Sed0025656 (gene) Chayote v1

Overview


Name	Sed0025656
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Location	LG06: 42108197 .. 42110174 (+)
RNA-Seq Expression	Sed0025656
Synteny	Sed0025656

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTACTTCACTTTGAAGACCAATCGACACCTTCCCAACAGGTCCCAAATCGAAAAAATCTCAATTTGTTGCCAAAAATAAATAAATAAAAAAGATATTTCCTTTTCTTTTTTTTTACTTTGTGCATTGAAATGCAAGTTTTGATCTTGCTGGTGTTGCCATTGCTGAGTCTCTTTGGGCCATGGGGAATTGTGTTCTTGTTCATAGAGACAAGAAATCTGGTTCGAAATTCAAGTGGTCGATCGGTTCGAAGACAGTGGTTCATGTTAATGAGCCGATCGAGCCGAGCGCTACCGTTTGGGAGAAGGAAATTGAGATGCTTGGTTCGAGTCCTTTGTCTTTGTCCATCAACCATGTAGCCAGTTCACCAAAACTCGGTTTGATTTCTGCCTTCTTTTTATTTAATCTCTTTGATTTATGGCATTTGTGTTGGCATTTTGATAATTTTATGGGATTATCCTGTAGAAGGGCGATGGTTTTTTTTTAAAAAAAAAAATTGGGAATTTCTGATTACCACACTCATGTCTAGATCTAACATTGAAAGTCATTGAAAGAACAAAGATACGAAAAATACTTACAAATTAATGTCATAACTGAATCTTAAACTTAGGGAGAGAAAACATCTTTAAAACTGGACTCAAATAGATGAGATATTATAACATTTATGAAATAGTTGGGTTGTTTTTATATTTGTGTTACATATTTTCTACTATTTTGTGATAATAATAATAATGCGTCACACTTTGAATATGTCATTTCCCTTTCTTTAATTAAATCATCATTTTTTATAACATTTTTATTGTATTTTTGATATACTTACATTGTATGATACATTTTTATAATTACAAATGATGAAAAATATATGTACTTTGTAGAAAGTATTCAAATTTTGTTCTTGATTTTGGGATGAATCATGTTTATTCATTAATTTTTTTTTTCAAAATTAAGATTTTAATCAAATCCCAAAATAATAATAGTCTAAAATAACAATTTTTTTAGTTTCCAAAATTCAGTTTGATTTTTAAAAAATATAGGTAACTTTATAGATTTAGTTTTCAAAATTTATTTTTTAAAAATCAAATAGTTCTCCATGTGTGTGTTTTGGTGAATTGTTCTGTAATTTGATGTTTTGTGTGGCTTTAATGCAGGTAAAGCCGAAGAGATGTTTTTCGATTCACAGGCTTGGTTGGATTCTGATAACGAAGATTTCTTCAGTGTTAATGGAGGTCAAAACTATTTTATTTTTTATTTTTCATTTATGAAAATTAAGCTTACCATAACCACATCAATTTTTTTAACATCAAATCAAAATTTAATTAAAAACTTAAAAAATAGCTTTCAACATTTTATTAAAGAAAGATGAAACCCAAGTTAGAAAGGCAAGAGGTACGTAACTAACCTACCATTCATAAATCACCTAAATCTCTTAGGAGTGTTTGATTTTTGGTTTAGTTATTAGGTGATATATAATGTCATTAAAACTACATTCTTATTGACAGAAACTTCTTTGCAATTTTGTTGTCGTAAAAAAAATATTTTTTTACAAACAGATAATACGCCATCATATGGTAGCACTCCAATACGGTGTTTCGACACAATGGAAATGCCATCTCCCATAGTCATAAAGAAACAACTAATTGAACTATTTCGCGAGAGCTTCGATAGGGAACATGGAACAACAATTGCAAATGCATCAAGCAACAGTCACATTGAGCTCGTGAGAACGGAAGCTAACAATAATGAATCGATTTCGAGTGTGTGTTCGAAATCGATGAAAGGAAAATCAGCACAATCGACCCCGTGCTGCATTCCGGTTCCAAAATTGGCGCGCAGCATGAGCCTTGGCGACAAGAAGAAGAGGATGTCGAGCCCTTGCCGCAGCAGTGGATGATGTGTAATGCCTTTGGCTAATGTGAATTTGTATGTACACTACTTGGGAACGTTTTTTAACTTCAAAATTTGTTTAAATAACGATATG

