Sed0025597 (gene) Chayote v1

Overview


Name	Sed0025597
Type	gene
Organism	Sechium edule (Chayote v1)
Description	late embryogenesis abundant protein At1g64065
Location	LG05: 5697242 .. 5697844 (-)
RNA-Seq Expression	Sed0025597
Synteny	Sed0025597

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTTGGACGACCGGCCGGCGACACTACGATCAACCCGAAAAACATCCGAAAAATGCATCAACACCTTCTGCATTTGCCTCTTTACCGTCGCCGCCATCACCGCGATCGCGGCGCTGTTTATCGGCCTCGTCATCGTCCGAGTAAAAACCCCAACAGTAAAACTAACCGCCGTGGCAGTAACAAATCTCCACTATGGCTTCTCCCCAACCCCTTTTATGGACGCGACATTAGTCGCCGAAATGGCAATCGAGAATCCGAATTTCGGGCGGTTCGAGTACGAGGAAGAAACGAACGTGACACTGATCTACTACGGCGTGGCGGTCGGGATCGGCGAGGTGAGGAAGGTGCGTGTAAATGCAAAGGGCGTTAAAGAAACGAACTTTACGGTGAAAGTGAAAGAAAATTCGAGCTTTGTGGACGTGGATTATTTCAGCCACGATTTGGCGAGGTTGAAGTCGATGAATATGAGTTGGATCGGCGAGTTTAAGGGAAGGGCTCGTTTGTTGAAATTGTTTAAGGAAAGCAAAGTTTGTGTTTTGAAATGCACTATGACCTTGAATTTGACCTCCCATGCGGTCCAAAATCTTAATTGCTTATAG

mRNA sequence

ATGGCGTTGGACGACCGGCCGGCGACACTACGATCAACCCGAAAAACATCCGAAAAATGCATCAACACCTTCTGCATTTGCCTCTTTACCGTCGCCGCCATCACCGCGATCGCGGCGCTGTTTATCGGCCTCGTCATCGTCCGAGTAAAAACCCCAACAGTAAAACTAACCGCCGTGGCAGTAACAAATCTCCACTATGGCTTCTCCCCAACCCCTTTTATGGACGCGACATTAGTCGCCGAAATGGCAATCGAGAATCCGAATTTCGGGCGGTTCGAGTACGAGGAAGAAACGAACGTGACACTGATCTACTACGGCGTGGCGGTCGGGATCGGCGAGGTGAGGAAGGTGCGTGTAAATGCAAAGGGCGTTAAAGAAACGAACTTTACGGTGAAAGTGAAAGAAAATTCGAGCTTTGTGGACGTGGATTATTTCAGCCACGATTTGGCGAGGTTGAAGTCGATGAATATGAGTTGGATCGGCGAGTTTAAGGGAAGGGCTCGTTTGTTGAAATTGTTTAAGGAAAGCAAAGTTTGTGTTTTGAAATGCACTATGACCTTGAATTTGACCTCCCATGCGGTCCAAAATCTTAATTGCTTATAG

Coding sequence (CDS)

ATGGCGTTGGACGACCGGCCGGCGACACTACGATCAACCCGAAAAACATCCGAAAAATGCATCAACACCTTCTGCATTTGCCTCTTTACCGTCGCCGCCATCACCGCGATCGCGGCGCTGTTTATCGGCCTCGTCATCGTCCGAGTAAAAACCCCAACAGTAAAACTAACCGCCGTGGCAGTAACAAATCTCCACTATGGCTTCTCCCCAACCCCTTTTATGGACGCGACATTAGTCGCCGAAATGGCAATCGAGAATCCGAATTTCGGGCGGTTCGAGTACGAGGAAGAAACGAACGTGACACTGATCTACTACGGCGTGGCGGTCGGGATCGGCGAGGTGAGGAAGGTGCGTGTAAATGCAAAGGGCGTTAAAGAAACGAACTTTACGGTGAAAGTGAAAGAAAATTCGAGCTTTGTGGACGTGGATTATTTCAGCCACGATTTGGCGAGGTTGAAGTCGATGAATATGAGTTGGATCGGCGAGTTTAAGGGAAGGGCTCGTTTGTTGAAATTGTTTAAGGAAAGCAAAGTTTGTGTTTTGAAATGCACTATGACCTTGAATTTGACCTCCCATGCGGTCCAAAATCTTAATTGCTTATAG

