Sed0025487 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAGCAACCAAAGAGAAACCCACAAATTCAAAATGCTATCTGCTTCTTCCCCTCTAACCACTCTTCCGCCTCTTCCGGCCAGATCCTCCCCTCCGGAACTCACACGTGTCAGATTCCGGCCGCCGCAGGCCATCTCTGCCACCGCCACCGCTTACTCCGCCACCAGAGAGGACTCCGCCTCGCCGTATCTCAGCCTTCAACGAATGGCCTCCTCCGCTTCGCTCTACGACGTCCTCGAAATCCCTAACAGAGCTTCTTTCCAGGAAATCAAATCGGCGTACCGACGCCTCGCCCGAGTTCTCCATCCCGACGTGGCGGCGGCCGGCCACCGGAAAGACTCCTCCGCCACCGATTTCATCCAGATCCAAGCCGCCTACTCCACTCTCTCCGATCCTCAGAAACGCGCCGACTACGATCGGAAGCTTCTCCGCCGCTTCCGCCCTGTGGCTTCCGTCCGGATGGCTTCTGGATTCACCGGCTACACTCGCCGGAACTGGGAGACAGACCAGTGCTGGTAGTCACTTGAATCGACGGATACTGTGAGTTCATCGGAGGAAATTAAGGTTACCGATCCACAGCGCCTGAATCTAAATATGAATCGGAATCACTGGCGTGATTTGTACATATCAGGACATAATCGAAACGGCGCAAAGGATTTGAGACTTGCTAGGATGATACATCCATGGATGGAAGCTTTTGTGCAACTCTATTGTTTTACACTCACATTGAGCAAGTAAAAACTAAGCAAAGGAAAATTAATTATATCTTTTCTCACAGTTTTCCTTTTCTTATCTGTATTTTTCTTGGCTTTTGTGCAGTTTCTATTCCGATGAAATAAAATGATAGAATATCTAACGCTCCCTTAA CAGCAACCAAAGAGAAACCCACAAATTCAAAATGCTATCTGCTTCTTCCCCTCTAACCACTCTTCCGCCTCTTCCGGCCAGATCCTCCCCTCCGGAACTCACACGTGTCAGATTCCGGCCGCCGCAGGCCATCTCTGCCACCGCCACCGCTTACTCCGCCACCAGAGAGGACTCCGCCTCGCCGTATCTCAGCCTTCAACGAATGGCCTCCTCCGCTTCGCTCTACGACGTCCTCGAAATCCCTAACAGAGCTTCTTTCCAGGAAATCAAATCGGCGTACCGACGCCTCGCCCGAGTTCTCCATCCCGACGTGGCGGCGGCCGGCCACCGGAAAGACTCCTCCGCCACCGATTTCATCCAGATCCAAGCCGCCTACTCCACTCTCTCCGATCCTCAGAAACGCGCCGACTACGATCGGAAGCTTCTCCGCCGCTTCCGCCCTGTGGCTTCCGTCCGGATGGCTTCTGGATTCACCGGCTACACTCGCCGGAACTGGGAGACAGACCAGTGCTGGTAGTCACTTGAATCGACGGATACTGTGAGTTCATCGGAGGAAATTAAGGTTACCGATCCACAGCGCCTGAATCTAAATATGAATCGGAATCACTGGCGTGATTTGTACATATCAGGACATAATCGAAACGGCGCAAAGGATTTGAGACTTGCTAGGATGATACATCCATGGATGGAAGCTTTTGTGCAACTCTATTGTTTTACACTCACATTGAGCAAGTAAAAACTAAGCAAAGGAAAATTAATTATATCTTTTCTCACAGTTTTCCTTTTCTTATCTGTATTTTTCTTGGCTTTTGTGCAGTTTCTATTCCGATGAAATAAAATGATAGAATATCTAACGCTCCCTTAA ATGCTATCTGCTTCTTCCCCTCTAACCACTCTTCCGCCTCTTCCGGCCAGATCCTCCCCTCCGGAACTCACACGTGTCAGATTCCGGCCGCCGCAGGCCATCTCTGCCACCGCCACCGCTTACTCCGCCACCAGAGAGGACTCCGCCTCGCCGTATCTCAGCCTTCAACGAATGGCCTCCTCCGCTTCGCTCTACGACGTCCTCGAAATCCCTAACAGAGCTTCTTTCCAGGAAATCAAATCGGCGTACCGACGCCTCGCCCGAGTTCTCCATCCCGACGTGGCGGCGGCCGGCCACCGGAAAGACTCCTCCGCCACCGATTTCATCCAGATCCAAGCCGCCTACTCCACTCTCTCCGATCCTCAGAAACGCGCCGACTACGATCGGAAGCTTCTCCGCCGCTTCCGCCCTGTGGCTTCCGTCCGGATGGCTTCTGGATTCACCGGCTACACTCGCCGGAACTGGGAGACAGACCAGTGCTGGTAG MLSASSPLTTLPPLPARSSPPELTRVRFRPPQAISATATAYSATREDSASPYLSLQRMASSASLYDVLEIPNRASFQEIKSAYRRLARVLHPDVAAAGHRKDSSATDFIQIQAAYSTLSDPQKRADYDRKLLRRFRPVASVRMASGFTGYTRRNWETDQCW Homology
BLAST of Sed0025487 vs. NCBI nr
