Sed0025547 (gene) Chayote v1

Overview
NameSed0025547
Typegene
OrganismSechium edule (Chayote v1)
Description40S ribosomal protein S5-like
LocationLG12: 9699984 .. 9702815 (+)
RNA-Seq ExpressionSed0025547
SyntenySed0025547
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCGAGTTACGTGTTTTTTATTATATGCCCTCTTAAAAGCCAGCTTATAAGTTCATAGCCGTCGAATCCACAATTTTCCTCCTCCCTTTTGCTCGTCGCCGTTCTTAGTAAGTTTTTTTTCTTCCTAAACACTCTCCAATCTTCTTCCTTGTTCTGCCATCAATGTCTTCAATTGCTGTTTTTTTCGGGTCTCTGTTCGAGATTGTTTTTGTGCCTAGTTTTCAGTAATGCCATTGCAGCCTCGTGGTTTTTTTGTACATGTGTTTGAAAATTTGTTCTTTGATCTGCGTCTCATTATTGATTTTAATCCCTTTTTTGTTTATTTAACTCAGTGGTTGTGTTGTTGTTACCACTTTATTGCATTTTCTGAGAGTCTCTTATTGGTAGTAAGGTTTGTATGAGCTTACAGTCTTTCAGTTTTTGTTCTAAGAATTGTCTGAACACAAATGGGCTTTGGTTGTATTCTTCCGTTTAATTCTAACTTATAAATTTTTTCTTAACAGAAATGGCTGAAGCTATCGAAGTGGTTCAGGAACTCACCCAGCCTCACCTGGATGTCAAGCTTTTCAATCGCTGGACCTTTGATGATGTTCAGGTTTCTATTTTTTTAGAGTGGGATTATTAAGAAAAATAGTGTTAGTAAATGTTATTTTTTGGGTTTTCATAGAACAGAAAACCATAAATGCAAGTATTTTAACCTAGTAAAATTAATTTGTTATGTCCCCAAAGGGTAGCGCAGTGATTGAAGACTTGAGCTTTTGAGGGTATGCTCTCTTCAAGATTCTGGGTTCGAGACTCATCATTGACATTACTCCTTCGATATCTCTGGTGCCAGGGATGGGCGTGGGTACCCTTTTCAAAAAAAAAAAAAAGTTATAATCAGTAATAGGATGGAGCCCACATTTTTACCTAAGATTTGTGCCTTGAGCCTGAGTGCGAGCTGGATCGAGCATTTTAAAGCACTTCTCTATTCACCCTCTTAATACTTATGAAATATAATATTAGAGTTTGAGAACAACTTTGTGCAAATCTGTCTTCGCTATTAAGGAGTTGCTTAATTGAAATTTTGTTCTTACCTTTGGTTGGGTTGGTGATAATTTGTACCATTGTGTTCCACTTATATGCTTGTTATAATGGACAATGGTAGTGGTCATATAGGTTAATGACATATCTCTGGTGGACTATGTTGGAGTTGCATCTTCCAAGCATGCTACTTATGTTCCACACACAGCTGGTCGATATTCCGTGAAGCGTTTCAGGAAAGCTCAATGCCCAATTGTGGAGAGACTTACTAACTCACTTATGATGCATGGAAGAAACAATGGGAAGAAGCTTATGGCCGTGAGGATTATTAAGCATACCATGGAGATTATTCATCTACTAACTGATCTAAATCCAGTTCAAGTTATTGTTGATGCTGTTGTTAACAGGTATGCATATTGGGTCCTCTGAATTCCACTCATGTCGTGTTTATGTTATACCGTGGTAACTTCTTGGGTAAATGGTGAACTTTGTCCCTATGGTTTCAGCACCTTATGGTTTTTATAAGTTTTAGTTTCTTCGTTTTATTATCCCTATGAGTTGTTCTATAGTTTTTAAGTTTTCTTTATTTGGTCCCTATGATTTTTTATTTATTTTTATTTTTTGTCAATTCGGTCTTCATGGGTTTAAAAGATTCCATTTAGTTCTTATGATTTATGGGTTGTTTAAGTTTGGTCTCTGTGACTATTAGATTTTATTGTTTTAGAATTCTTAACTTGGTTTGTTTTAGTTAAACTTCAATAATCATCTGTCCATTATCATTTTGACATATACTTTTCATGTGGTAAATGTGATTAGTTGATTGGATTGGAGTATAAAGCTAACTAAAAATAAGTAGGACAACACAATTTAAGGATAATTTGAGAGATCTAAGGAAATCTTATAAAAAAATTTGTAACTAACTTAAACCAATGGGACCATATTTTTTAATTTAACCTAATCTGGATGTTCATTCATCTATTTAAAGAGATTTGTTTCATTCATCTATTTTTTAAAGAGATTTGGTACCTGATTTATTGGAACCAATTTCTCATTAGTGTCGCATCCAAGTCAAAGTCCTGAATAGACATCATTGTGATGCTGCAATTTTTGAGTTTTGAGTTCCCTCATTTATCATATTTGTTTACATGTGATTTGGCAGTGGACCCCGAGAAGATGCTACTCGTATTGGTTCAGCTGGTGTTGTTAGGCGTCAAGCTGTGGATATCTCCCCTCTACGACGTGTAAACCAAGCAATATACCTTCTTACGACTGGTGCTCGTGAGGCTGCTTTCAGAAACATCAAGACAATTGCAGAGTGTTTGGCTGATGAACTCATCAACGCTGCAAAGGGATCATCAAACAGGTCAATTTACATCTCCTCTTCTTACTAATTTATCATCCAGCCATCCCTGCACTATATGTCATTGTGTTTTTCTGTTCTTTCAGTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAATCGTTAAGGACGGTTGGGAAAAGAGAGAGCTCAAAGGTTCGTCAAGAGCTTCATTTTTGTTCTTTCCAATGCTGATATTATCTTATATAGTTCAATGTTTCTATAGACATGGTTGTCCTCAACCTTTTGTTCCCTTTTCCTAATAGCAAGAATTCGTCCAATTCTTGATTAAGCTTTAAGGGGGGCATTGATACTAATAGGACTTGAACTATTTGCATTTGGCTAGAATGTTAGGGTTCATGTGATTTAGACCATTATTTTGTAAGCAGTTGATAATTTATCATATGGATATTTAGAGTACTTTGATACCTATTT