Protein sequence

MALDDRPATLRSTRKTSEKCINTFCICLFTVAAITAIAALFIGLVIVRVKTPTVKLTAVAVTNLHYGFSPTPFMDATLVAEMAIENPNFGRFEYEEETNVTLIYYGVAVGIGEVRKVRVNAKGVKETNFTVKVKENSSFVDVDYFSHDLARLKSMNMSWIGEFKGRARLLKLFKESKVCVLKCTMTLNLTSHAVQNLNCL

Homology

[Close]

BLAST of Sed0025597 vs. NCBI nr
Match: XP_023550526.1 (late embryogenesis abundant protein At1g64065 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 299.7 bits (766), Expect = 1.9e-77
Identity = 153/196 (78.06%), Postives = 169/196 (86.22%), Query Frame = 0


Query: 4   DDRPATLRSTRKTSEKCINTFCICLFTVAAITAIAALFIGLVIVRVKTPTVKLTAVAVTN 63
           +DRPATLRS RK SEKCINTFCI LF +AA+  IAAL +GLV+VRVKTPTVKLT+V V N
Sbjct: 8   NDRPATLRSRRKASEKCINTFCIYLFAIAAVACIAALILGLVVVRVKTPTVKLTSVTVKN 67

Query: 64  LHYGFSPTPFMDATLVAEMAIENPNFGRFEYEEETNVTLIYYGVAVGIGEVRKVRVNAKG 123
           LHYGFSPTPFMDATL+AE+ +ENPNFG F+YEE TN TLIYYGVAVGIGEV+ V VNAK 
Sbjct: 68  LHYGFSPTPFMDATLIAEITMENPNFGEFKYEEVTNTTLIYYGVAVGIGEVKTVSVNAKS 127

Query: 124 VKETNFTVKVKENSSFVDVDYFSHDLARLKSMNMSWIGEFKGRARLLKLFKESKVCVLKC 183
            K+ NFTVKVK NSSFVDVDYFSHDLA LK+MNMS I EFKGR RLLKLFKE KV +LKC
Sbjct: 128 NKKANFTVKVKPNSSFVDVDYFSHDLAMLKTMNMSCIAEFKGRVRLLKLFKEKKVSMLKC 187

Query: 184 TMTLNLTSHAVQNLNC 200
           TM+LNL+SH VQNL C
Sbjct: 188 TMSLNLSSHGVQNLAC 203

[Close]

BLAST of Sed0025597 vs. NCBI nr
Match: XP_022970100.1 (late embryogenesis abundant protein At1g64065 [Cucurbita maxima] >KAG6579536.1 Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016995.1 Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 299.3 bits (765), Expect = 2.5e-77
Identity = 153/196 (78.06%), Postives = 168/196 (85.71%), Query Frame = 0


Query: 4   DDRPATLRSTRKTSEKCINTFCICLFTVAAITAIAALFIGLVIVRVKTPTVKLTAVAVTN 63
           +DRPATLRS RK SEKCINTFCI LF +AA+  IAAL +GLV+VRVKTPTVKLT+V V N
Sbjct: 8   NDRPATLRSRRKASEKCINTFCIYLFAIAAVACIAALILGLVVVRVKTPTVKLTSVTVKN 67

