACTTTTCTGCATCAGATTCCCATCTATTGAGAGTGAGTACAATTTTGTTGCTCTTTTTCCCTGAAATTTGGCTGTATGTTAGAATGGGTGTTGTGTTCTTTGATCCTTTTGATCTATGATAGCAGGGTAACATCAGATATTGTATCGTTTGGCATGTAGTTGTAACATCTAAGACCCCGTTTGATAACTATTTGGTTTTTTGTTTTTAATTTTTGAAATTTAAGCCTACAACAACTATCTTATACTTGAATATCTACCTCTCACCTACATTTGTAGAAACCAAACCAAAATTGAAACAAAAACAAGTGCTTCCAAAAGTTGCTTAGTGTTCACCTACTTAAGGAAAGGTAGATATATTGTAGGAAGGGTAGAACAAATTATAGGAAATTTGAGTGAGAATAAGCTTAAATTTCAAAATCAAAAAATAAAAAATAAAAAATAAAATGATTATCAAAAGGGTCTAAATAACTCATTTGTTTGTATTCTGCCTGTTCACTAAACTATTAATCAACTTGAATATTGTATTTGTTGTTTCTCATAATTGTTTGAAGTTGTAGTTTTCCTGTCTTGTTTTATACTTGAACATTGTACGTATGAAGTGTGGAGACGGGCGTGGTTACCTTGTTTCAAAATAAGTTAGGGGACATAACCCTTCTTTTCTATTGCCTAGCTCTTAAACCTATTTTATTATATTTAGAGACAATTTGCACAATTACATTTATAGATTTAAATGCTTAACGCTACGTGTGTTCTTTATTCAATTTCTAATTTCTAGGTAGAAAATACCTATATATTTTCTATTGCCTAGCTCTTAAACCTATCTTTTATGACCTTTTCTTTTCTCTTTAAGTTATTTGTCAATCATTTTTACCTCTTCTCTGAACTTCTAGATTCATTTAGTCCCAAATTTTCTGGTCTTGGCACTCATTTGATCATTTCTCGATAATTGCAACTGTTTATTTCTCCCAAACTGTTTGCGGTGCATCATGGAGCGTATCTAGGTTCTAAAAATGTAAATCATTCATGCACTTGTGTGACACTGCTGAACTCCAAGAATTTCAAAGCATTGTTTAGTTAACAGTTATCGGATCATGGATGCTTTATTAATTATGCTAGTTGGTTTATTCTCTTTGCATCAGACTGCAAATCATTCATGGAAACATTCCAAGAGGTCGCCGAGTCCCAACAGAAGAAAGAGGACAACGAAGATGCATCTGCAGCAGCTGGATTGCTTGAGAATTTGAGTGTCGAAGAAAAGAAAGCTGAAGAAGATATAGCCGGAGACACACCTGCCAAAGCTAAGGAAGTTGATGACCCTAAGGGGGAGCCAGAAAAATCAGATGCCGAGAAGAAAAGCGATGAGTAGCCCGATTTTCTGCTACTGAATACATCCAAGTTTTTGATGAGGTTGACCTCTCTTCCATCCATGTCTTGGTTTGGCACATTTAAACATAGTCAGTTATTAGTTTGAGTTTCTTCTTGGTTGGAAGAGAGTGGAGTCGTTTGAAGTCGTACTTCGGTTGGAGTCCCTTTCGATATTTTTTCGTCCTTTCAAAATGAGATTTCTCTCTAGTCACGGTCGTCGTCAAATGGGGGTGGGTGGGTCGTGTGGCGTCTTGCAGTTTATGAATCTCGAAAGCTCTTGAATTCGGGGTACAATTGAGTTCATGTGCAGGGCCTGAGCTATAAAGATGCTGCTGCAAGGGGTTGGTATTCAAAACAATAGTAATTTGCAGAAGAAACCATTTATTTTTGCTTGTTTTGCTCAGTGCCGGAGTTTTTTACTTTCCGGATGGTGAAAATTATGGTCTTGTTTATGGTATTTTTAATTTTTAGGTTTTGCTCTTTTGTTGTGCAATGTGTTTATTTATAGTGTTTATTCTTATCTCTTGTTAAAAGATTAATTATTTATGATTTTGAGACCTTAACAAAATATTTGAATAGACCACCCCAGTTGTTGGTCTAATGATTGGATAA

