Sed0025607 (gene) Chayote v1

Overview


Name	Sed0025607
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Ubiquitin-like domain-containing protein
Location	LG13: 25085696 .. 25089747 (-)
RNA-Seq Expression	Sed0025607
Synteny	Sed0025607

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATGGAAATTGCAGAGTTGAAAAATTCTGTCTCGGAATTGCCTCCGACAGAAGCTCCGAATGCTACTCTTTTTCTTCTTCCCCAAAAGCCAAACCCTAAATCTCTCTCTCTCTCTTAGAATCCGCCATTTTTCCCCCCACCACCATGCGTGTTCTCCTAACCTAAGCATCATCTCTCTCTCTCTCTCTCTTTTCCCCCCTTTTTAAACCCCCCAATTTCTTTCTCCCCTTCCAATTCCATGGCGATTCACGGCTTTTGCACCATCGACGTCGCCGACTTCCCGCCACCGCCCACGGCGGAGAAGCGCCGCCGGTCCTTCTCCCTGCTCTCGTCTCCTTTGATGATTGTTGGGTTTCCCAAGAAGAAGACTGTTCTGTATCGCCAGCTTCCGCATCAGCCTCTCATGCTCTCTGTCCTTAAGTTGGATGGTTCTTGTTTTGGTAATTTGTTTCTTTTTTTTTTTGTTCTTTTTTGGGTGATTGCTTTAGAGCTTGATCTGCTTGTGGGTTTGTTTTTGTTTCTGATTTTGAGTGGTGGGTTCTCTGGCTTTTGGTTGTTTTTGTGTTATGGTGCATTGTGAAGCTGGCTGGACTAAGTCTGATTTTTAGGATGTTGGAGGTTTCTGTATGTTGTTTATTTATATGTGAGTGTTTGGAATAGCTTAAGCCCGCCTTAACTACTCTCGTAGGACAATCGTCTGAAACTATAATATTTTGTTGAGAATCCCACGTTGGAAAGGTGGAGAGACTTCGTAGCATATATAAGATGGGAGAGCTACTCCTCTCATTACTAATTGGTTTTATACATTTGGTTGTTGAGGAAACCTATAGAAATGAAAGTCTTAGGTAGGTGGTGGTTTGTGTTTGCGGGGCCGTTTATGCAAATGGGAGGTTGAGTTACTTTAACTCAACTTACGTTTGGCCCATTGGTTATTATATCTGGTGGATTGGCCCAAAACCAAGCTGTGTTTCACATAACACAAGTCGAGATTAGCCATTTCATCTTCCTTGTTATATAATAACCTGACCCTAGACAGAATTTATAATAATCCAACCGATGCCCCAAACACGGATTAGTGATGGTTTGAAGGTTTCTATATTTCTGTTCTCTGTTTTACCTTTTTTAACTAGTTTTTTGGATGGTTGTGAGGTGTCTTCATTTGCTTGAAATGCTATTGTTTGACCGCTAAAGCCAAGAGAATGATGTGCTAAATTTGAAAAATAAGGATGTCTTTGTTGCACTGCACCCTCTTTTAATATAGAACTTCAATGAATTGAAATGTTTGATGCAGATATTCAAGTCAAGGGATCTGCTACCATTGCTGAATTAAAGGGGGCAGTGGAGGCTGTTTTCAGTCATATGCCACAGGATGGACCAGGAAAGATTTCATGGTTGGTTCATTTAATTCTTTGACTCATTTGATTTAATATCAATACCAGGCCAAAACTGAGGACAATATTTGATGACATGTTGAAAATTTGAAATAGATGGTTTATAAAACTGTTTATCTGTTCTGCATTAAAATTTAAATCTTGATAGTTGATATCTCTTCACTTAGGTAATAGTTTATGCGATGGTTTAATCACCATGGGTAACCTAGCAGTCAAAAGGTCATTAATAAACCAAAAGGTTGTGGGTTCAATCCATGGTAGCCACCTACCTAGGAATTAATTTCCTACATATCTCCTTGACATCTAAATGATATAGGGTCAGACAGTATGTCCCATGAGAGTAGTTAAAGTATGCGCAAGTTGGCCCGTATGCTCACGAATATAAAAAAAAGTTTATACAATGGTTTATTTTTTTCCCAATTTAACTTGTTTTTGTTCTTCTTTTATTCATGGAGGCTCCATGTATGGTGGCATTTCTGCTTATGCTATGATGGTCAGAAGTTGATTGATGATACAGACTACATTGTAAATTTTGGCATCAAGGATGGTGATCAGGTATGTAGCTAGCTGTAGTTTATGTTGTCTTTTGTCGTGTTGATAATCATTCTGTGCTTGATGATTTAAATTTCCTGAGATGTTTTGACTGGATCATAAGTTTAAACATGGCAAAACAGAGTGCGCTATTAGGTTTTCGACCTTGAAACTTGAATGCCAGACCCTTGCAAACTAGTTCAAAGAGTGTTTTTCAAGATTCAGGTGTAGACTCCCTTTTGGCTTCTGTAATCAAACCAGAAAAGAAATGAAGATTCGGTTTCATTTCATTGGTTTTTTTAATTATTTGTTTGGTGCAATATTAGAAATGTGGATATACTGGTTAGATCATGTTTGACAGGCTATTTCAGTTACAACTTTTGGATTTTATTAAACAACAACTAAATTTCAAGACACAGGTCTAGCACCTGCCTTGCACCTTGAGCGCCTTGCCTTGAATAAGCGAGGCTCATGTAAAAAGATGTGCTCTAGGCACGCAAAAATAAGTTTAACTAACTCTTAACGCAAAAAACATTATGTTTAAGTTTTTTTTGTTCTTTATTAATTAAAAAAAAATAACAATTACTAACTCTAGAGTATTTTTTAATATTCTCACTCCAACTATGTATTCTCTTCTCCATTAATGTACTTACATATAGTGCGCCTCATAAAAAAGCCCGCGTTTTTTGTTTTGTATCCGGAGCTTTTTAAAACACTGATTGCAAATCTAGTTACTGGGAGGAATGTGCTTCCAGAATTTTAAATGGAATATGATTAAGAAGTATAGAATTATACTTCTCAAGCTTATGTTCATAGATTTTCCTTGTTTTAACATGTTCAGCTTCAGTTTGTTCGGCATGTCACAACTGGCTACAATATCATAAGAAAGCAATCAAAGAAAGGTTTGGCTTCCCCAAAACTGCACAGTAGGTAAGATTCTTACCTTCTAAATGGCTTGCCTGTCAAGGAGTTAAGATTATCCCCCATAAAATTCTAAGAATATATTAAACTTCAGTTATCCTTGATGGGAAAACAAGGTATTGATACAGAATAGTCAAGACTTGGGCATTAAAAAGAATTTCAAAAGCTTGGGACAGCAAAAATCATCTTGAATGTGATAGAATATGCTATTTGAAATTTTGGGAATTATATAGGGCTAAGAAAGCATACAAGACATTTGTTCCTTGAATGATTTGTTCTATTAGATTATATGTAGTCCACCTTTTTTATTAAGGTTGTGGGACCTTCTCACTTTTTCAATGTGTGATCCTCAGCATGTTGTTCTAGATGGTACCTCCTTGAGTTCACCAATTTTTTATTAGATCCCATTTTCATTTTTATTGAACGAATACTATTTAGTTTTAATGGGTTTTTATACCATATTAGATTATATAAGGTTTCATCTCAAAACCATTTGACAATCAGAATCGTCCGCCTCTCTTATAAAGGTTTTGAGACCTCTCCATTTTTTCAATGTGGGATCCTCACCATATTCATCTAAATAATTCATTTTATACCACATTACTGATCCTCTTTTTCTCCAAACTCACAGGACATCATCTCGATCGAGAAGCTGCAAGCAAAATGATCAGGACGATACGGAACGATATAATTACAACGATATCGAGAGTGGACTCTTTCAACATCAAGGCAACAATGAGCTCTTCATAAAACATGGGCCAAAGATGGTAGTCTTTTTGGGAGGGTGGCTCTCACACACCAAGCTGTCATCTACTGGAAAAATGAGCATCAATAGCCTGGCTCGTCCATTGCGTGCTCGGCCTAGTCTGGTGCGTTGTTTTAAGAGCTTAATACAATTGTGCCGCGAGAAAAAACATTACCAGAAAGTGAGTAGAAAGAATAGATCCATCATAGGAGTCTAAATAGATTAGGAACGATTGAAACACACACACAGAGGTCAACTAGATTGTGTTAGTCATCTCTGATCTGTTCTTTCATATCTTTGGCAATAAACTGTTTGTAGAAATGTAAGCATTCACAATAATGGGTTACCAAAATTTGTTGGAGTTTAGTCAGGTGGTGATTATTTTTGTAATAAACAAATATGAGGTATGAAAATTGTAACTTTCAATTTCAAGGAAAGGAGTACATTCTGATTCATGTTTAA

