Sed0025638 (gene) Chayote v1

Overview


Name	Sed0025638
Type	gene
Organism	Sechium edule (Chayote v1)
Description	transcription factor bHLH110 isoform X1
Location	LG13: 21324586 .. 21329128 (+)
RNA-Seq Expression	Sed0025638
Synteny	Sed0025638

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAATAACCCCACGCTCTATCTTTCTTTCTTTTCAAGGCTACTTTACTAAGGCCTAAAGAAATTTAGAGAAAAATGAGGGGTCAAAATGCAAAATATGAATTGTACAACATGTTGCCTTTGTTTCAATGAATAACAGTTAGAACAAAGCAATTCTTGGTTGTGTGTGTGTTTCTTTGGTCTTTTATAATTACTTGGTTTTTTTTTTTTTTTGTAATTTTGATTCTTCTTGGGATTTTCAAGCTGCCTTTTTTTTTTGTTTATAAATATTTATTACTTATCAACTCCAAATCCTTGTGTGTATATGGAGTCTGCTGCTAATCTCCATCAGCTTCAAGACCAGCTTCTTGTTCCTTCTTCTTCTTCTTCTTTGCCCATTATTCCATCTTGTTTTGGCCTTGCAAACACTCATGGATGGACTCCAAATCTCTCTTTGTAAGTTCACTCTCTTTCTCTTTCTCGGGTATCGGTCATACTCAAAACATCGATTTGAGAGACGTTATTAATGTTTTTTTTTTAATTAACAACATTTGAGACGACAGATTTGAAACTTGTAATGTTTTGATTACTCAGTTATACATCATGTCATTAAAACTATGTTCATATTGATAGATCTTGATTATTTTTTTTTGTGTTTAGGTTTTTAGAGTTTTTCTTGAAATGTGGCATTTGGAATTTATGTCATTGATGTTTTGTTCTCTTTCAATTTAATTTGGATGAGGCGCCCCTACAAAAAGACAAGCCTTTTAGCATCAATAATCGAAAATTTTCAAGCTTTCCCAAGACCCCATTTAATTGTAATAATTAAGAAAAAAACTTAGGGTTTTGATTTTTTTTTTTTCTTTTCTTTTCCTCCCACTTAATATGGCAGATTTTGGTTTTGTGTTTTGACAGGAATAATAATAACACAAACAATTCAATGCTTCAAGATTTTGGCTTTCAATGGATCAGTTCTGAAAACTTGTTATCTCATTCTCTTCAAAACCCACAAGCTGAAAAATTCACAGAAATGTTGAACAACCCTTCATGTACAGATCAAGATTTGGATCTGAATGATCTCAGCCACAAGCTCTCGATCAAAATCAACGGTGGAGATTTCTACAACATTAACTCAAGATCAAATAATAATAGACCCCATTTTGCTCAAATTTACCCAAGTATTAATGTCTCTAATTGGAACCTCTCAACTCCGGCGCCGCCGCCGGCGTTCTCAAATTGCTTAGACTTGAACTTACAAACGCCGGCGGATTTGTTCGCCGCCGCCGGAAATTTTGGTTTTCACCATCAGATCCAACCAAGTAAAGTGAGTTCATTTTTTTCCTATTTTCTCAAAAAAAAAAATTAATTTTTATTGTGGAGTTTTTCTTTTTGCAGCATGGAAGGTATTTTCAGCTTTATACATTTGTAATTGTAAATGCATATGCTTTCCAGTCAACTACTTTTCTTTTCTTTCTTTTTTTTTTATTTTCTTTTAATTTATTTATTTTCTTGGTCTTTTTTTTGGATTTTTAAAGATGACACCTTTTACAAGTGAAGTAACTGAACCTAAACGATGTAACTCCACGGAACCAAGGATAAACCAACATTCTCCTCCTCTTAAAAAACCGCGATCGGACTCGCGCTCGCTTTGCCCGCCACTAAAGGTTTGAATTTTATTTTTGAACTCGTGATCTTTTAATTATCAACGTCGATTGACATCGACAGCTACTATAAATTCACACTTTTTTTTGTGGCTTTTTTTTTTGTTGGCAGGTTAGAAAAGAGAAACTAGGTGATAGAATTGCAGCCCTTCAACAATTGGTAGCACCATTTGGAAAGGTAATTATTTAGCATGACCCTAACAATGAAGTTGCCACTTTTATAATCTTATCCCAATGCTTTTTCTTTTTTTACTTTATTTTGTACATTTAATGATATAAACATTAAATAAATTTGCACTTAACTTTGAGATTTTTTTTATGAATAATTAAAAATAAAAATCTACCGATGCCAAAATATTAGGATTTTAAAAAAAATTGTTTTATGACATTTCAACCCACAAACTCTTCATAATTACTTTTTTTTATGAAAATTTACATATTTTGTTGCTAAAATTAAAATAGATATGTTATAATTTTCCACTTACAAAAATTAACTAATTAAGACATATACCACATTGATTGATTTATTTATTTTTTTTGAAACACCACACCACATTGATTTAAACATTTGAGAAAGTTTGTAATGTCTCCCATCTCCTCATAACTTTAAACTCTAACACATAATGTAACATTCAAGAAATTATTCGATATACAACTAGGTGGTTTTATACTAAATGTATGAAAGATAAATTATAAAAGTTACCATGATTAGAGCTAATAAACTTTAAGGTCATCTACACTATTCCTAAGGGATAGTTTCATTATGTTTTCTTCCAAATCTCGATTTTAAAATTCATGAGTGTGCTTATTGTAACCTAAGAAGCACGGATACGGACACGTAGACACGCCATTATTTAAAAATGTAGAATACTGGATACTTGGCGAGGACATGTGATTTATTATTATTTTTTATATTATTCTATTAAAAGATGAAATCCAAAATATTTAAGTTAGTTATAAGCATATGGCATAATAATCTCTAAATATTTTAGTTTTTATCTCATTTTCCTTCCCTCTATTTTACTTTCTCTCTTTCTTTCCTTTTTTTTCATTTTAGTCCATCTATCTTCGATAGACATTGTCGTCGACGACCTCCACCAACACTACCCATTTTTGTGTCATCCGCCATTGGAAATAAATAAGTCTTAATTGAGGTGTCCATAAAGTCTCTATGGTGTGTTTGTAAAGTGTACGAAATTGAAAATAATAATAATAATAAAAGAGGACACGGAATTTTGAATGTCCAACGAGTGTTCGAAAGTATGGGTGTCAGACACGAGTACGACACGAATACTTTGTCAAAATAAAAATGTCTTGTGTTTCCTAGATTGTAACAACCTCCTTATTTTCTCTCTAGTTTTGACTTTAAAACGGGTGCAAGTGCATAATAGAGCAATCTAGATCTCATAATTTTAGTAAGTAGCAATAATTGGTTGGAAAATGTCTTTCATATGTGATTAAATTTATTTAATAATCTTATGAATAAGTTTGAATGATTAATTTGACCCACTGGGATTTCTGAAATGACAAAATCTTAAGAGTTCTGTTCGTTTGTTGTTGTTAAAAAACATACTGGGTTTAAGAATGACATGTAATGCTAATCATGTTACAGACAGACACAGCATCTGTGTTAATGGAAGCCATTGGATACATAAAATTCCTTCAAAATCAGGTCGAGGTATTTTTCTTTAATTACTTCCCCAATGTTTTTCCCTTTTGAACTACATGTCGTTTCAAACCAACTCATCGCCCTTTAAAATTGCAGACCTTGAGTGTTCCATACATGAAACCCTCGTCTAAGCCGACACATCGGGTAAGAATAAACAAATAATACCATAAAGGGTATATTATAAGTTTGGCCATTACTCGAATGCAGTTATACTTTAGTTTATATAATTTCAAAAATTAGAATTTAATTTCCTATAATTAGAAGAATGTTAAATTTTAGTTTCGATAATTTTTTGAACTAGTAGATCATCGCCTATGAAAAGATATTATTACTCTAGGTGGTCTTTGGTGTTCGAAATCGAACCTTTTCGAACATTATAATATTGTCACTTATTGCTTTAAACTAGAGTTCGTTTTTCAAACCTTTTGTATGTAAATTGTTTTCAAAAAAGAAAAATTAAACTAGAATTTATTCAATATAGTTTGATAAAATTTTAAAAATAATCTTATCTTGTTCTTAAAAGTTAGCTATGAAGTATGTGAAAATCAATTATTTATATGTATATGATGATAATGTAAATTAAGTAATTGATTGGACACAAAACATACACATAAATAACCAACTAAATTTTACCATATCACGAGGACTTAACTTTTAATTATTAAAATCATAAATACTAAATTCTAATCTTCTTCAAATTATAGAGACAGAATTCTAATTTTATAAATTATAGAGATTGAATTCTAACTTTTTTGTCACCGTGAAAATCAGCTTTATAATTTACCCTAATATATACATATGTATTATTTAATTCTCTCTAAATTTAAATTTAATGTTTTAAGAAAAAATCTCTCTACATTTAATGTATAATTTTCAGAGGTTGGTGGAGGATGAAAATGAAGAGCAGCCAAATCAAGATCTCAGAAGCAGAGGGCTGTGTTTGGTTCCATTGGGATGCTTGTCCTACGTGACCGGCGACGGCGGCGGCGCCGCCGGAATTTGGCCTCCGCCGGGGTTTAATGGAGGAACGTCTTATTGATAAATATTTTTTTATTAAGGACTAATTAAGGTTCTATGAATTAATTAATGGAGCAAATTTGGTCAGTCTGTTTAATTCAATGGAGAGTGAGATACAGAAATGGACCAAGTTTGATCCATTAATATTTAATCAATTCATGTATTGTTATTGACTACACATTTTTATTTTTTGTTCTATCAATTATCCTATTGCCCTTCA