mRNA sequence

CCCGAGTTACGTGTTTTTTATTATATGCCCTCTTAAAAGCCAGCTTATAAGTTCATAGCCGTCGAATCCACAATTTTCCTCCTCCCTTTTGCTCGTCGCCGTTCTTAAAATGGCTGAAGCTATCGAAGTGGTTCAGGAACTCACCCAGCCTCACCTGGATGTCAAGCTTTTCAATCGCTGGACCTTTGATGATGTTCAGGTTAATGACATATCTCTGGTGGACTATGTTGGAGTTGCATCTTCCAAGCATGCTACTTATGTTCCACACACAGCTGGTCGATATTCCGTGAAGCGTTTCAGGAAAGCTCAATGCCCAATTGTGGAGAGACTTACTAACTCACTTATGATGCATGGAAGAAACAATGGGAAGAAGCTTATGGCCGTGAGGATTATTAAGCATACCATGGAGATTATTCATCTACTAACTGATCTAAATCCAGTTCAAGTTATTGTTGATGCTGTTGTTAACAGTGGACCCCGAGAAGATGCTACTCGTATTGGTTCAGCTGGTGTTGTTAGGCGTCAAGCTGTGGATATCTCCCCTCTACGACGTGTAAACCAAGCAATATACCTTCTTACGACTGGTGCTCGTGAGGCTGCTTTCAGAAACATCAAGACAATTGCAGAGTGTTTGGCTGATGAACTCATCAACGCTGCAAAGGGATCATCAAACAGTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAATCGTTAAGGACGGTTGGGAAAAGAGAGAGCTCAAAGGTTCGTCAAGAGCTTCATTTTTGTTCTTTCCAATGCTGATATTATCTTATATAGTTCAATGTTTCTATAGACATGGTTGTCCTCAACCTTTTGTTCCCTTTTCCTAATAGCAAGAATTCGTCCAATTCTTGATTAAGCTTTAAGGGGGGCATTGATACTAATAGGACTTGAACTATTTGCATTTGGCTAGAATGTTAGGGTTCATGTGATTTAGACCATTATTTTGTAAGCAGTTGATAATTTATCATATGGATATTTAGAGTACTTTGATACCTATTT

Coding sequence (CDS)

ATGGCTGAAGCTATCGAAGTGGTTCAGGAACTCACCCAGCCTCACCTGGATGTCAAGCTTTTCAATCGCTGGACCTTTGATGATGTTCAGGTTAATGACATATCTCTGGTGGACTATGTTGGAGTTGCATCTTCCAAGCATGCTACTTATGTTCCACACACAGCTGGTCGATATTCCGTGAAGCGTTTCAGGAAAGCTCAATGCCCAATTGTGGAGAGACTTACTAACTCACTTATGATGCATGGAAGAAACAATGGGAAGAAGCTTATGGCCGTGAGGATTATTAAGCATACCATGGAGATTATTCATCTACTAACTGATCTAAATCCAGTTCAAGTTATTGTTGATGCTGTTGTTAACAGTGGACCCCGAGAAGATGCTACTCGTATTGGTTCAGCTGGTGTTGTTAGGCGTCAAGCTGTGGATATCTCCCCTCTACGACGTGTAAACCAAGCAATATACCTTCTTACGACTGGTGCTCGTGAGGCTGCTTTCAGAAACATCAAGACAATTGCAGAGTGTTTGGCTGATGAACTCATCAACGCTGCAAAGGGATCATCAAACAGTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAATCGTTAA

Protein sequence

MAEAIEVVQELTQPHLDVKLFNRWTFDDVQVNDISLVDYVGVASSKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPVQVIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR
Homology
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BLAST of Sed0025547 vs. NCBI nr
Match: XP_022151463.1 (40S ribosomal protein S5-like [Momordica charantia] >XP_022151465.1 40S ribosomal protein S5-like [Momordica charantia])

HSP 1 Score: 387.9 bits (995), Expect = 5.5e-104
Identity = 198/206 (96.12%), Postives = 203/206 (98.54%), Query Frame = 0 

Query: 1   MAEAIEVVQELTQPHLDVKLFNRWTFDDVQVNDISLVDYVGVASSKHATYVPHTAGRYSV 60
           MA+A+EVVQELTQPH DVK+FNRWTFDDVQVNDISLVDYVGVA +KHATYVPHTAGRYSV
Sbjct: 1   MADAVEVVQELTQPHHDVKIFNRWTFDDVQVNDISLVDYVGVAPAKHATYVPHTAGRYSV 60

Query: 61  KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPVQVIVDAVVN 120
           KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKH MEIIHLLTDLNP+QVIVDAVVN
Sbjct: 61  KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVN 120

Query: 121 SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELI 180
           SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELI
Sbjct: 121 SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELI 180

Query: 181 NAAKGSSNSYAIKKKDEIERVAKANR 207
           NAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 NAAKGSSNSYAIKKKDEIERVAKANR 206

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BLAST of Sed0025547 vs. NCBI nr
Match: KAG6596653.1 (40S ribosomal protein S5-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 385.2 bits (988), Expect = 3.6e-103
Identity = 197/206 (95.63%), Postives = 202/206 (98.06%), Query Frame = 0 

Query: 1   MAEAIEVVQELTQPHLDVKLFNRWTFDDVQVNDISLVDYVGVASSKHATYVPHTAGRYSV 60
           MAEA+EVVQEL QPH DVKLFNRWTFDDVQVND+SL DY+GVA SKHATYVPHTAGRYS+
Sbjct: 626 MAEAVEVVQELIQPHHDVKLFNRWTFDDVQVNDMSLGDYIGVAPSKHATYVPHTAGRYSM 685

Query: 61  KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPVQVIVDAVVN 120
           KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNP+QVIVDAVVN
Sbjct: 686 KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPIQVIVDAVVN 745

Query: 121 SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELI 180
           SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELI
Sbjct: 746 SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELI 805

Query: 181 NAAKGSSNSYAIKKKDEIERVAKANR 207
           NAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 806 NAAKGSSNSYAIKKKDEIERVAKANR 831

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BLAST of Sed0025547 vs. NCBI nr
Match: XP_022941782.1 (40S ribosomal protein S5-like [Cucurbita moschata] >XP_023005184.1 40S ribosomal protein S5-like [Cucurbita maxima] >XP_023540373.1 40S ribosomal protein S5-like [Cucurbita pepo subsp. pepo] >XP_023540374.1 40S ribosomal protein S5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 385.2 bits (988), Expect = 3.6e-103
Identity = 197/206 (95.63%), Postives = 202/206 (98.06%), Query Frame = 0 

Query: 1   MAEAIEVVQELTQPHLDVKLFNRWTFDDVQVNDISLVDYVGVASSKHATYVPHTAGRYSV 60
           MAEA+EVVQEL QPH DVKLFNRWTFDDVQVND+SL DY+GVA SKHATYVPHTAGRYS+
Sbjct: 1   MAEAVEVVQELIQPHHDVKLFNRWTFDDVQVNDMSLGDYIGVAPSKHATYVPHTAGRYSM 60

Query: 61  KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPVQVIVDAVVN 120
           KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNP+QVIVDAVVN
Sbjct: 61  KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPIQVIVDAVVN 120

Query: 121 SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELI 180
           SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELI
Sbjct: 121 SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELI 180

Query: 181 NAAKGSSNSYAIKKKDEIERVAKANR 207
           NAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 NAAKGSSNSYAIKKKDEIERVAKANR 206

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BLAST of Sed0025547 vs. NCBI nr
Match: XP_022157995.1 (40S ribosomal protein S5-like [Momordica charantia])

HSP 1 Score: 379.4 bits (973), Expect = 2.0e-101
Identity = 195/206 (94.66%), Postives = 198/206 (96.12%), Query Frame = 0 

Query: 1   MAEAIEVVQELTQPHLDVKLFNRWTFDDVQVNDISLVDYVGVASSKHATYVPHTAGRYSV 60
           M   +E  QELTQPH DVKLFNRWTFDDVQVNDISLVDYVGVA +KHATYVPHTAGRYSV
Sbjct: 1   MEVVVEADQELTQPHHDVKLFNRWTFDDVQVNDISLVDYVGVAPAKHATYVPHTAGRYSV 60