mRNA sequence

CATTACTTCACTTTGAAGACCAATCGACACCTTCCCAACAGGTCCCAAATCGAAAAAATCTCAATTTGTTGCCAAAAATAAATAAATAAAAAAGATATTTCCTTTTCTTTTTTTTTACTTTGTGCATTGAAATGCAAGTTTTGATCTTGCTGGTGTTGCCATTGCTGAGTCTCTTTGGGCCATGGGGAATTGTGTTCTTGTTCATAGAGACAAGAAATCTGGTTCGAAATTCAAGTGGTCGATCGGTTCGAAGACAGTGGTTCATGTTAATGAGCCGATCGAGCCGAGCGCTACCGTTTGGGAGAAGGAAATTGAGATGCTTGGTTCGAGTCCTTTGTCTTTGTCCATCAACCATGTAGCCAGTTCACCAAAACTCGGTAAAGCCGAAGAGATGTTTTTCGATTCACAGGCTTGGTTGGATTCTGATAACGAAGATTTCTTCAGTGTTAATGGAGATAATACGCCATCATATGGTAGCACTCCAATACGGTGTTTCGACACAATGGAAATGCCATCTCCCATAGTCATAAAGAAACAACTAATTGAACTATTTCGCGAGAGCTTCGATAGGGAACATGGAACAACAATTGCAAATGCATCAAGCAACAGTCACATTGAGCTCGTGAGAACGGAAGCTAACAATAATGAATCGATTTCGAGTGTGTGTTCGAAATCGATGAAAGGAAAATCAGCACAATCGACCCCGTGCTGCATTCCGGTTCCAAAATTGGCGCGCAGCATGAGCCTTGGCGACAAGAAGAAGAGGATGTCGAGCCCTTGCCGCAGCAGTGGATGATGTGTAATGCCTTTGGCTAATGTGAATTTGTATGTACACTACTTGGGAACGTTTTTTAACTTCAAAATTTGTTTAAATAACGATATG

Coding sequence (CDS)

ATGGGGAATTGTGTTCTTGTTCATAGAGACAAGAAATCTGGTTCGAAATTCAAGTGGTCGATCGGTTCGAAGACAGTGGTTCATGTTAATGAGCCGATCGAGCCGAGCGCTACCGTTTGGGAGAAGGAAATTGAGATGCTTGGTTCGAGTCCTTTGTCTTTGTCCATCAACCATGTAGCCAGTTCACCAAAACTCGGTAAAGCCGAAGAGATGTTTTTCGATTCACAGGCTTGGTTGGATTCTGATAACGAAGATTTCTTCAGTGTTAATGGAGATAATACGCCATCATATGGTAGCACTCCAATACGGTGTTTCGACACAATGGAAATGCCATCTCCCATAGTCATAAAGAAACAACTAATTGAACTATTTCGCGAGAGCTTCGATAGGGAACATGGAACAACAATTGCAAATGCATCAAGCAACAGTCACATTGAGCTCGTGAGAACGGAAGCTAACAATAATGAATCGATTTCGAGTGTGTGTTCGAAATCGATGAAAGGAAAATCAGCACAATCGACCCCGTGCTGCATTCCGGTTCCAAAATTGGCGCGCAGCATGAGCCTTGGCGACAAGAAGAAGAGGATGTCGAGCCCTTGCCGCAGCAGTGGATGA

Protein sequence

MGNCVLVHRDKKSGSKFKWSIGSKTVVHVNEPIEPSATVWEKEIEMLGSSPLSLSINHVASSPKLGKAEEMFFDSQAWLDSDNEDFFSVNGDNTPSYGSTPIRCFDTMEMPSPIVIKKQLIELFRESFDREHGTTIANASSNSHIELVRTEANNNESISSVCSKSMKGKSAQSTPCCIPVPKLARSMSLGDKKKRMSSPCRSSG

Homology

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BLAST of Sed0025656 vs. NCBI nr
Match: XP_022151898.1 (uncharacterized protein At3g27210-like [Momordica charantia])

HSP 1 Score: 231.9 bits (590), Expect = 5.0e-57
Identity = 128/209 (61.24%), Postives = 152/209 (72.73%), Query Frame = 0


Query: 1   MGNCVLVHRDKKSGSKFKWSIGSKTVVHVNEPIEPSATVWEKEIEMLGSSPLSLSINHVA 60
           MGNCVLV R +KS S+FKWS+GS+TVV+V       A V EKEI  L SSPLS  +NHV 
Sbjct: 1   MGNCVLVRRHRKSVSEFKWSVGSETVVNVPSQ-SIKAIVLEKEIRRLCSSPLSSPMNHVP 60

Query: 61  SSPKLGKAEEMFFDSQAWLDSDNEDFFSVNGDNTPSYGSTPIRCFDTMEM----PSPIVI 120
            SP   K +E+FFDSQAWLDSDNEDFFSVNGDNTPS GSTPIR  + +E     PSP   
Sbjct: 61  CSPDFSKGDEIFFDSQAWLDSDNEDFFSVNGDNTPSRGSTPIRRPNGVETPPAEPSPKDG 120