mRNA sequence

GAATAACCCCACGCTCTATCTTTCTTTCTTTTCAAGGCTACTTTACTAAGGCCTAAAGAAATTTAGAGAAAAATGAGGGGTCAAAATGCAAAATATGAATTGTACAACATGTTGCCTTTGTTTCAATGAATAACAGTTAGAACAAAGCAATTCTTGGTTGTGTGTGTGTTTCTTTGGTCTTTTATAATTACTTGGTTTTTTTTTTTTTTTGTAATTTTGATTCTTCTTGGGATTTTCAAGCTGCCTTTTTTTTTTGTTTATAAATATTTATTACTTATCAACTCCAAATCCTTGTGTGTATATGGAGTCTGCTGCTAATCTCCATCAGCTTCAAGACCAGCTTCTTGTTCCTTCTTCTTCTTCTTCTTTGCCCATTATTCCATCTTGTTTTGGCCTTGCAAACACTCATGGATGGACTCCAAATCTCTCTTTGAATAATAATAACACAAACAATTCAATGCTTCAAGATTTTGGCTTTCAATGGATCAGTTCTGAAAACTTGTTATCTCATTCTCTTCAAAACCCACAAGCTGAAAAATTCACAGAAATGTTGAACAACCCTTCATGTACAGATCAAGATTTGGATCTGAATGATCTCAGCCACAAGCTCTCGATCAAAATCAACGGTGGAGATTTCTACAACATTAACTCAAGATCAAATAATAATAGACCCCATTTTGCTCAAATTTACCCAAGTATTAATGTCTCTAATTGGAACCTCTCAACTCCGGCGCCGCCGCCGGCGTTCTCAAATTGCTTAGACTTGAACTTACAAACGCCGGCGGATTTGTTCGCCGCCGCCGGAAATTTTGGTTTTCACCATCAGATCCAACCAAGTAAAATGACACCTTTTACAAGTGAAGTAACTGAACCTAAACGATGTAACTCCACGGAACCAAGGATAAACCAACATTCTCCTCCTCTTAAAAAACCGCGATCGGACTCGCGCTCGCTTTGCCCGCCACTAAAGGTTAGAAAAGAGAAACTAGGTGATAGAATTGCAGCCCTTCAACAATTGGTAGCACCATTTGGAAAGACAGACACAGCATCTGTGTTAATGGAAGCCATTGGATACATAAAATTCCTTCAAAATCAGGTCGAGACCTTGAGTGTTCCATACATGAAACCCTCGTCTAAGCCGACACATCGGAGGTTGGTGGAGGATGAAAATGAAGAGCAGCCAAATCAAGATCTCAGAAGCAGAGGGCTGTGTTTGGTTCCATTGGGATGCTTGTCCTACGTGACCGGCGACGGCGGCGGCGCCGCCGGAATTTGGCCTCCGCCGGGGTTTAATGGAGGAACGTCTTATTGATAAATATTTTTTTATTAAGGACTAATTAAGGTTCTATGAATTAATTAATGGAGCAAATTTGGTCAGTCTGTTTAATTCAATGGAGAGTGAGATACAGAAATGGACCAAGTTTGATCCATTAATATTTAATCAATTCATGTATTGTTATTGACTACACATTTTTATTTTTTGTTCTATCAATTATCCTATTGCCCTTCA

Coding sequence (CDS)

ATGGAGTCTGCTGCTAATCTCCATCAGCTTCAAGACCAGCTTCTTGTTCCTTCTTCTTCTTCTTCTTTGCCCATTATTCCATCTTGTTTTGGCCTTGCAAACACTCATGGATGGACTCCAAATCTCTCTTTGAATAATAATAACACAAACAATTCAATGCTTCAAGATTTTGGCTTTCAATGGATCAGTTCTGAAAACTTGTTATCTCATTCTCTTCAAAACCCACAAGCTGAAAAATTCACAGAAATGTTGAACAACCCTTCATGTACAGATCAAGATTTGGATCTGAATGATCTCAGCCACAAGCTCTCGATCAAAATCAACGGTGGAGATTTCTACAACATTAACTCAAGATCAAATAATAATAGACCCCATTTTGCTCAAATTTACCCAAGTATTAATGTCTCTAATTGGAACCTCTCAACTCCGGCGCCGCCGCCGGCGTTCTCAAATTGCTTAGACTTGAACTTACAAACGCCGGCGGATTTGTTCGCCGCCGCCGGAAATTTTGGTTTTCACCATCAGATCCAACCAAGTAAAATGACACCTTTTACAAGTGAAGTAACTGAACCTAAACGATGTAACTCCACGGAACCAAGGATAAACCAACATTCTCCTCCTCTTAAAAAACCGCGATCGGACTCGCGCTCGCTTTGCCCGCCACTAAAGGTTAGAAAAGAGAAACTAGGTGATAGAATTGCAGCCCTTCAACAATTGGTAGCACCATTTGGAAAGACAGACACAGCATCTGTGTTAATGGAAGCCATTGGATACATAAAATTCCTTCAAAATCAGGTCGAGACCTTGAGTGTTCCATACATGAAACCCTCGTCTAAGCCGACACATCGGAGGTTGGTGGAGGATGAAAATGAAGAGCAGCCAAATCAAGATCTCAGAAGCAGAGGGCTGTGTTTGGTTCCATTGGGATGCTTGTCCTACGTGACCGGCGACGGCGGCGGCGCCGCCGGAATTTGGCCTCCGCCGGGGTTTAATGGAGGAACGTCTTATTGA

Protein sequence

MESAANLHQLQDQLLVPSSSSSLPIIPSCFGLANTHGWTPNLSLNNNNTNNSMLQDFGFQWISSENLLSHSLQNPQAEKFTEMLNNPSCTDQDLDLNDLSHKLSIKINGGDFYNINSRSNNNRPHFAQIYPSINVSNWNLSTPAPPPAFSNCLDLNLQTPADLFAAAGNFGFHHQIQPSKMTPFTSEVTEPKRCNSTEPRINQHSPPLKKPRSDSRSLCPPLKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPYMKPSSKPTHRRLVEDENEEQPNQDLRSRGLCLVPLGCLSYVTGDGGGAAGIWPPPGFNGGTSY

Homology

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BLAST of Sed0025638 vs. NCBI nr
Match: XP_022142259.1 (transcription factor bHLH110 isoform X1 [Momordica charantia])

HSP 1 Score: 416.8 bits (1070), Expect = 1.8e-112
Identity = 265/448 (59.15%), Postives = 284/448 (63.39%), Query Frame = 0


