Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAACACTCGAATCTTCCCGTCGAAGTTTGAAGTTCGCCGCTACTTTCCCGCCACCGCCACCGCCACCGCCAACGCCGCTGCTGCCAACTTTTTCCGTTCAAGTTAATTATCGTATCTACTTCACCATGAAGATTAGAGACCACTTTCTTATCCCTCTGTGAATCGGAAAGGAGTAGTAGATGGAATCCCAGAAACGAAATCTCAGAGCTCGAAAACCACTCTCCGATTGTACCAACACCGTCCTCTCTTCGCAATCGTCGGCTTCGAATCTCTCCGCCGCCATCAAACCTCGAAAACGTGTAATCAAATCCGCAGTTAAACATTCTGTGAGCAATAAGAAGAAAGGCGAATCAAGTGCTGTGTCTGTATCTACATCCGTTCATTTGCAAGCTCCAAACCCTAGCTCTGATTTTGCTCCTAAGGAACCAAATCCAACTTCCGATTCTCGTCCTACAGAACCTAGTTCCAGTTTGCCTCCTATCGTAGAAGCTTCCACTCCTTTGCGTCGTGCTGATTTGCCATCTACTTCAGGTAATTCTTCTTTCTGGTTTTTGATGGCTGTGTTCTTGTGATTTTGGTGCTTGATTCTTTGGTAGGATTACTGGTACTGTAGGCTTCAGTAACTGTTACTCCCTTTGTCTTTTCCCTAAATTAGGAATTCGGTTTACTTGAAATACTACTTCAGAATTTAAGGAGTACAAGCTATTTTGGGGATTGTTAAGAATTTGAAATTGGTGGAATTTGTTGGTTTTTTTGGATAAGAAACAATTTCATTAATGTATGAAATTACATAGATATGAAGGGATTACAAAAGGGATTTTCAACTTTTATAAGACTAGTATAGCTATAATATGAAATAGCTATAAGAGTTGAGATTTCTGTTTTACAAATAGATGGAGGGATTTGTTGTTTTACTTTTATGTTCTAGTTTGGATTTTTAATTTTTCCATGGCTGGAATTCTGGATAACATGTGAGTTTTTGGATTCAGGAACCGATACTGTTTCTGAACCTCAGTCCTTCTACAGTCGAAGGAACCCTACGAATAAAAGGAAGAGCGTTGAGATAGAATTTACACCGTTTGTTTTCTCTTCTGCATCAAAAATCCAAACTAGGTAAAACCCTTTGCAGTTTTTCTCCCTTTTGAAACTTTATCGATTTGTACTTTTAAATCTCTGATGCGCTTAATGGATTGAATTCATGAACCAGAGGGATTTAGTCATGTGTTCATAATGCATAATGAGATTTTTATTACGTTATCTATGTGTCGAATTGAATTCAATTGACGTTAAGTTTCAAAGGAGCAATTTGTCTGCTCTCTGCAGTAATTATCAACCGGGTCTGTTTCCAAGAGGCGACCTTGTTGTTAGAGGTTTGGATCTCTAAGGTATGCTCCCTGAGAAGTCTTAGGTACGGAATCCACGAGTAAGTTTAATTTTAAAATCCGTCGTTGTCTCGTAGCTCAGGGTCTTTTGACCCGCACAGATGCCTCGTGTTTGGAATGGGGTGAAGTTCCGATTCTTGATTATCAAAAGACAAAATATATGGCCTGCTTCTCTGGCATAGGGACGGCGTGATTACCTTGTTTCAAAACAATATATGGCCTGCTTCTAGGGAAAAAACTAAACAGTTATCTTTATCTATCCTGGTGTATGTGCTGCTTTTAGTTATGTAGCAAAATCTGACTATATAAACAATTAGTATTCCGGTTAGTCTGCCAACTTTATCTACGTTGAAGAAAAATTGCACTACCTAAATCAGGATTTTTCAACTCGTTTTCCATTTTATTTTGGCAGTATGTTGATTGAGCCTCAATTGTTTGACTGGTTTAGGATTGAAAGCTTAAGACTGTCGAGGCCTTCATCTTTGTATTTGAATGATTGTTTGGCTTCTTTACTGCGACCAATTTTGTTGTTATTTTATAATTAAATGGAGAAGGGTAAATTCAGGATAGTTGGGCACCACTGATAATAATATCAATGCTACAATGTTTCTTTAAAGATATGGATTAATGAGTCAGGAAAGTCTGTCTTCTAAATTCTAATCTCTCATTTACAGTTTATTACTCGTCTGGTTGTAAATCGCTCGCTTGCTTTTATGTAGGGCCGAGGAAAGAAATGAATATTGTAGCACTTTCAAAGCGAGGACTGTTCCTTATAAAAAGGTCCGTCTGAAATTTTTAGCACTGACAATTTTCTTATCGATCAATCTAAACTTGGGCCATATTCTACACGGGTCTTTGCTCATTTAGGCTTGAATTTGATGATTTTTATTTGTCAGAAAAAATGTGTTCTGACCTTTCTCTAAGAAATGTGATGTTACCTTGTGCTTGTCTAGAGTCTAGACCACAATTAATGAGCTCTGTTCCTGATTAATTAGTTTTTATGAATGGTACTCATTGTCTTGGTTTATGCAATCTTTTACCAACTTTTGTTTATATCTTCTACGGGATTAATATTGATCAGAGATTGACTTTTGTGTCTTCTTGAAGAATAGTAAATACTTAGAATGAAACGGCGGACAATGCACCTCAATTTTGGTCGTCTAAGGTTCACTAATTTGATGACATAACAAATTATCATAATATGGTAGTTGACTAATTGTGCTGTCAGTCCCCAAGGGGTGAGGCTTGTGGTTTCCATGATTTTTTGGATGTCTCATTCTAAACCTACCCGTGTACTTTATTGTAAAATCTCCTGTTCTCTACTGGGTCCAGGCCTATGGATGGACGGATGCCGATACCCCCTTGTATGTAATGGGGTGAAGCTAGATTCTTGATTATCCTAAAAAAGAGTCACTTTTATTTCCCATTTATCATTTGGTAGCAAACATTTGCTGAAAATCATAAATCATAGTTTTTTACTTTTTTCTTTTTGGCAGAGGCAATGTACCACAAAATATGGGGAAGATGCAAAGATTGAGCTTCCACGGGAATTTGTTGAGCAGCAAAAGGCATATTTTTCAGAAGTAGATGCATTTGAACTGCTAGTGGAGGAGGCTAAATCATCCGACTCGGAGTAGACGATACGATGATACGATTCTGTATAGTTTTTTTTTTTTTTTTTGTGAGGCATAGGC
mRNA sequence
TAACACTCGAATCTTCCCGTCGAAGTTTGAAGTTCGCCGCTACTTTCCCGCCACCGCCACCGCCACCGCCAACGCCGCTGCTGCCAACTTTTTCCGTTCAAGTTAATTATCGTATCTACTTCACCATGAAGATTAGAGACCACTTTCTTATCCCTCTGTGAATCGGAAAGGAGTAGTAGATGGAATCCCAGAAACGAAATCTCAGAGCTCGAAAACCACTCTCCGATTGTACCAACACCGTCCTCTCTTCGCAATCGTCGGCTTCGAATCTCTCCGCCGCCATCAAACCTCGAAAACGTGTAATCAAATCCGCAGTTAAACATTCTGTGAGCAATAAGAAGAAAGGCGAATCAAGTGCTGTGTCTGTATCTACATCCGTTCATTTGCAAGCTCCAAACCCTAGCTCTGATTTTGCTCCTAAGGAACCAAATCCAACTTCCGATTCTCGTCCTACAGAACCTAGTTCCAGTTTGCCTCCTATCGTAGAAGCTTCCACTCCTTTGCGTCGTGCTGATTTGCCATCTACTTCAGGAACCGATACTGTTTCTGAACCTCAGTCCTTCTACAGTCGAAGGAACCCTACGAATAAAAGGAAGAGCGTTGAGATAGAATTTACACCGTTTGTTTTCTCTTCTGCATCAAAAATCCAAACTAGGGCCGAGGAAAGAAATGAATATTGTAGCACTTTCAAAGCGAGGACTGTTCCTTATAAAAAGAGGCAATGTACCACAAAATATGGGGAAGATGCAAAGATTGAGCTTCCACGGGAATTTGTTGAGCAGCAAAAGGCATATTTTTCAGAAGTAGATGCATTTGAACTGCTAGTGGAGGAGGCTAAATCATCCGACTCGGAGTAGACGATACGATGATACGATTCTGTATAGTTTTTTTTTTTTTTTTTGTGAGGCATAGGC
Coding sequence (CDS)
ATGGAATCCCAGAAACGAAATCTCAGAGCTCGAAAACCACTCTCCGATTGTACCAACACCGTCCTCTCTTCGCAATCGTCGGCTTCGAATCTCTCCGCCGCCATCAAACCTCGAAAACGTGTAATCAAATCCGCAGTTAAACATTCTGTGAGCAATAAGAAGAAAGGCGAATCAAGTGCTGTGTCTGTATCTACATCCGTTCATTTGCAAGCTCCAAACCCTAGCTCTGATTTTGCTCCTAAGGAACCAAATCCAACTTCCGATTCTCGTCCTACAGAACCTAGTTCCAGTTTGCCTCCTATCGTAGAAGCTTCCACTCCTTTGCGTCGTGCTGATTTGCCATCTACTTCAGGAACCGATACTGTTTCTGAACCTCAGTCCTTCTACAGTCGAAGGAACCCTACGAATAAAAGGAAGAGCGTTGAGATAGAATTTACACCGTTTGTTTTCTCTTCTGCATCAAAAATCCAAACTAGGGCCGAGGAAAGAAATGAATATTGTAGCACTTTCAAAGCGAGGACTGTTCCTTATAAAAAGAGGCAATGTACCACAAAATATGGGGAAGATGCAAAGATTGAGCTTCCACGGGAATTTGTTGAGCAGCAAAAGGCATATTTTTCAGAAGTAGATGCATTTGAACTGCTAGTGGAGGAGGCTAAATCATCCGACTCGGAGTAG
