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Sed0025479 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAACGGCAAGGCTCCGTCGCCGGTGACTCTGCTGGAGCGCCTCCGTGAGGCCGTGTTTCGTTTCATAATGCTCTGTGCTTTTTCAAAGGCCTCAAATCACCATCGCAGCCATCCCGCCGGAGCTGGTTTCCCGGCCGATGATGACGTCATGAGGCGGCGGCACTCGTACCAAAACGCCGACCACCACCACAGCGAGGCCGTCGCCGATTGCATCGAGTTTATTAAGAAGAAGGCGTATTCCGACCACGAGGTGATGTGGATCGACGGACGCCAATGCTGACGTGGCCACGG ATGAAGAACGGCAAGGCTCCGTCGCCGGTGACTCTGCTGGAGCGCCTCCGTGAGGCCGTGTTTCGTTTCATAATGCTCTGTGCTTTTTCAAAGGCCTCAAATCACCATCGCAGCCATCCCGCCGGAGCTGGTTTCCCGGCCGATGATGACGTCATGAGGCGGCGGCACTCGTACCAAAACGCCGACCACCACCACAGCGAGGCCGTCGCCGATTGCATCGAGTTTATTAAGAAGAAGGCGTATTCCGACCACGAGGTGATGTGGATCGACGGACGCCAATGCTGACGTGGCCACGG ATGAAGAACGGCAAGGCTCCGTCGCCGGTGACTCTGCTGGAGCGCCTCCGTGAGGCCGTGTTTCGTTTCATAATGCTCTGTGCTTTTTCAAAGGCCTCAAATCACCATCGCAGCCATCCCGCCGGAGCTGGTTTCCCGGCCGATGATGACGTCATGAGGCGGCGGCACTCGTACCAAAACGCCGACCACCACCACAGCGAGGCCGTCGCCGATTGCATCGAGTTTATTAAGAAGAAGGCGTATTCCGACCACGAGGTGATGTGGATCGACGGACGCCAATGCTGA MKNGKAPSPVTLLERLREAVFRFIMLCAFSKASNHHRSHPAGAGFPADDDVMRRRHSYQNADHHHSEAVADCIEFIKKKAYSDHEVMWIDGRQC Homology
BLAST of Sed0025479 vs. NCBI nr
Match: KAA0025678.1 (Transducin/WD40 repeat-like superfamily protein [Cucumis melo var. makuwa] >TYK12553.1 Transducin/WD40 repeat-like superfamily protein [Cucumis melo var. makuwa]) HSP 1 Score: 129.8 bits (325), Expect = 1.2e-26 Identity = 69/92 (75.00%), Postives = 74/92 (80.43%), Query Frame = 0
BLAST of Sed0025479 vs. NCBI nr
Match: KAG6603914.1 (hypothetical protein SDJN03_04523, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 127.9 bits (320), Expect = 4.7e-26 Identity = 65/87 (74.71%), Postives = 71/87 (81.61%), Query Frame = 0
BLAST of Sed0025479 vs. NCBI nr
Match: KGN49339.2 (hypothetical protein Csa_003207 [Cucumis sativus]) HSP 1 Score: 125.6 bits (314), Expect = 2.3e-25 Identity = 65/86 (75.58%), Postives = 70/86 (81.40%), Query Frame = 0
BLAST of Sed0025479 vs. NCBI nr
Match: KAF9682207.1 (hypothetical protein SADUNF_Sadunf05G0084600 [Salix dunnii]) HSP 1 Score: 89.7 bits (221), Expect = 1.4e-14 Identity = 47/78 (60.26%), Postives = 55/78 (70.51%), Query Frame = 0
BLAST of Sed0025479 vs. NCBI nr
Match: KAG8478177.1 (hypothetical protein CXB51_027971 [Gossypium anomalum]) HSP 1 Score: 87.8 bits (216), Expect = 5.4e-14 Identity = 49/79 (62.03%), Postives = 55/79 (69.62%), Query Frame = 0
BLAST of Sed0025479 vs. ExPASy TrEMBL
Match: A0A5A7SHP0 (Transducin/WD40 repeat-like superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001350 PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 6.0e-27 Identity = 69/92 (75.00%), Postives = 74/92 (80.43%), Query Frame = 0
BLAST of Sed0025479 vs. ExPASy TrEMBL
Match: A0A0A0KGN3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G505880 PE=4 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 1.1e-25 Identity = 65/86 (75.58%), Postives = 70/86 (81.40%), Query Frame = 0
BLAST of Sed0025479 vs. ExPASy TrEMBL
Match: A0A7J8XH78 (Uncharacterized protein OS=Gossypium aridum OX=34290 GN=Goari_014215 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 2.6e-14 Identity = 49/79 (62.03%), Postives = 53/79 (67.09%), Query Frame = 0
BLAST of Sed0025479 vs. ExPASy TrEMBL
Match: A0A5D2NDI0 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A11G199100v1 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 4.4e-14 Identity = 49/79 (62.03%), Postives = 54/79 (68.35%), Query Frame = 0
BLAST of Sed0025479 vs. ExPASy TrEMBL
Match: A0A1U8K2Y4 (uncharacterized protein LOC107912997 OS=Gossypium hirsutum OX=3635 GN=LOC107912997 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 4.4e-14 Identity = 49/79 (62.03%), Postives = 54/79 (68.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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