Query: 61  KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPVQVIVDAVVN 120
           KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKH MEIIHLLTDLNP+QVIVDAVVN
Sbjct: 61  KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVN 120

Query: 121 SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELI 180
           SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELI
Sbjct: 121 SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELI 180

Query: 181 NAAKGSSNSYAIKKKDEIERVAKANR 207
           NAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 NAAKGSSNSYAIKKKDEIERVAKANR 206

[Close]
BLAST of Sed0025547 vs. NCBI nr
Match: XP_008447165.1 (PREDICTED: 40S ribosomal protein S5-like isoform X2 [Cucumis melo] >KAA0040833.1 40S ribosomal protein S5-like isoform X2 [Cucumis melo var. makuwa] >TYK17809.1 40S ribosomal protein S5-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 379.4 bits (973), Expect = 2.0e-101
Identity = 197/207 (95.17%), Postives = 201/207 (97.10%), Query Frame = 0 

Query: 1   MAEAIEVV-QELTQPHLDVKLFNRWTFDDVQVNDISLVDYVGVASSKHATYVPHTAGRYS 60
           MA  I+VV QELTQPH DVKLFNRWTFDDVQVNDISLVDY+GVA +KHATYVPHTAGRYS
Sbjct: 1   MAVEIDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 60

Query: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPVQVIVDAVV 120
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKH MEIIHLLTDLNP+QVIVDAVV
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120

Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180

Query: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207

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BLAST of Sed0025547 vs. ExPASy Swiss-Prot
Match: O65731 (40S ribosomal protein S5 (Fragment) OS=Cicer arietinum OX=3827 GN=RPS5 PE=2 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 4.4e-96
Identity = 177/191 (92.67%), Postives = 187/191 (97.91%), Query Frame = 0 

Query: 16  LDVKLFNRWTFDDVQVNDISLVDYVGVASSKHATYVPHTAGRYSVKRFRKAQCPIVERLT 75
           ++VKLFNRW+FDDVQ++D+SL+DY+GV  SKHATYVPHTAGRYSVKRFRKAQCPIVERLT
Sbjct: 7   IEVKLFNRWSFDDVQLSDVSLIDYIGVVPSKHATYVPHTAGRYSVKRFRKAQCPIVERLT 66

Query: 76  NSLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPVQVIVDAVVNSGPREDATRIGSAGV 135
           NSLMMHGRNNGKKLMAVRIIKH MEIIHLLTD NP+QVIVDAVVNSGPREDATRIGSAGV
Sbjct: 67  NSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVVNSGPREDATRIGSAGV 126

Query: 136 VRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKK 195
           VRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIK+IAECLADELINAAKGSSNSYAIKKK
Sbjct: 127 VRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKSIAECLADELINAAKGSSNSYAIKKK 186

Query: 196 DEIERVAKANR 207
           DEIERVAKANR
Sbjct: 187 DEIERVAKANR 197

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BLAST of Sed0025547 vs. ExPASy Swiss-Prot
Match: Q9ZUT9 (40S ribosomal protein S5-1 OS=Arabidopsis thaliana OX=3702 GN=RPS5A PE=1 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 5.7e-96
Identity = 179/201 (89.05%), Postives = 191/201 (95.02%), Query Frame = 0 

Query: 6   EVVQELTQPHLDVKLFNRWTFDDVQVNDISLVDYVGVASSKHATYVPHTAGRYSVKRFRK 65
           E+ Q+LT    +VKLFNRW+FDDV V DISLVDY+GV  SKHAT+VPHTAGRYSVKRFRK
Sbjct: 10  EIQQQLTN---EVKLFNRWSFDDVSVTDISLVDYIGVQPSKHATFVPHTAGRYSVKRFRK 69

Query: 66  AQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPVQVIVDAVVNSGPRE 125
           AQCPIVERLTNSLMMHGRNNGKKLMAVRI+KH MEIIHLL+DLNP+QVI+DA+VNSGPRE
Sbjct: 70  AQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIVNSGPRE 129

Query: 126 DATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKG 185
           DATRIGSAGVVRRQAVDISPLRRVNQAI+LLTTGAREAAFRNIKTIAECLADELINAAKG
Sbjct: 130 DATRIGSAGVVRRQAVDISPLRRVNQAIFLLTTGAREAAFRNIKTIAECLADELINAAKG 189

Query: 186 SSNSYAIKKKDEIERVAKANR 207
           SSNSYAIKKKDEIERVAKANR
Sbjct: 190 SSNSYAIKKKDEIERVAKANR 207

[Close]
BLAST of Sed0025547 vs. ExPASy Swiss-Prot
Match: P51427 (40S ribosomal protein S5-2 OS=Arabidopsis thaliana OX=3702 GN=RPS5B PE=1 SV=2)

HSP 1 Score: 350.1 bits (897), Expect = 1.7e-95
Identity = 179/207 (86.47%), Postives = 194/207 (93.72%), Query Frame = 0 

