Sed0025520 (gene) Chayote v1

Overview
NameSed0025520
Typegene
OrganismSechium edule (Chayote v1)
Descriptioncell wall protein RBR3-like isoform X2
LocationLG11: 35093697 .. 35096772 (+)
RNA-Seq ExpressionSed0025520
SyntenySed0025520
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAACACTCGAATCTTCCCGTCGAAGTTTGAAGTTCGCCGCTACTTTCCCGCCACCGCCACCGCCACCGCCAACGCCGCTGCTGCCAACTTTTTCCGTTCAAGTTAATTATCGTATCTACTTCACCATGAAGATTAGAGACCACTTTCTTATCCCTCTGTGAATCGGAAAGGAGTAGTAGATGGAATCCCAGAAACGAAATCTCAGAGCTCGAAAACCACTCTCCGATTGTACCAACACCGTCCTCTCTTCGCAATCGTCGGCTTCGAATCTCTCCGCCGCCATCAAACCTCGAAAACGTGTAATCAAATCCGCAGTTAAACATTCTGTGAGCAATAAGAAGAAAGGCGAATCAAGTGCTGTGTCTGTATCTACATCCGTTCATTTGCAAGCTCCAAACCCTAGCTCTGATTTTGCTCCTAAGGAACCAAATCCAACTTCCGATTCTCGTCCTACAGAACCTAGTTCCAGTTTGCCTCCTATCGTAGAAGCTTCCACTCCTTTGCGTCGTGCTGATTTGCCATCTACTTCAGGTAATTCTTCTTTCTGGTTTTTGATGGCTGTGTTCTTGTGATTTTGGTGCTTGATTCTTTGGTAGGATTACTGGTACTGTAGGCTTCAGTAACTGTTACTCCCTTTGTCTTTTCCCTAAATTAGGAATTCGGTTTACTTGAAATACTACTTCAGAATTTAAGGAGTACAAGCTATTTTGGGGATTGTTAAGAATTTGAAATTGGTGGAATTTGTTGGTTTTTTTGGATAAGAAACAATTTCATTAATGTATGAAATTACATAGATATGAAGGGATTACAAAAGGGATTTTCAACTTTTATAAGACTAGTATAGCTATAATATGAAATAGCTATAAGAGTTGAGATTTCTGTTTTACAAATAGATGGAGGGATTTGTTGTTTTACTTTTATGTTCTAGTTTGGATTTTTAATTTTTCCATGGCTGGAATTCTGGATAACATGTGAGTTTTTGGATTCAGGAACCGATACTGTTTCTGAACCTCAGTCCTTCTACAGTCGAAGGAACCCTACGAATAAAAGGAAGAGCGTTGAGATAGAATTTACACCGTTTGTTTTCTCTTCTGCATCAAAAATCCAAACTAGGTAAAACCCTTTGCAGTTTTTCTCCCTTTTGAAACTTTATCGATTTGTACTTTTAAATCTCTGATGCGCTTAATGGATTGAATTCATGAACCAGAGGGATTTAGTCATGTGTTCATAATGCATAATGAGATTTTTATTACGTTATCTATGTGTCGAATTGAATTCAATTGACGTTAAGTTTCAAAGGAGCAATTTGTCTGCTCTCTGCAGTAATTATCAACCGGGTCTGTTTCCAAGAGGCGACCTTGTTGTTAGAGGTTTGGATCTCTAAGGTATGCTCCCTGAGAAGTCTTAGGTACGGAATCCACGAGTAAGTTTAATTTTAAAATCCGTCGTTGTCTCGTAGCTCAGGGTCTTTTGACCCGCACAGATGCCTCGTGTTTGGAATGGGGTGAAGTTCCGATTCTTGATTATCAAAAGACAAAATATATGGCCTGCTTCTCTGGCATAGGGACGGCGTGATTACCTTGTTTCAAAACAATATATGGCCTGCTTCTAGGGAAAAAACTAAACAGTTATCTTTATCTATCCTGGTGTATGTGCTGCTTTTAGTTATGTAGCAAAATCTGACTATATAAACAATTAGTATTCCGGTTAGTCTGCCAACTTTATCTACGTTGAAGAAAAATTGCACTACCTAAATCAGGATTTTTCAACTCGTTTTCCATTTTATTTTGGCAGTATGTTGATTGAGCCTCAATTGTTTGACTGGTTTAGGATTGAAAGCTTAAGACTGTCGAGGCCTTCATCTTTGTATTTGAATGATTGTTTGGCTTCTTTACTGCGACCAATTTTGTTGTTATTTTATAATTAAATGGAGAAGGGTAAATTCAGGATAGTTGGGCACCACTGATAATAATATCAATGCTACAATGTTTCTTTAAAGATATGGATTAATGAGTCAGGAAAGTCTGTCTTCTAAATTCTAATCTCTCATTTACAGTTTATTACTCGTCTGGTTGTAAATCGCTCGCTTGCTTTTATGTAGGGCCGAGGAAAGAAATGAATATTGTAGCACTTTCAAAGCGAGGACTGTTCCTTATAAAAAGGTCCGTCTGAAATTTTTAGCACTGACAATTTTCTTATCGATCAATCTAAACTTGGGCCATATTCTACACGGGTCTTTGCTCATTTAGGCTTGAATTTGATGATTTTTATTTGTCAGAAAAAATGTGTTCTGACCTTTCTCTAAGAAATGTGATGTTACCTTGTGCTTGTCTAGAGTCTAGACCACAATTAATGAGCTCTGTTCCTGATTAATTAGTTTTTATGAATGGTACTCATTGTCTTGGTTTATGCAATCTTTTACCAACTTTTGTTTATATCTTCTACGGGATTAATATTGATCAGAGATTGACTTTTGTGTCTTCTTGAAGAATAGTAAATACTTAGAATGAAACGGCGGACAATGCACCTCAATTTTGGTCGTCTAAGGTTCACTAATTTGATGACATAACAAATTATCATAATATGGTAGTTGACTAATTGTGCTGTCAGTCCCCAAGGGGTGAGGCTTGTGGTTTCCATGATTTTTTGGATGTCTCATTCTAAACCTACCCGTGTACTTTATTGTAAAATCTCCTGTTCTCTACTGGGTCCAGGCCTATGGATGGACGGATGCCGATACCCCCTTGTATGTAATGGGGTGAAGCTAGATTCTTGATTATCCTAAAAAAGAGTCACTTTTATTTCCCATTTATCATTTGGTAGCAAACATTTGCTGAAAATCATAAATCATAGTTTTTTACTTTTTTCTTTTTGGCAGAGGCAATGTACCACAAAATATGGGGAAGATGCAAAGATTGAGCTTCCACGGGAATTTGTTGAGCAGCAAAAGGCATATTTTTCAGAAGTAGATGCATTTGAACTGCTAGTGGAGGAGGCTAAATCATCCGACTCGGAGTAGACGATACGATGATACGATTCTGTATAGTTTTTTTTTTTTTTTTTGTGAGGCATAGGC