Protein sequence
MESQKRNLRARKPLSDCTNTVLSSQSSASNLSAAIKPRKRVIKSAVKHSVSNKKKGESSAVSVSTSVHLQAPNPSSDFAPKEPNPTSDSRPTEPSSSLPPIVEASTPLRRADLPSTSGTDTVSEPQSFYSRRNPTNKRKSVEIEFTPFVFSSASKIQTRAEERNEYCSTFKARTVPYKKRQCTTKYGEDAKIELPREFVEQQKAYFSEVDAFELLVEEAKSSDSE
Homology
BLAST of Sed0025520 vs. NCBI nr
Match:
XP_022134150.1 (uncharacterized protein LOC111006488 isoform X3 [Momordica charantia])
HSP 1 Score: 283.5 bits (724), Expect = 1.6e-72
Identity = 172/260 (66.15%), Postives = 193/260 (74.23%), Query Frame = 0
Query: 1 MESQKRNLRARKPLSDCTNTVLSSQSSASNLSAAIKPRKRVIKSAVKHSVSNKKKGESSA 60
ME+ KRNLRARKPLSDCTNTVLSSQSSASN S+ IKPR+RVIKSAVK +V+N+KKGESS
Sbjct: 1 MEAPKRNLRARKPLSDCTNTVLSSQSSASNFSSVIKPRRRVIKSAVKDAVNNEKKGESSF 60
Query: 61 VSVSTSVHLQAPNPSSDFAPKEPNPTSDSRPTEP-------------------------- 120
S S S++LQA NPSSD P EPNP+SD PTEP
Sbjct: 61 TSASASLNLQASNPSSDCLPTEPNPSSDCLPTEPNSSSDCLPTEPNASSDCLPTEPNASS 120
Query: 121 --------SSSLPPIVEASTPLRRADLPSTSGTDTVSEPQSFYSRRNPTNKRKSVEIEFT 180
SSSLP EASTP RRADLPS+SGTD VSEPQSFYSRR+PTNKRKS EI FT
Sbjct: 121 DCLPTEPSSSSLP--AEASTPTRRADLPSSSGTDRVSEPQSFYSRRHPTNKRKSTEIAFT 180
Query: 181 PFVFSSASKIQTRAEERNEYCSTFKARTVPYKKRQCTTKYGED-AKIELPREFVEQQKAY 226
PF+F++ASKI T E+R+ Y S KARTVP KKRQ T YG+D +KIELPREFVE+QKAY
Sbjct: 181 PFIFATASKIHTMGEKRDGYSSPSKARTVPCKKRQRGTIYGKDESKIELPREFVEKQKAY 240
BLAST of Sed0025520 vs. NCBI nr
Match:
XP_022991070.1 (uncharacterized protein LOC111487776 isoform X1 [Cucurbita maxima])
HSP 1 Score: 279.6 bits (714), Expect = 2.3e-71
Identity = 169/235 (71.91%), Postives = 186/235 (79.15%), Query Frame = 0
Query: 1 MESQKRNLRARKPLSDCTNTVLSSQSSASNLSAAIKPRKRVIKSAVKHSVSNKKKGESSA 60
MESQKRNLR RKPL+DCTNTVLSSQSSASNLSAAIKPRKRV+K AVK V+N+K+G SS
Sbjct: 1 MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKPAVKDVVNNEKEGVSSF 60
Query: 61 VSVSTSVHLQAPNPSSDFAPKEPN---------PTSDSRPTEPSSSLPPIVEASTPLRRA 120
S STSV+LQA NPSSDF P +P+ PTSDS PTEPSSS P E STP R
Sbjct: 61 ASASTSVNLQASNPSSDFLPTQPSSNLPPAESTPTSDSLPTEPSSSSLP-AEVSTPSRLV 120
Query: 121 DLPSTSGTDTVSEPQSFYSRRNPTNKRKSVEIEFTPFVFSSASKIQTRAEERNEYCSTFK 180
DLPS+SGTD V EPQSFYSRR+P N+RKS E PFVFS+ASKI TR E+R S +
Sbjct: 121 DLPSSSGTDRVPEPQSFYSRRHPANRRKSTETAAAPFVFSTASKILTRGEKRAADSSPSR 180