Query: 121 KKQLIELFRESFDREHGTTIANASSNSHIELVRTEANNNE-SISSVCSKSMKGKSAQSTP 180
           KKQL ELFR+SF+ E G +    +SN H+E+V  E NN + S++   S+S+KGKSAQSTP
Sbjct: 121 KKQLFELFRDSFNSEQGRSSIANTSNRHVEVVNAEGNNKKPSLNKRRSRSVKGKSAQSTP 180

Query: 181 CCIPVPKLARSMSLGDKKKRMSSPCRSSG 205
           CC+PVP LARS+SLGDKKKR+ SPC   G
Sbjct: 181 CCLPVPNLARSLSLGDKKKRLLSPCHGGG 208

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BLAST of Sed0025656 vs. NCBI nr
Match: XP_038891766.1 (uncharacterized protein At3g27210-like [Benincasa hispida])

HSP 1 Score: 226.1 bits (575), Expect = 2.7e-55
Identity = 131/213 (61.50%), Postives = 158/213 (74.18%), Query Frame = 0


Query: 1   MGNCVLVHRDKKSGSKFKWSIGSKTVVHVNEPIEPS-ATVWEKEI-EMLGSSPLSLSINH 60
           MGNCV+V RD+KS S FKWS+GS+TVV+V+ P + + A VWEKEI   L SSPLS   +H
Sbjct: 1   MGNCVIVRRDQKSCSNFKWSVGSETVVNVDLPTDSNKANVWEKEIVGRLCSSPLS---SH 60

Query: 61  VASSPKLGKAEEMFFDSQAWLDSDNEDFFSVNGDNTPSYGSTPIRCFDTMEMP-----SP 120
           +ASSP+  K +EMFFDSQAWLDSDN+DFFSVNGDNTPS GSTP+   + +E P      P
Sbjct: 61  LASSPQFSKGDEMFFDSQAWLDSDNDDFFSVNGDNTPSCGSTPVWRPNAVEAPPADPLPP 120

Query: 121 IVIKKQLIELFRESFDREHGTTIANASSNSH-IELVRTEANNNESISSVCSKSMKGKSAQ 180
              KK L ELF+ESF+R+HG +IAN +SN H IE+V  EANN + I    S+S+  KSAQ
Sbjct: 121 KETKKLLFELFQESFNRDHGRSIANTTSNRHNIEVVIMEANNKKPI----SRSVNEKSAQ 180

Query: 181 S-TPCCIPVPKLARSMSLGDKKKRMSSPCRSSG 205
           S TP CIPVPKLARS+SLGDKKKR+ SPC   G
Sbjct: 181 STTPWCIPVPKLARSLSLGDKKKRLLSPCHGGG 206

[Close]

BLAST of Sed0025656 vs. NCBI nr
Match: XP_023541226.1 (uncharacterized protein At3g27210-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 222.6 bits (566), Expect = 3.0e-54
Identity = 127/211 (60.19%), Postives = 148/211 (70.14%), Query Frame = 0


Query: 1   MGNCVLVHRDKKSGSKFKWSIGSKTVVHVNEPIEPSATVWEKEIEMLGSSPLSLSINHVA 60
           MGNCVL+ RD+KS  KFKWS+GS  +V+V  PI    T  ++    L SSP S   +H+ 
Sbjct: 1   MGNCVLIRRDQKSDPKFKWSVGSGALVNVRVPI---PTELDQANGRLCSSPPS---SHLP 60

Query: 61  SSPKLGKAEEMFFDSQAWLDSDNEDFFSVNGDNTPSYGSTPIRCFDTMEM----PSPIVI 120
           SSP+ GK +EMFFDSQAWLDSDN+DFFSVNGDNTPS  STPI   + +E     PSP   
Sbjct: 61  SSPEFGKGDEMFFDSQAWLDSDNDDFFSVNGDNTPSCSSTPIWRPNAVETPAVEPSPEGT 120

Query: 121 KKQLIELFRESFDREHGTTIANASSNSHIELVRTEANNNESISSVC---SKSMKGKSAQS 180
           KK LIELFRESFD EHG TI  A+SN HI +V  E NNN +    C   S+S+KGKSAQS
Sbjct: 121 KKLLIELFRESFDSEHGRTIGTATSNGHIGVVIMEGNNNNNSKPNCGGRSRSVKGKSAQS 180

Query: 181 TPCCIPVPKLARSMSLGDKKKRMSSPCRSSG 205
           T  CIPVPKLARS+SL DKKKR+ SPCR  G
Sbjct: 181 TAWCIPVPKLARSLSLSDKKKRLLSPCRGGG 205

[Close]