mRNA sequence

TAACACTCGAATCTTCCCGTCGAAGTTTGAAGTTCGCCGCTACTTTCCCGCCACCGCCACCGCCACCGCCAACGCCGCTGCTGCCAACTTTTTCCGTTCAAGTTAATTATCGTATCTACTTCACCATGAAGATTAGAGACCACTTTCTTATCCCTCTGTGAATCGGAAAGGAGTAGTAGATGGAATCCCAGAAACGAAATCTCAGAGCTCGAAAACCACTCTCCGATTGTACCAACACCGTCCTCTCTTCGCAATCGTCGGCTTCGAATCTCTCCGCCGCCATCAAACCTCGAAAACGTGTAATCAAATCCGCAGTTAAACATTCTGTGAGCAATAAGAAGAAAGGCGAATCAAGTGCTGTGTCTGTATCTACATCCGTTCATTTGCAAGCTCCAAACCCTAGCTCTGATTTTGCTCCTAAGGAACCAAATCCAACTTCCGATTCTCGTCCTACAGAACCTAGTTCCAGTTTGCCTCCTATCGTAGAAGCTTCCACTCCTTTGCGTCGTGCTGATTTGCCATCTACTTCAGGAACCGATACTGTTTCTGAACCTCAGTCCTTCTACAGTCGAAGGAACCCTACGAATAAAAGGAAGAGCGTTGAGATAGAATTTACACCGTTTGTTTTCTCTTCTGCATCAAAAATCCAAACTAGGGCCGAGGAAAGAAATGAATATTGTAGCACTTTCAAAGCGAGGACTGTTCCTTATAAAAAGAGGCAATGTACCACAAAATATGGGGAAGATGCAAAGATTGAGCTTCCACGGGAATTTGTTGAGCAGCAAAAGGCATATTTTTCAGAAGTAGATGCATTTGAACTGCTAGTGGAGGAGGCTAAATCATCCGACTCGGAGTAGACGATACGATGATACGATTCTGTATAGTTTTTTTTTTTTTTTTTGTGAGGCATAGGC