Query: 181 ARTVPYKKRQCTTKYGED-AKIELPREFVEQQKAYFSEVDAFELLVEEAKSSDSE 226
ARTVPY+KRQ T YGED +KIELPREFVE+QKAYFSEVDAFELLVEEAKSSDSE
Sbjct: 181 ARTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE 234
BLAST of Sed0025520 vs. NCBI nr
Match:
XP_022952551.1 (uncharacterized protein LOC111455207 isoform X1 [Cucurbita moschata] >KAG6602594.1 hypothetical protein SDJN03_07827, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033272.1 hypothetical protein SDJN02_07326 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 278.9 bits (712), Expect = 3.9e-71
Identity = 167/235 (71.06%), Postives = 187/235 (79.57%), Query Frame = 0
Query: 1 MESQKRNLRARKPLSDCTNTVLSSQSSASNLSAAIKPRKRVIKSAVKHSVSNKKKGESSA 60
MESQKRNLR RKPL+DCTNTVLSSQSSASNLSAAIKPRKRV+KSAVK V+N+K+G SS
Sbjct: 1 MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKSAVKDVVNNEKEGVSSL 60
Query: 61 VSVSTSVHLQAPNPSSDFAPKEP---------NPTSDSRPTEPSSSLPPIVEASTPLRRA 120
S STSV+LQA NPSS+F P +P NP+SDS PTEPSSS P E STP R
Sbjct: 61 ASASTSVNLQASNPSSEFLPTQPSSNLPPAESNPSSDSLPTEPSSSSVP-AEVSTPSRFV 120
Query: 121 DLPSTSGTDTVSEPQSFYSRRNPTNKRKSVEIEFTPFVFSSASKIQTRAEERNEYCSTFK 180
DLPS+SGTD V EPQSFYSRR+P N+RKS E PF+FS+ASKI +R E+R S +
Sbjct: 121 DLPSSSGTDRVPEPQSFYSRRHPANRRKSTETAAAPFIFSTASKILSRGEKRAADSSPSR 180
Query: 181 ARTVPYKKRQCTTKYGED-AKIELPREFVEQQKAYFSEVDAFELLVEEAKSSDSE 226
ARTVPY+KRQ T YGED +KIELPREFVE+QKAYFSEVDAFELLVEEAKSSDSE
Sbjct: 181 ARTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE 234
BLAST of Sed0025520 vs. NCBI nr
Match:
XP_023515045.1 (uncharacterized protein LOC111779162 isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 277.3 bits (708), Expect = 1.1e-70
Identity = 166/235 (70.64%), Postives = 186/235 (79.15%), Query Frame = 0
Query: 1 MESQKRNLRARKPLSDCTNTVLSSQSSASNLSAAIKPRKRVIKSAVKHSVSNKKKGESSA 60
MESQKRNLR RKPL+DCTNTVLSSQSSASNLSAAIKPRKRV+KSAVK ++N+K+G SS
Sbjct: 1 MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKSAVKDVLNNEKEGVSSF 60
Query: 61 VSVSTSVHLQAPNPSSDFAPKEP---------NPTSDSRPTEPSSSLPPIVEASTPLRRA 120
S STSV+LQA NPSS+F P +P NP+SDS PTEPSSS P E STP R
Sbjct: 61 ASASTSVNLQASNPSSEFLPTQPSSNLPPAESNPSSDSLPTEPSSSSVP-AEVSTPSRLV 120
Query: 121 DLPSTSGTDTVSEPQSFYSRRNPTNKRKSVEIEFTPFVFSSASKIQTRAEERNEYCSTFK 180
DLPS+SGTD V EPQSFYSRR+P N+RKS E PF+FS+ASKI TR E+R S +
Sbjct: 121 DLPSSSGTDRVPEPQSFYSRRHPANRRKSTETAAAPFIFSTASKILTRGEKRAADSSPSR 180