mRNA sequence

AAAATGGAAATTGCAGAGTTGAAAAATTCTGTCTCGGAATTGCCTCCGACAGAAGCTCCGAATGCTACTCTTTTTCTTCTTCCCCAAAAGCCAAACCCTAAATCTCTCTCTCTCTCTTAGAATCCGCCATTTTTCCCCCCACCACCATGCGTGTTCTCCTAACCTAAGCATCATCTCTCTCTCTCTCTCTCTTTTCCCCCCTTTTTAAACCCCCCAATTTCTTTCTCCCCTTCCAATTCCATGGCGATTCACGGCTTTTGCACCATCGACGTCGCCGACTTCCCGCCACCGCCCACGGCGGAGAAGCGCCGCCGGTCCTTCTCCCTGCTCTCGTCTCCTTTGATGATTGTTGGGTTTCCCAAGAAGAAGACTGTTCTGTATCGCCAGCTTCCGCATCAGCCTCTCATGCTCTCTGTCCTTAAGTTGGATGGTTCTTGTTTTGATATTCAAGTCAAGGGATCTGCTACCATTGCTGAATTAAAGGGGGCAGTGGAGGCTGTTTTCAGTCATATGCCACAGGATGGACCAGGAAAGATTTCATGGCTCCATGTATGGTGGCATTTCTGCTTATGCTATGATGGTCAGAAGTTGATTGATGATACAGACTACATTGTAAATTTTGGCATCAAGGATGGTGATCAGCTTCAGTTTGTTCGGCATGTCACAACTGGCTACAATATCATAAGAAAGCAATCAAAGAAAGGTTTGGCTTCCCCAAAACTGCACAGTAGGACATCATCTCGATCGAGAAGCTGCAAGCAAAATGATCAGGACGATACGGAACGATATAATTACAACGATATCGAGAGTGGACTCTTTCAACATCAAGGCAACAATGAGCTCTTCATAAAACATGGGCCAAAGATGGTAGTCTTTTTGGGAGGGTGGCTCTCACACACCAAGCTGTCATCTACTGGAAAAATGAGCATCAATAGCCTGGCTCGTCCATTGCGTGCTCGGCCTAGTCTGGTGCGTTGTTTTAAGAGCTTAATACAATTGTGCCGCGAGAAAAAACATTACCAGAAAGTGAGTAGAAAGAATAGATCCATCATAGGAGTCTAAATAGATTAGGAACGATTGAAACACACACACAGAGGTCAACTAGATTGTGTTAGTCATCTCTGATCTGTTCTTTCATATCTTTGGCAATAAACTGTTTGTAGAAATGTAAGCATTCACAATAATGGGTTACCAAAATTTGTTGGAGTTTAGTCAGGTGGTGATTATTTTTGTAATAAACAAATATGAGGTATGAAAATTGTAACTTTCAATTTCAAGGAAAGGAGTACATTCTGATTCATGTTTAA

Coding sequence (CDS)

ATGGCGATTCACGGCTTTTGCACCATCGACGTCGCCGACTTCCCGCCACCGCCCACGGCGGAGAAGCGCCGCCGGTCCTTCTCCCTGCTCTCGTCTCCTTTGATGATTGTTGGGTTTCCCAAGAAGAAGACTGTTCTGTATCGCCAGCTTCCGCATCAGCCTCTCATGCTCTCTGTCCTTAAGTTGGATGGTTCTTGTTTTGATATTCAAGTCAAGGGATCTGCTACCATTGCTGAATTAAAGGGGGCAGTGGAGGCTGTTTTCAGTCATATGCCACAGGATGGACCAGGAAAGATTTCATGGCTCCATGTATGGTGGCATTTCTGCTTATGCTATGATGGTCAGAAGTTGATTGATGATACAGACTACATTGTAAATTTTGGCATCAAGGATGGTGATCAGCTTCAGTTTGTTCGGCATGTCACAACTGGCTACAATATCATAAGAAAGCAATCAAAGAAAGGTTTGGCTTCCCCAAAACTGCACAGTAGGACATCATCTCGATCGAGAAGCTGCAAGCAAAATGATCAGGACGATACGGAACGATATAATTACAACGATATCGAGAGTGGACTCTTTCAACATCAAGGCAACAATGAGCTCTTCATAAAACATGGGCCAAAGATGGTAGTCTTTTTGGGAGGGTGGCTCTCACACACCAAGCTGTCATCTACTGGAAAAATGAGCATCAATAGCCTGGCTCGTCCATTGCGTGCTCGGCCTAGTCTGGTGCGTTGTTTTAAGAGCTTAATACAATTGTGCCGCGAGAAAAAACATTACCAGAAAGTGAGTAGAAAGAATAGATCCATCATAGGAGTCTAA

Protein sequence

MAIHGFCTIDVADFPPPPTAEKRRRSFSLLSSPLMIVGFPKKKTVLYRQLPHQPLMLSVLKLDGSCFDIQVKGSATIAELKGAVEAVFSHMPQDGPGKISWLHVWWHFCLCYDGQKLIDDTDYIVNFGIKDGDQLQFVRHVTTGYNIIRKQSKKGLASPKLHSRTSSRSRSCKQNDQDDTERYNYNDIESGLFQHQGNNELFIKHGPKMVVFLGGWLSHTKLSSTGKMSINSLARPLRARPSLVRCFKSLIQLCREKKHYQKVSRKNRSIIGV

Homology

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BLAST of Sed0025607 vs. NCBI nr
Match: XP_038899214.1 (uncharacterized protein LOC120086568 [Benincasa hispida])

HSP 1 Score: 442.2 bits (1136), Expect = 3.3e-120
Identity = 218/278 (78.42%), Postives = 237/278 (85.25%), Query Frame = 0


Query: 1   MAIHGFCTIDVADFPPPP-----TAEKRRRSFSLLSSPLMIVGFPKKKTVLYRQLPHQPL 60
           MAI G CT+DV +FPPPP     T EK RRSFSLLSSPLMIVG   +K VLYRQLPHQPL
Sbjct: 1   MAIDGVCTLDVVEFPPPPPPPPTTVEKHRRSFSLLSSPLMIVGL-SRKNVLYRQLPHQPL 60

Query: 61  MLSVLKLDGSCFDIQVKGSATIAELKGAVEAVFSHMPQDGPGKISWLHVWWHFCLCYDGQ 120
           MLSVLKLDGSCFDIQVK SAT+AELKGAVE+VFSHMPQ+GPGKISWLHVWWHFCLCY GQ
Sbjct: 61  MLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQNGPGKISWLHVWWHFCLCYAGQ 120

Query: 121 KLIDDTDYIVNFGIKDGDQLQFVRHVTTGYNIIRKQSKKGLASPKLHSRTSSRSRSCKQN 180
           KL+DD DYI NFGIKDGDQLQFVRHVTTGYN IRKQSKK + S KL SR S RS++ +QN
Sbjct: 121 KLVDDADYIANFGIKDGDQLQFVRHVTTGYNAIRKQSKKCVVSSKLLSRISYRSKNYEQN 180

Query: 181 DQDDTERYNYNDIESGLFQHQGNNELFIKHGPKMVVFLGGWLSHTKLSSTGKMSINSLAR 240
           DQ+D ERYNYNDIESG FQH GNNELF+ H PKMVVFLGGW SHTKL+S GK  INSL R
Sbjct: 181 DQEDMERYNYNDIESGRFQHHGNNELFMNHEPKMVVFLGGWFSHTKLASAGKTRINSLVR 240

Query: 241 PLRARPSLVRCFKSLIQLCREKKHYQKVSRKNRSIIGV 274
           P   RPSLVR FK+LIQLCREK+HY+KV++K RSIIGV
Sbjct: 241 PSGTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV 277

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BLAST of Sed0025607 vs. NCBI nr
Match: KAA0038816.1 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 427.6 bits (1098), Expect = 8.3e-116
Identity = 217/278 (78.06%), Postives = 234/278 (84.17%), Query Frame = 0


Query: 1   MAIHGFCTIDVADFPPP---PTAEKRRRSFSLLSSPLMIVGFPKKKTVLYRQLPHQPLML 60
           MA+ G CT+DV DFPPP    TAEK RRSFSLLSSPLMIVG   +K VLYRQLPHQPLML
Sbjct: 1   MAVDGVCTLDVVDFPPPTSTTTAEKHRRSFSLLSSPLMIVGL-SRKNVLYRQLPHQPLML 60

Query: 61  SVLKLDGSCFDIQVKGSATIAELKGAVEAVFSHMPQDGPGKISWLHVWWHFCLCYDGQKL 120
           SVLKLDGSCFDIQV+ SAT+AELKGAVE VFSHMPQ+GPGKISWLHVWWHFCLCYDGQKL
Sbjct: 61  SVLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKISWLHVWWHFCLCYDGQKL 120

Query: 121 IDDTDYIVNFGIKDGDQLQFVRHVTTGYNIIRKQSKKGLASPKLHSRTSSRSRSCKQNDQ 180
           IDD DYI +FGIKDGDQLQFVRHVTTGYN+IRKQSKK   S KL SR SSRS+S KQNDQ
Sbjct: 121 IDDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVSSKLISRISSRSKSFKQNDQ 180

Query: 181 DDTERYN--YNDIESGLFQHQGNNELFIKHGPKMVVFLGGWLSHTKLSSTGKMSINSLAR 240
            D ERYN  YNDIESG  QH GNN+LF+   PKMVVFLGGW SHTKL+S GKMSI SL R
Sbjct: 181 KDMERYNYKYNDIESGRCQHNGNNDLFVNQ-PKMVVFLGGWFSHTKLASAGKMSIKSLVR 240

Query: 241 PLRARPSLVRCFKSLIQLCREKKHYQKVSRKNRSIIGV 274
           P   RPSLV   K+LIQLCREK+HY+KV++K RSIIGV
Sbjct: 241 PSVTRPSLVGGLKNLIQLCREKRHYEKVNKKKRSIIGV 276

[Close]

BLAST of Sed0025607 vs. NCBI nr
Match: XP_008466420.1 (PREDICTED: uncharacterized protein LOC103503833 [Cucumis melo] >TYK31439.1 U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 425.6 bits (1093), Expect = 3.2e-115
Identity = 216/278 (77.70%), Postives = 234/278 (84.17%), Query Frame = 0


Query: 1   MAIHGFCTIDVADFPPP---PTAEKRRRSFSLLSSPLMIVGFPKKKTVLYRQLPHQPLML 60
           MA+ G CT+DV DFPPP    TAEK RRSFSLLSSPLMIVG   +K VLYRQLPHQPLML
Sbjct: 1   MAVDGVCTLDVVDFPPPTSTTTAEKHRRSFSLLSSPLMIVGL-SRKNVLYRQLPHQPLML 60

Query: 61  SVLKLDGSCFDIQVKGSATIAELKGAVEAVFSHMPQDGPGKISWLHVWWHFCLCYDGQKL 120
           SVLKLDGSCFDIQV+ SAT+AELKGAVE VFSHMPQ+GPGKISWLHVWWHFCLCYDGQKL
Sbjct: 61  SVLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKISWLHVWWHFCLCYDGQKL 120

Query: 121 IDDTDYIVNFGIKDGDQLQFVRHVTTGYNIIRKQSKKGLASPKLHSRTSSRSRSCKQNDQ 180
           IDD DYI +FGIKDGDQLQFVRHVTTGYN+IRKQSKK   S KL SR SSRS+S KQNDQ
Sbjct: 121 IDDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVSSKLISRISSRSKSFKQNDQ 180

Query: 181 DDTERYN--YNDIESGLFQHQGNNELFIKHGPKMVVFLGGWLSHTKLSSTGKMSINSLAR 240
            D ERYN  YNDIESG  QH GN++LF+   PKMVVFLGGW SHTKL+S GKMSI SL R
Sbjct: 181 KDMERYNYKYNDIESGRCQHNGNDDLFVNQ-PKMVVFLGGWFSHTKLASAGKMSIKSLVR 240

Query: 241 PLRARPSLVRCFKSLIQLCREKKHYQKVSRKNRSIIGV 274
           P   RPSLV   K+LIQLCREK+HY+KV++K RSIIGV
Sbjct: 241 PSVTRPSLVGGLKNLIQLCREKRHYEKVNKKKRSIIGV 276

[Close]

BLAST of Sed0025607 vs. NCBI nr
Match: XP_004136480.1 (uncharacterized protein LOC101219460 [Cucumis sativus] >KGN60092.1 hypothetical protein Csa_001701 [Cucumis sativus])

HSP 1 Score: 424.5 bits (1090), Expect = 7.0e-115
Identity = 214/278 (76.98%), Postives = 232/278 (83.45%), Query Frame = 0


Query: 1   MAIHGFCTIDVADFPP---PPTAEKRRRSFSLLSSPLMIVGFPKKKTVLYRQLPHQPLML 60
           MA+ G C +DV DFPP     T EK RRSFSLLSSPLMIVG   +K VLYRQLPHQPLML
Sbjct: 1   MAVDGVCALDVVDFPPLQSTTTPEKHRRSFSLLSSPLMIVGL-SRKNVLYRQLPHQPLML 60

Query: 61  SVLKLDGSCFDIQVKGSATIAELKGAVEAVFSHMPQDGPGKISWLHVWWHFCLCYDGQKL 120
           SVLKLDGS FDIQV+ SAT+AELKGAVE VFSHMPQ GPGKISWLHVWWHFCLCY GQKL
Sbjct: 61  SVLKLDGSSFDIQVRRSATVAELKGAVELVFSHMPQHGPGKISWLHVWWHFCLCYAGQKL 120

Query: 121 IDDTDYIVNFGIKDGDQLQFVRHVTTGYNIIRKQSKKGLASPKLHSRTSSRSRSCKQNDQ 180
           +DD DYI +FGIKDGDQLQFVRHVTTGYN+IRKQSKK + S KL SR SSRS+S KQNDQ
Sbjct: 121 VDDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKLVVSSKLISRISSRSKSFKQNDQ 180

Query: 181 DDTERYNYNDIESGLFQHQG--NNELFIKHGPKMVVFLGGWLSHTKLSSTGKMSINSLAR 240
            D ERYNYNDIESG  QH G  NN+LF+ H PKMVVFLGGW SHTKL+S GKMSI SL R
Sbjct: 181 KDMERYNYNDIESGRCQHSGSNNNDLFMNHEPKMVVFLGGWFSHTKLASAGKMSIKSLVR 240

Query: 241 PLRARPSLVRCFKSLIQLCREKKHYQKVSRKNRSIIGV 274
           P   RPSLVR FK+LIQLCREK+HY+KV++K RSIIGV
Sbjct: 241 PSVTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV 277

[Close]

BLAST of Sed0025607 vs. NCBI nr
Match: XP_022134606.1 (uncharacterized protein LOC111006831 [Momordica charantia])

HSP 1 Score: 417.9 bits (1073), Expect = 6.6e-113
Identity = 211/278 (75.90%), Postives = 231/278 (83.09%), Query Frame = 0


Query: 1   MAIHGFCTIDVADFPPPPTA----EKRRRSFSLL-SSPLMIVGFPKKKTVLYRQLPHQPL 60
           MA+ G C +D+ DFP PP A     KRRRSFSLL SSPLMIVG   +K V YRQLPHQPL
Sbjct: 1   MAVDGVCRLDIGDFPAPPRALSSLAKRRRSFSLLISSPLMIVGL-SRKNVSYRQLPHQPL 60

Query: 61  MLSVLKLDGSCFDIQVKGSATIAELKGAVEAVFSHMPQDGPGKISWLHVWWHFCLCYDGQ 120
            LSVLKLDGSCFDIQVK SAT+AELKGAVEAVFSHMPQDGPGKISWLHVWWHFCLCY G+
Sbjct: 61  HLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGPGKISWLHVWWHFCLCYAGE 120

Query: 121 KLIDDTDYIVNFGIKDGDQLQFVRHVTTGYNIIRKQSKKGLASPKLHSRTSSRSRSCKQN 180
           KL+DDTDYI NFGIKDGDQLQFVRHVTTGYN+IRKQS + + S KLHSRTSSRS+S K+N
Sbjct: 121 KLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQSNEYVVSSKLHSRTSSRSKSHKRN 180

Query: 181 DQDDTERYNYNDIESGLFQHQGNNELFIKHGPKMVVFLGGWLSHTKLSSTGKMSINSLAR 240
           DQD     NYNDIE G FQH  N ELF+   PKMVVFLGGW SHTKL+S G+MSINSL R
Sbjct: 181 DQD-----NYNDIEMGRFQHHNNGELFMSPEPKMVVFLGGWFSHTKLASAGRMSINSLVR 240

Query: 241 PLRARPSLVRCFKSLIQLCREKKHYQKVSRKNRSIIGV 274
           P  +RPSLVR FK+L+QLCREK+HYQKVS+K RSII V
Sbjct: 241 PSGSRPSLVRGFKNLVQLCREKRHYQKVSKKKRSIIVV 272

[Close]

BLAST of Sed0025607 vs. ExPASy Swiss-Prot
Match: Q84WS8 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SNRNP25 PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.1e-12
Identity = 49/165 (29.70%), Postives = 79/165 (47.88%), Query Frame = 0


Query: 9   IDVADFPPPPTAEKRRRSFSLLSSPLMIVGFPKKKTV-----LYRQLPHQPLMLSVLKLD 68
           ++  D+      EK +   S L +  ++   P+  T+     L        + LSV+KLD
Sbjct: 1   MESGDYDVETKREKLKSVLSQLLADPILADVPRNPTLSDVVTLVSLEKGSAMRLSVVKLD 60

Query: 69  GSCFDIQVKGSATIAELKGAVEAVFSHMPQDGPG--KISWLHVWWHFCLCYDGQKLIDDT 128
           GS  D+ V  SAT+ +LK  ++   + M Q   G   ISW HVW +FCL  + +KL+DD 
Sbjct: 61  GSSLDVAVMNSATLKDLKLLIKKKVNEMEQANMGHRHISWKHVWSNFCLSCNNEKLLDDN 120

Query: 129 DYIVNFGIKDGDQLQFVRHVTTGYNIIRKQSKKGLASPKLHSRTS 167
             + + GI++  Q+ F+ +V         + KK      LH  +S
Sbjct: 121 AVLQDVGIRNNSQVTFMPYVMKKGRGRHSKRKKHRLFRSLHKTSS 165

[Close]

BLAST of Sed0025607 vs. ExPASy Swiss-Prot
Match: Q9BV90 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Homo sapiens OX=9606 GN=SNRNP25 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.5e-06
Identity = 28/90 (31.11%), Postives = 52/90 (57.78%), Query Frame = 0


Query: 53  QPLMLSVLKLDGSCFDIQVKGSATIAELKGAVEAVFSHMPQDGPG---KISWLHVWWHFC 112
           Q + + V K+DG    + V  SAT+ +LK A++  +  + Q+  G    ISW +VW  + 
Sbjct: 39  QAMTVRVCKMDGEVMPVVVVQSATVLDLKKAIQR-YVQLKQEREGGIQHISWSYVWRTYH 98

Query: 113 LCYDGQKLIDDTDYIVNFGIKDGDQLQFVR 140
           L   G+KL +D   + ++GI++ D++ F++
Sbjct: 99  LTSAGEKLTEDRKKLRDYGIRNRDEVSFIK 127

[Close]

BLAST of Sed0025607 vs. ExPASy Swiss-Prot
Match: Q8VIK1 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Mus musculus OX=10090 GN=Snrnp25 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.3e-06
Identity = 27/90 (30.00%), Postives = 52/90 (57.78%), Query Frame = 0


Query: 53  QPLMLSVLKLDGSCFDIQVKGSATIAELKGAVEAVFSHMPQDGPG---KISWLHVWWHFC 112
           Q + + V K+DG    + V  +AT+ +LK A++  +  + Q+  G    ISW +VW  + 
Sbjct: 30  QAMTVRVCKMDGEVMPVVVVQNATVLDLKKAIQR-YVQLKQEREGGVQHISWSYVWRTYH 89

Query: 113 LCYDGQKLIDDTDYIVNFGIKDGDQLQFVR 140
           L   G+KL +D   + ++GI++ D++ F++
Sbjct: 90  LTSAGEKLTEDRKKLRDYGIRNRDEVSFIK 118

[Close]

BLAST of Sed0025607 vs. ExPASy Swiss-Prot
Match: Q3ZBQ4 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Bos taurus OX=9913 GN=SNRNP25 PE=2 SV=2)

HSP 1 Score: 53.5 bits (127), Expect = 4.3e-06
Identity = 27/90 (30.00%), Postives = 52/90 (57.78%), Query Frame = 0


Query: 53  QPLMLSVLKLDGSCFDIQVKGSATIAELKGAVEAVFSHMPQDGPG---KISWLHVWWHFC 112
           Q + + V K+DG    + V  +AT+ +LK A++  +  + Q+  G    ISW +VW  + 
Sbjct: 30  QAMTVRVCKMDGEVMPVVVVQNATVLDLKKAIQR-YVQLRQEREGGIQHISWSYVWRTYH 89

Query: 113 LCYDGQKLIDDTDYIVNFGIKDGDQLQFVR 140
           L   G+KL +D   + ++GI++ D++ F++
Sbjct: 90  LTSAGEKLTEDRKKLRDYGIRNRDEVSFIK 118

[Close]

BLAST of Sed0025607 vs. ExPASy TrEMBL
Match: A0A5A7T9I3 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G003750 PE=4 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 4.0e-116
Identity = 217/278 (78.06%), Postives = 234/278 (84.17%), Query Frame = 0


Query: 1   MAIHGFCTIDVADFPPP---PTAEKRRRSFSLLSSPLMIVGFPKKKTVLYRQLPHQPLML 60
           MA+ G CT+DV DFPPP    TAEK RRSFSLLSSPLMIVG   +K VLYRQLPHQPLML
Sbjct: 1   MAVDGVCTLDVVDFPPPTSTTTAEKHRRSFSLLSSPLMIVGL-SRKNVLYRQLPHQPLML 60

Query: 61  SVLKLDGSCFDIQVKGSATIAELKGAVEAVFSHMPQDGPGKISWLHVWWHFCLCYDGQKL 120
           SVLKLDGSCFDIQV+ SAT+AELKGAVE VFSHMPQ+GPGKISWLHVWWHFCLCYDGQKL
Sbjct: 61  SVLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKISWLHVWWHFCLCYDGQKL 120

Query: 121 IDDTDYIVNFGIKDGDQLQFVRHVTTGYNIIRKQSKKGLASPKLHSRTSSRSRSCKQNDQ 180
           IDD DYI +FGIKDGDQLQFVRHVTTGYN+IRKQSKK   S KL SR SSRS+S KQNDQ
Sbjct: 121 IDDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVSSKLISRISSRSKSFKQNDQ 180

Query: 181 DDTERYN--YNDIESGLFQHQGNNELFIKHGPKMVVFLGGWLSHTKLSSTGKMSINSLAR 240
            D ERYN  YNDIESG  QH GNN+LF+   PKMVVFLGGW SHTKL+S GKMSI SL R
Sbjct: 181 KDMERYNYKYNDIESGRCQHNGNNDLFVNQ-PKMVVFLGGWFSHTKLASAGKMSIKSLVR 240

Query: 241 PLRARPSLVRCFKSLIQLCREKKHYQKVSRKNRSIIGV 274
           P   RPSLV   K+LIQLCREK+HY+KV++K RSIIGV
Sbjct: 241 PSVTRPSLVGGLKNLIQLCREKRHYEKVNKKKRSIIGV 276

[Close]