Query: 1   MESAANL----HQLQDQLLVP----SSSSSLPIIPSCFGLANTHGWTPNLSLN------- 60
           MESAANL    HQLQDQLL+P    SSSSSLP+IPS FGL  +HGWTPN+SLN       
Sbjct: 1   MESAANLHHHQHQLQDQLLLPSSSSSSSSSLPVIPSYFGLGTSHGWTPNISLNTCNYNPR 60

Query: 61  ----------------NNNT----NNSMLQDFG-FQWISSENLLSHS--LQNPQA----- 120
                            NNT    N+SM+QD G FQW S  N    S    +PQ      
Sbjct: 61  IFNNGATSIPIRDCGQKNNTSPPLNSSMVQDLGLFQWSSGVNSSGSSFLFHDPQGGKIKE 120

Query: 121 ------------EKFTEMLNN---PSCTDQDL--------------DLNDLSHKLSIK-- 180
                        KFTEMLNN   PSCT+QD               DLNDLSHKL IK  
Sbjct: 121 EISSLASAAESFPKFTEMLNNNNSPSCTNQDFDHLKNTNSNDSPAEDLNDLSHKLLIKTL 180

Query: 181 ------INGGDFYN-------INSRSNNNRPHFAQIYPSINVSNWNLSTPAPPPAFSNCL 240
                 I+GGD            + S  NR HFAQIYPSINVSNWNLS+PAPP  FSN L
Sbjct: 181 ISSGCQIDGGDHIKPGGHLLYSTTTSRPNRGHFAQIYPSINVSNWNLSSPAPP--FSNSL 240

Query: 241 DLNLQTPADLFAAAG--------NFG--------FHHQIQ-----PSKMTPFTSEVTEPK 300
           DLNLQTPAD+ AA+         NFG        +H  I      PSKMTPF+SEVTE K
Sbjct: 241 DLNLQTPADMLAASAGKFSHSQDNFGIFRETLPDYHDHIPSVPCIPSKMTPFSSEVTEAK 300

Query: 301 R-CNSTEPRINQHSPPLKKPRSDSRSLCPPLKVRKEKLGDRIAALQQLVAPFGKTDTASV 336
           R CNS EPR+NQ  PP KK R DSR+ CPP KVRKEKLGDRIAALQQLVAPFGKTDTASV
Sbjct: 301 RPCNSMEPRVNQQPPPSKKTRLDSRASCPPFKVRKEKLGDRIAALQQLVAPFGKTDTASV 360

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BLAST of Sed0025638 vs. NCBI nr
Match: KAG7024182.1 (Transcription factor bHLH [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 414.8 bits (1065), Expect = 6.9e-112
Identity = 249/423 (58.87%), Postives = 281/423 (66.43%), Query Frame = 0


Query: 1   MESAANLHQLQDQLLVP---SSSSSLPIIPSCFGLANTHGWTPNLSLNNN---------- 60
           M+SAANLHQLQ+QLLVP   SSSSSLP++ SC GL ++HGWTPN+S NNN          
Sbjct: 1   MDSAANLHQLQEQLLVPSSCSSSSSLPVVSSCLGLGSSHGWTPNVSPNNNSCNYNPRIFN 60

Query: 61  --------------NTN-NSMLQDFGFQW---ISSENLLSHSLQNPQA----------EK 120
                         NTN +SMLQD GFQW   +++    + SL +PQA           K
Sbjct: 61  GFTSFPSRSDCGQKNTNSSSMLQDLGFQWSGAVNTGTFFTQSLHDPQAGKIKDEISSFPK 120

Query: 121 FTEMLNNPSCTDQDL-----------------DLNDLSHKLSIK--INGGDFYNINSRSN 180
           FT++LNNPS T+QD                  DLNDL++KL IK  I+ G   N    + 
Sbjct: 121 FTQILNNPSSTNQDFHHFPSTNQVKNNSNNDSDLNDLTNKLLIKTLISSGCQINGGDPTK 180

Query: 181 NNRPHFAQIYPSINVSNWNLSTPAPPPAFSNCLDLNLQTPADLFAAAGNFG--------- 240
            NRPHF QIYPSINVSNWNLS+PA  PAFSN LDLNLQTPAD+  +A NF          
Sbjct: 181 PNRPHFPQIYPSINVSNWNLSSPA--PAFSNSLDLNLQTPADMLLSAANFSHSPDSFGSF 240

Query: 241 ------FHHQIQ---------PSKMTPFTSEVTEPKR-CNSTEPRINQHSPPLKKPRSDS 300
                 F  Q+          P+K  PF++E TEPKR CNS EP +NQ SPPLKK R DS
Sbjct: 241 KQTLSDFQDQMPPPPASLPCIPNKRKPFSTEATEPKRPCNSMEPSLNQQSPPLKKSRLDS 300

Query: 301 RSLCPPLKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPYMK 335
           R+ CPP KVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPYMK
Sbjct: 301 RASCPPFKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPYMK 360

[Close]

BLAST of Sed0025638 vs. NCBI nr
Match: XP_023534953.1 (transcription factor bHLH110 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 414.5 bits (1064), Expect = 9.0e-112
Identity = 249/423 (58.87%), Postives = 281/423 (66.43%), Query Frame = 0


Query: 1   MESAANLHQLQDQLLVP---SSSSSLPIIPSCFGLANTHGWTPNLSLNNN---------- 60
           M+SAANLHQLQ+QLLVP   SSSSSLP++ SC GL ++HGWTPN+S NNN          
Sbjct: 1   MDSAANLHQLQEQLLVPSSSSSSSSLPVVSSCLGLGSSHGWTPNVSPNNNSCNYNPRIFN 60

Query: 61  --------------NTN-NSMLQDFGFQW---ISSENLLSHSLQNPQA----------EK 120
                         NTN +SMLQD GFQW   +++    + SL +PQA           K
Sbjct: 61  GFASFPSRSDCGQKNTNSSSMLQDLGFQWSGAVNTGTFFTQSLHDPQAGKIKDEISSFPK 120

Query: 121 FTEMLNNPSCTDQDL-----------------DLNDLSHKLSIK--INGGDFYNINSRSN 180
           FT++LNNPS T+QD                  DLNDL++KL IK  I+ G   N    + 
Sbjct: 121 FTQILNNPSSTNQDFHHFPSTNQVKNNSNNDSDLNDLTNKLLIKTLISSGCQINGGDPTK 180

Query: 181 NNRPHFAQIYPSINVSNWNLSTPAPPPAFSNCLDLNLQTPADLFAAAGNFG--------- 240
            NRPHF QIYPSINVSNWNLS+PA  PAFSN LDLNLQTPAD+  +A NF          
Sbjct: 181 PNRPHFPQIYPSINVSNWNLSSPA--PAFSNSLDLNLQTPADMLLSAANFSHSPDSFGSF 240

Query: 241 ------FHHQIQ---------PSKMTPFTSEVTEPKR-CNSTEPRINQHSPPLKKPRSDS 300
                 F  Q+          P+K  PF++E TEPKR CNS EP +NQ SPPLKK R DS
Sbjct: 241 KQTLSDFQDQMHPPPASLPCIPNKRKPFSTEATEPKRPCNSMEPSLNQQSPPLKKSRLDS 300

Query: 301 RSLCPPLKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPYMK 335
           R+ CPP KVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPYMK
Sbjct: 301 RASCPPFKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPYMK 360

[Close]

BLAST of Sed0025638 vs. NCBI nr
Match: KAG6591297.1 (Transcription factor basic helix-loop-helix 110, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 411.8 bits (1057), Expect = 5.8e-111
Identity = 248/423 (58.63%), Postives = 280/423 (66.19%), Query Frame = 0


Query: 1   MESAANLHQLQDQLLVP---SSSSSLPIIPSCFGLANTHGWTPNLSLNNN---------- 60
           M+SAANLHQLQ+QLLVP   SSSSSLP++ SC GL ++HGWTPN+S NNN          
Sbjct: 1   MDSAANLHQLQEQLLVPSSCSSSSSLPVVSSCLGLGSSHGWTPNVSPNNNSCNYNPRIFN 60