Query: 181 ARTVPYKKRQCTTKYGED-AKIELPREFVEQQKAYFSEVDAFELLVEEAKSSDSE 226
ARTVPY+KRQ YGED +KIELPREFVE+QKAYFSEVDAFELLVEEAKSSDSE
Sbjct: 181 ARTVPYRKRQRGAIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE 234
BLAST of Sed0025520 vs. NCBI nr
Match:
XP_038884349.1 (uncharacterized protein LOC120075210 isoform X3 [Benincasa hispida])
HSP 1 Score: 275.0 bits (702), Expect = 5.7e-70
Identity = 166/235 (70.64%), Postives = 186/235 (79.15%), Query Frame = 0
Query: 1 MESQKRNLRARKPLSDCTNTVLSSQSSASNLSAAIKPRKRVIKSAVKHSVSNKKKGESSA 60
MESQKR LRARKPL+DCTNT+LSSQSSASN SA+IKPRKRVIKSAVK V+N+KK +
Sbjct: 1 MESQKRILRARKPLADCTNTILSSQSSASNFSASIKPRKRVIKSAVKDVVNNEKKSQPVL 60
Query: 61 VSVSTSVHLQAPNPS---------SDFAPKEPNPTSDSRPTEPSSSLPPIVEASTPLRRA 120
S STSV+L+A NPS SDF+P EPNP++DS P+EPSSS P E STP RRA
Sbjct: 61 ASESTSVNLRASNPSSDFLPTEPASDFSPVEPNPSADSLPSEPSSSRLP-TEVSTPPRRA 120
Query: 121 DLPSTSGTDTVSEPQSFYSRRNPTNKRKSVEIEFTPFVFSSASKIQTRAEERNEYCSTFK 180
DLPS+SGTD VSEPQSFYSRR PTNKRKSVEI PF+FS++SKI TR +R Y S K
Sbjct: 121 DLPSSSGTDRVSEPQSFYSRRQPTNKRKSVEIAVAPFIFSTSSKILTRGRKREGYDSPSK 180
Query: 181 ARTVPYKKRQCTTKYGED-AKIELPREFVEQQKAYFSEVDAFELLVEEAKSSDSE 226
A+TVP KKRQ T Y +D + IELPREFVEQQKAYFSEVDAFEL VEEAKSSDSE
Sbjct: 181 AKTVPCKKRQRATMYEQDESNIELPREFVEQQKAYFSEVDAFELPVEEAKSSDSE 234
BLAST of Sed0025520 vs. ExPASy TrEMBL
Match:
A0A6J1BXA7 (uncharacterized protein LOC111006488 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111006488 PE=4 SV=1)
HSP 1 Score: 283.5 bits (724), Expect = 7.7e-73
Identity = 172/260 (66.15%), Postives = 193/260 (74.23%), Query Frame = 0
Query: 1 MESQKRNLRARKPLSDCTNTVLSSQSSASNLSAAIKPRKRVIKSAVKHSVSNKKKGESSA 60
ME+ KRNLRARKPLSDCTNTVLSSQSSASN S+ IKPR+RVIKSAVK +V+N+KKGESS
Sbjct: 1 MEAPKRNLRARKPLSDCTNTVLSSQSSASNFSSVIKPRRRVIKSAVKDAVNNEKKGESSF 60
Query: 61 VSVSTSVHLQAPNPSSDFAPKEPNPTSDSRPTEP-------------------------- 120
S S S++LQA NPSSD P EPNP+SD PTEP
Sbjct: 61 TSASASLNLQASNPSSDCLPTEPNPSSDCLPTEPNSSSDCLPTEPNASSDCLPTEPNASS 120
Query: 121 --------SSSLPPIVEASTPLRRADLPSTSGTDTVSEPQSFYSRRNPTNKRKSVEIEFT 180
SSSLP EASTP RRADLPS+SGTD VSEPQSFYSRR+PTNKRKS EI FT
Sbjct: 121 DCLPTEPSSSSLP--AEASTPTRRADLPSSSGTDRVSEPQSFYSRRHPTNKRKSTEIAFT 180
Query: 181 PFVFSSASKIQTRAEERNEYCSTFKARTVPYKKRQCTTKYGED-AKIELPREFVEQQKAY 226
PF+F++ASKI T E+R+ Y S KARTVP KKRQ T YG+D +KIELPREFVE+QKAY
Sbjct: 181 PFIFATASKIHTMGEKRDGYSSPSKARTVPCKKRQRGTIYGKDESKIELPREFVEKQKAY 240