Coding sequence (CDS)

ATGGAATCCCAGAAACGAAATCTCAGAGCTCGAAAACCACTCTCCGATTGTACCAACACCGTCCTCTCTTCGCAATCGTCGGCTTCGAATCTCTCCGCCGCCATCAAACCTCGAAAACGTGTAATCAAATCCGCAGTTAAACATTCTGTGAGCAATAAGAAGAAAGGCGAATCAAGTGCTGTGTCTGTATCTACATCCGTTCATTTGCAAGCTCCAAACCCTAGCTCTGATTTTGCTCCTAAGGAACCAAATCCAACTTCCGATTCTCGTCCTACAGAACCTAGTTCCAGTTTGCCTCCTATCGTAGAAGCTTCCACTCCTTTGCGTCGTGCTGATTTGCCATCTACTTCAGGAACCGATACTGTTTCTGAACCTCAGTCCTTCTACAGTCGAAGGAACCCTACGAATAAAAGGAAGAGCGTTGAGATAGAATTTACACCGTTTGTTTTCTCTTCTGCATCAAAAATCCAAACTAGGGCCGAGGAAAGAAATGAATATTGTAGCACTTTCAAAGCGAGGACTGTTCCTTATAAAAAGAGGCAATGTACCACAAAATATGGGGAAGATGCAAAGATTGAGCTTCCACGGGAATTTGTTGAGCAGCAAAAGGCATATTTTTCAGAAGTAGATGCATTTGAACTGCTAGTGGAGGAGGCTAAATCATCCGACTCGGAGTAG

Protein sequence

MESQKRNLRARKPLSDCTNTVLSSQSSASNLSAAIKPRKRVIKSAVKHSVSNKKKGESSAVSVSTSVHLQAPNPSSDFAPKEPNPTSDSRPTEPSSSLPPIVEASTPLRRADLPSTSGTDTVSEPQSFYSRRNPTNKRKSVEIEFTPFVFSSASKIQTRAEERNEYCSTFKARTVPYKKRQCTTKYGEDAKIELPREFVEQQKAYFSEVDAFELLVEEAKSSDSE
Homology
BLAST of Sed0025520 vs. NCBI nr
Match: XP_022134150.1 (uncharacterized protein LOC111006488 isoform X3 [Momordica charantia])

HSP 1 Score: 283.5 bits (724), Expect = 1.6e-72
Identity = 172/260 (66.15%), Postives = 193/260 (74.23%), Query Frame = 0

Query: 1   MESQKRNLRARKPLSDCTNTVLSSQSSASNLSAAIKPRKRVIKSAVKHSVSNKKKGESSA 60
           ME+ KRNLRARKPLSDCTNTVLSSQSSASN S+ IKPR+RVIKSAVK +V+N+KKGESS 
Sbjct: 1   MEAPKRNLRARKPLSDCTNTVLSSQSSASNFSSVIKPRRRVIKSAVKDAVNNEKKGESSF 60

Query: 61  VSVSTSVHLQAPNPSSDFAPKEPNPTSDSRPTEP-------------------------- 120
            S S S++LQA NPSSD  P EPNP+SD  PTEP                          
Sbjct: 61  TSASASLNLQASNPSSDCLPTEPNPSSDCLPTEPNSSSDCLPTEPNASSDCLPTEPNASS 120

Query: 121 --------SSSLPPIVEASTPLRRADLPSTSGTDTVSEPQSFYSRRNPTNKRKSVEIEFT 180
                   SSSLP   EASTP RRADLPS+SGTD VSEPQSFYSRR+PTNKRKS EI FT
Sbjct: 121 DCLPTEPSSSSLP--AEASTPTRRADLPSSSGTDRVSEPQSFYSRRHPTNKRKSTEIAFT 180