BLAST of Sed0025656 vs. NCBI nr
Match: XP_022957118.1 (uncharacterized protein At3g27210-like [Cucurbita moschata])

HSP 1 Score: 219.9 bits (559), Expect = 2.0e-53
Identity = 128/213 (60.09%), Postives = 150/213 (70.42%), Query Frame = 0


Query: 1   MGNCVLVHRDKKSGSKFKWSIGSKTVVHVNEPIEPSATVWEKEIEMLGSSPLSLSINHVA 60
           MGNCVL+ RD+KS  KFKWS+GS  +V+V  PI    T  ++    L SSP S   +H+ 
Sbjct: 1   MGNCVLIRRDQKSDPKFKWSVGSGALVNVRVPI---PTELDQANGRLCSSPPS---SHLP 60

Query: 61  SSPKLGKAEEMFFDSQAWLDSDNEDFFSVNGDNTPSYGSTPIRCFDTMEM----PSPIVI 120
           SSP+ GK +EMFFDSQAWLDSDN+DFFSVNGDN PS GSTPI   + +E     PSP   
Sbjct: 61  SSPEFGKGDEMFFDSQAWLDSDNDDFFSVNGDNMPSCGSTPIWRPNAVETPAVEPSPEGT 120

Query: 121 KKQLIELFRESFDREHGTTIANASSNSHIELVRTEANNNESISSV--C---SKSMKGKSA 180
           KK LIELFRESFD EHG+TI  A SN HI +V  E NNN + +S   C   S+S+KGKSA
Sbjct: 121 KKLLIELFRESFDSEHGSTIGTAMSNGHIGVVIMEGNNNNNNNSKPNCGGRSRSVKGKSA 180

Query: 181 QSTPCCIPVPKLARSMSLGDKKKRMSSPCRSSG 205
           QST  CIPVPKLARS+SL DKKKR+ SPCR  G
Sbjct: 181 QSTAWCIPVPKLARSLSLSDKKKRLLSPCRGGG 207

[Close]

BLAST of Sed0025656 vs. NCBI nr
Match: XP_022998641.1 (uncharacterized protein At3g27210-like [Cucurbita maxima])

HSP 1 Score: 218.8 bits (556), Expect = 4.4e-53
Identity = 127/213 (59.62%), Postives = 150/213 (70.42%), Query Frame = 0


Query: 1   MGNCVLVHRDKKSGSKFKWSIGSKTVVHVNEPIEPSATVWEKEIEMLGSSPLSLSINHVA 60
           MGNCVL+ RD+KS  KFKWS+GS  +V+V  P+    T  ++    L SSP S   +H+ 
Sbjct: 1   MGNCVLIRRDQKSDPKFKWSVGSGALVNVRVPM---PTELDQANGRLCSSPPS---SHLP 60

Query: 61  SSPKLGKAEEMFFDSQAWLDSDNEDFFSVNGDNTPSYGSTPIRCFDTMEM----PSPIVI 120
           SSP+ GK +EMFFDSQAWLDSDN+DFFSVNGDNTPS  STPI   + +E     PSP   
Sbjct: 61  SSPEFGKGDEMFFDSQAWLDSDNDDFFSVNGDNTPSCSSTPIWRPNAIETPAVEPSPEGT 120

Query: 121 KKQLIELFRESFDREHGTTIANASSNSHIELVRTEANNNESISSV--C---SKSMKGKSA 180
           KK LIELFRESFD EHG TI  A+SN HI +V  E NNN + +S   C   S+S+KGKSA
Sbjct: 121 KKLLIELFRESFDSEHGRTIGTATSNGHIGVVIMEGNNNNNNNSKPNCSGRSRSVKGKSA 180

Query: 181 QSTPCCIPVPKLARSMSLGDKKKRMSSPCRSSG 205
           QST  CIPVPKLARS+SL DKKKR+ SPCR  G
Sbjct: 181 QSTAWCIPVPKLARSLSLSDKKKRLLSPCRGGG 207

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BLAST of Sed0025656 vs. ExPASy Swiss-Prot
Match: Q9LK32 (Uncharacterized protein At3g27210 OS=Arabidopsis thaliana OX=3702 GN=Y-2 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 5.8e-08
Identity = 53/168 (31.55%), Postives = 77/168 (45.83%), Query Frame = 0


Query: 50  SPLSLSINHVASSPKLGKAEEMFFDSQAWLDSD-NEDFFSVNGDNTPSYGSTPIRCFDT- 109
           +P+    +  +S    G  +E FFDSQ WL SD ++DF SVNGD TPS G+TP   F   
Sbjct: 63  TPVKSRWSFSSSKKSFGSKDETFFDSQPWLQSDSDDDFHSVNGDFTPSLGNTPKSSFSDR 122