BLAST of Sed0025607 vs. ExPASy TrEMBL
Match: A0A5D3E6G8 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007520 PE=4 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.5e-115
Identity = 216/278 (77.70%), Postives = 234/278 (84.17%), Query Frame = 0


Query: 1   MAIHGFCTIDVADFPPP---PTAEKRRRSFSLLSSPLMIVGFPKKKTVLYRQLPHQPLML 60
           MA+ G CT+DV DFPPP    TAEK RRSFSLLSSPLMIVG   +K VLYRQLPHQPLML
Sbjct: 1   MAVDGVCTLDVVDFPPPTSTTTAEKHRRSFSLLSSPLMIVGL-SRKNVLYRQLPHQPLML 60

Query: 61  SVLKLDGSCFDIQVKGSATIAELKGAVEAVFSHMPQDGPGKISWLHVWWHFCLCYDGQKL 120
           SVLKLDGSCFDIQV+ SAT+AELKGAVE VFSHMPQ+GPGKISWLHVWWHFCLCYDGQKL
Sbjct: 61  SVLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKISWLHVWWHFCLCYDGQKL 120

Query: 121 IDDTDYIVNFGIKDGDQLQFVRHVTTGYNIIRKQSKKGLASPKLHSRTSSRSRSCKQNDQ 180
           IDD DYI +FGIKDGDQLQFVRHVTTGYN+IRKQSKK   S KL SR SSRS+S KQNDQ
Sbjct: 121 IDDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVSSKLISRISSRSKSFKQNDQ 180

Query: 181 DDTERYN--YNDIESGLFQHQGNNELFIKHGPKMVVFLGGWLSHTKLSSTGKMSINSLAR 240
            D ERYN  YNDIESG  QH GN++LF+   PKMVVFLGGW SHTKL+S GKMSI SL R
Sbjct: 181 KDMERYNYKYNDIESGRCQHNGNDDLFVNQ-PKMVVFLGGWFSHTKLASAGKMSIKSLVR 240

Query: 241 PLRARPSLVRCFKSLIQLCREKKHYQKVSRKNRSIIGV 274
           P   RPSLV   K+LIQLCREK+HY+KV++K RSIIGV
Sbjct: 241 PSVTRPSLVGGLKNLIQLCREKRHYEKVNKKKRSIIGV 276

[Close]

BLAST of Sed0025607 vs. ExPASy TrEMBL
Match: A0A1S3CR65 (uncharacterized protein LOC103503833 OS=Cucumis melo OX=3656 GN=LOC103503833 PE=4 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.5e-115
Identity = 216/278 (77.70%), Postives = 234/278 (84.17%), Query Frame = 0


Query: 1   MAIHGFCTIDVADFPPP---PTAEKRRRSFSLLSSPLMIVGFPKKKTVLYRQLPHQPLML 60
           MA+ G CT+DV DFPPP    TAEK RRSFSLLSSPLMIVG   +K VLYRQLPHQPLML
Sbjct: 1   MAVDGVCTLDVVDFPPPTSTTTAEKHRRSFSLLSSPLMIVGL-SRKNVLYRQLPHQPLML 60

Query: 61  SVLKLDGSCFDIQVKGSATIAELKGAVEAVFSHMPQDGPGKISWLHVWWHFCLCYDGQKL 120
           SVLKLDGSCFDIQV+ SAT+AELKGAVE VFSHMPQ+GPGKISWLHVWWHFCLCYDGQKL
Sbjct: 61  SVLKLDGSCFDIQVRRSATVAELKGAVELVFSHMPQNGPGKISWLHVWWHFCLCYDGQKL 120

Query: 121 IDDTDYIVNFGIKDGDQLQFVRHVTTGYNIIRKQSKKGLASPKLHSRTSSRSRSCKQNDQ 180
           IDD DYI +FGIKDGDQLQFVRHVTTGYN+IRKQSKK   S KL SR SSRS+S KQNDQ
Sbjct: 121 IDDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKREVSSKLISRISSRSKSFKQNDQ 180

Query: 181 DDTERYN--YNDIESGLFQHQGNNELFIKHGPKMVVFLGGWLSHTKLSSTGKMSINSLAR 240
            D ERYN  YNDIESG  QH GN++LF+   PKMVVFLGGW SHTKL+S GKMSI SL R
Sbjct: 181 KDMERYNYKYNDIESGRCQHNGNDDLFVNQ-PKMVVFLGGWFSHTKLASAGKMSIKSLVR 240

Query: 241 PLRARPSLVRCFKSLIQLCREKKHYQKVSRKNRSIIGV 274
           P   RPSLV   K+LIQLCREK+HY+KV++K RSIIGV
Sbjct: 241 PSVTRPSLVGGLKNLIQLCREKRHYEKVNKKKRSIIGV 276

[Close]

BLAST of Sed0025607 vs. ExPASy TrEMBL
Match: A0A0A0LH97 (Ubiquitin-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G877630 PE=4 SV=1)

HSP 1 Score: 424.5 bits (1090), Expect = 3.4e-115
Identity = 214/278 (76.98%), Postives = 232/278 (83.45%), Query Frame = 0


Query: 1   MAIHGFCTIDVADFPP---PPTAEKRRRSFSLLSSPLMIVGFPKKKTVLYRQLPHQPLML 60
           MA+ G C +DV DFPP     T EK RRSFSLLSSPLMIVG   +K VLYRQLPHQPLML
Sbjct: 1   MAVDGVCALDVVDFPPLQSTTTPEKHRRSFSLLSSPLMIVGL-SRKNVLYRQLPHQPLML 60

Query: 61  SVLKLDGSCFDIQVKGSATIAELKGAVEAVFSHMPQDGPGKISWLHVWWHFCLCYDGQKL 120
           SVLKLDGS FDIQV+ SAT+AELKGAVE VFSHMPQ GPGKISWLHVWWHFCLCY GQKL
Sbjct: 61  SVLKLDGSSFDIQVRRSATVAELKGAVELVFSHMPQHGPGKISWLHVWWHFCLCYAGQKL 120

Query: 121 IDDTDYIVNFGIKDGDQLQFVRHVTTGYNIIRKQSKKGLASPKLHSRTSSRSRSCKQNDQ 180
           +DD DYI +FGIKDGDQLQFVRHVTTGYN+IRKQSKK + S KL SR SSRS+S KQNDQ
Sbjct: 121 VDDADYIASFGIKDGDQLQFVRHVTTGYNVIRKQSKKLVVSSKLISRISSRSKSFKQNDQ 180