Query: 181 PFVFSSASKIQTRAEERNEYCSTFKARTVPYKKRQCTTKYGED-AKIELPREFVEQQKAY 226
           PF+F++ASKI T  E+R+ Y S  KARTVP KKRQ  T YG+D +KIELPREFVE+QKAY
Sbjct: 181 PFIFATASKIHTMGEKRDGYSSPSKARTVPCKKRQRGTIYGKDESKIELPREFVEKQKAY 240

BLAST of Sed0025520 vs. NCBI nr
Match: XP_022991070.1 (uncharacterized protein LOC111487776 isoform X1 [Cucurbita maxima])

HSP 1 Score: 279.6 bits (714), Expect = 2.3e-71
Identity = 169/235 (71.91%), Postives = 186/235 (79.15%), Query Frame = 0

Query: 1   MESQKRNLRARKPLSDCTNTVLSSQSSASNLSAAIKPRKRVIKSAVKHSVSNKKKGESSA 60
           MESQKRNLR RKPL+DCTNTVLSSQSSASNLSAAIKPRKRV+K AVK  V+N+K+G SS 
Sbjct: 1   MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKPAVKDVVNNEKEGVSSF 60

Query: 61  VSVSTSVHLQAPNPSSDFAPKEPN---------PTSDSRPTEPSSSLPPIVEASTPLRRA 120
            S STSV+LQA NPSSDF P +P+         PTSDS PTEPSSS  P  E STP R  
Sbjct: 61  ASASTSVNLQASNPSSDFLPTQPSSNLPPAESTPTSDSLPTEPSSSSLP-AEVSTPSRLV 120

Query: 121 DLPSTSGTDTVSEPQSFYSRRNPTNKRKSVEIEFTPFVFSSASKIQTRAEERNEYCSTFK 180
           DLPS+SGTD V EPQSFYSRR+P N+RKS E    PFVFS+ASKI TR E+R    S  +
Sbjct: 121 DLPSSSGTDRVPEPQSFYSRRHPANRRKSTETAAAPFVFSTASKILTRGEKRAADSSPSR 180

Query: 181 ARTVPYKKRQCTTKYGED-AKIELPREFVEQQKAYFSEVDAFELLVEEAKSSDSE 226
           ARTVPY+KRQ  T YGED +KIELPREFVE+QKAYFSEVDAFELLVEEAKSSDSE
Sbjct: 181 ARTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE 234

BLAST of Sed0025520 vs. NCBI nr
Match: XP_022952551.1 (uncharacterized protein LOC111455207 isoform X1 [Cucurbita moschata] >KAG6602594.1 hypothetical protein SDJN03_07827, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033272.1 hypothetical protein SDJN02_07326 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 278.9 bits (712), Expect = 3.9e-71
Identity = 167/235 (71.06%), Postives = 187/235 (79.57%), Query Frame = 0

Query: 1   MESQKRNLRARKPLSDCTNTVLSSQSSASNLSAAIKPRKRVIKSAVKHSVSNKKKGESSA 60
           MESQKRNLR RKPL+DCTNTVLSSQSSASNLSAAIKPRKRV+KSAVK  V+N+K+G SS 
Sbjct: 1   MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKSAVKDVVNNEKEGVSSL 60

Query: 61  VSVSTSVHLQAPNPSSDFAPKEP---------NPTSDSRPTEPSSSLPPIVEASTPLRRA 120
            S STSV+LQA NPSS+F P +P         NP+SDS PTEPSSS  P  E STP R  
Sbjct: 61  ASASTSVNLQASNPSSEFLPTQPSSNLPPAESNPSSDSLPTEPSSSSVP-AEVSTPSRFV 120

Query: 121 DLPSTSGTDTVSEPQSFYSRRNPTNKRKSVEIEFTPFVFSSASKIQTRAEERNEYCSTFK 180
           DLPS+SGTD V EPQSFYSRR+P N+RKS E    PF+FS+ASKI +R E+R    S  +
Sbjct: 121 DLPSSSGTDRVPEPQSFYSRRHPANRRKSTETAAAPFIFSTASKILSRGEKRAADSSPSR 180

Query: 181 ARTVPYKKRQCTTKYGED-AKIELPREFVEQQKAYFSEVDAFELLVEEAKSSDSE 226
           ARTVPY+KRQ  T YGED +KIELPREFVE+QKAYFSEVDAFELLVEEAKSSDSE
Sbjct: 181 ARTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE 234