Match: XP_038883841.1 (chaperone protein dnaJ 11, chloroplastic-like [Benincasa hispida]) HSP 1 Score: 250.0 bits (637), Expect = 1.4e-62 Identity = 137/164 (83.54%), Postives = 146/164 (89.02%), Query Frame = 0
BLAST of Sed0025487 vs. NCBI nr
Match: KAG6603908.1 (Chaperone protein dnaJ 11, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034090.1 Chaperone protein dnaJ 11, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 245.0 bits (624), Expect = 4.5e-61 Identity = 134/164 (81.71%), Postives = 144/164 (87.80%), Query Frame = 0
BLAST of Sed0025487 vs. NCBI nr
Match: XP_022978856.1 (chaperone protein dnaJ 11, chloroplastic [Cucurbita maxima]) HSP 1 Score: 244.6 bits (623), Expect = 5.9e-61 Identity = 134/164 (81.71%), Postives = 144/164 (87.80%), Query Frame = 0
BLAST of Sed0025487 vs. NCBI nr
Match: XP_023543054.1 (chaperone protein dnaJ 11, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 243.4 bits (620), Expect = 1.3e-60 Identity = 133/164 (81.10%), Postives = 143/164 (87.20%), Query Frame = 0
BLAST of Sed0025487 vs. NCBI nr
Match: XP_022950872.1 (chaperone protein dnaJ 11, chloroplastic [Cucurbita moschata]) HSP 1 Score: 238.4 bits (607), Expect = 4.2e-59 Identity = 133/164 (81.10%), Postives = 143/164 (87.20%), Query Frame = 0
BLAST of Sed0025487 vs. ExPASy Swiss-Prot
Match: Q9FYB5 (Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATJ11 PE=1 SV=2) HSP 1 Score: 126.3 bits (316), Expect = 3.1e-28 Identity = 77/155 (49.68%), Postives = 100/155 (64.52%), Query Frame = 0
BLAST of Sed0025487 vs. ExPASy Swiss-Prot
Match: P47248 (DnaJ-like protein MG002 OS=Mycoplasma genitalium (strain ATCC 33530 / G-37 / NCTC 10195) OX=243273 GN=MG002 PE=4 SV=2) HSP 1 Score: 65.9 bits (159), Expect = 4.9e-10 Identity = 43/104 (41.35%), Postives = 57/104 (54.81%), Query Frame = 0
BLAST of Sed0025487 vs. ExPASy Swiss-Prot
Match: Q9SDN0 (Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATJ20 PE=1 SV=2) HSP 1 Score: 65.5 bits (158), Expect = 6.4e-10 Identity = 42/106 (39.62%), Postives = 58/106 (54.72%), Query Frame = 0
BLAST of Sed0025487 vs. ExPASy Swiss-Prot
Match: Q50312 (DnaJ-like protein MG002 homolog OS=Mycoplasma pneumoniae (strain ATCC 29342 / M129) OX=272634 GN=MPN_002 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.4e-09 Identity = 32/69 (46.38%), Postives = 46/69 (66.67%), Query Frame = 0
BLAST of Sed0025487 vs. ExPASy Swiss-Prot
Match: Q5WHG0 (Chaperone protein DnaJ OS=Bacillus clausii (strain KSM-K16) OX=66692 GN=dnaJ PE=3 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.4e-09 Identity = 31/70 (44.29%), Postives = 46/70 (65.71%), Query Frame = 0