mRNA sequence

TTCTCATTCTGTATAAAAAAAAAACCCTAATCTCTTCTCCCACCAAAATCCGATCCATTACTGTAAAAACCTCAAATCTTCATCAATGGCGAGCACAGATCCCGAACGCAGAGACGAAGAAGATGCTCCTGCCGGAGAGGATGAAGACACCGGAGCTCAAGTCGCTCCGATCGTCAAGTTGGAGGCGGTCGCCGTCACCACCGGCGAAGAAAACGAGGACGCCATCCTCGATCTTAAGGCGAAACTGTACCGATTTGATAAAGATGGAAATCAATGGAAGGAGAGGGGTGCTGGTACTGTTAAGCTTTTGAAACATAAGGAGTCTGGCAAGGTTCGCCTTGTTATGAGACAGTCTAAGACGCTTAAGATCTGCGCTAATCATCTTGTGGTTTCTTCAATGTCCGTTCAAGAACATGCTGGAAATGAAAAATCGTGCGTTTGGCATGCGGCTGATTTTGCTGATGGCGAATTGAAAGATGAACTTTTCTGCATCAGATTCCCATCTATTGAGAACTGCAAATCATTCATGGAAACATTCCAAGAGGTCGCCGAGTCCCAACAGAAGAAAGAGGACAACGAAGATGCATCTGCAGCAGCTGGATTGCTTGAGAATTTGAGTGTCGAAGAAAAGAAAGCTGAAGAAGATATAGCCGGAGACACACCTGCCAAAGCTAAGGAAGTTGATGACCCTAAGGGGGAGCCAGAAAAATCAGATGCCGAGAAGAAAAGCGATGAGTAGCCCGATTTTCTGCTACTGAATACATCCAAGTTTTTGATGAGGTTGACCTCTCTTCCATCCATGTCTTGGTTTGGCACATTTAAACATAGTCAGTTATTAGTTTGAGTTTCTTCTTGGTTGGAAGAGAGTGGAGTCGTTTGAAGTCGTACTTCGGTTGGAGTCCCTTTCGATATTTTTTCGTCCTTTCAAAATGAGATTTCTCTCTAGTCACGGTCGTCGTCAAATGGGGGTGGGTGGGTCGTGTGGCGTCTTGCAGTTTATGAATCTCGAAAGCTCTTGAATTCGGGGTACAATTGAGTTCATGTGCAGGGCCTGAGCTATAAAGATGCTGCTGCAAGGGGTTGGTATTCAAAACAATAGTAATTTGCAGAAGAAACCATTTATTTTTGCTTGTTTTGCTCAGTGCCGGAGTTTTTTACTTTCCGGATGGTGAAAATTATGGTCTTGTTTATGGTATTTTTAATTTTTAGGTTTTGCTCTTTTGTTGTGCAATGTGTTTATTTATAGTGTTTATTCTTATCTCTTGTTAAAAGATTAATTATTTATGATTTTGAGACCTTAACAAAATATTTGAATAGACCACCCCAGTTGTTGGTCTAATGATTGGATAA

Coding sequence (CDS)

ATGGCGAGCACAGATCCCGAACGCAGAGACGAAGAAGATGCTCCTGCCGGAGAGGATGAAGACACCGGAGCTCAAGTCGCTCCGATCGTCAAGTTGGAGGCGGTCGCCGTCACCACCGGCGAAGAAAACGAGGACGCCATCCTCGATCTTAAGGCGAAACTGTACCGATTTGATAAAGATGGAAATCAATGGAAGGAGAGGGGTGCTGGTACTGTTAAGCTTTTGAAACATAAGGAGTCTGGCAAGGTTCGCCTTGTTATGAGACAGTCTAAGACGCTTAAGATCTGCGCTAATCATCTTGTGGTTTCTTCAATGTCCGTTCAAGAACATGCTGGAAATGAAAAATCGTGCGTTTGGCATGCGGCTGATTTTGCTGATGGCGAATTGAAAGATGAACTTTTCTGCATCAGATTCCCATCTATTGAGAACTGCAAATCATTCATGGAAACATTCCAAGAGGTCGCCGAGTCCCAACAGAAGAAAGAGGACAACGAAGATGCATCTGCAGCAGCTGGATTGCTTGAGAATTTGAGTGTCGAAGAAAAGAAAGCTGAAGAAGATATAGCCGGAGACACACCTGCCAAAGCTAAGGAAGTTGATGACCCTAAGGGGGAGCCAGAAAAATCAGATGCCGAGAAGAAAAGCGATGAGTAG

Protein sequence

MASTDPERRDEEDAPAGEDEDTGAQVAPIVKLEAVAVTTGEENEDAILDLKAKLYRFDKDGNQWKERGAGTVKLLKHKESGKVRLVMRQSKTLKICANHLVVSSMSVQEHAGNEKSCVWHAADFADGELKDELFCIRFPSIENCKSFMETFQEVAESQQKKEDNEDASAAAGLLENLSVEEKKAEEDIAGDTPAKAKEVDDPKGEPEKSDAEKKSDE

Homology

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BLAST of Sed0025680 vs. NCBI nr
Match: XP_022998583.1 (ran-binding protein 1 homolog a-like [Cucurbita maxima])

HSP 1 Score: 367.5 bits (942), Expect = 8.1e-98
Identity = 192/218 (88.07%), Postives = 207/218 (94.95%), Query Frame = 0


Query: 1   MASTDPERRDEEDAPAGEDEDTGAQVAPIVKLEAVAVTTGEENEDAILDLKAKLYRFDKD 60
           MASTDPERR++EDAPAG+DEDTGAQVAPIVKLE VAVTTGEE+EDAILDLKAKLYRFDKD
Sbjct: 1   MASTDPERREDEDAPAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKD 60

Query: 61  GNQWKERGAGTVKLLKHKESGKVRLVMRQSKTLKICANHLVVSSMSVQEHAGNEKSCVWH 120
           GNQWKERGAGTVK LKHK +GKVRLVMRQSKTLKICANHLV+SSM+VQEHAGNEKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKNNGKVRLVMRQSKTLKICANHLVISSMTVQEHAGNEKSCVWH 120

Query: 121 AADFADGELKDELFCIRFPSIENCKSFMETFQEVAESQQKKEDNEDASAAAGLLENLSVE 180
           AADFADGELK+ELFCIRFPSIENCK+F ETFQE+AESQQKK++N+DASAAAGLLE LSVE
Sbjct: 121 AADFADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASAAAGLLEKLSVE 180

Query: 181 EKKAEEDIAGDTPAKAKEVDDPKGEPE-KSDAEKKSDE 218
           EKK EED AGDTPAK KE D+PKGE E KSDAEKK+DE
Sbjct: 181 EKKGEEDKAGDTPAKTKEEDEPKGEAEKKSDAEKKNDE 218

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BLAST of Sed0025680 vs. NCBI nr
Match: XP_022949353.1 (ran-binding protein 1 homolog a-like [Cucurbita moschata] >XP_023523176.1 ran-binding protein 1 homolog a-like [Cucurbita pepo subsp. pepo] >KAG6607321.1 Ran-binding protein 1-like c, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 366.3 bits (939), Expect = 1.8e-97
Identity = 191/218 (87.61%), Postives = 207/218 (94.95%), Query Frame = 0