BLAST of Sed0025520 vs. NCBI nr
Match: XP_023515045.1 (uncharacterized protein LOC111779162 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 277.3 bits (708), Expect = 1.1e-70
Identity = 166/235 (70.64%), Postives = 186/235 (79.15%), Query Frame = 0

Query: 1   MESQKRNLRARKPLSDCTNTVLSSQSSASNLSAAIKPRKRVIKSAVKHSVSNKKKGESSA 60
           MESQKRNLR RKPL+DCTNTVLSSQSSASNLSAAIKPRKRV+KSAVK  ++N+K+G SS 
Sbjct: 1   MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKSAVKDVLNNEKEGVSSF 60

Query: 61  VSVSTSVHLQAPNPSSDFAPKEP---------NPTSDSRPTEPSSSLPPIVEASTPLRRA 120
            S STSV+LQA NPSS+F P +P         NP+SDS PTEPSSS  P  E STP R  
Sbjct: 61  ASASTSVNLQASNPSSEFLPTQPSSNLPPAESNPSSDSLPTEPSSSSVP-AEVSTPSRLV 120

Query: 121 DLPSTSGTDTVSEPQSFYSRRNPTNKRKSVEIEFTPFVFSSASKIQTRAEERNEYCSTFK 180
           DLPS+SGTD V EPQSFYSRR+P N+RKS E    PF+FS+ASKI TR E+R    S  +
Sbjct: 121 DLPSSSGTDRVPEPQSFYSRRHPANRRKSTETAAAPFIFSTASKILTRGEKRAADSSPSR 180

Query: 181 ARTVPYKKRQCTTKYGED-AKIELPREFVEQQKAYFSEVDAFELLVEEAKSSDSE 226
           ARTVPY+KRQ    YGED +KIELPREFVE+QKAYFSEVDAFELLVEEAKSSDSE
Sbjct: 181 ARTVPYRKRQRGAIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE 234

BLAST of Sed0025520 vs. NCBI nr
Match: XP_038884349.1 (uncharacterized protein LOC120075210 isoform X3 [Benincasa hispida])

HSP 1 Score: 275.0 bits (702), Expect = 5.7e-70
Identity = 166/235 (70.64%), Postives = 186/235 (79.15%), Query Frame = 0

Query: 1   MESQKRNLRARKPLSDCTNTVLSSQSSASNLSAAIKPRKRVIKSAVKHSVSNKKKGESSA 60
           MESQKR LRARKPL+DCTNT+LSSQSSASN SA+IKPRKRVIKSAVK  V+N+KK +   
Sbjct: 1   MESQKRILRARKPLADCTNTILSSQSSASNFSASIKPRKRVIKSAVKDVVNNEKKSQPVL 60

Query: 61  VSVSTSVHLQAPNPS---------SDFAPKEPNPTSDSRPTEPSSSLPPIVEASTPLRRA 120
            S STSV+L+A NPS         SDF+P EPNP++DS P+EPSSS  P  E STP RRA
Sbjct: 61  ASESTSVNLRASNPSSDFLPTEPASDFSPVEPNPSADSLPSEPSSSRLP-TEVSTPPRRA 120

Query: 121 DLPSTSGTDTVSEPQSFYSRRNPTNKRKSVEIEFTPFVFSSASKIQTRAEERNEYCSTFK 180
           DLPS+SGTD VSEPQSFYSRR PTNKRKSVEI   PF+FS++SKI TR  +R  Y S  K
Sbjct: 121 DLPSSSGTDRVSEPQSFYSRRQPTNKRKSVEIAVAPFIFSTSSKILTRGRKREGYDSPSK 180

Query: 181 ARTVPYKKRQCTTKYGED-AKIELPREFVEQQKAYFSEVDAFELLVEEAKSSDSE 226
           A+TVP KKRQ  T Y +D + IELPREFVEQQKAYFSEVDAFEL VEEAKSSDSE
Sbjct: 181 AKTVPCKKRQRATMYEQDESNIELPREFVEQQKAYFSEVDAFELPVEEAKSSDSE 234

BLAST of Sed0025520 vs. ExPASy TrEMBL
Match: A0A6J1BXA7 (uncharacterized protein LOC111006488 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111006488 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 7.7e-73
Identity = 172/260 (66.15%), Postives = 193/260 (74.23%), Query Frame = 0