Query: 181 DDTERYNYNDIESGLFQHQG--NNELFIKHGPKMVVFLGGWLSHTKLSSTGKMSINSLAR 240
            D ERYNYNDIESG  QH G  NN+LF+ H PKMVVFLGGW SHTKL+S GKMSI SL R
Sbjct: 181 KDMERYNYNDIESGRCQHSGSNNNDLFMNHEPKMVVFLGGWFSHTKLASAGKMSIKSLVR 240

Query: 241 PLRARPSLVRCFKSLIQLCREKKHYQKVSRKNRSIIGV 274
           P   RPSLVR FK+LIQLCREK+HY+KV++K RSIIGV
Sbjct: 241 PSVTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV 277

[Close]

BLAST of Sed0025607 vs. ExPASy TrEMBL
Match: A0A6J1BY98 (uncharacterized protein LOC111006831 OS=Momordica charantia OX=3673 GN=LOC111006831 PE=4 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 3.2e-113
Identity = 211/278 (75.90%), Postives = 231/278 (83.09%), Query Frame = 0


Query: 1   MAIHGFCTIDVADFPPPPTA----EKRRRSFSLL-SSPLMIVGFPKKKTVLYRQLPHQPL 60
           MA+ G C +D+ DFP PP A     KRRRSFSLL SSPLMIVG   +K V YRQLPHQPL
Sbjct: 1   MAVDGVCRLDIGDFPAPPRALSSLAKRRRSFSLLISSPLMIVGL-SRKNVSYRQLPHQPL 60

Query: 61  MLSVLKLDGSCFDIQVKGSATIAELKGAVEAVFSHMPQDGPGKISWLHVWWHFCLCYDGQ 120
            LSVLKLDGSCFDIQVK SAT+AELKGAVEAVFSHMPQDGPGKISWLHVWWHFCLCY G+
Sbjct: 61  HLSVLKLDGSCFDIQVKKSATVAELKGAVEAVFSHMPQDGPGKISWLHVWWHFCLCYAGE 120

Query: 121 KLIDDTDYIVNFGIKDGDQLQFVRHVTTGYNIIRKQSKKGLASPKLHSRTSSRSRSCKQN 180
           KL+DDTDYI NFGIKDGDQLQFVRHVTTGYN+IRKQS + + S KLHSRTSSRS+S K+N
Sbjct: 121 KLVDDTDYIANFGIKDGDQLQFVRHVTTGYNVIRKQSNEYVVSSKLHSRTSSRSKSHKRN 180

Query: 181 DQDDTERYNYNDIESGLFQHQGNNELFIKHGPKMVVFLGGWLSHTKLSSTGKMSINSLAR 240
           DQD     NYNDIE G FQH  N ELF+   PKMVVFLGGW SHTKL+S G+MSINSL R
Sbjct: 181 DQD-----NYNDIEMGRFQHHNNGELFMSPEPKMVVFLGGWFSHTKLASAGRMSINSLVR 240

Query: 241 PLRARPSLVRCFKSLIQLCREKKHYQKVSRKNRSIIGV 274
           P  +RPSLVR FK+L+QLCREK+HYQKVS+K RSII V
Sbjct: 241 PSGSRPSLVRGFKNLVQLCREKRHYQKVSKKKRSIIVV 272

[Close]

BLAST of Sed0025607 vs. TAIR 10
Match: AT4G32270.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 149.8 bits (377), Expect = 3.1e-36
Identity = 71/143 (49.65%), Postives = 99/143 (69.23%), Query Frame = 0


Query: 13  DFPPPPTAEKRRRSFSLLSSPLMIV-GFPKKKTVLYRQLPHQPLMLSVLKLDGSCFDIQV 72
           D PP       RRS +   SPL ++ G P++++  Y Q+P +P+ L+VLKLDGS F IQV
Sbjct: 2   DVPP-------RRSLAASLSPLRLIDGLPRRRSFNYNQMPEEPIKLTVLKLDGSSFGIQV 61

Query: 73  KGSATIAELKGAVEAVFSHMPQDGPGKISWLHVWWHFCLCYDGQKLIDDTDYIVNFGIKD 132
             +AT+ ELK AVEA FSH+P  GPGKISW HVW  FCL Y+ ++LI++++Y+  FGIKD
Sbjct: 62  LKTATVGELKMAVEAAFSHLPISGPGKISWPHVWGQFCLSYEDKRLINESEYLTEFGIKD 121

Query: 133 GDQLQFVRHVTTGYNIIRKQSKK 155
           GDQL+F+RH++    ++ K   K
Sbjct: 122 GDQLRFIRHISNYCMLMVKHKSK 137

[Close]

BLAST of Sed0025607 vs. TAIR 10
Match: AT5G25340.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 137.5 bits (345), Expect = 1.6e-32
Identity = 74/160 (46.25%), Postives = 99/160 (61.88%), Query Frame = 0


Query: 42  KKTVLYRQLPHQPLMLSVLKLDGSCFDIQVKGSATIAELKGAVEAVFSHMPQDGPGKISW 101
           ++T  Y +LP++P+ LSVLKLDGS FD+ V  SAT+ +LK A+E  FSH+P+ GP KISW
Sbjct: 6   RRTFSYDKLPNEPIRLSVLKLDGSSFDVYVLTSATVGDLKVAIETAFSHVPKKGPSKISW 65

Query: 102 LHVWWHFCLCYDGQKLIDDTDYIVNFGIKDGDQLQFVRHV------TTGYNIIRKQSKKG 161
            HVW HFCLC+ GQKLI DTD I N+G+KDGD+++F  HV      + GY+   KQ    
Sbjct: 66  SHVWGHFCLCFGGQKLITDTDCIGNYGMKDGDEVRFKNHVSGNAVLSKGYSRKSKQKNLE 125

Query: 162 LASPKLHSRTSSRSRSCKQNDQDDTER-----YNYNDIES 191
              PK      +R      +  DD ER     Y  +D+E+
Sbjct: 126 RVLPKDGDEVLNRIEEI-DDSWDDLERGGLVMYKDDDMET 164

[Close]

BLAST of Sed0025607 vs. TAIR 10
Match: AT4G32270.2 (Ubiquitin-like superfamily protein )

HSP 1 Score: 123.2 bits (308), Expect = 3.1e-28
Identity = 56/105 (53.33%), Postives = 77/105 (73.33%), Query Frame = 0


Query: 50  LPHQPLMLSVLKLDGSCFDIQVKGSATIAELKGAVEAVFSHMPQDGPGKISWLHVWWHFC 109
           +P +P+ L+VLKLDGS F   V  +AT+ ELK AVEA FSH+P  GPGKISW HVW  FC
Sbjct: 1   MPEEPIKLTVLKLDGSSF---VLKTATVGELKMAVEAAFSHLPISGPGKISWPHVWGQFC 60