Query: 1   MAEAIEVVQELTQPHL-DVKLFNRWTFDDVQVNDISLVDYVGVASSKHATYVPHTAGRYS 60
           MA A +V  E+ Q    +VKLFNRWT+DDV V DISLVDY+GV ++KHAT+VPHTAGRYS
Sbjct: 1   MATAADVDAEIQQALTNEVKLFNRWTYDDVTVTDISLVDYIGVQAAKHATFVPHTAGRYS 60

Query: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPVQVIVDAVV 120
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KH MEIIHLL+DLNP+QVI+DA+V
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIV 120

Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+L+TTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLITTGAREAAFRNIKTIAECLADEL 180

Query: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]
BLAST of Sed0025547 vs. ExPASy Swiss-Prot
Match: Q5E988 (40S ribosomal protein S5 OS=Bos taurus OX=9913 GN=RPS5 PE=2 SV=3)

HSP 1 Score: 307.4 bits (786), Expect = 1.2e-82
Identity = 152/190 (80.00%), Postives = 173/190 (91.05%), Query Frame = 0 

Query: 17  DVKLFNRWTFDDVQVNDISLVDYVGVASSKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 76
           D+KLF +W+ DDVQ+NDISL DY+ V   K+A Y+PH+AGRY+ KRFRKAQCPIVERLTN
Sbjct: 16  DIKLFGKWSTDDVQINDISLQDYIAV-KEKYAKYLPHSAGRYAAKRFRKAQCPIVERLTN 75

Query: 77  SLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPVQVIVDAVVNSGPREDATRIGSAGVV 136
           S+MMHGRNNGKKLM VRI+KH  EIIHLLT  NP+QV+V+A++NSGPRED+TRIG AG V
Sbjct: 76  SMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTV 135

Query: 137 RRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 196
           RRQAVD+SPLRRVNQAI+LL TGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD
Sbjct: 136 RRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 195

Query: 197 EIERVAKANR 207
           E+ERVAK+NR
Sbjct: 196 ELERVAKSNR 204

[Close]
BLAST of Sed0025547 vs. ExPASy Swiss-Prot
Match: P46782 (40S ribosomal protein S5 OS=Homo sapiens OX=9606 GN=RPS5 PE=1 SV=4)

HSP 1 Score: 307.4 bits (786), Expect = 1.2e-82
Identity = 152/190 (80.00%), Postives = 173/190 (91.05%), Query Frame = 0 

Query: 17  DVKLFNRWTFDDVQVNDISLVDYVGVASSKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 76
           D+KLF +W+ DDVQ+NDISL DY+ V   K+A Y+PH+AGRY+ KRFRKAQCPIVERLTN
Sbjct: 16  DIKLFGKWSTDDVQINDISLQDYIAV-KEKYAKYLPHSAGRYAAKRFRKAQCPIVERLTN 75

Query: 77  SLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPVQVIVDAVVNSGPREDATRIGSAGVV 136
           S+MMHGRNNGKKLM VRI+KH  EIIHLLT  NP+QV+V+A++NSGPRED+TRIG AG V
Sbjct: 76  SMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTV 135

Query: 137 RRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 196
           RRQAVD+SPLRRVNQAI+LL TGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD
Sbjct: 136 RRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 195

Query: 197 EIERVAKANR 207
           E+ERVAK+NR
Sbjct: 196 ELERVAKSNR 204

[Close]
BLAST of Sed0025547 vs. ExPASy TrEMBL
Match: A0A6J1DB82 (40S ribosomal protein S5-like OS=Momordica charantia OX=3673 GN=LOC111019394 PE=3 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 2.7e-104
Identity = 198/206 (96.12%), Postives = 203/206 (98.54%), Query Frame = 0 

Query: 1   MAEAIEVVQELTQPHLDVKLFNRWTFDDVQVNDISLVDYVGVASSKHATYVPHTAGRYSV 60
           MA+A+EVVQELTQPH DVK+FNRWTFDDVQVNDISLVDYVGVA +KHATYVPHTAGRYSV
Sbjct: 1   MADAVEVVQELTQPHHDVKIFNRWTFDDVQVNDISLVDYVGVAPAKHATYVPHTAGRYSV 60

Query: 61  KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPVQVIVDAVVN 120
           KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKH MEIIHLLTDLNP+QVIVDAVVN
Sbjct: 61  KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVN 120

Query: 121 SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELI 180
           SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELI
Sbjct: 121 SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELI 180

Query: 181 NAAKGSSNSYAIKKKDEIERVAKANR 207
           NAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 NAAKGSSNSYAIKKKDEIERVAKANR 206

[Close]
BLAST of Sed0025547 vs. ExPASy TrEMBL
Match: A0A6J1KYG3 (40S ribosomal protein S5-like OS=Cucurbita maxima OX=3661 GN=LOC111498288 PE=3 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 1.7e-103
Identity = 197/206 (95.63%), Postives = 202/206 (98.06%), Query Frame = 0 