BLAST of Sed0025520 vs. ExPASy TrEMBL
Match:
A0A6J1JRU8 (uncharacterized protein LOC111487776 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487776 PE=4 SV=1)
HSP 1 Score: 279.6 bits (714), Expect = 1.1e-71
Identity = 169/235 (71.91%), Postives = 186/235 (79.15%), Query Frame = 0
Query: 1 MESQKRNLRARKPLSDCTNTVLSSQSSASNLSAAIKPRKRVIKSAVKHSVSNKKKGESSA 60
MESQKRNLR RKPL+DCTNTVLSSQSSASNLSAAIKPRKRV+K AVK V+N+K+G SS
Sbjct: 1 MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKPAVKDVVNNEKEGVSSF 60
Query: 61 VSVSTSVHLQAPNPSSDFAPKEPN---------PTSDSRPTEPSSSLPPIVEASTPLRRA 120
S STSV+LQA NPSSDF P +P+ PTSDS PTEPSSS P E STP R
Sbjct: 61 ASASTSVNLQASNPSSDFLPTQPSSNLPPAESTPTSDSLPTEPSSSSLP-AEVSTPSRLV 120
Query: 121 DLPSTSGTDTVSEPQSFYSRRNPTNKRKSVEIEFTPFVFSSASKIQTRAEERNEYCSTFK 180
DLPS+SGTD V EPQSFYSRR+P N+RKS E PFVFS+ASKI TR E+R S +
Sbjct: 121 DLPSSSGTDRVPEPQSFYSRRHPANRRKSTETAAAPFVFSTASKILTRGEKRAADSSPSR 180
Query: 181 ARTVPYKKRQCTTKYGED-AKIELPREFVEQQKAYFSEVDAFELLVEEAKSSDSE 226
ARTVPY+KRQ T YGED +KIELPREFVE+QKAYFSEVDAFELLVEEAKSSDSE
Sbjct: 181 ARTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE 234
BLAST of Sed0025520 vs. ExPASy TrEMBL
Match:
A0A6J1GKJ2 (uncharacterized protein LOC111455207 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455207 PE=4 SV=1)
HSP 1 Score: 278.9 bits (712), Expect = 1.9e-71
Identity = 167/235 (71.06%), Postives = 187/235 (79.57%), Query Frame = 0
Query: 1 MESQKRNLRARKPLSDCTNTVLSSQSSASNLSAAIKPRKRVIKSAVKHSVSNKKKGESSA 60
MESQKRNLR RKPL+DCTNTVLSSQSSASNLSAAIKPRKRV+KSAVK V+N+K+G SS
Sbjct: 1 MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKSAVKDVVNNEKEGVSSL 60
Query: 61 VSVSTSVHLQAPNPSSDFAPKEP---------NPTSDSRPTEPSSSLPPIVEASTPLRRA 120
S STSV+LQA NPSS+F P +P NP+SDS PTEPSSS P E STP R
Sbjct: 61 ASASTSVNLQASNPSSEFLPTQPSSNLPPAESNPSSDSLPTEPSSSSVP-AEVSTPSRFV 120
Query: 121 DLPSTSGTDTVSEPQSFYSRRNPTNKRKSVEIEFTPFVFSSASKIQTRAEERNEYCSTFK 180
DLPS+SGTD V EPQSFYSRR+P N+RKS E PF+FS+ASKI +R E+R S +
Sbjct: 121 DLPSSSGTDRVPEPQSFYSRRHPANRRKSTETAAAPFIFSTASKILSRGEKRAADSSPSR 180
Query: 181 ARTVPYKKRQCTTKYGED-AKIELPREFVEQQKAYFSEVDAFELLVEEAKSSDSE 226
ARTVPY+KRQ T YGED +KIELPREFVE+QKAYFSEVDAFELLVEEAKSSDSE
Sbjct: 181 ARTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE 234
BLAST of Sed0025520 vs. ExPASy TrEMBL
Match:
A0A6J1C164 (uncharacterized protein LOC111006488 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006488 PE=4 SV=1)
HSP 1 Score: 274.2 bits (700), Expect = 4.7e-70
Identity = 172/273 (63.00%), Postives = 193/273 (70.70%), Query Frame = 0
Query: 1 MESQKRNLRARKPLSDCTNTVLSSQSSASNLSAAIKPRKRVIKSAVKHSVSNKKKGESSA 60
ME+ KRNLRARKPLSDCTNTVLSSQSSASN S+ IKPR+RVIKSAVK +V+N+KKGESS
Sbjct: 1 MEAPKRNLRARKPLSDCTNTVLSSQSSASNFSSVIKPRRRVIKSAVKDAVNNEKKGESSF 60
Query: 61 VSVSTSVHLQAPNPSSDFAPKEPNPTSDSRPTEP-------------------------- 120
S S S++LQA NPSSD P EPNP+SD PTEP
Sbjct: 61 TSASASLNLQASNPSSDCLPTEPNPSSDCLPTEPNSSSDCLPTEPNASSDCLPTEPNASS 120
Query: 121 --------SSSLPPIVEASTPLRRADLPSTSGTDTVSEPQSFYSRRNPTNKRKSVEIEFT 180
SSSLP EASTP RRADLPS+SGTD VSEPQSFYSRR+PTNKRKS EI FT
Sbjct: 121 DCLPTEPSSSSLP--AEASTPTRRADLPSSSGTDRVSEPQSFYSRRHPTNKRKSTEIAFT 180
Query: 181 PFVFSSASKIQTRAEERNEYCSTFKARTVPYKK-------------RQCTTKYGED-AKI 226
PF+F++ASKI T E+R+ Y S KARTVP KK RQ T YG+D +KI
Sbjct: 181 PFIFATASKIHTMGEKRDGYSSPSKARTVPCKKQNMYSDLSPRNVMRQRGTIYGKDESKI 240
BLAST of Sed0025520 vs. ExPASy TrEMBL
Match:
A0A6J1JPQ1 (cell wall protein RBR3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487776 PE=4 SV=1)
HSP 1 Score: 270.4 bits (690), Expect = 6.8e-69
Identity = 167/235 (71.06%), Postives = 184/235 (78.30%), Query Frame = 0
Query: 1 MESQKRNLRARKPLSDCTNTVLSSQSSASNLSAAIKPRKRVIKSAVKHSVSNKKKGESSA 60
MESQKRNLR RKPL+DCTNTVLSSQSSASNLSAAIKPRKRV+K AVK V+N+K+G SS
Sbjct: 1 MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKPAVKDVVNNEKEGVSSF 60
Query: 61 VSVSTSVHLQAPNPSSDFAPKEPN---------PTSDSRPTEPSSSLPPIVEASTPLRRA 120
S STSV+LQA NPSSDF P +P+ PTSDS PTEPSSS P E STP R
Sbjct: 61 ASASTSVNLQASNPSSDFLPTQPSSNLPPAESTPTSDSLPTEPSSSSLP-AEVSTPSRLV 120
Query: 121 DLPSTSGTDTVSEPQSFYSRRNPTNKRKSVEIEFTPFVFSSASKIQTRAEERNEYCSTFK 180
DLPS+S D V EPQSFYSRR+P N+RKS E PFVFS+ASKI TR E+R S +
Sbjct: 121 DLPSSS--DRVPEPQSFYSRRHPANRRKSTETAAAPFVFSTASKILTRGEKRAADSSPSR 180
Query: 181 ARTVPYKKRQCTTKYGED-AKIELPREFVEQQKAYFSEVDAFELLVEEAKSSDSE 226
ARTVPY+KRQ T YGED +KIELPREFVE+QKAYFSEVDAFELLVEEAKSSDSE
Sbjct: 181 ARTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE 232
BLAST of Sed0025520 vs. TAIR 10
Match:
AT3G56250.1 (unknown protein; Has 109 Blast hits to 83 proteins in 41 species: Archae - 0; Bacteria - 6; Metazoa - 18; Fungi - 20; Plants - 21; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). )