Query: 110 LCYDGQKLIDDTDYIVNFGIKDGDQLQFVRHVTTGYNIIRKQSKK 155
           L Y+ ++LI++++Y+  FGIKDGDQL+F+RH++    ++ K   K
Sbjct: 61  LSYEDKRLINESEYLTEFGIKDGDQLRFIRHISNYCMLMVKHKSK 102

[Close]

BLAST of Sed0025607 vs. TAIR 10
Match: AT1G80060.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 112.5 bits (280), Expect = 5.5e-25
Identity = 72/202 (35.64%), Postives = 105/202 (51.98%), Query Frame = 0


Query: 47  YRQLPHQ-PLMLSVLKLDGSCFDIQVKGSATIAELKGAVEAVFSHMPQDGPGKISWLHVW 106
           Y +LP Q  + LSV+KL+GS FD++V    ++AELK AVE VF+  P +G G ISW HVW
Sbjct: 44  YLKLPPQGRIKLSVVKLNGSLFDVEVAKDCSVAELKRAVEQVFTISPLEGHGMISWSHVW 103

Query: 107 WHFCLCYDGQKLIDDTDYIVNFGIKDGDQLQFVRHVTTGYNIIRKQSKKGLASPKLHSRT 166
            HFCLCY  Q+L++D   I   G+ DGDQL FVRH++  ++ + K+SK       L    
Sbjct: 104 GHFCLCYRDQRLVNDKTSIRYLGLNDGDQLHFVRHLSIDHSPMNKRSKSPSCKRYLELDV 163

Query: 167 SS-----RSRSCKQNDQDDTERYNYNDIESGLFQHQGNNELFIKHGPKMVVFLGGWLSHT 226
           SS     + ++  QN  DD     Y   +  L   +           ++V  + GWL + 
Sbjct: 164 SSIVNEIQIQNQNQNGVDDVAEKCYPGAQDELPAAES----------RLVNLIKGWLPY- 223

Query: 227 KLSSTGKMSINSLARPLRARPS 243
                G+  ++      R+ PS
Sbjct: 224 ----AGRWGVSRKGPECRSGPS 230

[Close]

BLAST of Sed0025607 vs. TAIR 10
Match: AT3G07860.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 75.5 bits (184), Expect = 7.5e-14
Identity = 49/165 (29.70%), Postives = 79/165 (47.88%), Query Frame = 0


Query: 9   IDVADFPPPPTAEKRRRSFSLLSSPLMIVGFPKKKTV-----LYRQLPHQPLMLSVLKLD 68
           ++  D+      EK +   S L +  ++   P+  T+     L        + LSV+KLD
Sbjct: 1   MESGDYDVETKREKLKSVLSQLLADPILADVPRNPTLSDVVTLVSLEKGSAMRLSVVKLD 60

Query: 69  GSCFDIQVKGSATIAELKGAVEAVFSHMPQDGPG--KISWLHVWWHFCLCYDGQKLIDDT 128
           GS  D+ V  SAT+ +LK  ++   + M Q   G   ISW HVW +FCL  + +KL+DD 
Sbjct: 61  GSSLDVAVMNSATLKDLKLLIKKKVNEMEQANMGHRHISWKHVWSNFCLSCNNEKLLDDN 120

Query: 129 DYIVNFGIKDGDQLQFVRHVTTGYNIIRKQSKKGLASPKLHSRTS 167
             + + GI++  Q+ F+ +V         + KK      LH  +S
Sbjct: 121 AVLQDVGIRNNSQVTFMPYVMKKGRGRHSKRKKHRLFRSLHKTSS 165

The following BLAST results are available for this feature:

BLAST of Sed0025607 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899214.1	3.3e-120	78.42	uncharacterized protein LOC120086568 [Benincasa hispida]	[more]
KAA0038816.1	8.3e-116	78.06	U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like [Cucumis melo var. m...	[more]
XP_008466420.1	3.2e-115	77.70	PREDICTED: uncharacterized protein LOC103503833 [Cucumis melo] >TYK31439.1 U11/U...	[more]
XP_004136480.1	7.0e-115	76.98	uncharacterized protein LOC101219460 [Cucumis sativus] >KGN60092.1 hypothetical ...	[more]
XP_022134606.1	6.6e-113	75.90	uncharacterized protein LOC111006831 [Momordica charantia]	[more]

BLAST of Sed0025607 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84WS8	1.1e-12	29.70	U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Arabidopsis thaliana O...	[more]
Q9BV90	1.5e-06	31.11	U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Homo sapiens OX=9606 G...	[more]
Q8VIK1	3.3e-06	30.00	U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Mus musculus OX=10090 ...	[more]
Q3ZBQ4	4.3e-06	30.00	U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Bos taurus OX=9913 GN=...	[more]

BLAST of Sed0025607 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T9I3	4.0e-116	78.06	U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like OS=Cucumis melo var....	[more]
A0A5D3E6G8	1.5e-115	77.70	U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like OS=Cucumis melo var....	[more]
A0A1S3CR65	1.5e-115	77.70	uncharacterized protein LOC103503833 OS=Cucumis melo OX=3656 GN=LOC103503833 PE=...	[more]
A0A0A0LH97	3.4e-115	76.98	Ubiquitin-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G877...	[more]
A0A6J1BY98	3.2e-113	75.90	uncharacterized protein LOC111006831 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]

BLAST of Sed0025607 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32270.1	3.1e-36	49.65	Ubiquitin-like superfamily protein	[more]
AT5G25340.1	1.6e-32	46.25	Ubiquitin-like superfamily protein	[more]
AT4G32270.2	3.1e-28	53.33	Ubiquitin-like superfamily protein	[more]
AT1G80060.1	5.5e-25	35.64	Ubiquitin-like superfamily protein	[more]
AT3G07860.1	7.5e-14	29.70	Ubiquitin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR040610	SNRNP25, ubiquitin-like domain	PFAM	PF18036	Ubiquitin_4	coord: 57..141 e-value: 1.1E-24 score: 86.3
IPR040610	SNRNP25, ubiquitin-like domain	CDD	cd17058	Ubl_SNRNP25	coord: 55..140 e-value: 1.95581E-32 score: 112.612
None	No IPR available	GENE3D	3.10.20.90		coord: 51..146 e-value: 2.6E-33 score: 115.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 153..181
None	No IPR available	PANTHER	PTHR14942:SF2	UBIQUITIN-LIKE SUPERFAMILY PROTEIN	coord: 9..264
IPR039690	U11/U12 small nuclear ribonucleoprotein 25kDa protein	PANTHER	PTHR14942	U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN	coord: 9..264
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 51..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0025607.1	Sed0025607.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0005689	U12-type spliceosomal complex