Query: 1   MAEAIEVVQELTQPHLDVKLFNRWTFDDVQVNDISLVDYVGVASSKHATYVPHTAGRYSV 60
           MAEA+EVVQEL QPH DVKLFNRWTFDDVQVND+SL DY+GVA SKHATYVPHTAGRYS+
Sbjct: 1   MAEAVEVVQELIQPHHDVKLFNRWTFDDVQVNDMSLGDYIGVAPSKHATYVPHTAGRYSM 60

Query: 61  KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPVQVIVDAVVN 120
           KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNP+QVIVDAVVN
Sbjct: 61  KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPIQVIVDAVVN 120

Query: 121 SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELI 180
           SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELI
Sbjct: 121 SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELI 180

Query: 181 NAAKGSSNSYAIKKKDEIERVAKANR 207
           NAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 NAAKGSSNSYAIKKKDEIERVAKANR 206

[Close]
BLAST of Sed0025547 vs. ExPASy TrEMBL
Match: A0A6J1FNF6 (40S ribosomal protein S5-like OS=Cucurbita moschata OX=3662 GN=LOC111447023 PE=3 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 1.7e-103
Identity = 197/206 (95.63%), Postives = 202/206 (98.06%), Query Frame = 0 

Query: 1   MAEAIEVVQELTQPHLDVKLFNRWTFDDVQVNDISLVDYVGVASSKHATYVPHTAGRYSV 60
           MAEA+EVVQEL QPH DVKLFNRWTFDDVQVND+SL DY+GVA SKHATYVPHTAGRYS+
Sbjct: 1   MAEAVEVVQELIQPHHDVKLFNRWTFDDVQVNDMSLGDYIGVAPSKHATYVPHTAGRYSM 60

Query: 61  KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPVQVIVDAVVN 120
           KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNP+QVIVDAVVN
Sbjct: 61  KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPIQVIVDAVVN 120

Query: 121 SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELI 180
           SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELI
Sbjct: 121 SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELI 180

Query: 181 NAAKGSSNSYAIKKKDEIERVAKANR 207
           NAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 NAAKGSSNSYAIKKKDEIERVAKANR 206

[Close]
BLAST of Sed0025547 vs. ExPASy TrEMBL
Match: A0A5D3D3Q1 (40S ribosomal protein S5-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00570 PE=3 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 9.5e-102
Identity = 197/207 (95.17%), Postives = 201/207 (97.10%), Query Frame = 0 

Query: 1   MAEAIEVV-QELTQPHLDVKLFNRWTFDDVQVNDISLVDYVGVASSKHATYVPHTAGRYS 60
           MA  I+VV QELTQPH DVKLFNRWTFDDVQVNDISLVDY+GVA +KHATYVPHTAGRYS
Sbjct: 1   MAVEIDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 60

Query: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPVQVIVDAVV 120
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKH MEIIHLLTDLNP+QVIVDAVV
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120

Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180

Query: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]
BLAST of Sed0025547 vs. ExPASy TrEMBL
Match: A0A6J1DUK1 (40S ribosomal protein S5-like OS=Momordica charantia OX=3673 GN=LOC111024592 PE=3 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 9.5e-102
Identity = 195/206 (94.66%), Postives = 198/206 (96.12%), Query Frame = 0 

Query: 1   MAEAIEVVQELTQPHLDVKLFNRWTFDDVQVNDISLVDYVGVASSKHATYVPHTAGRYSV 60
           M   +E  QELTQPH DVKLFNRWTFDDVQVNDISLVDYVGVA +KHATYVPHTAGRYSV
Sbjct: 1   MEVVVEADQELTQPHHDVKLFNRWTFDDVQVNDISLVDYVGVAPAKHATYVPHTAGRYSV 60

Query: 61  KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPVQVIVDAVVN 120
           KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKH MEIIHLLTDLNP+QVIVDAVVN
Sbjct: 61  KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVN 120

Query: 121 SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELI 180
           SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELI
Sbjct: 121 SGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELI 180

Query: 181 NAAKGSSNSYAIKKKDEIERVAKANR 207
           NAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 NAAKGSSNSYAIKKKDEIERVAKANR 206

[Close]
BLAST of Sed0025547 vs. TAIR 10
Match: AT2G37270.1 (ribosomal protein 5B )

HSP 1 Score: 351.7 bits (901), Expect = 4.1e-97
Identity = 179/201 (89.05%), Postives = 191/201 (95.02%), Query Frame = 0 

Query: 6   EVVQELTQPHLDVKLFNRWTFDDVQVNDISLVDYVGVASSKHATYVPHTAGRYSVKRFRK 65
           E+ Q+LT    +VKLFNRW+FDDV V DISLVDY+GV  SKHAT+VPHTAGRYSVKRFRK
Sbjct: 10  EIQQQLTN---EVKLFNRWSFDDVSVTDISLVDYIGVQPSKHATFVPHTAGRYSVKRFRK 69