Query: 1   MESQKRNLRARKPLSDCTNTVLSSQSSASNLSAAIKPRKRVIKSAVKHSVSNKKKGESSA 60
           ME+ KRNLRARKPLSDCTNTVLSSQSSASN S+ IKPR+RVIKSAVK +V+N+KKGESS 
Sbjct: 1   MEAPKRNLRARKPLSDCTNTVLSSQSSASNFSSVIKPRRRVIKSAVKDAVNNEKKGESSF 60

Query: 61  VSVSTSVHLQAPNPSSDFAPKEPNPTSDSRPTEP-------------------------- 120
            S S S++LQA NPSSD  P EPNP+SD  PTEP                          
Sbjct: 61  TSASASLNLQASNPSSDCLPTEPNPSSDCLPTEPNSSSDCLPTEPNASSDCLPTEPNASS 120

Query: 121 --------SSSLPPIVEASTPLRRADLPSTSGTDTVSEPQSFYSRRNPTNKRKSVEIEFT 180
                   SSSLP   EASTP RRADLPS+SGTD VSEPQSFYSRR+PTNKRKS EI FT
Sbjct: 121 DCLPTEPSSSSLP--AEASTPTRRADLPSSSGTDRVSEPQSFYSRRHPTNKRKSTEIAFT 180

Query: 181 PFVFSSASKIQTRAEERNEYCSTFKARTVPYKKRQCTTKYGED-AKIELPREFVEQQKAY 226
           PF+F++ASKI T  E+R+ Y S  KARTVP KKRQ  T YG+D +KIELPREFVE+QKAY
Sbjct: 181 PFIFATASKIHTMGEKRDGYSSPSKARTVPCKKRQRGTIYGKDESKIELPREFVEKQKAY 240

BLAST of Sed0025520 vs. ExPASy TrEMBL
Match: A0A6J1JRU8 (uncharacterized protein LOC111487776 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487776 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 1.1e-71
Identity = 169/235 (71.91%), Postives = 186/235 (79.15%), Query Frame = 0

Query: 1   MESQKRNLRARKPLSDCTNTVLSSQSSASNLSAAIKPRKRVIKSAVKHSVSNKKKGESSA 60
           MESQKRNLR RKPL+DCTNTVLSSQSSASNLSAAIKPRKRV+K AVK  V+N+K+G SS 
Sbjct: 1   MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKPAVKDVVNNEKEGVSSF 60

Query: 61  VSVSTSVHLQAPNPSSDFAPKEPN---------PTSDSRPTEPSSSLPPIVEASTPLRRA 120
            S STSV+LQA NPSSDF P +P+         PTSDS PTEPSSS  P  E STP R  
Sbjct: 61  ASASTSVNLQASNPSSDFLPTQPSSNLPPAESTPTSDSLPTEPSSSSLP-AEVSTPSRLV 120

Query: 121 DLPSTSGTDTVSEPQSFYSRRNPTNKRKSVEIEFTPFVFSSASKIQTRAEERNEYCSTFK 180
           DLPS+SGTD V EPQSFYSRR+P N+RKS E    PFVFS+ASKI TR E+R    S  +
Sbjct: 121 DLPSSSGTDRVPEPQSFYSRRHPANRRKSTETAAAPFVFSTASKILTRGEKRAADSSPSR 180

Query: 181 ARTVPYKKRQCTTKYGED-AKIELPREFVEQQKAYFSEVDAFELLVEEAKSSDSE 226
           ARTVPY+KRQ  T YGED +KIELPREFVE+QKAYFSEVDAFELLVEEAKSSDSE
Sbjct: 181 ARTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE 234

BLAST of Sed0025520 vs. ExPASy TrEMBL
Match: A0A6J1GKJ2 (uncharacterized protein LOC111455207 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455207 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.9e-71
Identity = 167/235 (71.06%), Postives = 187/235 (79.57%), Query Frame = 0

Query: 1   MESQKRNLRARKPLSDCTNTVLSSQSSASNLSAAIKPRKRVIKSAVKHSVSNKKKGESSA 60
           MESQKRNLR RKPL+DCTNTVLSSQSSASNLSAAIKPRKRV+KSAVK  V+N+K+G SS 
Sbjct: 1   MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKSAVKDVVNNEKEGVSSL 60

Query: 61  VSVSTSVHLQAPNPSSDFAPKEP---------NPTSDSRPTEPSSSLPPIVEASTPLRRA 120
            S STSV+LQA NPSS+F P +P         NP+SDS PTEPSSS  P  E STP R  
Sbjct: 61  ASASTSVNLQASNPSSEFLPTQPSSNLPPAESNPSSDSLPTEPSSSSVP-AEVSTPSRFV 120

Query: 121 DLPSTSGTDTVSEPQSFYSRRNPTNKRKSVEIEFTPFVFSSASKIQTRAEERNEYCSTFK 180
           DLPS+SGTD V EPQSFYSRR+P N+RKS E    PF+FS+ASKI +R E+R    S  +
Sbjct: 121 DLPSSSGTDRVPEPQSFYSRRHPANRRKSTETAAAPFIFSTASKILSRGEKRAADSSPSR 180

Query: 181 ARTVPYKKRQCTTKYGED-AKIELPREFVEQQKAYFSEVDAFELLVEEAKSSDSE 226
           ARTVPY+KRQ  T YGED +KIELPREFVE+QKAYFSEVDAFELLVEEAKSSDSE
Sbjct: 181 ARTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE 234

BLAST of Sed0025520 vs. ExPASy TrEMBL
Match: A0A6J1C164 (uncharacterized protein LOC111006488 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006488 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 4.7e-70
Identity = 172/273 (63.00%), Postives = 193/273 (70.70%), Query Frame = 0

Query: 1   MESQKRNLRARKPLSDCTNTVLSSQSSASNLSAAIKPRKRVIKSAVKHSVSNKKKGESSA 60
           ME+ KRNLRARKPLSDCTNTVLSSQSSASN S+ IKPR+RVIKSAVK +V+N+KKGESS 
Sbjct: 1   MEAPKRNLRARKPLSDCTNTVLSSQSSASNFSSVIKPRRRVIKSAVKDAVNNEKKGESSF 60

Query: 61  VSVSTSVHLQAPNPSSDFAPKEPNPTSDSRPTEP-------------------------- 120
            S S S++LQA NPSSD  P EPNP+SD  PTEP                          
Sbjct: 61  TSASASLNLQASNPSSDCLPTEPNPSSDCLPTEPNSSSDCLPTEPNASSDCLPTEPNASS 120

Query: 121 --------SSSLPPIVEASTPLRRADLPSTSGTDTVSEPQSFYSRRNPTNKRKSVEIEFT 180
                   SSSLP   EASTP RRADLPS+SGTD VSEPQSFYSRR+PTNKRKS EI FT
Sbjct: 121 DCLPTEPSSSSLP--AEASTPTRRADLPSSSGTDRVSEPQSFYSRRHPTNKRKSTEIAFT 180

Query: 181 PFVFSSASKIQTRAEERNEYCSTFKARTVPYKK-------------RQCTTKYGED-AKI 226
           PF+F++ASKI T  E+R+ Y S  KARTVP KK             RQ  T YG+D +KI
Sbjct: 181 PFIFATASKIHTMGEKRDGYSSPSKARTVPCKKQNMYSDLSPRNVMRQRGTIYGKDESKI 240

BLAST of Sed0025520 vs. ExPASy TrEMBL
Match: A0A6J1JPQ1 (cell wall protein RBR3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487776 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 6.8e-69
Identity = 167/235 (71.06%), Postives = 184/235 (78.30%), Query Frame = 0

Query: 1   MESQKRNLRARKPLSDCTNTVLSSQSSASNLSAAIKPRKRVIKSAVKHSVSNKKKGESSA 60
           MESQKRNLR RKPL+DCTNTVLSSQSSASNLSAAIKPRKRV+K AVK  V+N+K+G SS 
Sbjct: 1   MESQKRNLRVRKPLADCTNTVLSSQSSASNLSAAIKPRKRVVKPAVKDVVNNEKEGVSSF 60

Query: 61  VSVSTSVHLQAPNPSSDFAPKEPN---------PTSDSRPTEPSSSLPPIVEASTPLRRA 120
            S STSV+LQA NPSSDF P +P+         PTSDS PTEPSSS  P  E STP R  
Sbjct: 61  ASASTSVNLQASNPSSDFLPTQPSSNLPPAESTPTSDSLPTEPSSSSLP-AEVSTPSRLV 120