Query: 1   MASTDPERRDEEDAPAGEDEDTGAQVAPIVKLEAVAVTTGEENEDAILDLKAKLYRFDKD 60
           MASTDPERR++EDAPAG+DEDTGAQVAPIVKLE VAVTTGEE+EDAILDLKAKLYRFDKD
Sbjct: 1   MASTDPERREDEDAPAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKD 60

Query: 61  GNQWKERGAGTVKLLKHKESGKVRLVMRQSKTLKICANHLVVSSMSVQEHAGNEKSCVWH 120
           GNQWKERGAGTVK LKHK +GKVRLVMRQSKTLKICANHLV+SSM+VQEHAGNEKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKNTGKVRLVMRQSKTLKICANHLVISSMTVQEHAGNEKSCVWH 120

Query: 121 AADFADGELKDELFCIRFPSIENCKSFMETFQEVAESQQKKEDNEDASAAAGLLENLSVE 180
           AADFADGELK+ELFCIRFPSIENCK+F ETFQE+AESQQKK++N+DASAAAGLLE LSVE
Sbjct: 121 AADFADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASAAAGLLEKLSVE 180

Query: 181 EKKAEEDIAGDTPAKAKEVDDPKGEPE-KSDAEKKSDE 218
           EKK EED AGDTPAK KE D+PKGE E K+DAEKK+DE
Sbjct: 181 EKKGEEDKAGDTPAKTKEEDEPKGEAEKKADAEKKNDE 218

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BLAST of Sed0025680 vs. NCBI nr
Match: KAG7036999.1 (Ran-binding protein 1-like c [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 360.9 bits (925), Expect = 7.6e-96
Identity = 188/215 (87.44%), Postives = 204/215 (94.88%), Query Frame = 0


Query: 4   TDPERRDEEDAPAGEDEDTGAQVAPIVKLEAVAVTTGEENEDAILDLKAKLYRFDKDGNQ 63
           TDPERR++EDAPAG+DEDTGAQVAPIVKLE VAVTTGEE+EDAILDLKAKLYRFDKDGNQ
Sbjct: 205 TDPERREDEDAPAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKDGNQ 264

Query: 64  WKERGAGTVKLLKHKESGKVRLVMRQSKTLKICANHLVVSSMSVQEHAGNEKSCVWHAAD 123
           WKERGAGTVK LKHK +GKVRLVMRQSKTLKICANHLV+SSM+VQEHAGNEKSCVWHAAD
Sbjct: 265 WKERGAGTVKFLKHKNTGKVRLVMRQSKTLKICANHLVISSMTVQEHAGNEKSCVWHAAD 324

Query: 124 FADGELKDELFCIRFPSIENCKSFMETFQEVAESQQKKEDNEDASAAAGLLENLSVEEKK 183
           FADGELK+ELFCIRFPSIENCK+F ETFQE+AESQQKK++N+DASAAAGLLE LSVEEKK
Sbjct: 325 FADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASAAAGLLEKLSVEEKK 384

Query: 184 AEEDIAGDTPAKAKEVDDPKGEPE-KSDAEKKSDE 218
            EED AGDTPAK KE D+PKGE E K+DAEKK+DE
Sbjct: 385 GEEDKAGDTPAKTKEEDEPKGEAEKKADAEKKNDE 419

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BLAST of Sed0025680 vs. NCBI nr
Match: XP_023519268.1 (ran-binding protein 1 homolog a-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 356.7 bits (914), Expect = 1.4e-94
Identity = 189/218 (86.70%), Postives = 202/218 (92.66%), Query Frame = 0


Query: 1   MASTDPERRDEEDAPAGEDEDTGAQVAPIVKLEAVAVTTGEENEDAILDLKAKLYRFDKD 60
           MAS D ERRD E+APAGEDEDTGAQVAPIVKLE V VTTGEENEDA+LDLKAKLYRFDKD
Sbjct: 1   MASADSERRDTEEAPAGEDEDTGAQVAPIVKLEEVVVTTGEENEDAVLDLKAKLYRFDKD 60

Query: 61  GNQWKERGAGTVKLLKHKESGKVRLVMRQSKTLKICANHLVVSSMSVQEHAGNEKSCVWH 120
           GNQWKERGAGTVK LKHKE+GKVRLVMRQSKTLKICANHLV+ SM+VQEHAGN+KSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWH 120

Query: 121 AADFADGELKDELFCIRFPSIENCKSFMETFQEVAESQQKKEDNEDASAAAGLLENLSVE 180
           A DFADGELKDELFCIRFPSIENCKSFMETFQE+AESQQKKE+N+DASAAAGLLE LSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKSFMETFQEIAESQQKKEENKDASAAAGLLEKLSVE 180

Query: 181 EKKAEEDIAGDTPAKAKEVDDPK-GEPEKSDAEKKSDE 218
           EKK  ED AG+TP+K KE D+PK GE EKSDAEKK+DE
Sbjct: 181 EKKG-EDKAGETPSKTKEEDEPKGGEAEKSDAEKKNDE 217

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BLAST of Sed0025680 vs. NCBI nr
Match: XP_022970594.1 (ran-binding protein 1 homolog a-like [Cucurbita maxima])

HSP 1 Score: 355.5 bits (911), Expect = 3.2e-94
Identity = 188/218 (86.24%), Postives = 202/218 (92.66%), Query Frame = 0


Query: 1   MASTDPERRDEEDAPAGEDEDTGAQVAPIVKLEAVAVTTGEENEDAILDLKAKLYRFDKD 60
           MAS D ERRD E+APAGEDEDTGAQVAPIVKLE V VTTGEENEDA+LDLKAKLYRFDKD
Sbjct: 1   MASADSERRDTEEAPAGEDEDTGAQVAPIVKLEEVVVTTGEENEDAVLDLKAKLYRFDKD 60