Query: 66  AQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPVQVIVDAVVNSGPRE 125
           AQCPIVERLTNSLMMHGRNNGKKLMAVRI+KH MEIIHLL+DLNP+QVI+DA+VNSGPRE
Sbjct: 70  AQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIVNSGPRE 129

Query: 126 DATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKG 185
           DATRIGSAGVVRRQAVDISPLRRVNQAI+LLTTGAREAAFRNIKTIAECLADELINAAKG
Sbjct: 130 DATRIGSAGVVRRQAVDISPLRRVNQAIFLLTTGAREAAFRNIKTIAECLADELINAAKG 189

Query: 186 SSNSYAIKKKDEIERVAKANR 207
           SSNSYAIKKKDEIERVAKANR
Sbjct: 190 SSNSYAIKKKDEIERVAKANR 207

[Close]
BLAST of Sed0025547 vs. TAIR 10
Match: AT2G37270.2 (ribosomal protein 5B )

HSP 1 Score: 351.7 bits (901), Expect = 4.1e-97
Identity = 179/201 (89.05%), Postives = 191/201 (95.02%), Query Frame = 0 

Query: 6   EVVQELTQPHLDVKLFNRWTFDDVQVNDISLVDYVGVASSKHATYVPHTAGRYSVKRFRK 65
           E+ Q+LT    +VKLFNRW+FDDV V DISLVDY+GV  SKHAT+VPHTAGRYSVKRFRK
Sbjct: 10  EIQQQLTN---EVKLFNRWSFDDVSVTDISLVDYIGVQPSKHATFVPHTAGRYSVKRFRK 69

Query: 66  AQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPVQVIVDAVVNSGPRE 125
           AQCPIVERLTNSLMMHGRNNGKKLMAVRI+KH MEIIHLL+DLNP+QVI+DA+VNSGPRE
Sbjct: 70  AQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIVNSGPRE 129

Query: 126 DATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKG 185
           DATRIGSAGVVRRQAVDISPLRRVNQAI+LLTTGAREAAFRNIKTIAECLADELINAAKG
Sbjct: 130 DATRIGSAGVVRRQAVDISPLRRVNQAIFLLTTGAREAAFRNIKTIAECLADELINAAKG 189

Query: 186 SSNSYAIKKKDEIERVAKANR 207
           SSNSYAIKKKDEIERVAKANR
Sbjct: 190 SSNSYAIKKKDEIERVAKANR 207

[Close]
BLAST of Sed0025547 vs. TAIR 10
Match: AT3G11940.1 (ribosomal protein 5A )

HSP 1 Score: 350.1 bits (897), Expect = 1.2e-96
Identity = 179/207 (86.47%), Postives = 194/207 (93.72%), Query Frame = 0 

Query: 1   MAEAIEVVQELTQPHL-DVKLFNRWTFDDVQVNDISLVDYVGVASSKHATYVPHTAGRYS 60
           MA A +V  E+ Q    +VKLFNRWT+DDV V DISLVDY+GV ++KHAT+VPHTAGRYS
Sbjct: 1   MATAADVDAEIQQALTNEVKLFNRWTYDDVTVTDISLVDYIGVQAAKHATFVPHTAGRYS 60

Query: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPVQVIVDAVV 120
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KH MEIIHLL+DLNP+QVI+DA+V
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIV 120

Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+L+TTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLITTGAREAAFRNIKTIAECLADEL 180

Query: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]
BLAST of Sed0025547 vs. TAIR 10
Match: AT3G11940.2 (ribosomal protein 5A )

HSP 1 Score: 350.1 bits (897), Expect = 1.2e-96
Identity = 179/207 (86.47%), Postives = 194/207 (93.72%), Query Frame = 0 

Query: 1   MAEAIEVVQELTQPHL-DVKLFNRWTFDDVQVNDISLVDYVGVASSKHATYVPHTAGRYS 60
           MA A +V  E+ Q    +VKLFNRWT+DDV V DISLVDY+GV ++KHAT+VPHTAGRYS
Sbjct: 1   MATAADVDAEIQQALTNEVKLFNRWTYDDVTVTDISLVDYIGVQAAKHATFVPHTAGRYS 60

Query: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPVQVIVDAVV 120
           VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KH MEIIHLL+DLNP+QVI+DA+V
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIV 120

Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+L+TTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLITTGAREAAFRNIKTIAECLADEL 180

Query: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]
BLAST of Sed0025547 vs. TAIR 10
Match: ATCG01240.1 (ribosomal protein S7 )

HSP 1 Score: 53.9 bits (128), Expect = 1.8e-07
Identity = 47/136 (34.56%), Postives = 73/136 (53.68%), Query Frame = 0 