Query: 110 -----------------MEMPSPIVIKKQLIELFRESFDREHGTTIANASSNSHIELVRT 169
                               P+P+  +K+L ELFR+S   E      + SS++      +
Sbjct: 123 PPRFHNLIFHEKKPSRGSSSPAPLPRRKKLGELFRDSIREERE---ESGSSSAISTPYLS 182

Query: 170 EANNNESISSVCSKSMKGKSAQSTPCCIPVPKLARSMSLGDKKKRMSS 199
            AN+ E   +   K  K KS      C+P        S  +++K+MSS
Sbjct: 183 GANSREFNDTAIEKEEKKKSNWHHHRCLPGFSSCGG-SFMERRKKMSS 226

[Close]

BLAST of Sed0025656 vs. ExPASy TrEMBL
Match: A0A6J1DDF2 (uncharacterized protein At3g27210-like OS=Momordica charantia OX=3673 GN=LOC111019754 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 2.4e-57
Identity = 128/209 (61.24%), Postives = 152/209 (72.73%), Query Frame = 0


Query: 1   MGNCVLVHRDKKSGSKFKWSIGSKTVVHVNEPIEPSATVWEKEIEMLGSSPLSLSINHVA 60
           MGNCVLV R +KS S+FKWS+GS+TVV+V       A V EKEI  L SSPLS  +NHV 
Sbjct: 1   MGNCVLVRRHRKSVSEFKWSVGSETVVNVPSQ-SIKAIVLEKEIRRLCSSPLSSPMNHVP 60

Query: 61  SSPKLGKAEEMFFDSQAWLDSDNEDFFSVNGDNTPSYGSTPIRCFDTMEM----PSPIVI 120
            SP   K +E+FFDSQAWLDSDNEDFFSVNGDNTPS GSTPIR  + +E     PSP   
Sbjct: 61  CSPDFSKGDEIFFDSQAWLDSDNEDFFSVNGDNTPSRGSTPIRRPNGVETPPAEPSPKDG 120

Query: 121 KKQLIELFRESFDREHGTTIANASSNSHIELVRTEANNNE-SISSVCSKSMKGKSAQSTP 180
           KKQL ELFR+SF+ E G +    +SN H+E+V  E NN + S++   S+S+KGKSAQSTP
Sbjct: 121 KKQLFELFRDSFNSEQGRSSIANTSNRHVEVVNAEGNNKKPSLNKRRSRSVKGKSAQSTP 180

Query: 181 CCIPVPKLARSMSLGDKKKRMSSPCRSSG 205
           CC+PVP LARS+SLGDKKKR+ SPC   G
Sbjct: 181 CCLPVPNLARSLSLGDKKKRLLSPCHGGG 208

[Close]

BLAST of Sed0025656 vs. ExPASy TrEMBL
Match: A0A6J1GZB4 (uncharacterized protein At3g27210-like OS=Cucurbita moschata OX=3662 GN=LOC111458596 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 9.5e-54
Identity = 128/213 (60.09%), Postives = 150/213 (70.42%), Query Frame = 0


Query: 1   MGNCVLVHRDKKSGSKFKWSIGSKTVVHVNEPIEPSATVWEKEIEMLGSSPLSLSINHVA 60
           MGNCVL+ RD+KS  KFKWS+GS  +V+V  PI    T  ++    L SSP S   +H+ 
Sbjct: 1   MGNCVLIRRDQKSDPKFKWSVGSGALVNVRVPI---PTELDQANGRLCSSPPS---SHLP 60

Query: 61  SSPKLGKAEEMFFDSQAWLDSDNEDFFSVNGDNTPSYGSTPIRCFDTMEM----PSPIVI 120
           SSP+ GK +EMFFDSQAWLDSDN+DFFSVNGDN PS GSTPI   + +E     PSP   
Sbjct: 61  SSPEFGKGDEMFFDSQAWLDSDNDDFFSVNGDNMPSCGSTPIWRPNAVETPAVEPSPEGT 120

Query: 121 KKQLIELFRESFDREHGTTIANASSNSHIELVRTEANNNESISSV--C---SKSMKGKSA 180
           KK LIELFRESFD EHG+TI  A SN HI +V  E NNN + +S   C   S+S+KGKSA
Sbjct: 121 KKLLIELFRESFDSEHGSTIGTAMSNGHIGVVIMEGNNNNNNNSKPNCGGRSRSVKGKSA 180

Query: 181 QSTPCCIPVPKLARSMSLGDKKKRMSSPCRSSG 205
           QST  CIPVPKLARS+SL DKKKR+ SPCR  G
Sbjct: 181 QSTAWCIPVPKLARSLSLSDKKKRLLSPCRGGG 207

[Close]