HSP 1 Score: 59.3 bits (142), Expect = 4.6e-09
Identity = 77/231 (33.33%), Postives = 110/231 (47.62%), Query Frame = 0
Query: 11 RKPLSDCTNTV-LSSQSSASNLSAAIKPRKRVIKSAVKHSVSNKKKGESSAVSVSTSVHL 70
RKPL+DCTNTV SSQ S+S++ A +K V+ + +K + V+ S +
Sbjct: 13 RKPLADCTNTVSRSSQQSSSSVKFANPSLTSSLKRLVEQTTLKEKPKD---VNTSATAPE 72
Query: 71 QAPNPSSDFAPKEPNPTSDSRPTEPSSSLPPIVEASTPLRRADLPSTSGTD------TVS 130
A P T+D RP S AS P R P TS +D +
Sbjct: 73 IASRPI----------TTDVRPVTRRMSADLASPASAPSR----PQTSRSDMGVSDKDFT 132
Query: 131 EPQSFYS-RRNPTNKRKSVEIEFTPFV-------FSSASKIQTRAEERNEYCSTFKARTV 190
EP S Y+ RR + +++S + + SS+S +TR N+ K V
Sbjct: 133 EPWSVYTVRRKASGQKRSKDASSSTSAAARIRLDLSSSSGKKTRQASENKK----KTLKV 192
Query: 191 PYKKRQCTTKY-GEDAKIELPREFVEQQKAYFSEVDAFELLVEEAKSSDSE 226
KKRQ T K ED ++++E+QKAYF+E+DAFEL VEE +SDS+
Sbjct: 193 APKKRQRTVKQEKEDPVSAACQDYIEKQKAYFAEIDAFELPVEEVSNSDSD 222
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022134150.1 | 1.6e-72 | 66.15 | uncharacterized protein LOC111006488 isoform X3 [Momordica charantia] | [more] |
XP_022991070.1 | 2.3e-71 | 71.91 | uncharacterized protein LOC111487776 isoform X1 [Cucurbita maxima] | [more] |
XP_022952551.1 | 3.9e-71 | 71.06 | uncharacterized protein LOC111455207 isoform X1 [Cucurbita moschata] >KAG6602594... | [more] |
XP_023515045.1 | 1.1e-70 | 70.64 | uncharacterized protein LOC111779162 isoform X1 [Cucurbita pepo subsp. pepo] | [more] |
XP_038884349.1 | 5.7e-70 | 70.64 | uncharacterized protein LOC120075210 isoform X3 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1BXA7 | 7.7e-73 | 66.15 | uncharacterized protein LOC111006488 isoform X3 OS=Momordica charantia OX=3673 G... | [more] |
A0A6J1JRU8 | 1.1e-71 | 71.91 | uncharacterized protein LOC111487776 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
A0A6J1GKJ2 | 1.9e-71 | 71.06 | uncharacterized protein LOC111455207 isoform X1 OS=Cucurbita moschata OX=3662 GN... | [more] |
A0A6J1C164 | 4.7e-70 | 63.00 | uncharacterized protein LOC111006488 isoform X1 OS=Momordica charantia OX=3673 G... | [more] |
A0A6J1JPQ1 | 6.8e-69 | 71.06 | cell wall protein RBR3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1114877... | [more] |
Match Name | E-value | Identity | Description | |
AT3G56250.1 | 4.6e-09 | 33.33 | unknown protein; Has 109 Blast hits to 83 proteins in 41 species: Archae - 0; Ba... | [more] |