Query: 73  RLTNSLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPVQVIVDAVVNSGP--REDATRI 132
           RL N L+     +GKK +A +II   ++ I   T+ NP+ V+  A+    P     A R+
Sbjct: 21  RLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRV 80

Query: 133 GSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSY 192
           G  G   +  ++I   +    AI  L   +R+   RN   +A  L+ EL++AAKGS +  
Sbjct: 81  G--GSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRN---MAFKLSSELVDAAKGSGD-- 140

Query: 193 AIKKKDEIERVAKANR 207
           AI+KK+E  R+A+ANR
Sbjct: 141 AIRKKEETHRMAEANR 149

The following BLAST results are available for this feature:
BLAST of Sed0025547 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022151463.15.5e-10496.1240S ribosomal protein S5-like [Momordica charantia] >XP_022151465.1 40S ribosoma... [more]
KAG6596653.13.6e-10395.6340S ribosomal protein S5-1, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022941782.13.6e-10395.6340S ribosomal protein S5-like [Cucurbita moschata] >XP_023005184.1 40S ribosomal... [more]
XP_022157995.12.0e-10194.6640S ribosomal protein S5-like [Momordica charantia][more]
XP_008447165.12.0e-10195.17PREDICTED: 40S ribosomal protein S5-like isoform X2 [Cucumis melo] >KAA0040833.1... [more]
BLAST of Sed0025547 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O657314.4e-9692.6740S ribosomal protein S5 (Fragment) OS=Cicer arietinum OX=3827 GN=RPS5 PE=2 SV=1[more]
Q9ZUT95.7e-9689.0540S ribosomal protein S5-1 OS=Arabidopsis thaliana OX=3702 GN=RPS5A PE=1 SV=1[more]
P514271.7e-9586.4740S ribosomal protein S5-2 OS=Arabidopsis thaliana OX=3702 GN=RPS5B PE=1 SV=2[more]
Q5E9881.2e-8280.0040S ribosomal protein S5 OS=Bos taurus OX=9913 GN=RPS5 PE=2 SV=3[more]
P467821.2e-8280.0040S ribosomal protein S5 OS=Homo sapiens OX=9606 GN=RPS5 PE=1 SV=4[more]
BLAST of Sed0025547 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DB822.7e-10496.1240S ribosomal protein S5-like OS=Momordica charantia OX=3673 GN=LOC111019394 PE=... [more]
A0A6J1KYG31.7e-10395.6340S ribosomal protein S5-like OS=Cucurbita maxima OX=3661 GN=LOC111498288 PE=3 S... [more]
A0A6J1FNF61.7e-10395.6340S ribosomal protein S5-like OS=Cucurbita moschata OX=3662 GN=LOC111447023 PE=3... [more]
A0A5D3D3Q19.5e-10295.1740S ribosomal protein S5-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A6J1DUK19.5e-10294.6640S ribosomal protein S5-like OS=Momordica charantia OX=3673 GN=LOC111024592 PE=... [more]
BLAST of Sed0025547 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G37270.14.1e-9789.05ribosomal protein 5B [more]
AT2G37270.24.1e-9789.05ribosomal protein 5B [more]
AT3G11940.11.2e-9686.47ribosomal protein 5A [more]
AT3G11940.21.2e-9686.47ribosomal protein 5A [more]
ATCG01240.11.8e-0734.56ribosomal protein S7 [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023798Ribosomal protein S7 domainPFAMPF00177Ribosomal_S7coord: 60..206
e-value: 2.7E-36
score: 124.5
IPR000235Ribosomal protein S5/S7PIRSFPIRSF002122RPS7p_RPS7a_RPS5e_RPS7ocoord: 1..206
e-value: 3.7E-39
score: 132.7
IPR000235Ribosomal protein S5/S7PANTHERPTHR11205RIBOSOMAL PROTEIN S7coord: 4..206
IPR036823Ribosomal protein S7 domain superfamilyGENE3D1.10.455.10Ribosomal protein S7 domaincoord: 2..206
e-value: 8.8E-95
score: 318.0
IPR036823Ribosomal protein S7 domain superfamilySUPERFAMILY47973Ribosomal protein S7coord: 19..206
IPR005716Ribosomal protein S5/S7, eukaryotic/archaealTIGRFAMTIGR01028TIGR01028coord: 18..206
e-value: 3.7E-89
score: 295.3
IPR005716Ribosomal protein S5/S7, eukaryotic/archaealCDDcd14867uS7_Eukaryotecoord: 19..206
e-value: 3.00512E-135
score: 374.583
NoneNo IPR availablePANTHERPTHR11205:SF3640S RIBOSOMAL PROTEIN S5coord: 4..206
IPR020606Ribosomal protein S7, conserved sitePROSITEPS00052RIBOSOMAL_S7coord: 72..98

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0025547.1Sed0025547.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000028 ribosomal small subunit assembly
biological_process GO:0006412 translation
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0015935 small ribosomal subunit
molecular_function GO:0003729 mRNA binding
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003723 RNA binding