BLAST of Sed0025656 vs. ExPASy TrEMBL
Match: A0A6J1KAP3 (uncharacterized protein At3g27210-like OS=Cucurbita maxima OX=3661 GN=LOC111493225 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 2.1e-53
Identity = 127/213 (59.62%), Postives = 150/213 (70.42%), Query Frame = 0


Query: 1   MGNCVLVHRDKKSGSKFKWSIGSKTVVHVNEPIEPSATVWEKEIEMLGSSPLSLSINHVA 60
           MGNCVL+ RD+KS  KFKWS+GS  +V+V  P+    T  ++    L SSP S   +H+ 
Sbjct: 1   MGNCVLIRRDQKSDPKFKWSVGSGALVNVRVPM---PTELDQANGRLCSSPPS---SHLP 60

Query: 61  SSPKLGKAEEMFFDSQAWLDSDNEDFFSVNGDNTPSYGSTPIRCFDTMEM----PSPIVI 120
           SSP+ GK +EMFFDSQAWLDSDN+DFFSVNGDNTPS  STPI   + +E     PSP   
Sbjct: 61  SSPEFGKGDEMFFDSQAWLDSDNDDFFSVNGDNTPSCSSTPIWRPNAIETPAVEPSPEGT 120

Query: 121 KKQLIELFRESFDREHGTTIANASSNSHIELVRTEANNNESISSV--C---SKSMKGKSA 180
           KK LIELFRESFD EHG TI  A+SN HI +V  E NNN + +S   C   S+S+KGKSA
Sbjct: 121 KKLLIELFRESFDSEHGRTIGTATSNGHIGVVIMEGNNNNNNNSKPNCSGRSRSVKGKSA 180

Query: 181 QSTPCCIPVPKLARSMSLGDKKKRMSSPCRSSG 205
           QST  CIPVPKLARS+SL DKKKR+ SPCR  G
Sbjct: 181 QSTAWCIPVPKLARSLSLSDKKKRLLSPCRGGG 207

[Close]

BLAST of Sed0025656 vs. ExPASy TrEMBL
Match: A0A5A7SSL1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G002000 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 1.1e-52
Identity = 131/215 (60.93%), Postives = 153/215 (71.16%), Query Frame = 0


Query: 1   MGNCVLVHRDKKSGSKFKWSIGSKTVVHVNEPIEPS---ATVWEKE-IEMLGSSPLSLSI 60
           MGNCVLV RD+K  SKFKWS+GS TVV+VN     S     VWEKE I  L SSP  LS 
Sbjct: 1   MGNCVLVRRDQKPDSKFKWSVGSGTVVNVNVSSNESDNKPEVWEKEIIGRLCSSP-RLSS 60

Query: 61  NHVASSPKLGKAEEMFFDSQAWLDSDNEDFFSVNGDNTPSYGSTPIRCFDTMEMP----- 120
           +   SSP  GK +E+FFDSQAWLDSDN+DFFSVNGDNTPS G+TP+   +T+E P     
Sbjct: 61  HLQPSSPPFGKGDEIFFDSQAWLDSDNDDFFSVNGDNTPSCGNTPLWRPNTIEAPLADPS 120

Query: 121 SPIVIKKQLIELFRESFDREHGTTIANAS-SNSH-IELVRTEANNNESISSVCSKSMKGK 180
           SP   KK L ELF+ESF+REHG +IAN + SN H IE+V  EAN+ + I    SKS+KG 
Sbjct: 121 SPKQRKKLLFELFQESFNREHGRSIANPTISNRHNIEVVIMEANDKKPI----SKSVKGN 180

Query: 181 SAQSTPCCIPVPKLARSMSLGDKKKRMSSPCRSSG 205
           S QSTP CIPVPKL RS+SLG+KKKR+ SPCR  G
Sbjct: 181 STQSTPWCIPVPKLTRSLSLGEKKKRLLSPCRGGG 210

[Close]

BLAST of Sed0025656 vs. ExPASy TrEMBL
Match: A0A1S3BEU1 (uncharacterized protein At3g27210-like OS=Cucumis melo OX=3656 GN=LOC103488900 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 1.1e-52
Identity = 131/215 (60.93%), Postives = 153/215 (71.16%), Query Frame = 0


Query: 1   MGNCVLVHRDKKSGSKFKWSIGSKTVVHVNEPIEPS---ATVWEKE-IEMLGSSPLSLSI 60
           MGNCVLV RD+K  SKFKWS+GS TVV+VN     S     VWEKE I  L SSP  LS 
Sbjct: 1   MGNCVLVRRDQKPDSKFKWSVGSGTVVNVNVSSNESDNKPEVWEKEIIGRLCSSP-RLSS 60