Query: 64  LHYGFSPTPFMDATLVAEMAIENPNFGRFEYEEETNVTLIYYGVAVGIGEVRKVRVNAKG 123
           LHYGFSPTPFMDATL+AE+ +ENPNFG F+YEE TN TLIYYGVAVGIGEV+ V VNAK 
Sbjct: 68  LHYGFSPTPFMDATLIAEITMENPNFGEFKYEEVTNTTLIYYGVAVGIGEVKTVSVNAKS 127

Query: 124 VKETNFTVKVKENSSFVDVDYFSHDLARLKSMNMSWIGEFKGRARLLKLFKESKVCVLKC 183
            K  NFTVKVK NSSFVDVDYFSHDLA LK+MNMS I EFKGR RLLKLFKE KV +LKC
Sbjct: 128 NKNANFTVKVKPNSSFVDVDYFSHDLAMLKTMNMSCIAEFKGRVRLLKLFKEKKVSMLKC 187

Query: 184 TMTLNLTSHAVQNLNC 200
           TM+LNL+SH VQNL C
Sbjct: 188 TMSLNLSSHGVQNLAC 203

[Close]

BLAST of Sed0025597 vs. NCBI nr
Match: XP_022929131.1 (late embryogenesis abundant protein At1g64065 [Cucurbita moschata])

HSP 1 Score: 297.0 bits (759), Expect = 1.2e-76
Identity = 152/196 (77.55%), Postives = 167/196 (85.20%), Query Frame = 0


Query: 4   DDRPATLRSTRKTSEKCINTFCICLFTVAAITAIAALFIGLVIVRVKTPTVKLTAVAVTN 63
           +DRPATLRS RK SEKCINTFCI LF +AA+  IAAL +GLV+VRVKTPTVKLT+V V N
Sbjct: 8   NDRPATLRSRRKASEKCINTFCIYLFAIAAVACIAALILGLVVVRVKTPTVKLTSVTVKN 67

Query: 64  LHYGFSPTPFMDATLVAEMAIENPNFGRFEYEEETNVTLIYYGVAVGIGEVRKVRVNAKG 123
           LHYGFSPTPFMDATL+AE+ +ENPNFG F+YEE TN TLIYYGVAVGIGEV+ V VNAK 
Sbjct: 68  LHYGFSPTPFMDATLIAEITMENPNFGEFKYEEVTNTTLIYYGVAVGIGEVKTVSVNAKS 127

Query: 124 VKETNFTVKVKENSSFVDVDYFSHDLARLKSMNMSWIGEFKGRARLLKLFKESKVCVLKC 183
            K+ NF VKVK NSSFVDVDYFSHDLA LK+MNMS I EFKGR RLLKLFKE KV +LKC
Sbjct: 128 NKKANFKVKVKPNSSFVDVDYFSHDLAMLKTMNMSCIAEFKGRVRLLKLFKEKKVSMLKC 187

Query: 184 TMTLNLTSHAVQNLNC 200
           TM+LNL SH VQNL C
Sbjct: 188 TMSLNLNSHGVQNLAC 203

[Close]

BLAST of Sed0025597 vs. NCBI nr
Match: XP_008437351.1 (PREDICTED: late embryogenesis abundant protein At1g64065 [Cucumis melo] >KAA0042715.1 late embryogenesis abundant protein [Cucumis melo var. makuwa])

HSP 1 Score: 263.8 bits (673), Expect = 1.2e-66
Identity = 133/196 (67.86%), Postives = 157/196 (80.10%), Query Frame = 0


Query: 5   DRPATLRSTRKTSEKCINTFCICLFTVAAITAIAALFIGLVIVRVKTPTVKLTAVAVTNL 64
           DRP   RS RK+S+KC+N FCICLF  AA   IAAL  GLV++RVKTPTVKLT+VAV NL
Sbjct: 9   DRPTAHRSRRKSSKKCLNAFCICLFAAAATACIAALTFGLVVLRVKTPTVKLTSVAVKNL 68