Query: 121 DLPSTSGTDTVSEPQSFYSRRNPTNKRKSVEIEFTPFVFSSASKIQTRAEERNEYCSTFK 180
           DLPS+S  D V EPQSFYSRR+P N+RKS E    PFVFS+ASKI TR E+R    S  +
Sbjct: 121 DLPSSS--DRVPEPQSFYSRRHPANRRKSTETAAAPFVFSTASKILTRGEKRAADSSPSR 180

Query: 181 ARTVPYKKRQCTTKYGED-AKIELPREFVEQQKAYFSEVDAFELLVEEAKSSDSE 226
           ARTVPY+KRQ  T YGED +KIELPREFVE+QKAYFSEVDAFELLVEEAKSSDSE
Sbjct: 181 ARTVPYRKRQRGTIYGEDESKIELPREFVEKQKAYFSEVDAFELLVEEAKSSDSE 232

BLAST of Sed0025520 vs. TAIR 10
Match: AT3G56250.1 (unknown protein; Has 109 Blast hits to 83 proteins in 41 species: Archae - 0; Bacteria - 6; Metazoa - 18; Fungi - 20; Plants - 21; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). )

HSP 1 Score: 59.3 bits (142), Expect = 4.6e-09
Identity = 77/231 (33.33%), Postives = 110/231 (47.62%), Query Frame = 0

Query: 11  RKPLSDCTNTV-LSSQSSASNLSAAIKPRKRVIKSAVKHSVSNKKKGESSAVSVSTSVHL 70
           RKPL+DCTNTV  SSQ S+S++  A       +K  V+ +   +K  +   V+ S +   
Sbjct: 13  RKPLADCTNTVSRSSQQSSSSVKFANPSLTSSLKRLVEQTTLKEKPKD---VNTSATAPE 72

Query: 71  QAPNPSSDFAPKEPNPTSDSRPTEPSSSLPPIVEASTPLRRADLPSTSGTD------TVS 130
            A  P           T+D RP     S      AS P R    P TS +D        +
Sbjct: 73  IASRPI----------TTDVRPVTRRMSADLASPASAPSR----PQTSRSDMGVSDKDFT 132

Query: 131 EPQSFYS-RRNPTNKRKSVEIEFTPFV-------FSSASKIQTRAEERNEYCSTFKARTV 190
           EP S Y+ RR  + +++S +   +           SS+S  +TR    N+     K   V
Sbjct: 133 EPWSVYTVRRKASGQKRSKDASSSTSAAARIRLDLSSSSGKKTRQASENKK----KTLKV 192

Query: 191 PYKKRQCTTKY-GEDAKIELPREFVEQQKAYFSEVDAFELLVEEAKSSDSE 226
             KKRQ T K   ED      ++++E+QKAYF+E+DAFEL VEE  +SDS+
Sbjct: 193 APKKRQRTVKQEKEDPVSAACQDYIEKQKAYFAEIDAFELPVEEVSNSDSD 222

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022134150.11.6e-7266.15uncharacterized protein LOC111006488 isoform X3 [Momordica charantia][more]
XP_022991070.12.3e-7171.91uncharacterized protein LOC111487776 isoform X1 [Cucurbita maxima][more]
XP_022952551.13.9e-7171.06uncharacterized protein LOC111455207 isoform X1 [Cucurbita moschata] >KAG6602594... [more]
XP_023515045.11.1e-7070.64uncharacterized protein LOC111779162 isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_038884349.15.7e-7070.64uncharacterized protein LOC120075210 isoform X3 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1BXA77.7e-7366.15uncharacterized protein LOC111006488 isoform X3 OS=Momordica charantia OX=3673 G... [more]
A0A6J1JRU81.1e-7171.91uncharacterized protein LOC111487776 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1GKJ21.9e-7171.06uncharacterized protein LOC111455207 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1C1644.7e-7063.00uncharacterized protein LOC111006488 isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A6J1JPQ16.8e-6971.06cell wall protein RBR3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1114877... [more]
Match NameE-valueIdentityDescription
AT3G56250.14.6e-0933.33unknown protein; Has 109 Blast hits to 83 proteins in 41 species: Archae - 0; Ba... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..136
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 55..73
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 110..134
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..33
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 80..102
NoneNo IPR availablePANTHERPTHR35740:SF1OS12G0111700 PROTEINcoord: 2..225
NoneNo IPR availablePANTHERPTHR35740OS12G0111700 PROTEINcoord: 2..225

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0025520.1Sed0025520.1mRNA