Query: 61  NHVASSPKLGKAEEMFFDSQAWLDSDNEDFFSVNGDNTPSYGSTPIRCFDTMEMP----- 120
           +   SSP  GK +E+FFDSQAWLDSDN+DFFSVNGDNTPS G+TP+   +T+E P     
Sbjct: 61  HLQPSSPPFGKGDEIFFDSQAWLDSDNDDFFSVNGDNTPSCGNTPLWRPNTIEAPLADPS 120

Query: 121 SPIVIKKQLIELFRESFDREHGTTIANAS-SNSH-IELVRTEANNNESISSVCSKSMKGK 180
           SP   KK L ELF+ESF+REHG +IAN + SN H IE+V  EAN+ + I    SKS+KG 
Sbjct: 121 SPKQRKKLLFELFQESFNREHGRSIANPTISNRHNIEVVIMEANDKKPI----SKSVKGN 180

Query: 181 SAQSTPCCIPVPKLARSMSLGDKKKRMSSPCRSSG 205
           S QSTP CIPVPKL RS+SLG+KKKR+ SPCR  G
Sbjct: 181 STQSTPWCIPVPKLTRSLSLGEKKKRLLSPCRGGG 210

[Close]

BLAST of Sed0025656 vs. TAIR 10
Match: AT3G01860.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 66 Blast hits to 66 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 61.2 bits (147), Expect = 1.1e-09
Identity = 71/225 (31.56%), Postives = 106/225 (47.11%), Query Frame = 0


Query: 1   MGNCVLVHRDKKSGSKFKWSIGSKTVVHVNEPI-EPSATVWEKEIEMLGSSPLSLSINHV 60
           MG+CV       S S+ K S  S +VV +   I +P +T   K   M+ SS ++ +    
Sbjct: 1   MGSCV-------SSSQSKSSSASDSVVKLASFISKPDSTPPLKTDVMITSSTINGNPPID 60

Query: 61  ASSPKLGKAEEM-FFDSQAWLDSD-NEDFFSVNGDNTPSYGSTPIR---CFDT------- 120
           +     G  E+M FFDS+ WLDSD ++DF SV G+ TPS G+TP+    C  T       
Sbjct: 61  SGRWDSGNKEDMIFFDSRGWLDSDCDDDFMSVGGEFTPSRGTTPVHHKFCDQTPHQGEEN 120

Query: 121 -----MEMPSPIVIKKQLIELFRES---FDREHGTTIANASSNSHIEL---VRTEA---- 180
                 E  SP   KK+L+ELF+E+    D E    +A   + + + +   VR+ A    
Sbjct: 121 KHGEEEEEASPTDNKKRLLELFKETQDEEDEEEEDYVAEGKARACLWIRTPVRSSAPATP 180

Query: 181 -NNNESISSVCSKSMKGKSAQSTPCCIPVPKLARSMSLGDKKKRM 197
            NNN+       +  K K  +S      VP+L    S  D+++ M
Sbjct: 181 YNNNK------ERQQKFKRVRSAALGRCVPRLVSCSSFTDRRRNM 212

[Close]

BLAST of Sed0025656 vs. TAIR 10
Match: AT3G27210.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40860.1); Has 133 Blast hits to 98 proteins in 25 species: Archae - 0; Bacteria - 6; Metazoa - 32; Fungi - 7; Plants - 70; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). )

HSP 1 Score: 59.3 bits (142), Expect = 4.1e-09
Identity = 53/168 (31.55%), Postives = 77/168 (45.83%), Query Frame = 0


Query: 50  SPLSLSINHVASSPKLGKAEEMFFDSQAWLDSD-NEDFFSVNGDNTPSYGSTPIRCFDT- 109
           +P+    +  +S    G  +E FFDSQ WL SD ++DF SVNGD TPS G+TP   F   
Sbjct: 63  TPVKSRWSFSSSKKSFGSKDETFFDSQPWLQSDSDDDFHSVNGDFTPSLGNTPKSSFSDR 122

Query: 110 -----------------MEMPSPIVIKKQLIELFRESFDREHGTTIANASSNSHIELVRT 169
                               P+P+  +K+L ELFR+S   E      + SS++      +
Sbjct: 123 PPRFHNLIFHEKKPSRGSSSPAPLPRRKKLGELFRDSIREERE---ESGSSSAISTPYLS 182

Query: 170 EANNNESISSVCSKSMKGKSAQSTPCCIPVPKLARSMSLGDKKKRMSS 199
            AN+ E   +   K  K KS      C+P        S  +++K+MSS
Sbjct: 183 GANSREFNDTAIEKEEKKKSNWHHHRCLPGFSSCGG-SFMERRKKMSS 226

[Close]