Query: 65  HYGFSPTPFMDATLVAEMAIENPNFGRFEYEEETNVTLIYYGVAVGIGEVRKVRVNAKGV 124
           HYGFSPTPFM+ATL  E+ +ENPN+G FEYE   NVTLIYYGV VGIGEV+++ VNAK +
Sbjct: 69  HYGFSPTPFMEATLTGEITMENPNYGAFEYEGVRNVTLIYYGVVVGIGEVKRLSVNAKSI 128

Query: 125 KETNFTVKVKENSSFVDVDYFSHDLARLKSMNMSWIGEFKGRARLLKLFKESKVCVLKCT 184
           ++  F VKVK N  FV+VDYFS DLARLK+MNMSW  EF+G+  LLKLFKE K+ V+KC+
Sbjct: 129 EKRKFIVKVKPNWRFVNVDYFSDDLARLKTMNMSWNAEFEGKIYLLKLFKEKKISVMKCS 188

Query: 185 MTLNLTSHAVQNLNCL 201
            +LNLTSH VQNL CL
Sbjct: 189 TSLNLTSHGVQNLACL 204

[Close]

BLAST of Sed0025597 vs. NCBI nr
Match: XP_022145906.1 (late embryogenesis abundant protein At1g64065 [Momordica charantia])

HSP 1 Score: 260.8 bits (665), Expect = 9.9e-66
Identity = 132/195 (67.69%), Postives = 156/195 (80.00%), Query Frame = 0


Query: 5   DRPATLRSTRKTSEKCINTFCICLFTVAAITAIAALFIGLVIVRVKTPTVKLTAVAVTNL 64
           DRPATLRS R+ SE+CIN  CI LF  AA   +A L +GL +VRVKTPT KL++VAV NL
Sbjct: 9   DRPATLRSRRRASERCINACCIYLFAGAAAACVAVLILGLTVVRVKTPTAKLSSVAVKNL 68

Query: 65  HYGFSPTPFMDATLVAEMAIENPNFGRFEYEEETNVTLIYYGVAVGIGEVRKVRVNAKGV 124
            YGFSP PF+DATL+AE+ IENPNFG F+YEE T+ + IYYGVA GIGEV++V VNAKGV
Sbjct: 69  SYGFSPNPFVDATLIAEVTIENPNFGEFKYEENTDASFIYYGVAAGIGEVKRVSVNAKGV 128

Query: 125 KETNFTVKVKENSSFVDVDYFSHDLARLKSMNMSWIGEFKGRARLLKLFKESKVCVLKCT 184
           K T+F+V+VK N+S  DVDY S+DLA LK MNMS I EF+GR RLLKLFKE KV +LKCT
Sbjct: 129 KRTSFSVEVKTNASVADVDYMSYDLASLKRMNMSCIAEFEGRVRLLKLFKEMKVSLLKCT 188

Query: 185 MTLNLTSHAVQNLNC 200
           MTLN +SHA+ NL C
Sbjct: 189 MTLNFSSHAIHNLAC 203

[Close]

BLAST of Sed0025597 vs. ExPASy Swiss-Prot
Match: Q6DST1 (Late embryogenesis abundant protein At1g64065 OS=Arabidopsis thaliana OX=3702 GN=At1g64065 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.7e-12
Identity = 64/193 (33.16%), Postives = 99/193 (51.30%), Query Frame = 0


Query: 11  RSTRKTSEKCINTFCICLFTVAAITAIAALFIGLVIVRVKTPTVKLTAVAVTNLHYGFSP 70
           R T +   KC+    +   T+  I     L +  + +R+  P ++  +++  +L  G + 
Sbjct: 30  RKTEEPPGKCL----VYSLTIIVIIFALCLILSSIFLRISKPEIETRSISTRDLRSGGNS 89