Query: 61  GNQWKERGAGTVKLLKHKESGKVRLVMRQSKTLKICANHLVVSSMSVQEHAGNEKSCVWH 120
           GNQWKERGAGTVK LKHKE+GKVRLVMRQSKTLKICANHLV+ SM+VQEHAGN+KSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWH 120

Query: 121 AADFADGELKDELFCIRFPSIENCKSFMETFQEVAESQQKKEDNEDASAAAGLLENLSVE 180
           A DFADGELKDELFCIRFPSIENCKSFMETFQE+AESQQKKE+N+DAS+AAGLLE LSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKSFMETFQEIAESQQKKEENKDASSAAGLLEKLSVE 180

Query: 181 EKKAEEDIAGDTPAKAKEVDDPK-GEPEKSDAEKKSDE 218
           EKK  ED AG+TP+K KE D+PK GE EKSDAEKK+DE
Sbjct: 181 EKKG-EDKAGETPSKTKEEDEPKGGEAEKSDAEKKNDE 217

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BLAST of Sed0025680 vs. ExPASy Swiss-Prot
Match: Q9LMK7 (Ran-binding protein 1 homolog a OS=Arabidopsis thaliana OX=3702 GN=RANBP1A PE=1 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 5.3e-76
Identity = 158/227 (69.60%), Postives = 182/227 (80.18%), Query Frame = 0


Query: 1   MASTDP--ERRDEEDAPAGEDEDTGAQVAPIVKLEAVAVTTGEENEDAILDLKAKLYRFD 60
           MA+ +P  E RDEE+A A EDEDTGAQVAPIV+LE VAVTTGEE+EDA+LDLK+KLYRFD
Sbjct: 1   MATNEPEHEHRDEEEAGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKLYRFD 60

Query: 61  KDGNQWKERGAGTVKLLKHKESGKVRLVMRQSKTLKICANHLVVSSMSVQEHAGNEKSCV 120
           KD NQWKERGAGTVK LKHK +GK+RLVMRQSKTLKICANH V S MSVQEH GNEKSCV
Sbjct: 61  KDANQWKERGAGTVKFLKHKNTGKIRLVMRQSKTLKICANHFVKSGMSVQEHVGNEKSCV 120

Query: 121 WHAADFADGELKDELFCIRFPSIENCKSFMETFQEVAESQQKKEDNEDASAAAGLLENLS 180
           WHA DFADGELKDELFCIRF SIENCK+FM+ F+EVAES+++KE+++DA+  AGLLE L+
Sbjct: 121 WHARDFADGELKDELFCIRFASIENCKTFMQKFKEVAESEEEKEESKDAADTAGLLEKLT 180

Query: 181 VEEKKAEEDIAGDTPAKAKEV--------DDPKGEPEKSDAEKKSDE 218
           VEE K EE     T AKA E         +  + E EKS   KK++E
Sbjct: 181 VEETKTEE----KTEAKAVETAKTEVKAEEKKESEAEKSGEAKKTEE 223

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BLAST of Sed0025680 vs. ExPASy Swiss-Prot
Match: P92985 (Ran-binding protein 1 homolog c OS=Arabidopsis thaliana OX=3702 GN=RANBP1C PE=2 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 1.2e-75
Identity = 154/218 (70.64%), Postives = 178/218 (81.65%), Query Frame = 0


Query: 1   MASTDPERRDEED-APAGEDEDTGAQVAPIVKLEAVAVTTGEENEDAILDLKAKLYRFDK 60
           MAST+PER + ED     EDEDTGAQVAPIV+LE VAVTTGEE+EDA+LDLK+K+YRFDK
Sbjct: 1   MASTEPERENREDETEVNEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKMYRFDK 60

Query: 61  DGNQWKERGAGTVKLLKHKESGKVRLVMRQSKTLKICANHLVVSSMSVQEHAGNEKSCVW 120
           +GNQWKERGAGTVKLLKHKE+GKVRLVMRQSKTLKICANHL+ S MSVQEH+GNEKSC+W
Sbjct: 61  EGNQWKERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEKSCLW 120

Query: 121 HAADFADGELKDELFCIRFPSIENCKSFMETFQEVAESQQKKEDNEDASAAAGLLENLSV 180
           HA DF+DGELKDELFCIRF SIENCK+FME F E+AESQQ  +++     AAGL+ENLSV
Sbjct: 121 HATDFSDGELKDELFCIRFASIENCKTFMEKFTEIAESQQVGKESTQGDEAAGLIENLSV 180

Query: 181 EEKKAEEDIAGDTPAKAKEVDDPKGEPEKSDAEKKSDE 218
           EE  +EE        KAKE ++   EP K D E K ++
Sbjct: 181 EENISEE--------KAKEAEEK--EPAKEDKETKKEK 208

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BLAST of Sed0025680 vs. ExPASy Swiss-Prot
Match: Q8RWG8 (Ran-binding protein 1 homolog b OS=Arabidopsis thaliana OX=3702 GN=RANBP1B PE=1 SV=2)

HSP 1 Score: 279.6 bits (714), Expect = 2.9e-74
Identity = 154/219 (70.32%), Postives = 183/219 (83.56%), Query Frame = 0


Query: 3   STDPER--RDEEDAPAGEDEDTGAQVAPIVKLEAVAVTTGEENEDAILDLKAKLYRFDKD 62
           S +PER  RDEE+  A EDEDTGAQVAPIV+LE VAVTTGEE+ED ILDLK+KLYRFDKD
Sbjct: 5   SNEPERENRDEEETGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDTILDLKSKLYRFDKD 64

Query: 63  GNQWKERGAGTVKLLKHKESGKVRLVMRQSKTLKICANHLVVSSMSVQEHAGNEKSCVWH 122
           G+QWKERGAGTVK LKH+ SGK+RLVMRQSKTLKICANHLV S MSVQEHAGN+KSCVWH
Sbjct: 65  GSQWKERGAGTVKFLKHRVSGKIRLVMRQSKTLKICANHLVGSGMSVQEHAGNDKSCVWH 124

Query: 123 AADFADGELKDELFCIRFPSIENCKSFMETFQEVAESQQKKEDNEDASAAAGLLENLSVE 182
           A DF+DGELKDELFCIRF S+ENCK+FM+ F+EVAES+++KE+++DAS  AGLLE L+VE
Sbjct: 125 ARDFSDGELKDELFCIRFASVENCKAFMQKFKEVAESEEEKEESKDASDTAGLLEKLTVE 184

Query: 183 EKKAEEDIAGDTPAKAKEVDDPKGEPEKSDA--EKKSDE 218
           EK++E+      P +  E      E +KS+A  EKK++E
Sbjct: 185 EKESEK-----KPVEKAE------ENKKSEAVEEKKTEE 212

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BLAST of Sed0025680 vs. ExPASy Swiss-Prot
Match: Q09717 (Ran-specific GTPase-activating protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sbp1 PE=1 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 3.1e-31
Identity = 74/160 (46.25%), Postives = 98/160 (61.25%), Query Frame = 0


Query: 2   ASTDPERRDEEDAPAGEDEDTGAQVAPIVKLEAVAVTTGEENEDAILDLKAKLYRFDKDG 61
           AST+ E++  E     E         PIVKL AV   T EE E     ++AKL+RFDK  
Sbjct: 51  ASTNDEKKPAEGDEDAEPASPEVHFEPIVKLSAVETKTNEEEETVEFKMRAKLFRFDKAA 110

Query: 62  NQWKERGAGTVKLLKHKESGKVRLVMRQSKTLKICANHLVVSSMSVQEHAGNEKSCVWH- 121
           ++WKERG G  +LLKHKE+GK RLVMR+ KTLK+CANHL++  M +  + G+++S VW  
Sbjct: 111 SEWKERGTGDARLLKHKETGKTRLVMRRDKTLKVCANHLLMPEMKLTPNVGSDRSWVWTV 170

Query: 122 AADFADGELKDELFCIRFPSIENCKSFMETFQEVAESQQK 161
           AAD ++GE   E F IRF + EN   F E F++  E   K
Sbjct: 171 AADVSEGEPTAETFAIRFANSENANLFKENFEKYQEENAK 210

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BLAST of Sed0025680 vs. ExPASy Swiss-Prot
Match: P34022 (Ran-specific GTPase-activating protein OS=Mus musculus OX=10090 GN=Ranbp1 PE=1 SV=2)

HSP 1 Score: 128.3 bits (321), Expect = 1.1e-28
Identity = 80/196 (40.82%), Postives = 115/196 (58.67%), Query Frame = 0


Query: 1   MASTDPERRDEEDAPAGEDEDT-GAQVAPIVKLEAVAVTTGEENEDAILDLKAKLYRF-- 60
           MA+      D + +    DE     Q  PIV L    + T EE+E+ +  ++AKL+RF  
Sbjct: 1   MAAAKDSHEDHDTSTENADESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFAS 60

Query: 61  DKDGNQWKERGAGTVKLLKHKESGKVRLVMRQSKTLKICANHLVVSSMSVQEHAGNEKSC 120
           + D  +WKERG G VKLLKHKE G +RL+MR+ KTLKICANH +   M ++ +AG++++ 
Sbjct: 61  ENDLPEWKERGTGDVKLLKHKEKGTIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAW 120

Query: 121 VWHA-ADFADGELKDELFCIRFPSIENCKSFMETFQEVAESQQKKE-----DNEDASAAA 180
           VW+  ADFAD   K EL  IRF + EN + F   F+E  +  +++E      N++A   A
Sbjct: 121 VWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKGPGKNDNAEKVA 180

Query: 181 GLLENLSVEEKKAEED 188
             LE LSV E + E +
Sbjct: 181 EKLEALSVREAREEAE 196

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BLAST of Sed0025680 vs. ExPASy TrEMBL
Match: A0A6J1KH56 (ran-binding protein 1 homolog a-like OS=Cucurbita maxima OX=3661 GN=LOC111493171 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 3.9e-98
Identity = 192/218 (88.07%), Postives = 207/218 (94.95%), Query Frame = 0


Query: 1   MASTDPERRDEEDAPAGEDEDTGAQVAPIVKLEAVAVTTGEENEDAILDLKAKLYRFDKD 60
           MASTDPERR++EDAPAG+DEDTGAQVAPIVKLE VAVTTGEE+EDAILDLKAKLYRFDKD
Sbjct: 1   MASTDPERREDEDAPAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKD 60

Query: 61  GNQWKERGAGTVKLLKHKESGKVRLVMRQSKTLKICANHLVVSSMSVQEHAGNEKSCVWH 120
           GNQWKERGAGTVK LKHK +GKVRLVMRQSKTLKICANHLV+SSM+VQEHAGNEKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKNNGKVRLVMRQSKTLKICANHLVISSMTVQEHAGNEKSCVWH 120

Query: 121 AADFADGELKDELFCIRFPSIENCKSFMETFQEVAESQQKKEDNEDASAAAGLLENLSVE 180
           AADFADGELK+ELFCIRFPSIENCK+F ETFQE+AESQQKK++N+DASAAAGLLE LSVE
Sbjct: 121 AADFADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASAAAGLLEKLSVE 180

Query: 181 EKKAEEDIAGDTPAKAKEVDDPKGEPE-KSDAEKKSDE 218
           EKK EED AGDTPAK KE D+PKGE E KSDAEKK+DE
Sbjct: 181 EKKGEEDKAGDTPAKTKEEDEPKGEAEKKSDAEKKNDE 218

[Close]

BLAST of Sed0025680 vs. ExPASy TrEMBL
Match: A0A6J1GBT0 (ran-binding protein 1 homolog a-like OS=Cucurbita moschata OX=3662 GN=LOC111452731 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 8.8e-98
Identity = 191/218 (87.61%), Postives = 207/218 (94.95%), Query Frame = 0


Query: 1   MASTDPERRDEEDAPAGEDEDTGAQVAPIVKLEAVAVTTGEENEDAILDLKAKLYRFDKD 60
           MASTDPERR++EDAPAG+DEDTGAQVAPIVKLE VAVTTGEE+EDAILDLKAKLYRFDKD
Sbjct: 1   MASTDPERREDEDAPAGDDEDTGAQVAPIVKLEEVAVTTGEEDEDAILDLKAKLYRFDKD 60

Query: 61  GNQWKERGAGTVKLLKHKESGKVRLVMRQSKTLKICANHLVVSSMSVQEHAGNEKSCVWH 120
           GNQWKERGAGTVK LKHK +GKVRLVMRQSKTLKICANHLV+SSM+VQEHAGNEKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKNTGKVRLVMRQSKTLKICANHLVISSMTVQEHAGNEKSCVWH 120

Query: 121 AADFADGELKDELFCIRFPSIENCKSFMETFQEVAESQQKKEDNEDASAAAGLLENLSVE 180
           AADFADGELK+ELFCIRFPSIENCK+F ETFQE+AESQQKK++N+DASAAAGLLE LSVE
Sbjct: 121 AADFADGELKNELFCIRFPSIENCKTFKETFQEIAESQQKKDENKDASAAAGLLEKLSVE 180

Query: 181 EKKAEEDIAGDTPAKAKEVDDPKGEPE-KSDAEKKSDE 218
           EKK EED AGDTPAK KE D+PKGE E K+DAEKK+DE
Sbjct: 181 EKKGEEDKAGDTPAKTKEEDEPKGEAEKKADAEKKNDE 218

[Close]

BLAST of Sed0025680 vs. ExPASy TrEMBL
Match: A0A6J1I618 (ran-binding protein 1 homolog a-like OS=Cucurbita maxima OX=3661 GN=LOC111469535 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.5e-94
Identity = 188/218 (86.24%), Postives = 202/218 (92.66%), Query Frame = 0


Query: 1   MASTDPERRDEEDAPAGEDEDTGAQVAPIVKLEAVAVTTGEENEDAILDLKAKLYRFDKD 60
           MAS D ERRD E+APAGEDEDTGAQVAPIVKLE V VTTGEENEDA+LDLKAKLYRFDKD
Sbjct: 1   MASADSERRDTEEAPAGEDEDTGAQVAPIVKLEEVVVTTGEENEDAVLDLKAKLYRFDKD 60

Query: 61  GNQWKERGAGTVKLLKHKESGKVRLVMRQSKTLKICANHLVVSSMSVQEHAGNEKSCVWH 120
           GNQWKERGAGTVK LKHKE+GKVRLVMRQSKTLKICANHLV+ SM+VQEHAGN+KSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWH 120

Query: 121 AADFADGELKDELFCIRFPSIENCKSFMETFQEVAESQQKKEDNEDASAAAGLLENLSVE 180
           A DFADGELKDELFCIRFPSIENCKSFMETFQE+AESQQKKE+N+DAS+AAGLLE LSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKSFMETFQEIAESQQKKEENKDASSAAGLLEKLSVE 180

Query: 181 EKKAEEDIAGDTPAKAKEVDDPK-GEPEKSDAEKKSDE 218
           EKK  ED AG+TP+K KE D+PK GE EKSDAEKK+DE
Sbjct: 181 EKKG-EDKAGETPSKTKEEDEPKGGEAEKSDAEKKNDE 217

[Close]

BLAST of Sed0025680 vs. ExPASy TrEMBL
Match: A0A6J1D9U4 (ran-binding protein 1 homolog b-like OS=Momordica charantia OX=3673 GN=LOC111018963 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.5e-94
Identity = 191/217 (88.02%), Postives = 202/217 (93.09%), Query Frame = 0


Query: 1   MASTDPERRDEEDAPAGEDEDTGAQVAPIVKLEAVAVTTGEENEDAILDLKAKLYRFDKD 60
           MASTD ERR+EE+AP GEDEDTGAQVAPIVKLEAVAVTTGEE+EDAILDLK+KLYRFDKD
Sbjct: 1   MASTDTERREEEEAPVGEDEDTGAQVAPIVKLEAVAVTTGEEDEDAILDLKSKLYRFDKD 60

Query: 61  GNQWKERGAGTVKLLKHKESGKVRLVMRQSKTLKICANHLVVSSMSVQEHAGNEKSCVWH 120
           GNQWKERGAGTVK LKHKESGKVRLVMRQSKTLKICANHLV+SSMSVQEHAGNEKSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKESGKVRLVMRQSKTLKICANHLVLSSMSVQEHAGNEKSCVWH 120

Query: 121 AADFADGELKDELFCIRFPSIENCKSFMETFQEVAESQQKKEDNEDASAAAGLLENLSV- 180
           A DFADGELKDELFCIRFPSIENCK+FMETFQEVAESQ KKE+N+DASAAAGLLE LSV 
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKTFMETFQEVAESQMKKEENKDASAAAGLLEKLSVE 180

Query: 181 EEKKAE---EDIAGDTPAKAKEVDDPKGEPEKSDAEK 214
           EEKKAE   ED + DTPAK+KE D P+GEP KSDAEK
Sbjct: 181 EEKKAEDKSEDKSEDTPAKSKEEDTPEGEPGKSDAEK 217

[Close]

BLAST of Sed0025680 vs. ExPASy TrEMBL
Match: A0A0A0LV78 (RanBD1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G532330 PE=4 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 4.5e-94
Identity = 185/217 (85.25%), Postives = 202/217 (93.09%), Query Frame = 0


Query: 1   MASTDPERRDEEDAPAGEDEDTGAQVAPIVKLEAVAVTTGEENEDAILDLKAKLYRFDKD 60
           MASTD ERRD+E+APAGEDEDTGAQVAPIVKLEAV VTTGEE+ED +LDLKAKLYRFDKD
Sbjct: 1   MASTDSERRDDEEAPAGEDEDTGAQVAPIVKLEAVDVTTGEEDEDTVLDLKAKLYRFDKD 60

Query: 61  GNQWKERGAGTVKLLKHKESGKVRLVMRQSKTLKICANHLVVSSMSVQEHAGNEKSCVWH 120
           GNQWKERGAGTVK LKHK++GKVRLVMRQSKTLKICANHLV+ SM+VQEHAGN+KSCVWH
Sbjct: 61  GNQWKERGAGTVKFLKHKQTGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWH 120

Query: 121 AADFADGELKDELFCIRFPSIENCKSFMETFQEVAESQQKKEDNEDASAAAGLLENLSVE 180
           A DFADGELKDELFCIRFPSIENCKSFMETFQE+AESQQKK +N+DASAAAGLLE LSVE
Sbjct: 121 ATDFADGELKDELFCIRFPSIENCKSFMETFQEIAESQQKKGENKDASAAAGLLETLSVE 180

Query: 181 EKKAEEDIAGDTPAKAKEVDDPKGEPEKSDAEKKSDE 218
           EKK  ED A + PAK K+ D+PKGEPEKS+AEKK+DE
Sbjct: 181 EKKT-EDKAEEEPAKVKKEDEPKGEPEKSEAEKKNDE 216

[Close]

BLAST of Sed0025680 vs. TAIR 10
Match: AT1G07140.1 (Pleckstrin homology (PH) domain superfamily protein )

HSP 1 Score: 285.4 bits (729), Expect = 3.8e-77
Identity = 158/227 (69.60%), Postives = 182/227 (80.18%), Query Frame = 0


Query: 1   MASTDP--ERRDEEDAPAGEDEDTGAQVAPIVKLEAVAVTTGEENEDAILDLKAKLYRFD 60
           MA+ +P  E RDEE+A A EDEDTGAQVAPIV+LE VAVTTGEE+EDA+LDLK+KLYRFD
Sbjct: 1   MATNEPEHEHRDEEEAGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKLYRFD 60

Query: 61  KDGNQWKERGAGTVKLLKHKESGKVRLVMRQSKTLKICANHLVVSSMSVQEHAGNEKSCV 120
           KD NQWKERGAGTVK LKHK +GK+RLVMRQSKTLKICANH V S MSVQEH GNEKSCV
Sbjct: 61  KDANQWKERGAGTVKFLKHKNTGKIRLVMRQSKTLKICANHFVKSGMSVQEHVGNEKSCV 120

Query: 121 WHAADFADGELKDELFCIRFPSIENCKSFMETFQEVAESQQKKEDNEDASAAAGLLENLS 180
           WHA DFADGELKDELFCIRF SIENCK+FM+ F+EVAES+++KE+++DA+  AGLLE L+
Sbjct: 121 WHARDFADGELKDELFCIRFASIENCKTFMQKFKEVAESEEEKEESKDAADTAGLLEKLT 180

Query: 181 VEEKKAEEDIAGDTPAKAKEV--------DDPKGEPEKSDAEKKSDE 218
           VEE K EE     T AKA E         +  + E EKS   KK++E
Sbjct: 181 VEETKTEE----KTEAKAVETAKTEVKAEEKKESEAEKSGEAKKTEE 223

[Close]

BLAST of Sed0025680 vs. TAIR 10
Match: AT5G58590.1 (RAN binding protein 1 )

HSP 1 Score: 284.3 bits (726), Expect = 8.4e-77
Identity = 154/218 (70.64%), Postives = 178/218 (81.65%), Query Frame = 0


Query: 1   MASTDPERRDEED-APAGEDEDTGAQVAPIVKLEAVAVTTGEENEDAILDLKAKLYRFDK 60
           MAST+PER + ED     EDEDTGAQVAPIV+LE VAVTTGEE+EDA+LDLK+K+YRFDK
Sbjct: 1   MASTEPERENREDETEVNEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKMYRFDK 60

Query: 61  DGNQWKERGAGTVKLLKHKESGKVRLVMRQSKTLKICANHLVVSSMSVQEHAGNEKSCVW 120
           +GNQWKERGAGTVKLLKHKE+GKVRLVMRQSKTLKICANHL+ S MSVQEH+GNEKSC+W
Sbjct: 61  EGNQWKERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEKSCLW 120

Query: 121 HAADFADGELKDELFCIRFPSIENCKSFMETFQEVAESQQKKEDNEDASAAAGLLENLSV 180
           HA DF+DGELKDELFCIRF SIENCK+FME F E+AESQQ  +++     AAGL+ENLSV
Sbjct: 121 HATDFSDGELKDELFCIRFASIENCKTFMEKFTEIAESQQVGKESTQGDEAAGLIENLSV 180

Query: 181 EEKKAEEDIAGDTPAKAKEVDDPKGEPEKSDAEKKSDE 218
           EE  +EE        KAKE ++   EP K D E K ++
Sbjct: 181 EENISEE--------KAKEAEEK--EPAKEDKETKKEK 208

[Close]

BLAST of Sed0025680 vs. TAIR 10
Match: AT2G30060.1 (Pleckstrin homology (PH) domain superfamily protein )

HSP 1 Score: 279.6 bits (714), Expect = 2.1e-75
Identity = 154/219 (70.32%), Postives = 183/219 (83.56%), Query Frame = 0


Query: 3   STDPER--RDEEDAPAGEDEDTGAQVAPIVKLEAVAVTTGEENEDAILDLKAKLYRFDKD 62
           S +PER  RDEE+  A EDEDTGAQVAPIV+LE VAVTTGEE+ED ILDLK+KLYRFDKD
Sbjct: 5   SNEPERENRDEEETGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDTILDLKSKLYRFDKD 64

Query: 63  GNQWKERGAGTVKLLKHKESGKVRLVMRQSKTLKICANHLVVSSMSVQEHAGNEKSCVWH 122
           G+QWKERGAGTVK LKH+ SGK+RLVMRQSKTLKICANHLV S MSVQEHAGN+KSCVWH
Sbjct: 65  GSQWKERGAGTVKFLKHRVSGKIRLVMRQSKTLKICANHLVGSGMSVQEHAGNDKSCVWH 124

Query: 123 AADFADGELKDELFCIRFPSIENCKSFMETFQEVAESQQKKEDNEDASAAAGLLENLSVE 182
           A DF+DGELKDELFCIRF S+ENCK+FM+ F+EVAES+++KE+++DAS  AGLLE L+VE
Sbjct: 125 ARDFSDGELKDELFCIRFASVENCKAFMQKFKEVAESEEEKEESKDASDTAGLLEKLTVE 184

Query: 183 EKKAEEDIAGDTPAKAKEVDDPKGEPEKSDA--EKKSDE 218
           EK++E+      P +  E      E +KS+A  EKK++E
Sbjct: 185 EKESEK-----KPVEKAE------ENKKSEAVEEKKTEE 212

The following BLAST results are available for this feature:

BLAST of Sed0025680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022998583.1	8.1e-98	88.07	ran-binding protein 1 homolog a-like [Cucurbita maxima]	[more]
XP_022949353.1	1.8e-97	87.61	ran-binding protein 1 homolog a-like [Cucurbita moschata] >XP_023523176.1 ran-bi...	[more]
KAG7036999.1	7.6e-96	87.44	Ran-binding protein 1-like c [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023519268.1	1.4e-94	86.70	ran-binding protein 1 homolog a-like [Cucurbita pepo subsp. pepo]	[more]
XP_022970594.1	3.2e-94	86.24	ran-binding protein 1 homolog a-like [Cucurbita maxima]	[more]

BLAST of Sed0025680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LMK7	5.3e-76	69.60	Ran-binding protein 1 homolog a OS=Arabidopsis thaliana OX=3702 GN=RANBP1A PE=1 ...	[more]
P92985	1.2e-75	70.64	Ran-binding protein 1 homolog c OS=Arabidopsis thaliana OX=3702 GN=RANBP1C PE=2 ...	[more]
Q8RWG8	2.9e-74	70.32	Ran-binding protein 1 homolog b OS=Arabidopsis thaliana OX=3702 GN=RANBP1B PE=1 ...	[more]
Q09717	3.1e-31	46.25	Ran-specific GTPase-activating protein 1 OS=Schizosaccharomyces pombe (strain 97...	[more]
P34022	1.1e-28	40.82	Ran-specific GTPase-activating protein OS=Mus musculus OX=10090 GN=Ranbp1 PE=1 S...	[more]

BLAST of Sed0025680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KH56	3.9e-98	88.07	ran-binding protein 1 homolog a-like OS=Cucurbita maxima OX=3661 GN=LOC111493171...	[more]
A0A6J1GBT0	8.8e-98	87.61	ran-binding protein 1 homolog a-like OS=Cucurbita moschata OX=3662 GN=LOC1114527...	[more]
A0A6J1I618	1.5e-94	86.24	ran-binding protein 1 homolog a-like OS=Cucurbita maxima OX=3661 GN=LOC111469535...	[more]
A0A6J1D9U4	1.5e-94	88.02	ran-binding protein 1 homolog b-like OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A0A0LV78	4.5e-94	85.25	RanBD1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G532330 PE=4...	[more]

BLAST of Sed0025680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07140.1	3.8e-77	69.60	Pleckstrin homology (PH) domain superfamily protein	[more]
AT5G58590.1	8.4e-77	70.64	RAN binding protein 1	[more]
AT2G30060.1	2.1e-75	70.32	Pleckstrin homology (PH) domain superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000156	Ran binding domain	SMART	SM00160	ranbd_3	coord: 26..154 e-value: 5.2E-44 score: 162.2
IPR000156	Ran binding domain	PFAM	PF00638	Ran_BP1	coord: 37..154 e-value: 2.0E-41 score: 141.1
IPR000156	Ran binding domain	PROSITE	PS50196	RANBD1	coord: 25..160 score: 34.779343
IPR011993	PH-like domain superfamily	GENE3D	2.30.29.30		coord: 9..174 e-value: 1.5E-54 score: 185.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 178..217
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..217
None	No IPR available	PANTHER	PTHR23138	RAN BINDING PROTEIN	coord: 1..216
None	No IPR available	PANTHER	PTHR23138:SF156	RAN-BINDING PROTEIN 1 HOMOLOG C-LIKE	coord: 1..216
None	No IPR available	CDD	cd13179	RanBD_RanBP1	coord: 23..156 e-value: 1.9622E-69 score: 206.651
None	No IPR available	SUPERFAMILY	50729	PH domain-like	coord: 28..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0025680.1	Sed0025680.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046907	intracellular transport
biological_process	GO:0050790	regulation of catalytic activity
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005643	nuclear pore
molecular_function	GO:0005096	GTPase activator activity