BLAST of Sed0025656 vs. TAIR 10
Match: AT5G40860.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 69 Blast hits to 69 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 55.8 bits (133), Expect = 4.6e-08
Identity = 60/192 (31.25%), Postives = 89/192 (46.35%), Query Frame = 0


Query: 29  VNEPIEPSATVWEKEIEMLGSSPLSLSINHVASSPKLGKA-EEMFFDSQAWLDSDNE-DF 88
           V E + P AT   K ++   S+ +    +  +S    G + +E +FDS  W  SD+E DF
Sbjct: 52  VKENLAPVAT--PKTVDNGLSAQVKSRWSFSSSKRSFGSSKDETYFDSHQWQQSDSEDDF 111

Query: 89  FSVNGDNTPSYGSTPIRCFDTMEMP------------------SPIVIKKQLIELFRESF 148
           +SV GD TPS G+TP RC  + ++P                  SP   +K+L ELFR+S 
Sbjct: 112 YSVRGDFTPSVGNTP-RCSISEKLPRIHSPLFEGEKPRVSFSHSPAPRRKKLGELFRDSI 171

Query: 149 DREHGTTIANASSNSHIELVRTEANNNESISSVCSKSMKGKSAQSTPC-----CIPVPKL 196
            RE    I   SS    E  +  + +N     V  +S+K K    +P      C+P    
Sbjct: 172 -REERAVILEESSEYQSEKSKKSSCDNSGELKVIEESVKEKKNLKSPLNYHHRCLPRFSS 231

[Close]

BLAST of Sed0025656 vs. TAIR 10
Match: AT3G01860.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 64 Blast hits to 64 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 53.5 bits (127), Expect = 2.3e-07
Identity = 50/153 (32.68%), Postives = 74/153 (48.37%), Query Frame = 0


Query: 71  MFFDSQAWLDSD-NEDFFSVNGDNTPSYGSTPIR---CFDT------------MEMPSPI 130
           +FFDS+ WLDSD ++DF SV G+ TPS G+TP+    C  T             E  SP 
Sbjct: 2   IFFDSRGWLDSDCDDDFMSVGGEFTPSRGTTPVHHKFCDQTPHQGEENKHGEEEEEASPT 61

Query: 131 VIKKQLIELFRES---FDREHGTTIANASSNSHIEL---VRTEA-----NNNESISSVCS 190
             KK+L+ELF+E+    D E    +A   + + + +   VR+ A     NNN+       
Sbjct: 62  DNKKRLLELFKETQDEEDEEEEDYVAEGKARACLWIRTPVRSSAPATPYNNNK------E 121

Query: 191 KSMKGKSAQSTPCCIPVPKLARSMSLGDKKKRM 197
           +  K K  +S      VP+L    S  D+++ M
Sbjct: 122 RQQKFKRVRSAALGRCVPRLVSCSSFTDRRRNM 148

The following BLAST results are available for this feature:

BLAST of Sed0025656 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151898.1	5.0e-57	61.24	uncharacterized protein At3g27210-like [Momordica charantia]	[more]
XP_038891766.1	2.7e-55	61.50	uncharacterized protein At3g27210-like [Benincasa hispida]	[more]
XP_023541226.1	3.0e-54	60.19	uncharacterized protein At3g27210-like [Cucurbita pepo subsp. pepo]	[more]
XP_022957118.1	2.0e-53	60.09	uncharacterized protein At3g27210-like [Cucurbita moschata]	[more]
XP_022998641.1	4.4e-53	59.62	uncharacterized protein At3g27210-like [Cucurbita maxima]	[more]

BLAST of Sed0025656 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LK32	5.8e-08	31.55	Uncharacterized protein At3g27210 OS=Arabidopsis thaliana OX=3702 GN=Y-2 PE=1 SV...	[more]

BLAST of Sed0025656 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DDF2	2.4e-57	61.24	uncharacterized protein At3g27210-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1GZB4	9.5e-54	60.09	uncharacterized protein At3g27210-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1KAP3	2.1e-53	59.62	uncharacterized protein At3g27210-like OS=Cucurbita maxima OX=3661 GN=LOC1114932...	[more]
A0A5A7SSL1	1.1e-52	60.93	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3BEU1	1.1e-52	60.93	uncharacterized protein At3g27210-like OS=Cucumis melo OX=3656 GN=LOC103488900 P...	[more]

BLAST of Sed0025656 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01860.1	1.1e-09	31.56	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]
AT3G27210.1	4.1e-09	31.55	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT5G40860.1	4.6e-08	31.25	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G01860.2	2.3e-07	32.68	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34280:SF2	OS01G0920100 PROTEIN	coord: 1..200
IPR038947	At3g27210-like	PANTHER	PTHR34280	OS01G0920100 PROTEIN	coord: 1..200

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0025656.1	Sed0025656.1	mRNA