Query: 71  T-PFMDATLVAEMAIENPNFGRFEYEEET-NVTLIYYGVAVGIGEVRKVRVNAKGVKETN 130
           T P+ +ATLV++++I N NFG FE+E+ T  V    +GV VG  ++   RV A   K   
Sbjct: 90  TNPYFNATLVSDISIRNSNFGAFEFEDSTLRVVYADHGV-VGETKIEGRRVEAH--KTVR 149

Query: 131 FTVKVKENSSF--VDVDYFSHDLARLKSMNMSWIGEFKGRARLLKLFKESKVCVLKCTMT 190
            T  V E  SF  +D      DL RL  + +  + E +GR ++L   K  KV V+ CTM 
Sbjct: 150 ITGVVVEIGSFRLLDTKDLDKDL-RLGFLELRSVAEVRGRIKVLGR-KRWKVSVMSCTMR 209

Query: 191 LNLTSHAVQNLNC 200
           LNLT   +QNL C
Sbjct: 210 LNLTGRFIQNLLC 213

[Close]

BLAST of Sed0025597 vs. ExPASy TrEMBL
Match: A0A6J1I1W2 (late embryogenesis abundant protein At1g64065 OS=Cucurbita maxima OX=3661 GN=LOC111469093 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.2e-77
Identity = 153/196 (78.06%), Postives = 168/196 (85.71%), Query Frame = 0


Query: 4   DDRPATLRSTRKTSEKCINTFCICLFTVAAITAIAALFIGLVIVRVKTPTVKLTAVAVTN 63
           +DRPATLRS RK SEKCINTFCI LF +AA+  IAAL +GLV+VRVKTPTVKLT+V V N
Sbjct: 8   NDRPATLRSRRKASEKCINTFCIYLFAIAAVACIAALILGLVVVRVKTPTVKLTSVTVKN 67

Query: 64  LHYGFSPTPFMDATLVAEMAIENPNFGRFEYEEETNVTLIYYGVAVGIGEVRKVRVNAKG 123
           LHYGFSPTPFMDATL+AE+ +ENPNFG F+YEE TN TLIYYGVAVGIGEV+ V VNAK 
Sbjct: 68  LHYGFSPTPFMDATLIAEITMENPNFGEFKYEEVTNTTLIYYGVAVGIGEVKTVSVNAKS 127

Query: 124 VKETNFTVKVKENSSFVDVDYFSHDLARLKSMNMSWIGEFKGRARLLKLFKESKVCVLKC 183
            K  NFTVKVK NSSFVDVDYFSHDLA LK+MNMS I EFKGR RLLKLFKE KV +LKC
Sbjct: 128 NKNANFTVKVKPNSSFVDVDYFSHDLAMLKTMNMSCIAEFKGRVRLLKLFKEKKVSMLKC 187

Query: 184 TMTLNLTSHAVQNLNC 200
           TM+LNL+SH VQNL C
Sbjct: 188 TMSLNLSSHGVQNLAC 203

[Close]

BLAST of Sed0025597 vs. ExPASy TrEMBL
Match: A0A6J1EM85 (late embryogenesis abundant protein At1g64065 OS=Cucurbita moschata OX=3662 GN=LOC111435804 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 6.0e-77
Identity = 152/196 (77.55%), Postives = 167/196 (85.20%), Query Frame = 0


Query: 4   DDRPATLRSTRKTSEKCINTFCICLFTVAAITAIAALFIGLVIVRVKTPTVKLTAVAVTN 63
           +DRPATLRS RK SEKCINTFCI LF +AA+  IAAL +GLV+VRVKTPTVKLT+V V N
Sbjct: 8   NDRPATLRSRRKASEKCINTFCIYLFAIAAVACIAALILGLVVVRVKTPTVKLTSVTVKN 67