Query: 61  --------------NTN-NSMLQDFGFQW---ISSENLLSHSLQNPQA----------EK 120
                         NTN +SMLQD GFQW   +++    + SL +PQA           K
Sbjct: 61  GFTSFPSRSDCGQKNTNSSSMLQDLGFQWSGAVNTGTFFTQSLHDPQAGKIKDEISSFPK 120

Query: 121 FTEMLNNPSCTDQDL-----------------DLNDLSHKLSIK--INGGDFYNINSRSN 180
           FT++LNNPS T+QD                  DLNDL++KL IK  I+ G   N    + 
Sbjct: 121 FTQILNNPSSTNQDFHHFPSTNQVKNNSNNDSDLNDLTNKLLIKTLISSGCQINGGDPTK 180

Query: 181 NNRPHFAQIYPSINVSNWNLSTPAPPPAFSNCLDLNLQTPADLFAAAGNFG--------- 240
            NRPHF QIYPSINVSNWNLS+PA  PAFSN LDLNLQTPAD+  +A NF          
Sbjct: 181 LNRPHFPQIYPSINVSNWNLSSPA--PAFSNSLDLNLQTPADMLLSAANFSHSPDSFGSF 240

Query: 241 ------FHHQIQ---------PSKMTPFTSEVTEPKR-CNSTEPRINQHSPPLKKPRSDS 300
                 F  Q+          P+K   F++E TEPKR CNS EP +NQ SPPLKK R DS
Sbjct: 241 KQTLSDFQDQMHPPPASLPCIPNKRKSFSTEATEPKRPCNSMEPSLNQQSPPLKKSRLDS 300

Query: 301 RSLCPPLKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPYMK 335
           R+ CPP KVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPYMK
Sbjct: 301 RASCPPFKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPYMK 360

[Close]

BLAST of Sed0025638 vs. NCBI nr
Match: XP_022935808.1 (transcription factor bHLH110-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 409.1 bits (1050), Expect = 3.8e-110
Identity = 247/423 (58.39%), Postives = 279/423 (65.96%), Query Frame = 0


Query: 1   MESAANLHQLQDQLLVP---SSSSSLPIIPSCFGLANTHGWTPNLSLNNN---------- 60
           M+SAANLHQLQ+QLLVP   SSSSSLP++ SC GL ++HGWTPN+S NNN          
Sbjct: 1   MDSAANLHQLQEQLLVPSSCSSSSSLPVVSSCLGLGSSHGWTPNVSPNNNSCNYNPRIFN 60

Query: 61  --------------NTN-NSMLQDFGFQW---ISSENLLSHSLQNPQA----------EK 120
                         NTN +S LQD GFQW   +++    + SL +PQA           K
Sbjct: 61  GFTSFPSRSDCGQKNTNSSSTLQDLGFQWSGAVNTGTFFTQSLHDPQAGKIKDEISSFPK 120

Query: 121 FTEMLNNPSCTDQDL-----------------DLNDLSHKLSIK--INGGDFYNINSRSN 180
           FT++LNNPS T+QD                  DLNDL++KL IK  I+ G   N    + 
Sbjct: 121 FTQILNNPSSTNQDFHHFPSTNQVKNNSNNDSDLNDLTNKLLIKTLISSGCQINGADPTK 180

Query: 181 NNRPHFAQIYPSINVSNWNLSTPAPPPAFSNCLDLNLQTPADLFAAAGNFG--------- 240
            NRPHF QIYPSINVSNWNLS+PA  PAFS+ LDLNLQTPAD+  +A NF          
Sbjct: 181 LNRPHFPQIYPSINVSNWNLSSPA--PAFSDSLDLNLQTPADMLLSAANFSHSPDSFGSF 240

Query: 241 ------FHHQIQ---------PSKMTPFTSEVTEPKR-CNSTEPRINQHSPPLKKPRSDS 300
                 F  Q+          P+K  PF +E TEPKR CNS EP +NQ SPPLKK R DS
Sbjct: 241 KQTLSDFQDQMHPPPASLPCIPNKRKPFCTEATEPKRPCNSMEPSLNQQSPPLKKSRLDS 300

Query: 301 RSLCPPLKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPYMK 335
           R+ CPP KVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPYMK
Sbjct: 301 RASCPPFKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPYMK 360

[Close]

BLAST of Sed0025638 vs. ExPASy Swiss-Prot
Match: Q9SFZ3 (Transcription factor bHLH110 OS=Arabidopsis thaliana OX=3702 GN=BHLH110 PE=2 SV=2)

HSP 1 Score: 221.5 bits (563), Expect = 1.5e-56
Identity = 181/453 (39.96%), Postives = 233/453 (51.43%), Query Frame = 0


Query: 4   AANLHQLQDQL-LVPSSSSSLPI----IPSCFGLANTHGWTP------NLSL-------- 63
           +ANLHQLQDQL LV SSSSS  +     PSC+G ++ H W+P      ++SL        
Sbjct: 3   SANLHQLQDQLQLVGSSSSSSSLDNNSDPSCYGASSAHQWSPGGISLNSVSLSHNYNNEM 62

Query: 64  ------NNNNTNNS---------------MLQDFGFQWIS--------------SENLLS 123
                 NNNN NN+                 QDF  QW                 E L S
Sbjct: 63  LNTRAHNNNNNNNTSECMSLSSIHNHSLIQQQDFPLQWPHDQSSYQHHEGLLKIKEELSS 122

Query: 124 HSLQNPQ--AEKFTEMLNNPSCTDQDLDLN---DLSHKLSIK-------INGGDFYNINS 183
            ++ + Q    KFT+MLN+P  T+  L +N   D + KL +K       ING    ++ S
Sbjct: 123 STISDHQEGISKFTDMLNSPVITNY-LKINEHKDYTEKLLLKSMSSGFPINGDYGSSLPS 182

Query: 184 RSNNNRP-------HFAQIYPSINVSNWNLSTPAPPPAFSNC---LDLNLQT-------- 243
            S+++ P       +F+QIYPS+N+S+ + S        SN     D+N+Q         
Sbjct: 183 SSSSSSPSSQSHRGNFSQIYPSVNISSLSESRKMSMDDMSNISRPFDINMQVFDGRLFEG 242

Query: 244 -------PADLFAAAG-------NFG--FHHQIQPSKMTPFTSEVTEPKRCNSTEPRINQ 303
                   A   ++ G       +FG  FHH +Q + +   +S  T      S EP+ ++
Sbjct: 243 NVLVPPFNAQEISSLGMSRGSLPSFGLPFHHHLQQT-LPHLSSSPTHQMEMFSNEPQTSE 302

Query: 304 ------------HSPPLKKPRSDSRSLCPPLKVRKEKLGDRIAALQQLVAPFGKTDTASV 335
                            KKPR +SRS CPP KVRKEKLGDRIAALQQLV+PFGKTDTASV
Sbjct: 303 GKRHNFLMATKAGENASKKPRVESRSSCPPFKVRKEKLGDRIAALQQLVSPFGKTDTASV 362

[Close]

BLAST of Sed0025638 vs. ExPASy Swiss-Prot
Match: Q8GXT3 (Transcription factor bHLH123 OS=Arabidopsis thaliana OX=3702 GN=BHLH123 PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.9e-25
Identity = 96/237 (40.51%), Postives = 119/237 (50.21%), Query Frame = 0


Query: 113 YNINSRSNNNRPHFAQIYPSINVSNWNLSTPAPPPAFSNCLDLNLQTPADLF--AAAGNF 172
           Y+    S  N    A   P    S W L +  PP   S    L     A  +  AAAGN 
Sbjct: 223 YSQFGSSTGNYDQMASALP----STWFLRSSPPPKPHS---PLRFSNNATFWNPAAAGNA 282

Query: 173 G----------FHHQIQPSKMTPFT-----SEVTEPKRCNSTEPRI--NQHSPPLKKPRS 232
           G          F   +QP ++ P +       ++E +  +S E +   N H P  K+ +S
Sbjct: 283 GAPPPHDASSNFFPALQPPQIHPQSFDEQPKNISEIRDSSSNEVKRGGNDHQPAAKRAKS 342