BLAST of Sed0025487 vs. ExPASy TrEMBL
Match: A0A6J1IP70 (chaperone protein dnaJ 11, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111478685 PE=4 SV=1) HSP 1 Score: 244.6 bits (623), Expect = 2.9e-61 Identity = 134/164 (81.71%), Postives = 144/164 (87.80%), Query Frame = 0
BLAST of Sed0025487 vs. ExPASy TrEMBL
Match: A0A6J1GG35 (chaperone protein dnaJ 11, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111453840 PE=4 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 2.0e-59 Identity = 133/164 (81.10%), Postives = 143/164 (87.20%), Query Frame = 0
BLAST of Sed0025487 vs. ExPASy TrEMBL
Match: A0A5A7SKL2 (Chaperone protein dnaJ 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001260 PE=4 SV=1) HSP 1 Score: 236.9 bits (603), Expect = 5.9e-59 Identity = 129/164 (78.66%), Postives = 141/164 (85.98%), Query Frame = 0
BLAST of Sed0025487 vs. ExPASy TrEMBL
Match: A0A1S3B225 (chaperone protein dnaJ 11, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103485131 PE=4 SV=1) HSP 1 Score: 236.9 bits (603), Expect = 5.9e-59 Identity = 129/164 (78.66%), Postives = 141/164 (85.98%), Query Frame = 0
BLAST of Sed0025487 vs. ExPASy TrEMBL
Match: A0A6J1EEJ6 (chaperone protein dnaJ 11, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111433507 PE=4 SV=1) HSP 1 Score: 236.5 bits (602), Expect = 7.8e-59 Identity = 131/164 (79.88%), Postives = 140/164 (85.37%), Query Frame = 0
BLAST of Sed0025487 vs. TAIR 10
Match: AT4G36040.1 (Chaperone DnaJ-domain superfamily protein ) HSP 1 Score: 126.3 bits (316), Expect = 2.2e-29 Identity = 77/155 (49.68%), Postives = 100/155 (64.52%), Query Frame = 0
BLAST of Sed0025487 vs. TAIR 10
Match: AT2G17880.1 (Chaperone DnaJ-domain superfamily protein ) HSP 1 Score: 121.7 bits (304), Expect = 5.4e-28 Identity = 74/157 (47.13%), Postives = 100/157 (63.69%), Query Frame = 0
BLAST of Sed0025487 vs. TAIR 10
Match: AT3G13310.1 (Chaperone DnaJ-domain superfamily protein ) HSP 1 Score: 82.4 bits (202), Expect = 3.6e-16 Identity = 56/133 (42.11%), Postives = 75/133 (56.39%), Query Frame = 0
BLAST of Sed0025487 vs. TAIR 10
Match: AT4G13830.1 (DNAJ-like 20 ) HSP 1 Score: 65.5 bits (158), Expect = 4.6e-11 Identity = 42/106 (39.62%), Postives = 58/106 (54.72%), Query Frame = 0
BLAST of Sed0025487 vs. TAIR 10
Match: AT4G13830.2 (DNAJ-like 20 ) HSP 1 Score: 65.5 bits (158), Expect = 4.6e-11 Identity = 42/106 (39.62%), Postives = 58/106 (54.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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