Query: 64  LHYGFSPTPFMDATLVAEMAIENPNFGRFEYEEETNVTLIYYGVAVGIGEVRKVRVNAKG 123
           LHYGFSPTPFMDATL+AE+ +ENPNFG F+YEE TN TLIYYGVAVGIGEV+ V VNAK 
Sbjct: 68  LHYGFSPTPFMDATLIAEITMENPNFGEFKYEEVTNTTLIYYGVAVGIGEVKTVSVNAKS 127

Query: 124 VKETNFTVKVKENSSFVDVDYFSHDLARLKSMNMSWIGEFKGRARLLKLFKESKVCVLKC 183
            K+ NF VKVK NSSFVDVDYFSHDLA LK+MNMS I EFKGR RLLKLFKE KV +LKC
Sbjct: 128 NKKANFKVKVKPNSSFVDVDYFSHDLAMLKTMNMSCIAEFKGRVRLLKLFKEKKVSMLKC 187

Query: 184 TMTLNLTSHAVQNLNC 200
           TM+LNL SH VQNL C
Sbjct: 188 TMSLNLNSHGVQNLAC 203

[Close]

BLAST of Sed0025597 vs. ExPASy TrEMBL
Match: A0A5A7TMT1 (Late embryogenesis abundant protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002130 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 5.6e-67
Identity = 133/196 (67.86%), Postives = 157/196 (80.10%), Query Frame = 0


Query: 5   DRPATLRSTRKTSEKCINTFCICLFTVAAITAIAALFIGLVIVRVKTPTVKLTAVAVTNL 64
           DRP   RS RK+S+KC+N FCICLF  AA   IAAL  GLV++RVKTPTVKLT+VAV NL
Sbjct: 9   DRPTAHRSRRKSSKKCLNAFCICLFAAAATACIAALTFGLVVLRVKTPTVKLTSVAVKNL 68

Query: 65  HYGFSPTPFMDATLVAEMAIENPNFGRFEYEEETNVTLIYYGVAVGIGEVRKVRVNAKGV 124
           HYGFSPTPFM+ATL  E+ +ENPN+G FEYE   NVTLIYYGV VGIGEV+++ VNAK +
Sbjct: 69  HYGFSPTPFMEATLTGEITMENPNYGAFEYEGVRNVTLIYYGVVVGIGEVKRLSVNAKSI 128

Query: 125 KETNFTVKVKENSSFVDVDYFSHDLARLKSMNMSWIGEFKGRARLLKLFKESKVCVLKCT 184
           ++  F VKVK N  FV+VDYFS DLARLK+MNMSW  EF+G+  LLKLFKE K+ V+KC+
Sbjct: 129 EKRKFIVKVKPNWRFVNVDYFSDDLARLKTMNMSWNAEFEGKIYLLKLFKEKKISVMKCS 188

Query: 185 MTLNLTSHAVQNLNCL 201
            +LNLTSH VQNL CL
Sbjct: 189 TSLNLTSHGVQNLACL 204

[Close]

BLAST of Sed0025597 vs. ExPASy TrEMBL
Match: A0A1S3AUE7 (late embryogenesis abundant protein At1g64065 OS=Cucumis melo OX=3656 GN=LOC103482795 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 5.6e-67
Identity = 133/196 (67.86%), Postives = 157/196 (80.10%), Query Frame = 0


Query: 5   DRPATLRSTRKTSEKCINTFCICLFTVAAITAIAALFIGLVIVRVKTPTVKLTAVAVTNL 64
           DRP   RS RK+S+KC+N FCICLF  AA   IAAL  GLV++RVKTPTVKLT+VAV NL
Sbjct: 9   DRPTAHRSRRKSSKKCLNAFCICLFAAAATACIAALTFGLVVLRVKTPTVKLTSVAVKNL 68

Query: 65  HYGFSPTPFMDATLVAEMAIENPNFGRFEYEEETNVTLIYYGVAVGIGEVRKVRVNAKGV 124
           HYGFSPTPFM+ATL  E+ +ENPN+G FEYE   NVTLIYYGV VGIGEV+++ VNAK +
Sbjct: 69  HYGFSPTPFMEATLTGEITMENPNYGAFEYEGVRNVTLIYYGVVVGIGEVKRLSVNAKSI 128