Query: 233 DSRSLCPPLKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPY 292
           ++ S  P  K RKEK+GDRIAALQQLV+PFGKTD ASVL EAI YIKFL  QV  LS PY
Sbjct: 343 EAASPSPAFK-RKEKMGDRIAALQQLVSPFGKTDAASVLSEAIEYIKFLHQQVSALSNPY 402

Query: 293 MKPSSKPTHRR---LVEDENEEQPNQDLRSRGLCLVPLGCLSYVTGDGGGAAGIWPP 328
           MK  +   H++     E E  E+P  DLRSRGLCLVP+     VT D       W P
Sbjct: 403 MKSGASLQHQQSDHSTELEVSEEP--DLRSRGLCLVPVSSTFPVTHD--TTVDFWTP 447

[Close]

BLAST of Sed0025638 vs. ExPASy Swiss-Prot
Match: Q8S3D1 (Transcription factor bHLH68 OS=Arabidopsis thaliana OX=3702 GN=BHLH68 PE=1 SV=2)

HSP 1 Score: 111.7 bits (278), Expect = 1.6e-23
Identity = 90/241 (37.34%), Postives = 114/241 (47.30%), Query Frame = 0


Query: 134 NVSNWN---LSTPAPPPAFS----------NCLDLNLQTPADLFAAAGNFGFHHQIQPSK 193
           N++N N   +S+P  PP  S          N  D N+    ++   + N    H  +   
Sbjct: 169 NINNNNGYVISSPNSPPNKSCVTTTTTTSLNSNDDNINNNNNMLDFSSNHNGLHLSEGRH 228

Query: 194 MTPFTSEVTEPKRCNSTEPRINQHSPPLKKPRSDSRSLCPPLKVRKEKLGDRIAALQQLV 253
             P  S       CNS E   + +  P  +P   S+S    LKVRKEKLG RIAAL QLV
Sbjct: 229 TPPDRS-----SECNSLEIGGSTNKKPRLQPSPSSQS---TLKVRKEKLGGRIAALHQLV 288

Query: 254 APFGKTDTASVLMEAIGYIKFLQNQVETLSVPYMKPSSKPTHR----------------- 313
           +PFGKTDTASVL EAIGYI+FLQ+Q+E LS PY   ++    R                 
Sbjct: 289 SPFGKTDTASVLSEAIGYIRFLQSQIEALSHPYFGTTASGNMRHQQHLQGDRSCIFPEDP 348

Query: 314 -RLVEDE----------------NEEQPNQDLRSRGLCLVPLGCLSYVTGDGGGAAGIWP 328
            +LV D+                  E+P +DLRSRGLCLVP+ C   V  D G  A  W 
Sbjct: 349 GQLVNDQCMKRRGASSSSTDNQNASEEPKKDLRSRGLCLVPISCTLQVGSDNG--ADYWA 399

[Close]

BLAST of Sed0025638 vs. ExPASy Swiss-Prot
Match: Q7XHI5 (Transcription factor bHLH133 OS=Arabidopsis thaliana OX=3702 GN=BHLH133 PE=1 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 9.0e-22
Identity = 73/168 (43.45%), Postives = 88/168 (52.38%), Query Frame = 0


Query: 194 CNSTEPRINQHSPPLKKPRSDSRSLCPPLKVRKEKLGDRIAALQQLVAPFGKTDTASVLM 253
           CNS+E  +   S   KKP+    S    LKVRKEKLG RIA+L QLV+PFGKTDTASVL 
Sbjct: 192 CNSSE--MIGSSFANKKPKLQVPSSQSTLKVRKEKLGGRIASLHQLVSPFGKTDTASVLS 251

Query: 254 EAIGYIKFLQNQVETLSVPYMKPSSKPT--HRRLVEDEN--------------------- 313
           EAIGYI+FL +Q+E LS+PY    S+    H+    + N                     
Sbjct: 252 EAIGYIRFLHSQIEALSLPYFGTPSRNNMMHQHAQRNMNGIFPEDPGQLVNEYCMKRGVS 311

Query: 314 -----------EEQPNQDLRSRGLCLVPLGCLSYVTGDGGGAAGIWPP 328
                       E+P +DLRSRGLCLVP+ C   V  D G  A  W P
Sbjct: 312 LSSTDNQKSNPNEEPMKDLRSRGLCLVPISCTLQVGSDNG--ADYWAP 355

[Close]

BLAST of Sed0025638 vs. ExPASy Swiss-Prot
Match: Q94JL3 (Transcription factor bHLH112 OS=Arabidopsis thaliana OX=3702 GN=BHLH112 PE=1 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.2e-21
Identity = 95/287 (33.10%), Postives = 133/287 (46.34%), Query Frame = 0


Query: 44  LNNNNTNNSMLQDFGFQWISSENLLSHSLQNPQAEKFTEMLNNPSCTDQDLDLNDLSHKL 103
           LN++   +S  QD G  ++S+    S  + NP         ++ S      D     +  
Sbjct: 112 LNSSFIRSSQDQDHGQGFLSTTT--SPYILNPACSSSPSTSSSSSLIRTFYDPEPSPYNF 171

Query: 104 SIKINGGDFYNINSRSNNNRPHFAQIYPSINVSNWNLSTPAPPPAFSNCLDLNLQTPADL 163
               +G       S +N   PH    Y  IN S  N +   P    S+  +LN  TP+  
Sbjct: 172 VSTTSGSINDPQLSWANKTNPHHQVAYGLIN-SFSNNANSRPFWNSSSTTNLNNTTPS-- 231

Query: 164 FAAAGNFGFHHQIQPSKMTPFTSEVTEPKRCNSTEPRINQHSPPLKKPRSDSRSLCPPLK 223
                NF    QI  +++   T  +    +  S + R   +    KKPR  + S  P  K
Sbjct: 232 -----NFVTTPQIISTRLEDKTKNLKTRAQSESLK-RAKDNESAAKKPRVTTPSPLPTFK 291

Query: 224 VRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPYMKPSSKPTHR 283
           VRKE L D+I +LQQLV+PFGKTDTASVL EAI YIKFL +QV  LS PYMK  +    +
Sbjct: 292 VRKENLRDQITSLQQLVSPFGKTDTASVLQEAIEYIKFLHDQVTVLSTPYMKQGASNQQQ 351

Query: 284 RLVEDEN---EEQPNQDLRSRGLCLVPLGCLSYVTGDGGGAAGIWPP 328
           + +  ++   +E  N +LR  GLCLVP+     V  +    A  W P
Sbjct: 352 QQISGKSKSQDENENHELRGHGLCLVPISSTFPVANE--TTADFWTP 385

[Close]

BLAST of Sed0025638 vs. ExPASy TrEMBL
Match: A0A6J1CL27 (transcription factor bHLH110 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111012391 PE=4 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 8.8e-113
Identity = 265/448 (59.15%), Postives = 284/448 (63.39%), Query Frame = 0


Query: 1   MESAANL----HQLQDQLLVP----SSSSSLPIIPSCFGLANTHGWTPNLSLN------- 60
           MESAANL    HQLQDQLL+P    SSSSSLP+IPS FGL  +HGWTPN+SLN       
Sbjct: 1   MESAANLHHHQHQLQDQLLLPSSSSSSSSSLPVIPSYFGLGTSHGWTPNISLNTCNYNPR 60

Query: 61  ----------------NNNT----NNSMLQDFG-FQWISSENLLSHS--LQNPQA----- 120
                            NNT    N+SM+QD G FQW S  N    S    +PQ      
Sbjct: 61  IFNNGATSIPIRDCGQKNNTSPPLNSSMVQDLGLFQWSSGVNSSGSSFLFHDPQGGKIKE 120

Query: 121 ------------EKFTEMLNN---PSCTDQDL--------------DLNDLSHKLSIK-- 180
                        KFTEMLNN   PSCT+QD               DLNDLSHKL IK  
Sbjct: 121 EISSLASAAESFPKFTEMLNNNNSPSCTNQDFDHLKNTNSNDSPAEDLNDLSHKLLIKTL 180

Query: 181 ------INGGDFYN-------INSRSNNNRPHFAQIYPSINVSNWNLSTPAPPPAFSNCL 240
                 I+GGD            + S  NR HFAQIYPSINVSNWNLS+PAPP  FSN L
Sbjct: 181 ISSGCQIDGGDHIKPGGHLLYSTTTSRPNRGHFAQIYPSINVSNWNLSSPAPP--FSNSL 240

Query: 241 DLNLQTPADLFAAAG--------NFG--------FHHQIQ-----PSKMTPFTSEVTEPK 300
           DLNLQTPAD+ AA+         NFG        +H  I      PSKMTPF+SEVTE K
Sbjct: 241 DLNLQTPADMLAASAGKFSHSQDNFGIFRETLPDYHDHIPSVPCIPSKMTPFSSEVTEAK 300

Query: 301 R-CNSTEPRINQHSPPLKKPRSDSRSLCPPLKVRKEKLGDRIAALQQLVAPFGKTDTASV 336
           R CNS EPR+NQ  PP KK R DSR+ CPP KVRKEKLGDRIAALQQLVAPFGKTDTASV
Sbjct: 301 RPCNSMEPRVNQQPPPSKKTRLDSRASCPPFKVRKEKLGDRIAALQQLVAPFGKTDTASV 360

[Close]

BLAST of Sed0025638 vs. ExPASy TrEMBL
Match: A0A6J1FBJ5 (transcription factor bHLH110-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442607 PE=4 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 1.8e-110
Identity = 247/423 (58.39%), Postives = 279/423 (65.96%), Query Frame = 0


Query: 1   MESAANLHQLQDQLLVP---SSSSSLPIIPSCFGLANTHGWTPNLSLNNN---------- 60
           M+SAANLHQLQ+QLLVP   SSSSSLP++ SC GL ++HGWTPN+S NNN          
Sbjct: 1   MDSAANLHQLQEQLLVPSSCSSSSSLPVVSSCLGLGSSHGWTPNVSPNNNSCNYNPRIFN 60

Query: 61  --------------NTN-NSMLQDFGFQW---ISSENLLSHSLQNPQA----------EK 120
                         NTN +S LQD GFQW   +++    + SL +PQA           K
Sbjct: 61  GFTSFPSRSDCGQKNTNSSSTLQDLGFQWSGAVNTGTFFTQSLHDPQAGKIKDEISSFPK 120

Query: 121 FTEMLNNPSCTDQDL-----------------DLNDLSHKLSIK--INGGDFYNINSRSN 180
           FT++LNNPS T+QD                  DLNDL++KL IK  I+ G   N    + 
Sbjct: 121 FTQILNNPSSTNQDFHHFPSTNQVKNNSNNDSDLNDLTNKLLIKTLISSGCQINGADPTK 180

Query: 181 NNRPHFAQIYPSINVSNWNLSTPAPPPAFSNCLDLNLQTPADLFAAAGNFG--------- 240
            NRPHF QIYPSINVSNWNLS+PA  PAFS+ LDLNLQTPAD+  +A NF          
Sbjct: 181 LNRPHFPQIYPSINVSNWNLSSPA--PAFSDSLDLNLQTPADMLLSAANFSHSPDSFGSF 240

Query: 241 ------FHHQIQ---------PSKMTPFTSEVTEPKR-CNSTEPRINQHSPPLKKPRSDS 300
                 F  Q+          P+K  PF +E TEPKR CNS EP +NQ SPPLKK R DS
Sbjct: 241 KQTLSDFQDQMHPPPASLPCIPNKRKPFCTEATEPKRPCNSMEPSLNQQSPPLKKSRLDS 300

Query: 301 RSLCPPLKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPYMK 335
           R+ CPP KVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPYMK
Sbjct: 301 RASCPPFKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPYMK 360

[Close]

BLAST of Sed0025638 vs. ExPASy TrEMBL
Match: A0A6J1CLA6 (transcription factor bHLH110 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111012391 PE=4 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 3.1e-110
Identity = 263/448 (58.71%), Postives = 282/448 (62.95%), Query Frame = 0


Query: 1   MESAANL----HQLQDQLLVP----SSSSSLPIIPSCFGLANTHGWTPNLSLN------- 60
           MESAANL    HQLQDQLL+P    SSSSSLP+IPS FGL  +HGWTPN+SLN       
Sbjct: 1   MESAANLHHHQHQLQDQLLLPSSSSSSSSSLPVIPSYFGLGTSHGWTPNISLNTCNYNPR 60

Query: 61  ----------------NNNT----NNSMLQDFG-FQWISSENLLSHS--LQNPQA----- 120
                            NNT    N+SM+QD G FQW S  N    S    +PQ      
Sbjct: 61  IFNNGATSIPIRDCGQKNNTSPPLNSSMVQDLGLFQWSSGVNSSGSSFLFHDPQGGKIKE 120

Query: 121 ------------EKFTEMLNN---PSCTDQDL--------------DLNDLSHKLSIK-- 180
                        KFTEMLNN   PSCT+QD               DLNDLSHKL IK  
Sbjct: 121 EISSLASAAESFPKFTEMLNNNNSPSCTNQDFDHLKNTNSNDSPAEDLNDLSHKLLIKTL 180

Query: 181 ------INGGDFYN-------INSRSNNNRPHFAQIYPSINVSNWNLSTPAPPPAFSNCL 240
                 I+GGD            + S  NR HFAQIYPSINVSNWNLS+PAPP  FSN L
Sbjct: 181 ISSGCQIDGGDHIKPGGHLLYSTTTSRPNRGHFAQIYPSINVSNWNLSSPAPP--FSNSL 240

Query: 241 DLNLQTPADLFAAAG--------NFG--------FHHQIQ-----PSKMTPFTSEVTEPK 300
           DLNLQTPAD+ AA+         NFG        +H  I      PSKMTPF+SEVTE K
Sbjct: 241 DLNLQTPADMLAASAGKFSHSQDNFGIFRETLPDYHDHIPSVPCIPSKMTPFSSEVTEAK 300

Query: 301 R-CNSTEPRINQHSPPLKKPRSDSRSLCPPLKVRKEKLGDRIAALQQLVAPFGKTDTASV 336
           R CNS EPR+NQ  PP KK R DSR+ CPP KVRKEKLGDRIAALQQLVAPFGKTDTASV
Sbjct: 301 RPCNSMEPRVNQQPPPSKKTRLDSRASCPPFKVRKEKLGDRIAALQQLVAPFGKTDTASV 360

[Close]

BLAST of Sed0025638 vs. ExPASy TrEMBL
Match: A0A6J1IEG2 (transcription factor bHLH110-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111474977 PE=4 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 1.5e-109
Identity = 247/425 (58.12%), Postives = 279/425 (65.65%), Query Frame = 0


Query: 1   MESAANLHQLQDQLLVP-----SSSSSLPIIPSCFGLANTHGWTPNLSLNNN-------- 60
           M+SAANLHQLQ+QLLVP     SSSSSLP+I SC GL ++HGWTPN+S N+N        
Sbjct: 1   MDSAANLHQLQEQLLVPSSSSSSSSSSLPVISSCLGLGSSHGWTPNVSPNSNSCNYNPRI 60

Query: 61  ----------------NTN-NSMLQDFGFQW---ISSENLLSHSLQNPQA---------- 120
                           NTN +SMLQD GFQW   +++    + SL +PQA          
Sbjct: 61  FNGFTSCPSRSDCGQKNTNSSSMLQDLGFQWSGAVNTGTFFTQSLHDPQAGKIKDEISSF 120

Query: 121 EKFTEMLNNPSCTDQDL-----------------DLNDLSHKLSIK--INGGDFYNINSR 180
            KFT++LNNPS T+QD                  DLNDL++KL IK  I+ G   N    
Sbjct: 121 PKFTQILNNPSSTNQDFHHFPSTNQVKNNSNNDSDLNDLTNKLLIKTLISSGCQINGGDP 180

Query: 181 SNNNRPHFAQIYPSINVSNWNLSTPAPPPAFSNCLDLNLQTPADLFAAAGNFG------- 240
           +  NRPHFAQIYPSINVSNWNLS+PA  PAFSN LDLNLQTPAD+  +A NF        
Sbjct: 181 TKPNRPHFAQIYPSINVSNWNLSSPA--PAFSNSLDLNLQTPADMLLSAANFSHSPDSFG 240

Query: 241 --------FHHQIQ---------PSKMTPFTSEVTEPKR-CNSTEPRINQHSPPLKKPRS 300
                   F  Q+          P+K  PF++E TEPKR CNS E  +NQ SPP KK R 
Sbjct: 241 SFKQTLSDFQDQMHPPPASLPCIPNKRKPFSTEATEPKRPCNSMESSLNQQSPPPKKSRL 300

Query: 301 DSRSLCPPLKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPY 335
           DSR+ CPP KVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPY
Sbjct: 301 DSRASCPPFKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPY 360

[Close]

BLAST of Sed0025638 vs. ExPASy TrEMBL
Match: A0A6J1F6H0 (transcription factor bHLH110-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111442607 PE=4 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 6.5e-108
Identity = 245/423 (57.92%), Postives = 277/423 (65.48%), Query Frame = 0


Query: 1   MESAANLHQLQDQLLVP---SSSSSLPIIPSCFGLANTHGWTPNLSLNNN---------- 60
           M+SAANLHQLQ+QLLVP   SSSSSLP++ SC GL ++HGWTPN+S NNN          
Sbjct: 1   MDSAANLHQLQEQLLVPSSCSSSSSLPVVSSCLGLGSSHGWTPNVSPNNNSCNYNPRIFN 60

Query: 61  --------------NTN-NSMLQDFGFQW---ISSENLLSHSLQNPQA----------EK 120
                         NTN +S LQD GFQW   +++    + SL +PQA           K
Sbjct: 61  GFTSFPSRSDCGQKNTNSSSTLQDLGFQWSGAVNTGTFFTQSLHDPQAGKIKDEISSFPK 120

Query: 121 FTEMLNNPSCTDQDL-----------------DLNDLSHKLSIK--INGGDFYNINSRSN 180
           FT++LNNPS T+QD                  DLNDL++KL IK  I+ G   N    + 
Sbjct: 121 FTQILNNPSSTNQDFHHFPSTNQVKNNSNNDSDLNDLTNKLLIKTLISSGCQINGADPTK 180

Query: 181 NNRPHFAQIYPSINVSNWNLSTPAPPPAFSNCLDLNLQTPADLFAAAGNFG--------- 240
            NRPHF QIYPSINVSNWNLS+PA  PAFS+ LDLNLQTPAD+  +A NF          
Sbjct: 181 LNRPHFPQIYPSINVSNWNLSSPA--PAFSDSLDLNLQTPADMLLSAANFSHSPDSFGSF 240

Query: 241 ------FHHQIQ---------PSKMTPFTSEVTEPKR-CNSTEPRINQHSPPLKKPRSDS 300
                 F  Q+          P+K  PF +E TEPKR CNS EP +NQ SPPLKK R DS
Sbjct: 241 KQTLSDFQDQMHPPPASLPCIPNKRKPFCTEATEPKRPCNSMEPSLNQQSPPLKKSRLDS 300

Query: 301 RSLCPPLKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPYMK 335
           R+ CPP KVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQ  TLSVPYMK
Sbjct: 301 RASCPPFKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQ--TLSVPYMK 360

[Close]

BLAST of Sed0025638 vs. TAIR 10
Match: AT1G27660.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 221.5 bits (563), Expect = 1.0e-57
Identity = 181/453 (39.96%), Postives = 233/453 (51.43%), Query Frame = 0


Query: 4   AANLHQLQDQL-LVPSSSSSLPI----IPSCFGLANTHGWTP------NLSL-------- 63
           +ANLHQLQDQL LV SSSSS  +     PSC+G ++ H W+P      ++SL        
Sbjct: 3   SANLHQLQDQLQLVGSSSSSSSLDNNSDPSCYGASSAHQWSPGGISLNSVSLSHNYNNEM 62

Query: 64  ------NNNNTNNS---------------MLQDFGFQWIS--------------SENLLS 123
                 NNNN NN+                 QDF  QW                 E L S
Sbjct: 63  LNTRAHNNNNNNNTSECMSLSSIHNHSLIQQQDFPLQWPHDQSSYQHHEGLLKIKEELSS 122

Query: 124 HSLQNPQ--AEKFTEMLNNPSCTDQDLDLN---DLSHKLSIK-------INGGDFYNINS 183
            ++ + Q    KFT+MLN+P  T+  L +N   D + KL +K       ING    ++ S
Sbjct: 123 STISDHQEGISKFTDMLNSPVITNY-LKINEHKDYTEKLLLKSMSSGFPINGDYGSSLPS 182

Query: 184 RSNNNRP-------HFAQIYPSINVSNWNLSTPAPPPAFSNC---LDLNLQT-------- 243
            S+++ P       +F+QIYPS+N+S+ + S        SN     D+N+Q         
Sbjct: 183 SSSSSSPSSQSHRGNFSQIYPSVNISSLSESRKMSMDDMSNISRPFDINMQVFDGRLFEG 242

Query: 244 -------PADLFAAAG-------NFG--FHHQIQPSKMTPFTSEVTEPKRCNSTEPRINQ 303
                   A   ++ G       +FG  FHH +Q + +   +S  T      S EP+ ++
Sbjct: 243 NVLVPPFNAQEISSLGMSRGSLPSFGLPFHHHLQQT-LPHLSSSPTHQMEMFSNEPQTSE 302

Query: 304 ------------HSPPLKKPRSDSRSLCPPLKVRKEKLGDRIAALQQLVAPFGKTDTASV 335
                            KKPR +SRS CPP KVRKEKLGDRIAALQQLV+PFGKTDTASV
Sbjct: 303 GKRHNFLMATKAGENASKKPRVESRSSCPPFKVRKEKLGDRIAALQQLVSPFGKTDTASV 362

[Close]

BLAST of Sed0025638 vs. TAIR 10
Match: AT3G20640.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 117.1 bits (292), Expect = 2.8e-26
Identity = 96/237 (40.51%), Postives = 119/237 (50.21%), Query Frame = 0


Query: 113 YNINSRSNNNRPHFAQIYPSINVSNWNLSTPAPPPAFSNCLDLNLQTPADLF--AAAGNF 172
           Y+    S  N    A   P    S W L +  PP   S    L     A  +  AAAGN 
Sbjct: 223 YSQFGSSTGNYDQMASALP----STWFLRSSPPPKPHS---PLRFSNNATFWNPAAAGNA 282

Query: 173 G----------FHHQIQPSKMTPFT-----SEVTEPKRCNSTEPRI--NQHSPPLKKPRS 232
           G          F   +QP ++ P +       ++E +  +S E +   N H P  K+ +S
Sbjct: 283 GAPPPHDASSNFFPALQPPQIHPQSFDEQPKNISEIRDSSSNEVKRGGNDHQPAAKRAKS 342

Query: 233 DSRSLCPPLKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPY 292
           ++ S  P  K RKEK+GDRIAALQQLV+PFGKTD ASVL EAI YIKFL  QV  LS PY
Sbjct: 343 EAASPSPAFK-RKEKMGDRIAALQQLVSPFGKTDAASVLSEAIEYIKFLHQQVSALSNPY 402

Query: 293 MKPSSKPTHRR---LVEDENEEQPNQDLRSRGLCLVPLGCLSYVTGDGGGAAGIWPP 328
           MK  +   H++     E E  E+P  DLRSRGLCLVP+     VT D       W P
Sbjct: 403 MKSGASLQHQQSDHSTELEVSEEP--DLRSRGLCLVPVSSTFPVTHD--TTVDFWTP 447

[Close]

BLAST of Sed0025638 vs. TAIR 10
Match: AT4G29100.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 111.7 bits (278), Expect = 1.2e-24
Identity = 90/241 (37.34%), Postives = 114/241 (47.30%), Query Frame = 0


Query: 134 NVSNWN---LSTPAPPPAFS----------NCLDLNLQTPADLFAAAGNFGFHHQIQPSK 193
           N++N N   +S+P  PP  S          N  D N+    ++   + N    H  +   
Sbjct: 169 NINNNNGYVISSPNSPPNKSCVTTTTTTSLNSNDDNINNNNNMLDFSSNHNGLHLSEGRH 228

Query: 194 MTPFTSEVTEPKRCNSTEPRINQHSPPLKKPRSDSRSLCPPLKVRKEKLGDRIAALQQLV 253
             P  S       CNS E   + +  P  +P   S+S    LKVRKEKLG RIAAL QLV
Sbjct: 229 TPPDRS-----SECNSLEIGGSTNKKPRLQPSPSSQS---TLKVRKEKLGGRIAALHQLV 288

Query: 254 APFGKTDTASVLMEAIGYIKFLQNQVETLSVPYMKPSSKPTHR----------------- 313
           +PFGKTDTASVL EAIGYI+FLQ+Q+E LS PY   ++    R                 
Sbjct: 289 SPFGKTDTASVLSEAIGYIRFLQSQIEALSHPYFGTTASGNMRHQQHLQGDRSCIFPEDP 348

Query: 314 -RLVEDE----------------NEEQPNQDLRSRGLCLVPLGCLSYVTGDGGGAAGIWP 328
            +LV D+                  E+P +DLRSRGLCLVP+ C   V  D G  A  W 
Sbjct: 349 GQLVNDQCMKRRGASSSSTDNQNASEEPKKDLRSRGLCLVPISCTLQVGSDNG--ADYWA 399

[Close]

BLAST of Sed0025638 vs. TAIR 10
Match: AT2G20100.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 105.9 bits (263), Expect = 6.4e-23
Identity = 73/168 (43.45%), Postives = 88/168 (52.38%), Query Frame = 0


Query: 194 CNSTEPRINQHSPPLKKPRSDSRSLCPPLKVRKEKLGDRIAALQQLVAPFGKTDTASVLM 253
           CNS+E  +   S   KKP+    S    LKVRKEKLG RIA+L QLV+PFGKTDTASVL 
Sbjct: 192 CNSSE--MIGSSFANKKPKLQVPSSQSTLKVRKEKLGGRIASLHQLVSPFGKTDTASVLS 251

Query: 254 EAIGYIKFLQNQVETLSVPYMKPSSKPT--HRRLVEDEN--------------------- 313
           EAIGYI+FL +Q+E LS+PY    S+    H+    + N                     
Sbjct: 252 EAIGYIRFLHSQIEALSLPYFGTPSRNNMMHQHAQRNMNGIFPEDPGQLVNEYCMKRGVS 311

Query: 314 -----------EEQPNQDLRSRGLCLVPLGCLSYVTGDGGGAAGIWPP 328
                       E+P +DLRSRGLCLVP+ C   V  D G  A  W P
Sbjct: 312 LSSTDNQKSNPNEEPMKDLRSRGLCLVPISCTLQVGSDNG--ADYWAP 355

[Close]

BLAST of Sed0025638 vs. TAIR 10
Match: AT1G61660.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 105.5 bits (262), Expect = 8.3e-23
Identity = 95/287 (33.10%), Postives = 133/287 (46.34%), Query Frame = 0


Query: 44  LNNNNTNNSMLQDFGFQWISSENLLSHSLQNPQAEKFTEMLNNPSCTDQDLDLNDLSHKL 103
           LN++   +S  QD G  ++S+    S  + NP         ++ S      D     +  
Sbjct: 112 LNSSFIRSSQDQDHGQGFLSTTT--SPYILNPACSSSPSTSSSSSLIRTFYDPEPSPYNF 171

Query: 104 SIKINGGDFYNINSRSNNNRPHFAQIYPSINVSNWNLSTPAPPPAFSNCLDLNLQTPADL 163
               +G       S +N   PH    Y  IN S  N +   P    S+  +LN  TP+  
Sbjct: 172 VSTTSGSINDPQLSWANKTNPHHQVAYGLIN-SFSNNANSRPFWNSSSTTNLNNTTPS-- 231

Query: 164 FAAAGNFGFHHQIQPSKMTPFTSEVTEPKRCNSTEPRINQHSPPLKKPRSDSRSLCPPLK 223
                NF    QI  +++   T  +    +  S + R   +    KKPR  + S  P  K
Sbjct: 232 -----NFVTTPQIISTRLEDKTKNLKTRAQSESLK-RAKDNESAAKKPRVTTPSPLPTFK 291

Query: 224 VRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPYMKPSSKPTHR 283
           VRKE L D+I +LQQLV+PFGKTDTASVL EAI YIKFL +QV  LS PYMK  +    +
Sbjct: 292 VRKENLRDQITSLQQLVSPFGKTDTASVLQEAIEYIKFLHDQVTVLSTPYMKQGASNQQQ 351

Query: 284 RLVEDEN---EEQPNQDLRSRGLCLVPLGCLSYVTGDGGGAAGIWPP 328
           + +  ++   +E  N +LR  GLCLVP+     V  +    A  W P
Sbjct: 352 QQISGKSKSQDENENHELRGHGLCLVPISSTFPVANE--TTADFWTP 385

The following BLAST results are available for this feature:

BLAST of Sed0025638 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142259.1	1.8e-112	59.15	transcription factor bHLH110 isoform X1 [Momordica charantia]	[more]
KAG7024182.1	6.9e-112	58.87	Transcription factor bHLH [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023534953.1	9.0e-112	58.87	transcription factor bHLH110 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
KAG6591297.1	5.8e-111	58.63	Transcription factor basic helix-loop-helix 110, partial [Cucurbita argyrosperma...	[more]
XP_022935808.1	3.8e-110	58.39	transcription factor bHLH110-like isoform X1 [Cucurbita moschata]	[more]

BLAST of Sed0025638 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SFZ3	1.5e-56	39.96	Transcription factor bHLH110 OS=Arabidopsis thaliana OX=3702 GN=BHLH110 PE=2 SV=...	[more]
Q8GXT3	3.9e-25	40.51	Transcription factor bHLH123 OS=Arabidopsis thaliana OX=3702 GN=BHLH123 PE=1 SV=...	[more]
Q8S3D1	1.6e-23	37.34	Transcription factor bHLH68 OS=Arabidopsis thaliana OX=3702 GN=BHLH68 PE=1 SV=2	[more]
Q7XHI5	9.0e-22	43.45	Transcription factor bHLH133 OS=Arabidopsis thaliana OX=3702 GN=BHLH133 PE=1 SV=...	[more]
Q94JL3	1.2e-21	33.10	Transcription factor bHLH112 OS=Arabidopsis thaliana OX=3702 GN=BHLH112 PE=1 SV=...	[more]

BLAST of Sed0025638 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CL27	8.8e-113	59.15	transcription factor bHLH110 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1FBJ5	1.8e-110	58.39	transcription factor bHLH110-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1CLA6	3.1e-110	58.71	transcription factor bHLH110 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1IEG2	1.5e-109	58.12	transcription factor bHLH110-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1F6H0	6.5e-108	57.92	transcription factor bHLH110-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of Sed0025638 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G27660.1	1.0e-57	39.96	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G20640.1	2.8e-26	40.51	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G29100.1	1.2e-24	37.34	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G20100.1	6.4e-23	43.45	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G61660.1	8.3e-23	33.10	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 223..269 e-value: 1.5E-6 score: 30.2
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 223..269
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..203
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..217
None	No IPR available	PANTHER	PTHR16223:SF56	OS01G0105700 PROTEIN	coord: 187..268
None	No IPR available	PANTHER	PTHR16223	TRANSCRIPTION FACTOR BHLH83-RELATED	coord: 48..177
None	No IPR available	PANTHER	PTHR16223:SF56	OS01G0105700 PROTEIN	coord: 48..177
None	No IPR available	PANTHER	PTHR16223	TRANSCRIPTION FACTOR BHLH83-RELATED	coord: 187..268
None	No IPR available	CDD	cd11393	bHLH_AtbHLH_like	coord: 223..268 e-value: 1.22972E-21 score: 83.7699
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 213..262 score: 11.178779

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0025638.1	Sed0025638.1	mRNA
Sed0025638.2	Sed0025638.2	mRNA
Sed0025638.3	Sed0025638.3	mRNA
Sed0025638.4	Sed0025638.4	mRNA
Sed0025638.5	Sed0025638.5	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046983	protein dimerization activity