Query: 125 KETNFTVKVKENSSFVDVDYFSHDLARLKSMNMSWIGEFKGRARLLKLFKESKVCVLKCT 184
           ++  F VKVK N  FV+VDYFS DLARLK+MNMSW  EF+G+  LLKLFKE K+ V+KC+
Sbjct: 129 EKRKFIVKVKPNWRFVNVDYFSDDLARLKTMNMSWNAEFEGKIYLLKLFKEKKISVMKCS 188

Query: 185 MTLNLTSHAVQNLNCL 201
            +LNLTSH VQNL CL
Sbjct: 189 TSLNLTSHGVQNLACL 204

[Close]

BLAST of Sed0025597 vs. ExPASy TrEMBL
Match: A0A6J1CXS7 (late embryogenesis abundant protein At1g64065 OS=Momordica charantia OX=3673 GN=LOC111015254 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 4.8e-66
Identity = 132/195 (67.69%), Postives = 156/195 (80.00%), Query Frame = 0


Query: 5   DRPATLRSTRKTSEKCINTFCICLFTVAAITAIAALFIGLVIVRVKTPTVKLTAVAVTNL 64
           DRPATLRS R+ SE+CIN  CI LF  AA   +A L +GL +VRVKTPT KL++VAV NL
Sbjct: 9   DRPATLRSRRRASERCINACCIYLFAGAAAACVAVLILGLTVVRVKTPTAKLSSVAVKNL 68

Query: 65  HYGFSPTPFMDATLVAEMAIENPNFGRFEYEEETNVTLIYYGVAVGIGEVRKVRVNAKGV 124
            YGFSP PF+DATL+AE+ IENPNFG F+YEE T+ + IYYGVA GIGEV++V VNAKGV
Sbjct: 69  SYGFSPNPFVDATLIAEVTIENPNFGEFKYEENTDASFIYYGVAAGIGEVKRVSVNAKGV 128

Query: 125 KETNFTVKVKENSSFVDVDYFSHDLARLKSMNMSWIGEFKGRARLLKLFKESKVCVLKCT 184
           K T+F+V+VK N+S  DVDY S+DLA LK MNMS I EF+GR RLLKLFKE KV +LKCT
Sbjct: 129 KRTSFSVEVKTNASVADVDYMSYDLASLKRMNMSCIAEFEGRVRLLKLFKEMKVSLLKCT 188

Query: 185 MTLNLTSHAVQNLNC 200
           MTLN +SHA+ NL C
Sbjct: 189 MTLNFSSHAIHNLAC 203

[Close]

BLAST of Sed0025597 vs. TAIR 10
Match: AT1G64065.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 74.3 bits (181), Expect = 1.2e-13
Identity = 64/193 (33.16%), Postives = 99/193 (51.30%), Query Frame = 0


Query: 11  RSTRKTSEKCINTFCICLFTVAAITAIAALFIGLVIVRVKTPTVKLTAVAVTNLHYGFSP 70
           R T +   KC+    +   T+  I     L +  + +R+  P ++  +++  +L  G + 
Sbjct: 30  RKTEEPPGKCL----VYSLTIIVIIFALCLILSSIFLRISKPEIETRSISTRDLRSGGNS 89

Query: 71  T-PFMDATLVAEMAIENPNFGRFEYEEET-NVTLIYYGVAVGIGEVRKVRVNAKGVKETN 130
           T P+ +ATLV++++I N NFG FE+E+ T  V    +GV VG  ++   RV A   K   
Sbjct: 90  TNPYFNATLVSDISIRNSNFGAFEFEDSTLRVVYADHGV-VGETKIEGRRVEAH--KTVR 149

Query: 131 FTVKVKENSSF--VDVDYFSHDLARLKSMNMSWIGEFKGRARLLKLFKESKVCVLKCTMT 190
            T  V E  SF  +D      DL RL  + +  + E +GR ++L   K  KV V+ CTM 
Sbjct: 150 ITGVVVEIGSFRLLDTKDLDKDL-RLGFLELRSVAEVRGRIKVLGR-KRWKVSVMSCTMR 209

Query: 191 LNLTSHAVQNLNC 200
           LNLT   +QNL C
Sbjct: 210 LNLTGRFIQNLLC 213

[Close]

BLAST of Sed0025597 vs. TAIR 10
Match: AT2G44000.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 52.4 bits (124), Expect = 5.0e-07
Identity = 51/179 (28.49%), Postives = 82/179 (45.81%), Query Frame = 0


Query: 26  ICLFTVAAITAIAALFIGLVIVRVKTP-TVKLTAVAVTNLHY----GFSPTPFMDATLVA 85
           I +F +A +  +  +FI +    +  P T  LT+V V NL Y      S + + +ATL  
Sbjct: 34  IIIFILAGLCMLLFIFIVIGFFFIAKPLTASLTSVEVRNLRYNNNTSSSSSLYFNATLAM 93

Query: 86  EMAIENPNFGRFEYEEETNVTLIYYGVAVGIGEVRKVRVNAKGVKETNFTVKVKENSSFV 145
           E+ IENPN G FE+       ++Y G  VG   +   RV + G   T  + +V    +  
Sbjct: 94  EIRIENPNLGFFEFPTSRG-EILYNGDVVGEMRINGQRVASFGDLRTEVSAEVAYRGNQK 153

Query: 146 DVDYFSHDLARLKSMNMSWIGEFKGRARLLKLFKESKVCVLKCTMTLNLTSHAVQNLNC 200
              +  +D+ R + + +    + +G   L  L K  +   LKC M LNL+   +  L C
Sbjct: 154 SPVWLKNDIER-RLIILETRAKLRGEVHLKDLNK--RTVNLKCLMQLNLSDDVIHRLWC 208

The following BLAST results are available for this feature:

BLAST of Sed0025597 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023550526.1	1.9e-77	78.06	late embryogenesis abundant protein At1g64065 [Cucurbita pepo subsp. pepo]	[more]
XP_022970100.1	2.5e-77	78.06	late embryogenesis abundant protein At1g64065 [Cucurbita maxima] >KAG6579536.1 L...	[more]
XP_022929131.1	1.2e-76	77.55	late embryogenesis abundant protein At1g64065 [Cucurbita moschata]	[more]
XP_008437351.1	1.2e-66	67.86	PREDICTED: late embryogenesis abundant protein At1g64065 [Cucumis melo] >KAA0042...	[more]
XP_022145906.1	9.9e-66	67.69	late embryogenesis abundant protein At1g64065 [Momordica charantia]	[more]

BLAST of Sed0025597 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6DST1	1.7e-12	33.16	Late embryogenesis abundant protein At1g64065 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Sed0025597 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I1W2	1.2e-77	78.06	late embryogenesis abundant protein At1g64065 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1EM85	6.0e-77	77.55	late embryogenesis abundant protein At1g64065 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A5A7TMT1	5.6e-67	67.86	Late embryogenesis abundant protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A1S3AUE7	5.6e-67	67.86	late embryogenesis abundant protein At1g64065 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A6J1CXS7	4.8e-66	67.69	late embryogenesis abundant protein At1g64065 OS=Momordica charantia OX=3673 GN=...	[more]

BLAST of Sed0025597 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64065.1	1.2e-13	33.16	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G44000.1	5.0e-07	28.49	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31852:SF157	LATE EMBRYOGENESIS ABUNDANT PROTEIN	coord: 13..199
None	No IPR available	PANTHER	PTHR31852	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 13..199

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0025597.1	Sed0025597.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane